F319634

General Info

Members Datasets Scaffolds Average Seq Length
209 165 194 413

Family's Representative Sequence

Representative Sequence 3300049588|Ga0501072_0033299|Ga0501072_0033299_1775_3010
Length 411
Sequence MPAFDIVVRRARLRGRKALHDIAIAGGRIAAIAENLAGSSSHELDAGGGLATESFVNPHLHLCKVYTLFMTDDAAARAYHGAGMRDAMSAIELAARVKEKYDERWIIRNVRRALSLAALYGTTHVRALADVDSKARLEGVKALLRAREEFRGVLDVQVVAFAQDGLAREPGAAELMREAMALGADVVGGIPWIEQDKASHIGFCFDLAREFDRDVSMLVDDSGNAELRTLEAMAAEALKRGWQGRALAHHARAMALYSDSELGNVAELMRKARTSLVTDPHTGPLHARVKELLAAGVNVCLGQDDISDSYYPFGRNNMLEVAFLAAHLLWMTSRAEMETLYDMITTRAAQAINIGPHRLEAGAPANLVVLKEENILEALREHAVPAALVSHGRLVDQAKMRSFSTNEAGAV

Samples

Sample ID Description Type Environment
1 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
2 2508501128 Bradyrhizobium sp. ARR65 Isolate Nodule
3 2511231028 Bradyrhizobium sp. YR681 Isolate Rhizosphere
4 2513237095 Bradyrhizobium diazoefficiens USDA 122 Isolate Nodule
5 2513237098 Bradyrhizobium elkanii WSM2783 Isolate Nodule
6 2513237141 Bradyrhizobium sp. TV2a.2 Isolate Nodule
7 2517093001 Bradyrhizobium japonicum USDA 124 Isolate Nodule
8 2524023210 Bradyrhizobium sp. Ai1a-2 Isolate Nodule
9 2816332527 Bradyrhizobium diazoefficiens Y21 Isolate Nodule
10 2841957949 Bradyrhizobium sp. CIR1 Isolate Nodule
11 2885383462 Bradyrhizobium sp. Leo170 Isolate Unclassified
12 2888378607 Bradyrhizobium sp. LCT2 Isolate Unclassified
13 2903768456 Bradyrhizobium sp. Leo121 Isolate Unclassified
14 3005710791 Bradyrhizobium genosp. B BDV5040 Isolate Unclassified
15 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
16 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
17 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
18 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
19 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
20 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
21 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
22 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
23 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
24 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
25 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
26 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
27 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
28 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
29 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
30 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
31 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
32 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
33 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
34 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
35 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
36 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
37 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
38 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
39 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
40 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
41 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
42 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
43 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
44 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
45 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
46 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
47 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
48 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
49 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
50 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
51 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
65 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
66 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
67 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
68 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
69 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
70 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
71 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
72 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
73 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
74 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
75 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
76 3300036459 Metatranscriptome of spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRE5 (Metagenome Metatranscriptome) Metatranscriptome Unclassified
77 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
78 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
79 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
80 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
81 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
82 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
83 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
84 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
85 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
86 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
87 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
88 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
89 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
90 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
91 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
92 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
93 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
94 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
95 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
96 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
97 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
98 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
99 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
100 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
101 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
102 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
103 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
104 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
105 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
106 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
107 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
108 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
109 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
110 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
111 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
112 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
113 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
114 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
115 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
116 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
117 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
118 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
119 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
120 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
121 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
122 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
123 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
124 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
125 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
126 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
127 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
128 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
129 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
130 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
131 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
132 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
133 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
134 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
135 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
136 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
137 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
138 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
139 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
140 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
141 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
142 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
143 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
144 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
145 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
146 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
147 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
148 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
149 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
150 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
151 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
152 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
153 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
154 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
155 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
156 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
157 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
158 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
159 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
160 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
161 3300053731 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 endosphere Metagenome Endosphere
162 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
163 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
164 8016583857 Bradyrhizobium sp. LM2.7 Isolate Nodule
165 8056967851 Bradyrhizobium zhengyangense WYCCWR 12678 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 92.34
Metatranscriptomes 0.48
Isolates 7.18

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 11.96
Nodule 4.78
Rhizoplane 6.7
Rhizosphere 73.68
Stem 0
Stem Tuber 0
Unclassified 2.87

