F318492

General Info

Members Datasets Scaffolds Average Seq Length
208 125 416 292

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2842694124|2842697472
Length 327
Sequence DAPARERAPRGRDADGRSDNWIERLRAFVGLGAPQTLREEFAEALEETDETDLSVSPQERVLLRNVLGLRGTRVDDVMVPRTEIVAVSEDLTLGQLLATFAEAGHSRLPVHQGSLDEPRGMVHVKDVLAVLARGAQAGGTGLDLAGVDVNVRIGDADLIRPVIYVPPSMAATDLLARMQSLHIHLALVVDEYGGVDGLLSIEDIVETIVGDIEDEHDDEAEVRIAPDGEGGFVADARTPLEDVAEAVGPTFDIADFVDEVDTIGGLIVTLAGRVPAQGDVVAGPGGHRIEVLEANPRRVVSVRIARGTDPARVDDESDTPGNAADAA

Samples

Sample ID Description Type Environment
1 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
2 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
3 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
4 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
5 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
6 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
7 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
8 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
9 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
10 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
11 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
12 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
13 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
14 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
15 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
16 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
17 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
18 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
19 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
20 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
21 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
22 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
23 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
24 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
25 3300021358 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 Metagenome Rhizosphere
26 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
27 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
28 3300021441 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 Metagenome Rhizosphere
29 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
30 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
31 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
43 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
46 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
47 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
48 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
49 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
50 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
51 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
52 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
53 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
54 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
55 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
56 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
57 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
58 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
59 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
60 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
61 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
62 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
63 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
64 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
65 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
66 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
67 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
68 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
69 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
70 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
71 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
72 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
73 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
74 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
75 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
76 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
77 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
78 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
79 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
80 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
81 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
82 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
83 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
84 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
85 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
86 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
87 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
88 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
89 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
90 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
91 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
92 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
93 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
94 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
95 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
96 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
97 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
98 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
99 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
100 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
101 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
102 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
103 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
104 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
105 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
106 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
107 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
108 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
109 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
110 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
111 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
112 3300053091 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 endosphere Metagenome Endosphere
113 3300053111 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 endosphere Metagenome Endosphere
114 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
115 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
116 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
117 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
118 3300053737 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 endosphere Metagenome Endosphere
119 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
120 2842694124 Methylopila sp. R-72369 Isolate Unclassified
121 2522572158 Azospirillum halopraeferens DSM 3675 Isolate Unclassified
122 2597490356 Azospirillum brasilense sp7 Isolate Unclassified
123 2846952575 Azospirillum brasilense sp7 Isolate Unclassified
124 2848858292 Azospirillum brasilense Az39 Isolate Unclassified
125 2909399089 Nguyenibacter vanlangensis LMG 31431 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 97.12
Metatranscriptomes 0
Isolates 2.88

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.81
Nodule 0
Rhizoplane 0.48
Rhizosphere 85.1
Stem 0
Stem Tuber 0
Unclassified 0.96

