F315712
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 206 | 175 | 412 | 352 |
Family's Representative Sequence
| Representative Sequence | 3300049742|Ga0501080_0065937|Ga0501080_0065937_1251_2321 |
| Length | 356 |
| Sequence | MPEGIARQHSAMDDSPTVRLTSLAHGGGCGCKLAPAVLQSLLADQPAAQPYRQLLVGTETGDDAAVWQVDDETCIVATTDFFMPIVDDPRDFGRIAATNAISDIYAMGGRPIMALAILGIPVNKISTDTVRDILKGGAEACAVAGGHSIDCPEPIYGLAVIGVCRPAEVRRNADAAPGDRLILTKPVGVGVYSAALKKACLGPAAYAEMLASTTQLNRVGAQLAKDPAVHAITDVTGFGLLGHTLEMARGAGLALVVEGANVPFLAEAASLAQQGFVTGASTRNWDSYGRDVALPADMPAWQRHLLTDPQTSGGLLVACDPARTDAILEAIVAAGHPAARIIGHAEPGAATVHVRW |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300049742 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 | Metagenome | Rhizosphere |
| 2 | 3300003187 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB | Metagenome | Endosphere |
| 3 | 3300005331 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG | Metagenome | Rhizosphere |
| 4 | 3300005335 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG | Metagenome | Rhizosphere |
| 5 | 3300005336 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG | Metagenome | Rhizosphere |
| 6 | 3300005344 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG | Metagenome | Rhizosphere |
| 7 | 3300005366 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG | Metagenome | Rhizosphere |
| 8 | 3300005436 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG | Metagenome | Rhizosphere |
| 9 | 3300005437 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG | Metagenome | Rhizosphere |
| 10 | 3300005536 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG | Metagenome | Rhizosphere |
| 11 | 3300005539 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 | Metagenome | Rhizosphere |
| 12 | 3300005543 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG | Metagenome | Rhizosphere |
| 13 | 3300005545 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG | Metagenome | Rhizosphere |
| 14 | 3300005564 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG | Metagenome | Rhizosphere |
| 15 | 3300005614 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 | Metagenome | Rhizosphere |
| 16 | 3300005616 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 | Metagenome | Rhizosphere |
| 17 | 3300005937 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 | Metagenome | Rhizosphere |
| 18 | 3300005983 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 | Metagenome | Rhizosphere |
| 19 | 3300006028 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG | Metagenome | Rhizosphere |
| 20 | 3300006051 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 | Metagenome | Endosphere |
| 21 | 3300006353 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 | Metagenome | Endosphere |
| 22 | 3300006914 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 | Metagenome | Rhizosphere |
| 23 | 3300006946 | Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG | Metagenome | Nodule |
| 24 | 3300007076 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 | Metagenome | Rhizosphere |
| 25 | 3300009098 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG | Metagenome | Rhizosphere |
| 26 | 3300010375 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG | Metagenome | Rhizosphere |
| 27 | 3300013100 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG | Metagenome | Rhizosphere |
| 28 | 3300013104 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG | Metagenome | Rhizosphere |
| 29 | 3300013307 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG | Metagenome | Rhizosphere |
| 30 | 3300014325 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG | Metagenome | Rhizosphere |
| 31 | 3300021388 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 | Metagenome | Unclassified |
| 32 | 3300025273 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) | Metagenome | Endosphere |
| 33 | 3300025284 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) | Metagenome | Endosphere |
| 34 | 3300025294 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) | Metagenome | Endosphere |
| 35 | 3300025295 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) | Metagenome | Endosphere |
| 36 | 3300025297 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) | Metagenome | Endosphere |
| 37 | 3300025299 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) | Metagenome | Endosphere |
| 38 | 3300025302 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) | Metagenome | Endosphere |