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 SwRhRL2b_contig_763623 2162886007 Bacteria 17409
2 Ga0065704_10070420 3300005289 Bacteria 25684
3 Ga0065707_10081918 3300005295 Bacteria 29618
4 Ga0070666_10046581 3300005335 Bacteria 2909
5 Ga0070668_100082586 3300005347 Bacteria 2520
6 Ga0070671_100005832 3300005355 Bacteria 9810
7 Ga0070671_100045127 3300005355 Bacteria 3663
8 Ga0070673_100085671 3300005364 Bacteria 2566
9 Ga0070709_10036932 3300005434 Bacteria 2980
10 Ga0070714_100096110 3300005435 Bacteria 2602
11 Ga0070714_100239505 3300005435 Bacteria 1674
12 Ga0070713_100064005 3300005436 Bacteria 3085
13 Ga0070701_10102806 3300005438 Unclassified 1585
14 Ga0070711_100108720 3300005439 Bacteria 2032
15 Ga0070705_100068110 3300005440 Bacteria 2141
16 Ga0070700_100093215 3300005441 Unclassified 1970
17 Ga0070698_100117849 3300005471 Bacteria 2617
18 Ga0070698_100172188 3300005471 Bacteria 2105
19 Ga0070699_100018876 3300005518 Bacteria 5927
20 Ga0070699_100069193 3300005518 Bacteria 3067
21 Ga0070699_100110575 3300005518 Bacteria 2412
22 Ga0070696_100041851 3300005546 Bacteria 3167
23 Ga0070704_100009604 3300005549 Bacteria 5857
24 Ga0070704_100039319 3300005549 Bacteria 3247
25 Ga0068859_100048596 3300005617 Bacteria 4261
26 Ga0068862_100120023 3300005844 Unclassified 2317
27 Ga0081540_1000443 3300005983 Bacteria 40947
28 Ga0081539_10009271 3300005985 Bacteria 8274
29 Ga0070717_10017328 3300006028 Bacteria 5604
30 Ga0075363_100005267 3300006048 Bacteria 5738
31 Ga0075364_10007860 3300006051 Bacteria 6348
32 Ga0070716_100076420 3300006173 Bacteria 1984
33 Ga0075367_10020234 3300006178 Bacteria 3702
34 Ga0075367_10035056 3300006178 Bacteria 2902
35 Ga0075366_10016927 3300006195 Bacteria 4190
36 Ga0075366_10043222 3300006195 Bacteria 2669
37 Ga0075431_100017471 3300006847 Bacteria 7292
38 Ga0075431_100086910 3300006847 Unclassified 3227
39 Ga0097620_100048597 3300006931 Bacteria 4261
40 Ga0105247_10057865 3300009101 Bacteria 2397
41 Ga0114129_10002393 3300009147 Bacteria 26068
42 Ga0114129_10011180 3300009147 Bacteria 12798
43 Ga0114129_10062314 3300009147 Bacteria 5210
44 Ga0114129_10085763 3300009147 Bacteria 4368
45 Ga0114129_10229485 3300009147 Bacteria 2501
46 Ga0114129_10567849 3300009147 Bacteria 1473
47 Ga0105248_10033424 3300009177 Bacteria 5746
48 Ga0105248_10399673 3300009177 Bacteria 1547
49 Ga0105237_10146178 3300009545 Bacteria 2359
50 Ga0163163_10069103 3300014325 Bacteria 3516
51 Ga0209148_1000445 3300025254 Bacteria 45388
52 Ga0209455_1011652 3300025272 Bacteria 2151
53 Ga0207680_10024711 3300025903 Bacteria 3302
54 Ga0207647_10007936 3300025904 Bacteria 7631
55 Ga0207671_10082247 3300025914 Bacteria 2416
56 Ga0207663_10076911 3300025916 Bacteria 2170
57 Ga0207700_10025064 3300025928 Bacteria 4136
58 Ga0207664_10250873 3300025929 Bacteria 1544
59 Ga0207644_10046654 3300025931 Bacteria 3088
60 Ga0207706_10085209 3300025933 Bacteria 2778
61 Ga0207709_10049562 3300025935 Bacteria 2564
62 Ga0207711_10172078 3300025941 Bacteria 1965
63 Ga0207651_10004072 3300025960 Bacteria 7286
64 Ga0207668_10063190 3300025972 Bacteria 2611
65 Ga0268265_10169176 3300028380 Bacteria 1866
66 Ga0265323_10024566 3300028653 Bacteria 2290
67 Ga0265328_10020093 3300031239 Unclassified 2559
68 Ga0265325_10029900 3300031241 Bacteria 2925
69 Ga0265325_10032383 3300031241 Bacteria 2791
70 Ga0265340_10039284 3300031247 Bacteria 2336
71 Ga0265316_10042273 3300031344 Unclassified 3644
72 Ga0265313_10017243 3300031595 Bacteria 4112
73 Ga0373923_0002223 3300035111 Bacteria 5910
74 Ga0373956_0058806 3300035119 Bacteria 1738
75 Ga0373943_0010582 3300035170 Bacteria 4137
76 Ga0373955_0005269 3300035172 Bacteria 5804
77 Ga0373933_0000746 3300035724 Bacteria 19870
78 Ga0373937_0000413 3300036401 Bacteria 39908
79 Ga0372808_011887 3300036459 Bacteria 1233
80 Ga0316584_0018474 3300036712 Bacteria 5031
81 Ga0373925_0106146 3300037068 Bacteria 2165
82 Ga0436361_0095186 3300039447 Bacteria 3425
83 Ga0451577_0169375 3300042876 Bacteria 1968
84 Ga0466972_0012012 3300044658 Bacteria 4351
85 Ga0453683_0085919 3300044673 Unclassified 1971
86 Ga0453684_0000047 3300044712 Bacteria 560243
87 Ga0453684_0134525 3300044712 Bacteria 2962
88 Ga0466959_0042900 3300045049 Bacteria 3336
89 Ga0451576_0061240 3300045051 Bacteria 3925
90 Ga0495592_0000629 3300046454 Bacteria 24609
91 Ga0495629_0008241 3300046459 Bacteria 7662
92 Ga0495638_0130523 3300046460 Bacteria 1476
93 Ga0495651_0000319 3300046462 Bacteria 37294
94 Ga0495651_0008081 3300046462 Bacteria 8067
95 Ga0495653_0000391 3300046463 Bacteria 35079
96 Ga0495664_0007411 3300046477 Bacteria 6092
97 Ga0495608_0000916 3300046511 Bacteria 20676