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0068868_100126687 3300005338 Bacteria 2087
2 Ga0070709_10020461 3300005434 Bacteria 3838
3 Ga0070709_10028741 3300005434 Bacteria 3319
4 Ga0070709_10153505 3300005434 Bacteria 1594
5 Ga0070714_100007615 3300005435 Bacteria 8431
6 Ga0070714_100012201 3300005435 Bacteria 6852
7 Ga0070714_100019683 3300005435 Bacteria 5503
8 Ga0070710_10002330 3300005437 Bacteria 8990
9 Ga0070710_10075938 3300005437 Bacteria 1948
10 Ga0070711_100011301 3300005439 Bacteria 5540
11 Ga0070711_100129291 3300005439 Bacteria 1879
12 Ga0070711_100447531 3300005439 Unclassified 1057
13 Ga0070698_100006435 3300005471 Bacteria 12736
14 Ga0070698_100255503 3300005471 Bacteria 1685
15 Ga0070699_100277315 3300005518 Bacteria 1501
16 Ga0070679_100238622 3300005530 Bacteria 1776
17 Ga0070679_100270005 3300005530 Bacteria 1655
18 Ga0070697_100060251 3300005536 Bacteria 3093
19 Ga0070665_100062331 3300005548 Bacteria 3739
20 Ga0070665_100122024 3300005548 Bacteria 2607
21 Ga0068855_100619180 3300005563 Bacteria 1166
22 Ga0068856_100039511 3300005614 Bacteria 4632
23 Ga0068856_100485924 3300005614 Bacteria 1256
24 Ga0081540_1002209 3300005983 Bacteria 16073
25 Ga0070717_10007459 3300006028 Bacteria 8124
26 Ga0070717_10007628 3300006028 Bacteria 8041
27 Ga0070717_10257329 3300006028 Bacteria 1544
28 Ga0070717_10280436 3300006028 Bacteria 1478
29 Ga0070717_10464510 3300006028 Bacteria 1142
30 Ga0070712_100014026 3300006175 Bacteria 5136
31 Ga0070712_100028966 3300006175 Bacteria 3709
32 Ga0070712_100104057 3300006175 Bacteria 2106
33 Ga0105240_10028446 3300009093 Bacteria 7301
34 Ga0105240_10065276 3300009093 Bacteria 4519
35 Ga0105247_10276045 3300009101 Bacteria 1158
36 Ga0105241_10526787 3300009174 Bacteria 1057
37 Ga0105248_10079982 3300009177 Bacteria 3673
38 Ga0105238_10005952 3300009551 Bacteria 12091
39 Ga0105238_10167073 3300009551 Bacteria 2176
40 Ga0099796_10003127 3300010159 Bacteria 3778
41 Ga0099796_10015443 3300010159 Bacteria 2232
42 Ga0105239_10090137 3300010375 Bacteria 3383
43 Ga0105239_10315818 3300010375 Bacteria 1761
44 Ga0105239_10382370 3300010375 Bacteria 1591
45 Ga0105239_10608587 3300010375 Bacteria 1247
46 Ga0157369_10365045 3300013105 Bacteria 1499
47 Ga0163163_10151113 3300014325 Bacteria 2366
48 Ga0213873_10013995 3300021358 Bacteria 1771
49 Ga0213872_10000056 3300021361 Bacteria 101365
50 Ga0213872_10000750 3300021361 Bacteria 23990
51 Ga0213872_10001090 3300021361 Bacteria 18645
52 Ga0213872_10001629 3300021361 Bacteria 14212
53 Ga0213872_10008146 3300021361 Bacteria 5085
54 Ga0213872_10012931 3300021361 Bacteria 3915
55 Ga0213874_10019356 3300021377 Bacteria 1852
56 Ga0213871_10001808 3300021441 Bacteria 3738
57 Ga0209676_1000197 3300025292 Bacteria 135043
58 Ga0209050_1027132 3300025298 Bacteria 1897
59 Ga0207699_10101667 3300025906 Bacteria 1825
60 Ga0207699_10252259 3300025906 Bacteria 1216
61 Ga0207707_10120358 3300025912 Bacteria 2295
62 Ga0207695_10082730 3300025913 Bacteria 3244
63 Ga0207695_10377050 3300025913 Bacteria 1304
64 Ga0207671_10063820 3300025914 Bacteria 2737
65 Ga0207693_10001699 3300025915 Bacteria 19392
66 Ga0207693_10015858 3300025915 Bacteria 6035
67 Ga0207693_10036028 3300025915 Bacteria 3899
68 Ga0207693_10056017 3300025915 Bacteria 3091
69 Ga0207663_10064080 3300025916 Bacteria 2344
70 Ga0207652_10179802 3300025921 Bacteria 1900
71 Ga0207694_10004576 3300025924 Bacteria 10778
72 Ga0207694_10318299 3300025924 Bacteria 1283
73 Ga0207700_10005925 3300025928 Bacteria 7354
74 Ga0207700_10097447 3300025928 Bacteria 2337
75 Ga0207664_10022377 3300025929 Bacteria 4719