| 39 | 3300025898 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 40 | 3300025909 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 41 | 3300025913 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 42 | 3300025919 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 43 | 3300025925 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 44 | 3300025928 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 45 | 3300025929 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 46 | 3300025931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 47 | 3300025944 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 48 | 3300025949 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 49 | 3300025960 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 50 | 3300025981 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 51 | 3300026041 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 52 | 3300026078 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 53 | 3300026142 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 54 | 3300027111 | Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) | Metagenome | Nodule |
| 55 | 3300028573 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG | Metagenome | Rhizosphere |
| 56 | 3300028800 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG | Metagenome | Rhizosphere |
| 57 | 3300030763 | Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI5 (Metagenome Metatranscriptome) | Metatranscriptome | Rhizosphere |
| 58 | 3300031238 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG | Metagenome | Rhizosphere |
| 59 | 3300031247 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG | Metagenome | Rhizosphere |
| 60 | 3300031249 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG | Metagenome | Rhizosphere |
| 61 | 3300031250 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG | Metagenome | Rhizosphere |
| 62 | 3300031595 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG | Metagenome | Rhizosphere |
| 63 | 3300031711 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG | Metagenome | Rhizosphere |
| 64 | 3300031712 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG | Metagenome | Rhizosphere |
| 65 | 3300031727 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 | Metagenome | Rhizosphere |
| 66 | 3300032133 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA | Metagenome | Rhizosphere |
| 67 | 3300035207 | Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 | Metagenome | Rhizosphere |
| 68 | 3300035398 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 | Metagenome | Rhizosphere |
| 69 | 3300035691 | Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 | Metagenome | Rhizosphere |
| 70 | 3300036401 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 | Metagenome | Rhizosphere |
| 71 | 3300036712 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA | Metagenome | Rhizosphere |
| 72 | 3300037853 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 | Metagenome | Unclassified |
| 73 | 3300038443 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 | Metagenome | Rhizosphere |
| 74 | 3300039438 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 | Metagenome | Rhizosphere |
| 75 | 3300039447 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 | Metagenome | Rhizosphere |
| 76 | 3300046460 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere | Metagenome | Rhizosphere |
| 77 | 3300046507 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere | Metagenome | Rhizosphere |
| 78 | 3300046524 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere | Metagenome | Rhizosphere |
| 79 | 3300046530 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere | Metagenome | Rhizosphere |
| 80 | 3300048907 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 | Metagenome | Rhizoplane |
| 81 | 3300048908 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 | Metagenome | Rhizoplane |
| 82 | 3300048911 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled | Metagenome | Rhizoplane |
| 83 | 3300048912 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled | Metagenome | Rhizoplane |
| 84 | 3300048913 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 | Metagenome | Rhizoplane |
| 85 | 3300048914 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 | Metagenome | Rhizoplane |
| 86 | 3300048915 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 | Metagenome | Rhizoplane |
| 87 | 3300048916 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 | Metagenome | Rhizoplane |
| 88 | 3300048918 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 | Metagenome | Rhizoplane |
| 89 | 3300048919 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled | Metagenome | Unclassified |
| 90 | 3300048920 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 | Metagenome | Unclassified |
| 91 | 3300048921 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 | Metagenome | Unclassified |
| 92 | 3300048922 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 | Metagenome | Unclassified |
| 93 | 3300048923 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 | Metagenome | Unclassified |