98 Ga0495610_0006739 3300046512 Bacteria 7804
99 Ga0495618_0005397 3300046514 Bacteria 7799
100 Ga0495628_0006786 3300046516 Bacteria 9956
101 Ga0495628_0210316 3300046516 Bacteria 1463
102 Ga0495652_0001170 3300046529 Bacteria 29592
103 Ga0495587_0001521 3300046536 Bacteria 15413
104 Ga0495597_0007697 3300046542 Bacteria 5447
105 Ga0495667_0016785 3300046559 Bacteria 4945
106 Ga0495668_0026104 3300046616 Bacteria 3317
107 Ga0495634_0016225 3300046642 Bacteria 5329
108 Ga0495635_0013159 3300046663 Bacteria 5792
109 Ga0495599_0056084 3300046678 Bacteria 2465
110 Ga0495623_0003474 3300046679 Bacteria 10434
111 Ga0495623_0136174 3300046679 Bacteria 1465
112 Ga0495600_0004265 3300046809 Bacteria 8542
113 Ga0495581_0051827 3300047315 Bacteria 2370
114 Ga0495604_0000580 3300047317 Bacteria 32005
115 Ga0495674_0002826 3300047319 Bacteria 16877
116 Ga0495680_0000636 3300047322 Bacteria 39417
117 Ga0495675_0034184 3300047444 Bacteria 3244
118 Ga0495684_0002834 3300047471 Bacteria 13667
119 Ga0495593_0011221 3300047673 Bacteria 5151
120 Ga0495602_0004623 3300048088 Bacteria 14359
121 Ga0496100_0058119 3300048903 Bacteria 2537
122 Ga0496101_0066404 3300048904 Bacteria 2631
123 Ga0496103_0024360 3300048906 Bacteria 3653
124 Ga0496104_0001558 3300048907 Bacteria 19746
125 Ga0496105_0044707 3300048908 Bacteria 3653
126 Ga0496108_0020144 3300048911 Bacteria 5481
127 Ga0496109_0021487 3300048912 Bacteria 5708
128 Ga0496109_0208401 3300048912 Bacteria 1838
129 Ga0496110_0200832 3300048913 Bacteria 1811
130 Ga0496111_0128593 3300048914 Bacteria 1873
131 Ga0496112_0096275 3300048915 Bacteria 2930
132 Ga0496112_0265335 3300048915 Bacteria 1666
133 Ga0496113_0382574 3300048916 Bacteria 1129
134 Ga0496115_0026722 3300048918 Bacteria 4508
135 Ga0496126_0043733 3300048929 Bacteria 4129
136 Ga0501036_0007626 3300049572 Bacteria 8833
137 Ga0501037_0069110 3300049573 Bacteria 2572
138 Ga0501041_0029699 3300049577 Bacteria 3298
139 Ga0501041_0158329 3300049577 Bacteria 1415
140 Ga0501071_0006189 3300049587 Bacteria 7758
141 Ga0501072_0027895 3300049588 Bacteria 4406
142 Ga0501072_0033299 3300049588 Bacteria 4038
143 Ga0501075_0000257 3300049591 Bacteria 28886
144 Ga0501076_0006041 3300049592 Bacteria 8759
145 Ga0501076_0037533 3300049592 Bacteria 3800
146 Ga0501076_0206435 3300049592 Bacteria 1605
147 Ga0501076_0287353 3300049592 Bacteria 1347
148 Ga0501077_0097168 3300049593 Bacteria 1866
149 Ga0501079_0006906 3300049741 Bacteria 8555
150 Ga0501079_0029778 3300049741 Bacteria 4193
151 Ga0501080_0014001 3300049742 Bacteria 7383
152 Ga0501081_0000677 3300049743 Bacteria 19580
153 Ga0501081_0022681 3300049743 Bacteria 4202
154 Ga0501081_0134460 3300049743 Bacteria 1769
155 Ga0501035_0070532 3300049822 Bacteria 3095
156 Ga0501045_0026416 3300049824 Bacteria 4176
157 Ga0501045_0169417 3300049824 Unclassified 1627
158 nmdc:mga0yw44_38875_c1 3300050492 Bacteria 2818
159 nmdc:mga0k408_29171_c1 3300050493 Bacteria 3140
160 nmdc:mga0k408_40913_c1 3300050493 Bacteria 2668
161 nmdc:mga06z11_106067_c1 3300050494 Bacteria 1549
162 nmdc:mga05p37_135025_c1 3300050507 Bacteria 3027
163 nmdc:mga05p37_178380_c1 3300050507 Bacteria 2586
164 nmdc:mga05p37_181561_c1 3300050507 Bacteria 2560
165 nmdc:mga05p37_270108_c1 3300050507 Bacteria 2032
166 nmdc:mga05p37_78509_c1 3300050507 Bacteria 4065
167 nmdc:mga05p37_936_c1 3300050507 Bacteria 32891
168 nmdc:mga09592_139021_c1 3300050508 Bacteria 2093
169 nmdc:mga09592_7493_c1 3300050508 Bacteria 8875
170 nmdc:mga06r32_24586_c1 3300050510 Bacteria 5594
171 nmdc:mga06r32_25231_c1 3300050510 Bacteria 5528
172 nmdc:mga0n895_17829_c1 3300050512 Bacteria 6555
173 nmdc:mga0n895_38172_c1 3300050512 Bacteria 4652
174 Ga0495601_0005912 3300053077 Bacteria 7135
175 Ga0495612_0003895 3300053078 Bacteria 6188
176 Ga0495595_0000112 3300053084 Bacteria 37201
177 Ga0495619_0001541 3300053085 Bacteria 15178
178 Ga0500583_0067357 3300053092 Bacteria 1706
179 Ga0500651_0034349 3300053093 Bacteria 3197
180 Ga0500651_0051967 3300053093 Bacteria 2570
181 Ga0500566_0019757 3300053094 Bacteria 3956
182 Ga0500641_0053719 3300053096 Bacteria 1664
183 Ga0500562_004173 3300053108 Bacteria 3646
184 Ga0500595_000002 3300053119 Bacteria 1074388
185 Ga0500642_0000009 3300053130 Bacteria 286829
186 Ga0500642_0000031 3300053130 Bacteria 114671
187 Ga0500568_0052906 3300053139 Bacteria 1593
188 Ga0500616_0000002 3300053153 Bacteria 1611257
189 Ga0500645_000068 3300053730 Bacteria 81642
190 Ga0500609_003185 3300053731 Bacteria 2319
191 Ga0501084_0001365 3300054114 Bacteria 19306
192 Ga0501084_0125795 3300054114 Unclassified 2157
193 Ga0501082_0005951 3300060353 Bacteria 10583
194 Ga0501082_0073936 3300060353 Bacteria 2935