76 Ga0207664_10207407 3300025929 Bacteria 1694
77 Ga0207664_10311474 3300025929 Bacteria 1387
78 Ga0207644_10262004 3300025931 Bacteria 1383
79 Ga0207702_10286338 3300026078 Bacteria 1559
80 Ga0207683_10050685 3300026121 Bacteria 3637
81 Ga0268266_10000863 3300028379 Bacteria 39421
82 Ga0268266_10210169 3300028379 Bacteria 1784
83 Ga0265318_10034516 3300028577 Bacteria 1950
84 Ga0265338_10064010 3300028800 Bacteria 3202
85 Ga0265338_10084680 3300028800 Bacteria 2646
86 Ga0265331_10000229 3300031250 Bacteria 67423
87 Ga0265316_10065365 3300031344 Bacteria 2817
88 Ga0265313_10004334 3300031595 Bacteria 10976
89 Ga0265314_10032871 3300031711 Bacteria 3811
90 Ga0265314_10108352 3300031711 Bacteria 1770
91 Ga0373926_0032305 3300035083 Bacteria 1847
92 Ga0373923_0009656 3300035111 Bacteria 3489
93 Ga0373945_0056939 3300035116 Bacteria 1451
94 Ga0373953_0171050 3300035117 Bacteria 935
95 Ga0373946_0020603 3300035171 Bacteria 2550
96 Ga0373924_0216442 3300035410 Bacteria 846
97 Ga0373935_0369578 3300035692 Bacteria 1025
98 Ga0373927_0139483 3300035695 Bacteria 1585
99 Ga0373933_0002115 3300035724 Bacteria 11405
100 Ga0373933_0009739 3300035724 Bacteria 5258
101 Ga0373933_0091470 3300035724 Bacteria 1878
102 Ga0373937_0005817 3300036401 Bacteria 10602
103 Ga0373937_0010046 3300036401 Bacteria 8252
104 Ga0373937_0078173 3300036401 Bacteria 3057
105 Ga0373937_0378023 3300036401 Bacteria 1343
106 Ga0395899_0072874 3300037312 Bacteria 2513
107 Ga0395899_0089055 3300037312 Bacteria 2239
108 Ga0436364_0109973 3300037853 Bacteria 3640
109 Ga0436364_0150743 3300037853 Bacteria 1432
110 Ga0436364_0408711 3300037853 Bacteria 5475
111 Ga0436364_0633266 3300037853 Bacteria 4092
112 Ga0436364_1236795 3300037853 Bacteria 2162
113 Ga0395901_0045063 3300038443 Bacteria 4576
114 Ga0436365_0438262 3300039437 Bacteria 8145
115 Ga0436360_0182547 3300039438 Bacteria 5133
116 Ga0436360_0548532 3300039438 Bacteria 1967
117 Ga0436360_0808820 3300039438 Bacteria 1917
118 Ga0436360_1065994 3300039438 Bacteria 1492
119 Ga0436360_1070291 3300039438 Bacteria 1027
120 Ga0436361_0012467 3300039447 Bacteria 129952
121 Ga0436361_0019743 3300039447 Unclassified 1290
122 Ga0436361_0157428 3300039447 Bacteria 8153
123 Ga0436361_0190500 3300039447 Bacteria 4479
124 Ga0436361_0211220 3300039447 Bacteria 46566
125 Ga0436361_0357314 3300039447 Bacteria 4050
126 Ga0436361_0483453 3300039447 Bacteria 6802
127 Ga0436361_0522637 3300039447 Bacteria 2543
128 Ga0436361_0611683 3300039447 Bacteria 2754
129 Ga0436361_0640520 3300039447 Bacteria 2099
130 Ga0436361_0788423 3300039447 Bacteria 1326
131 Ga0436361_0831801 3300039447 Bacteria 1733
132 Ga0436361_0882838 3300039447 Bacteria 25023
133 Ga0436361_1158353 3300039447 Bacteria 1190
134 Ga0436361_1200636 3300039447 Bacteria 8020
135 Ga0436363_0118561 3300039450 Bacteria 1746
136 Ga0436363_0823924 3300039450 Bacteria 1087
137 Ga0436363_0976531 3300039450 Bacteria 1606
138 Ga0436363_0977757 3300039450 Bacteria 5073
139 Ga0436363_1482120 3300039450 Bacteria 2670
140 Ga0436362_0517620 3300039453 Bacteria 1806
141 Ga0436362_0702968 3300039453 Bacteria 2756
142 Ga0436362_0940966 3300039453 Bacteria 1081
143 Ga0436362_1118680 3300039453 Bacteria 1126
144 Ga0436362_1143582 3300039453 Bacteria 1731
145 Ga0451577_0012555 3300042876 Bacteria 7954
146 Ga0466966_0109038 3300044684 Bacteria 1708
147 Ga0466963_0159698 3300044694 Bacteria 1569
148 Ga0453684_0089337 3300044712 Bacteria 3811
149 Ga0466957_0166197 3300044842 Bacteria 1435
150 Ga0451576_0000056 3300045051 Bacteria 303398
151 Ga0451576_0101793 3300045051 Bacteria 2987
152 Ga0466958_0000931 3300045836 Bacteria 13192