| 94 | 3300048924 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 | Metagenome | Unclassified |
| 95 | 3300048925 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled | Metagenome | Unclassified |
| 96 | 3300048926 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled | Metagenome | Unclassified |
| 97 | 3300048927 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 | Metagenome | Unclassified |
| 98 | 3300048928 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 | Metagenome | Unclassified |
| 99 | 3300049569 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 100 | 3300049571 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 101 | 3300049572 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 102 | 3300049573 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 103 | 3300049574 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 104 | 3300049576 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 105 | 3300049579 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 106 | 3300049580 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 107 | 3300049582 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 108 | 3300049583 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 | Metagenome | Rhizosphere |
| 109 | 3300049586 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 | Metagenome | Rhizosphere |
| 110 | 3300049589 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 | Metagenome | Rhizosphere |
| 111 | 3300049591 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 | Metagenome | Rhizosphere |
| 112 | 3300049592 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 | Metagenome | Rhizosphere |
| 113 | 3300049593 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 | Metagenome | Rhizosphere |
| 114 | 3300049741 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 | Metagenome | Rhizosphere |
| 115 | 3300049743 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 | Metagenome | Rhizosphere |
| 116 | 3300049744 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 | Metagenome | Rhizosphere |
| 117 | 3300049822 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 118 | 3300049823 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 119 | 3300049824 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 120 | 3300050496 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation | Metagenome | Endosphere |
| 121 | 3300050508 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation | Metagenome | Rhizosphere |
| 122 | 3300050510 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation | Metagenome | Rhizosphere |
| 123 | 3300050514 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation | Metagenome | Rhizosphere |
| 124 | 3300050516 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation | Metagenome | Endosphere |
| 125 | 3300053111 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 endosphere | Metagenome | Endosphere |
| 126 | 3300053119 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere | Metagenome | Endosphere |
| 127 | 3300053131 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere | Metagenome | Endosphere |
| 128 | 3300053136 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere | Metagenome | Endosphere |
| 129 | 3300053153 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere | Metagenome | Endosphere |
| 130 | 3300053177 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere | Metagenome | Endosphere |
| 131 | 3300053725 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 endosphere | Metagenome | Endosphere |
| 132 | 3300053735 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 endosphere | Metagenome | Endosphere |
| 133 | 3300060353 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 | Metagenome | Rhizosphere |
| 134 | 3300061734 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) | Metagenome | Rhizosphere |
| 135 | 2512047086 | Sinorhizobium arboris LMG 14919 | Isolate | Nodule |
| 136 | 2599185236 | Rhizobium sp. NFR07 | Isolate | Rhizoplane |
| 137 | 2599185301 | Mesorhizobium sp. NFR06 | Isolate | Rhizoplane |
| 138 | 2602042107 | Bradyrhizobium sp. NFR13 | Isolate | Rhizoplane |
| 139 | 2818991461 | Neorhizobium alkalisoli 1225 | Isolate | Unclassified |
| 140 | 2818991467 | Bosea vestrisii 3192 | Isolate | Unclassified |
| 141 | 2821123053 | Rhizobium cellulosilyticum 1193 | Isolate | Unclassified |
| 142 | 2838736955 | Rhizobium cellulosilyticum SEMIA 448 | Isolate | Nodule |
| 143 | 2841840854 | Rhizobium cellulosilyticum SEMIA 444 | Isolate | Nodule |
| 144 | 2842140634 | Rhizobium cellulosilyticum SEMIA 452 | Isolate | Nodule |
| 145 | 2844533157 | Inquilinus sp. R-72501 v. 2 | Isolate | Unclassified |
| 146 | 2854911287 | Brucella lupini LUP21 | Isolate | Unclassified |