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300036459 Ga0372808_011887 Ga0372808_011887_179_1198 339
2 3300048916 Ga0496113_0382574 Ga0496113_0382574_21_1040 339
3 3300009177 Ga0105248_10399673 Ga0105248_103996732 343
4 3300048915 Ga0496112_0096275 Ga0496112_0096275_29_1063 344
5 3300049572 Ga0501036_0007626 Ga0501036_0007626_7775_8809 344
6 3300006847 Ga0075431_100086910 Ga0075431_1000869103 388
7 iso_pu_bacteria 2508501128 2509151516 389
8 3300044712 Ga0453684_0000047 Ga0453684_0000047_135609_136790 393
9 3300046616 Ga0495668_0026104 Ga0495668_0026104_1764_3011 394
10 3300039447 Ga0436361_0095186 Ga0436361_0095186_1999_3240 399
11 3300005983 Ga0081540_1000443 Ga0081540_100044310 400
12 3300005518 Ga0070699_100110575 Ga0070699_1001105752 403
13 3300006847 Ga0075431_100017471 Ga0075431_1000174715 403
14 3300050510 nmdc:mga06r32_25231_c1 nmdc:mga06r32_25231_c1_1376_2587 403
15 iso_pu_bacteria 2513237098 2513672063 404
16 iso_pu_bacteria 2524023210 2524463844 405
17 iso_pu_bacteria 2885383462 2885383644 405
18 iso_pu_bacteria 2903768456 2903770121 405
19 iso_pu_bacteria 8016583857 8016589734 407
20 3300028653 Ga0265323_10024566 Ga0265323_100245662 408
21 3300036712 Ga0316584_0018474 Ga0316584_0018474_2177_3406 408
22 3300048929 Ga0496126_0043733 Ga0496126_0043733_1726_2955 408
23 3300050510 nmdc:mga06r32_24586_c1 nmdc:mga06r32_24586_c1_1346_2623 408
24 iso_pu_bacteria 2511231028 2511398539 408
25 iso_pu_bacteria 2513237095 2513648293 408
26 iso_pu_bacteria 2517093001 2517106106 408
27 iso_pu_bacteria 2816332527 2818239868 408
28 iso_pu_bacteria 2841957949 2841963648 408
29 iso_pu_bacteria 2888378607 2888386341 408
30 3300005335 Ga0070666_10046581 Ga0070666_100465812 409
31 3300005355 Ga0070671_100005832 Ga0070671_1000058322 409
32 3300005364 Ga0070673_100085671 Ga0070673_1000856712 409
33 3300006028 Ga0070717_10017328 Ga0070717_100173283 409
34 3300006173 Ga0070716_100076420 Ga0070716_1000764201 409
35 3300025903 Ga0207680_10024711 Ga0207680_100247111 409
36 3300025960 Ga0207651_10004072 Ga0207651_100040726 409
37 3300044658 Ga0466972_0012012 Ga0466972_0012012_2697_3929 409
38 3300048903 Ga0496100_0058119 Ga0496100_0058119_559_1806 409
39 3300048904 Ga0496101_0066404 Ga0496101_0066404_1276_2523 409
40 3300048907 Ga0496104_0001558 Ga0496104_0001558_6798_8030 409
41 3300048908 Ga0496105_0044707 Ga0496105_0044707_926_2158 409
42 3300048912 Ga0496109_0208401 Ga0496109_0208401_214_1446 409
43 3300048915 Ga0496112_0265335 Ga0496112_0265335_53_1285 409
44 3300048918 Ga0496115_0026722 Ga0496115_0026722_663_1895 409
45 3300053092 Ga0500583_0067357 Ga0500583_0067357_183_1415 409
46 3300053096 Ga0500641_0053719 Ga0500641_0053719_126_1358 409
47 3300053139 Ga0500568_0052906 Ga0500568_0052906_120_1352 409
48 3300005518 Ga0070699_100018876 Ga0070699_1000188762 410
49 3300009147 Ga0114129_10085763 Ga0114129_100857632 410
50 3300049588 Ga0501072_0033299 Ga0501072_0033299_1775_3010 410
51 3300050512 nmdc:mga0n895_38172_c1 nmdc:mga0n895_38172_c1_1008_2243 410
52 3300006178 Ga0075367_10020234 Ga0075367_100202342 411
53 3300006195 Ga0075366_10016927 Ga0075366_100169272 411
54 3300044712 Ga0453684_0134525 Ga0453684_0134525_1119_2357 411
55 3300050493 nmdc:mga0k408_29171_c1 nmdc:mga0k408_29171_c1_254_1492 411