153 Ga0466967_0075618 3300045976 Bacteria 3027
154 Ga0466967_0381931 3300045976 Bacteria 1368
155 Ga0495592_0080539 3300046454 Bacteria 2356
156 Ga0495592_0182985 3300046454 Bacteria 1426
157 Ga0495651_0047080 3300046462 Bacteria 3336
158 Ga0495664_0011847 3300046477 Bacteria 4925
159 Ga0495608_0017972 3300046511 Bacteria 4886
160 Ga0495628_0028059 3300046516 Bacteria 4578
161 Ga0495652_0177641 3300046529 Bacteria 1637
162 Ga0495652_0396165 3300046529 Bacteria 979
163 Ga0495665_0176171 3300046531 Bacteria 1112
164 Ga0495640_0191734 3300046533 Bacteria 1299
165 Ga0495645_0011578 3300046543 Bacteria 6211
166 Ga0495635_0145252 3300046663 Bacteria 1615
167 Ga0495599_0077810 3300046678 Bacteria 2071
168 Ga0495623_0032466 3300046679 Bacteria 3356
169 Ga0495613_0158921 3300046689 Bacteria 1609
170 Ga0495604_0136422 3300047317 Bacteria 1757
171 Ga0495604_0364684 3300047317 Bacteria 957
172 Ga0495674_0127688 3300047319 Bacteria 2144
173 Ga0495680_0099113 3300047322 Bacteria 2173
174 Ga0495675_0037952 3300047444 Bacteria 3067
175 Ga0495684_0113315 3300047471 Bacteria 2045
176 Ga0495684_0340062 3300047471 Bacteria 1068
177 Ga0495602_0000841 3300048088 Bacteria 29570
178 Ga0496104_0476872 3300048907 Bacteria 1159
179 Ga0496119_0014505 3300048922 Bacteria 6159
180 Ga0496120_0035884 3300048923 Bacteria 2957
181 Ga0501034_0053349 3300049571 Bacteria 4071
182 Ga0501037_0076746 3300049573 Bacteria 2425
183 Ga0501043_0137127 3300049579 Bacteria 1917
184 Ga0501046_0192289 3300049580 Bacteria 1522
185 Ga0501047_0115498 3300049581 Bacteria 2566
186 Ga0501080_0500962 3300049742 Bacteria 1085
187 Ga0501044_0178855 3300049823 Bacteria 2089
188 nmdc:mga0n895_269133_c1 3300050512 Bacteria 1728
189 Ga0495601_0021778 3300053077 Bacteria 3928
190 Ga0495601_0285790 3300053077 Bacteria 1075
191 Ga0495612_0001688 3300053078 Bacteria 9082
192 Ga0495595_0089423 3300053084 Bacteria 1476
193 Ga0495619_0010956 3300053085 Bacteria 5705
194 Ga0500643_029498 3300053087 Bacteria 1687
195 Ga0500647_0014372 3300053091 Bacteria 3598
196 Ga0500572_011555 3300053111 Bacteria 2140
197 Ga0500595_004395 3300053119 Bacteria 6336
198 Ga0500652_000100 3300053131 Bacteria 34600
199 Ga0500636_0009939 3300053177 Bacteria 5537
200 Ga0500637_0005126 3300053178 Bacteria 6312
201 Ga0500601_005325 3300053737 Bacteria 1407
202 Ga0501084_0391233 3300054114 Bacteria 1175
203 2842697472 2842694124 Bacteria 4063419
204 2523103439 2522572158 Bacteria 6514390
205 2599102847 2597490356 Bacteria 7030811
206 2846952721 2846952575 Bacteria 6587527
207 2848861210 2848858292 Bacteria 7391279
208 2909402939 2909399089 Bacteria 3922598
209 Ga0068868_100126687
210 Ga0070709_10020461
211 Ga0070709_10028741
212 Ga0070709_10153505
213 Ga0070714_100007615
214 Ga0070714_100012201
215 Ga0070714_100019683
216 Ga0070710_10002330
217 Ga0070710_10075938
218 Ga0070711_100011301
219 Ga0070711_100129291
220 Ga0070711_100447531
221 Ga0070698_100006435
222 Ga0070698_100255503
223 Ga0070699_100277315
224 Ga0070679_100238622
225 Ga0070679_100270005
226 Ga0070697_100060251
227 Ga0070665_100062331
228 Ga0070665_100122024
229 Ga0068855_100619180
230 Ga0068856_100039511
231 Ga0068856_100485924
232 Ga0081540_1002209
233 Ga0070717_10007459
234 Ga0070717_10007628
235 Ga0070717_10257329
236 Ga0070717_10280436
237 Ga0070717_10464510
238 Ga0070712_100014026
239 Ga0070712_100028966
240 Ga0070712_100104057
241 Ga0105240_10028446
242 Ga0105240_10065276
243 Ga0105247_10276045
244 Ga0105241_10526787
245 Ga0105248_10079982
246 Ga0105238_10005952
247 Ga0105238_10167073
248 Ga0099796_10003127
249 Ga0099796_10015443
250 Ga0105239_10090137
251 Ga0105239_10315818
252 Ga0105239_10382370