56 3300050494 nmdc:mga06z11_106067_c1 nmdc:mga06z11_106067_c1_167_1405 411
57 3300053108 Ga0500562_004173 Ga0500562_004173_260_1495 411
58 3300053130 Ga0500642_0000009 Ga0500642_0000009_123782_125017 411
59 3300005347 Ga0070668_100082586 Ga0070668_1000825861 412
60 3300005355 Ga0070671_100045127 Ga0070671_1000451272 412
61 3300005471 Ga0070698_100117849 Ga0070698_1001178492 412
62 3300005518 Ga0070699_100069193 Ga0070699_1000691932 412
63 3300006048 Ga0075363_100005267 Ga0075363_1000052676 412
64 3300006051 Ga0075364_10007860 Ga0075364_100078605 412
65 3300006178 Ga0075367_10035056 Ga0075367_100350563 412
66 3300006195 Ga0075366_10043222 Ga0075366_100432221 412
67 3300009101 Ga0105247_10057865 Ga0105247_100578653 412
68 3300009147 Ga0114129_10062314 Ga0114129_100623144 412
69 3300009177 Ga0105248_10033424 Ga0105248_100334242 412
70 3300009545 Ga0105237_10146178 Ga0105237_101461783 412
71 3300014325 Ga0163163_10069103 Ga0163163_100691033 412
72 3300025254 Ga0209148_1000445 Ga0209148_100044534 412
73 3300025272 Ga0209455_1011652 Ga0209455_10116522 412
74 3300025904 Ga0207647_10007936 Ga0207647_100079365 412
75 3300025914 Ga0207671_10082247 Ga0207671_100822472 412
76 3300025931 Ga0207644_10046654 Ga0207644_100466542 412
77 3300025941 Ga0207711_10172078 Ga0207711_101720782 412
78 3300025972 Ga0207668_10063190 Ga0207668_100631903 412
79 3300028380 Ga0268265_10169176 Ga0268265_101691762 412
80 3300045049 Ga0466959_0042900 Ga0466959_0042900_1386_2627 412
81 3300046512 Ga0495610_0006739 Ga0495610_0006739_3477_4718 412
82 3300046542 Ga0495597_0007697 Ga0495597_0007697_2483_3724 412
83 3300048906 Ga0496103_0024360 Ga0496103_0024360_1333_2574 412
84 3300048911 Ga0496108_0020144 Ga0496108_0020144_3596_4837 412
85 3300048912 Ga0496109_0021487 Ga0496109_0021487_1037_2278 412
86 3300048913 Ga0496110_0200832 Ga0496110_0200832_164_1405 412
87 3300048914 Ga0496111_0128593 Ga0496111_0128593_426_1667 412
88 3300049577 Ga0501041_0158329 Ga0501041_0158329_100_1341 412
89 3300049592 Ga0501076_0287353 Ga0501076_0287353_63_1304 412
90 3300049593 Ga0501077_0097168 Ga0501077_0097168_528_1769 412
91 3300049741 Ga0501079_0029778 Ga0501079_0029778_528_1769 412
92 3300049743 Ga0501081_0134460 Ga0501081_0134460_414_1655 412
93 3300050492 nmdc:mga0yw44_38875_c1 nmdc:mga0yw44_38875_c1_578_1819 412
94 3300050493 nmdc:mga0k408_40913_c1 nmdc:mga0k408_40913_c1_1065_2309 412
95 3300050507 nmdc:mga05p37_270108_c1 nmdc:mga05p37_270108_c1_345_1589 412
96 3300053093 Ga0500651_0034349 Ga0500651_0034349_1537_2778 412
97 3300053731 Ga0500609_003185 Ga0500609_003185_409_1650 412
98 3300060353 Ga0501082_0073936 Ga0501082_0073936_827_2068 412
99 iso_pu_bacteria 2513237141 2513893417 412
100 iso_pu_bacteria 3005710791 3005716747 412
101 iso_pu_bacteria 8056967851 8056969786 412
102 3300009147 Ga0114129_10002393 Ga0114129_1000239322 413
103 3300009147 Ga0114129_10567849 Ga0114129_105678491 413
104 3300045051 Ga0451576_0061240 Ga0451576_0061240_1196_2437 413
105 3300049573 Ga0501037_0069110 Ga0501037_0069110_723_1967 413
106 3300049577 Ga0501041_0029699 Ga0501041_0029699_1362_2606 413
107 3300049587 Ga0501071_0006189 Ga0501071_0006189_1958_3202 413
108 3300049588 Ga0501072_0027895 Ga0501072_0027895_1786_3030 413
109 3300049591 Ga0501075_0000257 Ga0501075_0000257_9370_10614 413
110 3300049592 Ga0501076_0006041 Ga0501076_0006041_7249_8493 413
111 3300049592 Ga0501076_0206435 Ga0501076_0206435_196_1437 413
112 3300049741 Ga0501079_0006906 Ga0501079_0006906_3556_4800 413
113 3300049742 Ga0501080_0014001 Ga0501080_0014001_1238_2482 413
114 3300049743 Ga0501081_0000677 Ga0501081_0000677_9632_10876 413
115 3300049822 Ga0501035_0070532 Ga0501035_0070532_1012_2256 413
116 3300049824 Ga0501045_0026416 Ga0501045_0026416_1377_2621 413
117 3300050507 nmdc:mga05p37_178380_c1 nmdc:mga05p37_178380_c1_77_1318 413
118 3300050507 nmdc:mga05p37_936_c1 nmdc:mga05p37_936_c1_4401_5642 413
119 3300050508 nmdc:mga09592_7493_c1 nmdc:mga09592_7493_c1_7066_8307 413
120 3300050512 nmdc:mga0n895_17829_c1 nmdc:mga0n895_17829_c1_580_1881 413
121 3300053130 Ga0500642_0000031 Ga0500642_0000031_36443_37690 413
122 3300054114 Ga0501084_0001365 Ga0501084_0001365_1531_2775 413
123 3300054114 Ga0501084_0125795 Ga0501084_0125795_662_1903 413
124 3300060353 Ga0501082_0005951 Ga0501082_0005951_775_2019 413
125 3300005435 Ga0070714_100096110 Ga0070714_1000961103 414
126 3300005438 Ga0070701_10102806 Ga0070701_101028061 414
127 3300005439 Ga0070711_100108720 Ga0070711_1001087202 414
128 3300005441 Ga0070700_100093215 Ga0070700_1000932152 414
129 3300005549 Ga0070704_100039319 Ga0070704_1000393192 414
130 3300005617 Ga0068859_100048596 Ga0068859_1000485963 414
131 3300005844 Ga0068862_100120023 Ga0068862_1001200232 414
132 3300005985 Ga0081539_10009271 Ga0081539_100092713 414
133 3300006931 Ga0097620_100048597 Ga0097620_1000485973 414
134 3300009147 Ga0114129_10011180 Ga0114129_100111807 414
135 3300009147 Ga0114129_10229485 Ga0114129_102294852 414
136 3300025916 Ga0207663_10076911 Ga0207663_100769112 414
137 3300025933 Ga0207706_10085209 Ga0207706_100852091 414
138 3300042876 Ga0451577_0169375 Ga0451577_0169375_25_1269 414
139 3300044673 Ga0453683_0085919 Ga0453683_0085919_348_1592 414
140 3300046460 Ga0495638_0130523 Ga0495638_0130523_179_1441 414
141 3300046462 Ga0495651_0008081 Ga0495651_0008081_5882_7210 414
142 3300046516 Ga0495628_0210316 Ga0495628_0210316_33_1280 414
143 3300046679 Ga0495623_0136174 Ga0495623_0136174_74_1402 414
144 3300049824 Ga0501045_0169417 Ga0501045_0169417_166_1410 414
145 3300050507 nmdc:mga05p37_135025_c1 nmdc:mga05p37_135025_c1_553_1797 414
146 3300050507 nmdc:mga05p37_181561_c1 nmdc:mga05p37_181561_c1_25_1272 414
147 3300050507 nmdc:mga05p37_78509_c1 nmdc:mga05p37_78509_c1_2020_3324 414
148 3300050508 nmdc:mga09592_139021_c1 nmdc:mga09592_139021_c1_567_1814 414
149 3300053093 Ga0500651_0051967 Ga0500651_0051967_724_1971 414
150 3300053094 Ga0500566_0019757 Ga0500566_0019757_653_1900 414
151 3300053119 Ga0500595_000002 Ga0500595_000002_800944_802191 414
152 3300053153 Ga0500616_0000002 Ga0500616_0000002_849838_851085 414
153 3300053730 Ga0500645_000068 Ga0500645_000068_63804_65108 414
154 3300005434 Ga0070709_10036932 Ga0070709_100369323 415
155 3300005435 Ga0070714_100239505 Ga0070714_1002395052 415
156 3300005436 Ga0070713_100064005 Ga0070713_1000640053 415
157 3300005440 Ga0070705_100068110 Ga0070705_1000681103 415
158 3300005471 Ga0070698_100172188 Ga0070698_1001721882 415