253 Ga0105239_10608587
254 Ga0157369_10365045
255 Ga0163163_10151113
256 Ga0213873_10013995
257 Ga0213872_10000056
258 Ga0213872_10000750
259 Ga0213872_10001090
260 Ga0213872_10001629
261 Ga0213872_10008146
262 Ga0213872_10012931
263 Ga0213874_10019356
264 Ga0213871_10001808
265 Ga0209676_1000197
266 Ga0209050_1027132
267 Ga0207699_10101667
268 Ga0207699_10252259
269 Ga0207707_10120358
270 Ga0207695_10082730
271 Ga0207695_10377050
272 Ga0207671_10063820
273 Ga0207693_10001699
274 Ga0207693_10015858
275 Ga0207693_10036028
276 Ga0207693_10056017
277 Ga0207663_10064080
278 Ga0207652_10179802
279 Ga0207694_10004576
280 Ga0207694_10318299
281 Ga0207700_10005925
282 Ga0207700_10097447
283 Ga0207664_10022377
284 Ga0207664_10207407
285 Ga0207664_10311474
286 Ga0207644_10262004
287 Ga0207702_10286338
288 Ga0207683_10050685
289 Ga0268266_10000863
290 Ga0268266_10210169
291 Ga0265318_10034516
292 Ga0265338_10064010
293 Ga0265338_10084680
294 Ga0265331_10000229
295 Ga0265316_10065365
296 Ga0265313_10004334
297 Ga0265314_10032871
298 Ga0265314_10108352
299 Ga0373926_0032305
300 Ga0373923_0009656
301 Ga0373945_0056939
302 Ga0373953_0171050
303 Ga0373946_0020603
304 Ga0373924_0216442
305 Ga0373935_0369578
306 Ga0373927_0139483
307 Ga0373933_0002115
308 Ga0373933_0009739
309 Ga0373933_0091470
310 Ga0373937_0005817
311 Ga0373937_0010046
312 Ga0373937_0078173
313 Ga0373937_0378023
314 Ga0395899_0072874
315 Ga0395899_0089055
316 Ga0436364_0109973
317 Ga0436364_0150743
318 Ga0436364_0408711
319 Ga0436364_0633266
320 Ga0436364_1236795
321 Ga0395901_0045063
322 Ga0436365_0438262
323 Ga0436360_0182547
324 Ga0436360_0548532
325 Ga0436360_0808820
326 Ga0436360_1065994
327 Ga0436360_1070291
328 Ga0436361_0012467
329 Ga0436361_0019743
330 Ga0436361_0157428
331 Ga0436361_0190500
332 Ga0436361_0211220
333 Ga0436361_0357314
334 Ga0436361_0483453
335 Ga0436361_0522637
336 Ga0436361_0611683
337 Ga0436361_0640520
338 Ga0436361_0788423
339 Ga0436361_0831801
340 Ga0436361_0882838
341 Ga0436361_1158353
342 Ga0436361_1200636
343 Ga0436363_0118561
344 Ga0436363_0823924
345 Ga0436363_0976531
346 Ga0436363_0977757
347 Ga0436363_1482120
348 Ga0436362_0517620
349 Ga0436362_0702968
350 Ga0436362_0940966
351 Ga0436362_1118680
352 Ga0436362_1143582
353 Ga0451577_0012555
354 Ga0466966_0109038
355 Ga0466963_0159698
356 Ga0453684_0089337
357 Ga0466957_0166197
358 Ga0451576_0000056
359 Ga0451576_0101793
360 Ga0466958_0000931
361 Ga0466967_0075618
362 Ga0466967_0381931
363 Ga0495592_0080539
364 Ga0495592_0182985
365 Ga0495651_0047080
366 Ga0495664_0011847
367 Ga0495608_0017972
368 Ga0495628_0028059
369 Ga0495652_0177641
370 Ga0495652_0396165
371 Ga0495665_0176171
372 Ga0495640_0191734
373 Ga0495645_0011578
374 Ga0495635_0145252
375 Ga0495599_0077810
376 Ga0495623_0032466
377 Ga0495613_0158921
378 Ga0495604_0136422
379 Ga0495604_0364684
380 Ga0495674_0127688
381 Ga0495680_0099113
382 Ga0495675_0037952
383 Ga0495684_0113315
384 Ga0495684_0340062
385 Ga0495602_0000841
386 Ga0496104_0476872
387 Ga0496119_0014505
388 Ga0496120_0035884
389 Ga0501034_0053349
390 Ga0501037_0076746
391 Ga0501043_0137127
392 Ga0501046_0192289
393 Ga0501047_0115498
394 Ga0501080_0500962
395 Ga0501044_0178855
396 nmdc:mga0n895_269133_c1
397 Ga0495601_0021778
398 Ga0495601_0285790
399 Ga0495612_0001688
400 Ga0495595_0089423
401 Ga0495619_0010956
402 Ga0500643_029498
403 Ga0500647_0014372
404 Ga0500572_011555
405 Ga0500595_004395
406 Ga0500652_000100
407 Ga0500636_0009939
408 Ga0500637_0005126
409 Ga0500601_005325
410 Ga0501084_0391233
411 2842697472
412 2523103439
413 2599102847
414 2846952721
415 2848861210
416 2909402939