159 3300005546 Ga0070696_100041851 Ga0070696_1000418512 415
160 3300005549 Ga0070704_100009604 Ga0070704_1000096044 415
161 3300025928 Ga0207700_10025064 Ga0207700_100250645 415
162 3300025929 Ga0207664_10250873 Ga0207664_102508732 415
163 3300025935 Ga0207709_10049562 Ga0207709_100495622 415
164 3300035111 Ga0373923_0002223 Ga0373923_0002223_3626_4879 415
165 3300035119 Ga0373956_0058806 Ga0373956_0058806_364_1617 415
166 3300035170 Ga0373943_0010582 Ga0373943_0010582_429_1682 415
167 3300035172 Ga0373955_0005269 Ga0373955_0005269_697_1950 415
168 3300035724 Ga0373933_0000746 Ga0373933_0000746_16496_17749 415
169 3300036401 Ga0373937_0000413 Ga0373937_0000413_16913_18166 415
170 3300037068 Ga0373925_0106146 Ga0373925_0106146_486_1739 415
171 3300046454 Ga0495592_0000629 Ga0495592_0000629_9419_10672 415
172 3300046459 Ga0495629_0008241 Ga0495629_0008241_6259_7512 415
173 3300046462 Ga0495651_0000319 Ga0495651_0000319_13426_14679 415
174 3300046463 Ga0495653_0000391 Ga0495653_0000391_18024_19277 415
175 3300046477 Ga0495664_0007411 Ga0495664_0007411_144_1397 415
176 3300046511 Ga0495608_0000916 Ga0495608_0000916_19396_20649 415
177 3300046514 Ga0495618_0005397 Ga0495618_0005397_6375_7628 415
178 3300046516 Ga0495628_0006786 Ga0495628_0006786_6497_7750 415
179 3300046529 Ga0495652_0001170 Ga0495652_0001170_19280_20533 415
180 3300046536 Ga0495587_0001521 Ga0495587_0001521_8266_9519 415
181 3300046559 Ga0495667_0016785 Ga0495667_0016785_156_1409 415
182 3300046642 Ga0495634_0016225 Ga0495634_0016225_950_2203 415
183 3300046663 Ga0495635_0013159 Ga0495635_0013159_3922_5175 415
184 3300046678 Ga0495599_0056084 Ga0495599_0056084_502_1755 415
185 3300046679 Ga0495623_0003474 Ga0495623_0003474_2913_4166 415
186 3300046809 Ga0495600_0004265 Ga0495600_0004265_349_1602 415
187 3300047315 Ga0495581_0051827 Ga0495581_0051827_834_2087 415
188 3300047317 Ga0495604_0000580 Ga0495604_0000580_12328_13581 415
189 3300047319 Ga0495674_0002826 Ga0495674_0002826_3025_4278 415
190 3300047322 Ga0495680_0000636 Ga0495680_0000636_26932_28185 415
191 3300047444 Ga0495675_0034184 Ga0495675_0034184_362_1615 415
192 3300047471 Ga0495684_0002834 Ga0495684_0002834_596_1849 415
193 3300047673 Ga0495593_0011221 Ga0495593_0011221_3691_4944 415
194 3300048088 Ga0495602_0004623 Ga0495602_0004623_7824_9077 415
195 3300049592 Ga0501076_0037533 Ga0501076_0037533_1407_2657 415
196 3300049743 Ga0501081_0022681 Ga0501081_0022681_372_1622 415
197 3300053077 Ga0495601_0005912 Ga0495601_0005912_1812_3065 415
198 3300053078 Ga0495612_0003895 Ga0495612_0003895_2004_3257 415
199 3300053084 Ga0495595_0000112 Ga0495595_0000112_27596_28849 415
200 3300053085 Ga0495619_0001541 Ga0495619_0001541_13079_14332 415
201 2162886007 SwRhRL2b_contig_763623 SwRhRL2b_0583.00004070 419
202 3300005289 Ga0065704_10070420 Ga0065704_1007042022 419
203 3300005295 Ga0065707_10081918 Ga0065707_1008191822 419
204 3300031239 Ga0265328_10020093 Ga0265328_100200932 419
205 3300031241 Ga0265325_10029900 Ga0265325_100299002 419
206 3300031241 Ga0265325_10032383 Ga0265325_100323832 419
207 3300031247 Ga0265340_10039284 Ga0265340_100392842 419
208 3300031344 Ga0265316_10042273 Ga0265316_100422732 419
209 3300031595 Ga0265313_10017243 Ga0265313_100172434 419