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03471

CorC_HlyC

Transporter associated domain

226

307

0.9

PF00571

CBS

CBS domain

153

210

0.88

PF00571

CBS

CBS domain

74

133

0.87

Structural Annotation

Top 5 Hits

ID Description Score Start End
3nqr-assembly1.cif.gz_D-2 a putative cbs domain-containing protein from salmonella typhimurium lt2 0.9545 65 186
7msu-assembly1.cif.gz_A-2 crystal structure of an archaeal cnnm, mtcorb, cbs-pair domain in complex with mg2+-atp 0.9396 65 186
3nqr-assembly1.cif.gz_D-2 a putative cbs domain-containing protein from salmonella typhimurium lt2 0.9395 65 186
3lfr-assembly1.cif.gz_A the crystal structure of a cbs domain from a putative metal ion transporter bound to amp from pseudomonas syringae to 1.55a 0.9394 66 183
5yz2-assembly1.cif.gz_A the cystathionine-beta-synthase (cbs) domain of magnesium and cobalt efflux protein corc in complex with both c2'- and c3'-endo amp 0.9369 62 189
ID Description Score Start End Superfamily
3oi8B02 Alpha Beta;Alpha-Beta Complex;CBS domain Like; 0.9448 79 140 3.90.1280.20
3nqrA01 Alpha Beta;Alpha-Beta Complex;CBS domain Like; 0.9252 142 183 3.90.1280.20
3lv9A00 Alpha Beta;Roll;CBS-domain;CBS-domain 0.9071 61 189 3.10.580.10
af_P9WFP1_180_329_3.10.580.10 Alpha Beta;Roll;CBS-domain;CBS-domain 0.9037 48 192 3.10.580.10
3oi8B02 Alpha Beta;Alpha-Beta Complex;CBS domain Like; 0.9028 79 140 3.90.1280.20
ID Description Score Start End GO Terms
AF-A0A528TM14-F1-model_v4 CBS domain-containing protein 0.9255 58 181 GO:0005886
AF-A0A7Z9UI63-F1-model_v4 CBS domain-containing protein 0.8627 52 196 GO:0005886
AF-A0A7J4MVS4-F1-model_v4 CBS domain-containing protein 0.8616 62 187
AF-A0A7Y2AHC8-F1-model_v4 CBS domain-containing protein 0.8595 37 185
AF-T2GHF1-F1-model_v4 Putative transcriptional regulator 0.8572 66 187 GO:0003677
GO:0006355

Map