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF07969

Amidohydro_3

Amidohydrolase family

42

396

0.93

PF01979

Amidohydro_1

Amidohydrolase family

52

395

0.51

Structural Annotation

Top 5 Hits

ID Description Score Start End
4cqd-assembly1.cif.gz_A the reaction mechanism of the n-isopropylammelide isopropylaminohydrolase atzc: insights from structural and mutagenesis studies 0.9254 3 400
4cqc-assembly1.cif.gz_B the reaction mechanism of the n-isopropylammelide isopropylaminohydrolase atzc: insights from structural and mutagenesis studies 0.9243 5 400
5akq-assembly1.cif.gz_B x-ray structure and mutagenesis studies of the n-isopropylammelide isopropylaminohydrolase, atzc 0.9239 5 401
6nbo-assembly1.cif.gz_A crystal structure of n-isopropylammelide isopropylaminohydrolase from burkholderia multivorans atcc 17616 0.9173 7 399
1r9x-assembly1.cif.gz_A-5 bacterial cytosine deaminase d314g mutant. 0.9127 8 399
ID Description Score Start End Superfamily
4cqcB02 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Metal-dependent hydrolases 0.9059 56 358 3.20.20.140
4cqcB02 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Metal-dependent hydrolases 0.8945 56 358 3.20.20.140
4cqdB01 Mainly Beta;Roll;Urease, subunit C; domain 1;Urease, subunit C, domain 1 0.8905 2 53 2.30.40.10
4jnpB02 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Metal-dependent hydrolases 0.8793 56 360 3.20.20.140
2icsA01 Mainly Beta;Roll;Urease, subunit C; domain 1;Urease, subunit C, domain 1 0.8695 5 52 2.30.40.10
ID Description Score Start End GO Terms
AF-A0A496QN87-F1-model_v4 Cytosine deaminase 0.9828 127 400 GO:0004131
GO:0006209
GO:0035888
AF-A0A7C2W8B4-F1-model_v4 Cytosine deaminase 0.9792 7 400 GO:0004131
GO:0006209
GO:0035888
AF-A0A090RBK0-F1-model_v4 deleted 0.9787 146 260
AF-A0A7J3RYM9-F1-model_v4 Cytosine deaminase 0.9782 4 400 GO:0004131
GO:0006209
GO:0035888
AF-A0A7C4I4Q4-F1-model_v4 Cytosine deaminase 0.9776 3 400 GO:0004131
GO:0006209
GO:0035888

Feature Viewer

pLDDT pTM Quality
90.43 0.91 High
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Predicted Structure (AlphaFold2)

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