| 147 | 2857531043 | Neorhizobium sp. R-72160 | Isolate | Unclassified |
| 148 | 2871495908 | Mesorhizobium sp. M1C.F.Ca.ET.193.01.1.1 | Isolate | Nodule |
| 149 | 2874123672 | Mesorhizobium sp. M00.F.Ca.ET.216.01.1.1 | Isolate | Nodule |
| 150 | 2876369609 | Mesorhizobium sp. USDA-HM6 | Isolate | Unclassified |
| 151 | 2878760144 | Mesorhizobium sp. M1C.F.Ca.ET.192.01.1.1 | Isolate | Nodule |
| 152 | 2878767105 | Mesorhizobium sp. M1C.F.Ca.ET.144.01.1.1 | Isolate | Nodule |
| 153 | 2881147464 | Mesorhizobium sp. M1B.F.Ca.ET.045.04.1.1 | Isolate | Nodule |
| 154 | 2883354860 | Hypericibacter adhaerens R5959 | Isolate | Rhizosphere |
| 155 | 2885305155 | Mesorhizobium sp. M1E.F.Ca.ET.045.02.1.1 | Isolate | Nodule |
| 156 | 2885312484 | Mesorhizobium sp. M9A.F.Ca.ET.002.03.1.2 | Isolate | Nodule |
| 157 | 2885326080 | Mesorhizobium sp. M1E.F.Ca.ET.041.01.1.1 | Isolate | Nodule |
| 158 | 2885334103 | Mesorhizobium sp. M1E.F.Ca.ET.063.01.1.1 | Isolate | Nodule |
| 159 | 2894817345 | Aureimonas psammosilenae YIM DR1026 | Isolate | Unclassified |
| 160 | 2899259804 | Paracoccus aeridis JC501 | Isolate | Rhizosphere |
| 161 | 2902405164 | Methylobacterium sp. P1-11 | Isolate | Unclassified |
| 162 | 2903540706 | Mesorhizobium sp. M1C.F.Ca.ET.212.01.1.1 | Isolate | Nodule |
| 163 | 2917699015 | Bosea sp. F3-2 | Isolate | Rhizosphere |
| 164 | 2937836603 | Mesorhizobium sp. M6A.T.Cr.TU.014.01.1.1 | Isolate | Nodule |
| 165 | 2937994558 | Mesorhizobium sp. M1C.F.Ca.ET.187.01.1.1 | Isolate | Nodule |
| 166 | 2958165035 | Mesorhizobium sp. M1C.F.Ca.ET.196.01.1.1 | Isolate | Nodule |
| 167 | 2961163497 | Mesorhizobium sp. M1C.F.Ca.ET.176.01.1.1 | Isolate | Nodule |
| 168 | 2965018300 | Mesorhizobium sp. M1C.F.Ca.ET.188.01.1.1 | Isolate | Nodule |
| 169 | 2968171901 | Mesorhizobium sp. M1C.F.Ca.ET.189.01.1.1 | Isolate | Nodule |
| 170 | 2970554993 | Mesorhizobium sp. M1C.F.Ca.ET.210.01.1.1 | Isolate | Nodule |
| 171 | 2977864932 | Mesorhizobium tamadayense DSM 28320 | Isolate | Nodule |
| 172 | 2987659509 | Mesorhizobium sp. M1C.F.Ca.ET.204.01.1.1 | Isolate | Nodule |
| 173 | 3004188549 | Mesorhizobium sp. M1C.F.Ca.ET.195.01.1.1 | Isolate | Nodule |
| 174 | 8055617313 | Mesorhizobium onobrychidis OM4 | Isolate | Nodule |
| 175 | 8057575449 | Rhizobium mayense CCGE526 | Isolate | Nodule |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 79.61 |
| Metatranscriptomes | 0.49 |
| Isolates | 19.9 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 11.17 |
| Nodule | 13.59 |
| Rhizoplane | 8.74 |
| Rhizosphere | 53.88 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 0 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | Ga0501080_0065937 | 3300049742 | Bacteria | 3367 |
| 2 | JGI25151J46595_10001093 | 3300003187 | Bacteria | 20067 |
| 3 | Ga0070670_100004829 | 3300005331 | Bacteria | 11327 |
| 4 | Ga0070666_10073960 | 3300005335 | Bacteria | 2322 |
| 5 | Ga0070680_100354592 | 3300005336 | Bacteria | 1247 |
| 6 | Ga0070661_100165767 | 3300005344 | Bacteria | 1676 |
| 7 | Ga0070659_100141143 | 3300005366 | Bacteria | 1961 |
| 8 | Ga0070713_100156193 | 3300005436 | Bacteria | 2033 |
| 9 | Ga0070713_100164935 | 3300005436 | Bacteria | 1980 |
| 10 | Ga0070710_10128701 | 3300005437 | Bacteria | 1541 |
| 11 | Ga0070697_100103986 | 3300005536 | Bacteria | 2361 |
| 12 | Ga0068853_100036561 | 3300005539 | Bacteria | 4177 |
| 13 | Ga0070672_100061131 | 3300005543 | Bacteria | 2969 |
| 14 | Ga0070695_100012605 | 3300005545 | Bacteria | 5077 |
| 15 | Ga0070664_100014404 | 3300005564 | Bacteria | 6447 |
| 16 | Ga0068856_100299224 | 3300005614 | Bacteria | 1626 |
| 17 | Ga0068852_100006867 | 3300005616 | Bacteria | 8270 |
| 18 | Ga0081455_10000413 | 3300005937 | Bacteria | 56249 |
| 19 | Ga0081540_1003526 | 3300005983 | Bacteria | 12332 |
| 20 | Ga0081540_1009958 | 3300005983 | Bacteria | 6482 |
| 21 | Ga0070717_10194510 | 3300006028 | Bacteria | 1774 |
| 22 | Ga0075364_10081014 | 3300006051 | Bacteria | 2146 |
| 23 | Ga0075370_10050950 | 3300006353 | Bacteria | 2349 |
| 24 | Ga0075436_100019805 | 3300006914 | Bacteria | 4614 |
| 25 | Ga0079104_1000044 | 3300006946 | Bacteria | 185367 |
| 26 | Ga0075435_100014854 | 3300007076 | Bacteria | 5839 |
| 27 | Ga0105245_10199873 | 3300009098 | Bacteria | 1919 |
| 28 | Ga0105239_10067060 | 3300010375 | Bacteria | 3942 |
| 29 | Ga0157373_10061191 | 3300013100 | Bacteria | 2667 |
| 30 | Ga0157370_10059106 | 3300013104 | Bacteria | 3644 |
| 31 | Ga0157372_10183985 | 3300013307 | Bacteria | 2419 |
| 32 | Ga0163163_10184916 | 3300014325 | Bacteria | 2131 |
| 33 | Ga0213875_10014044 | 3300021388 | Bacteria | 3916 |
| 34 | Ga0209673_1001486 | 3300025273 | Bacteria | 21871 |
| 35 | Ga0209130_1000779 | 3300025284 | Bacteria | 27540 |
| 36 | Ga0209025_1000670 | 3300025294 | Bacteria | 59184 |
| 37 | Ga0209025_1040280 | 3300025294 | Bacteria | 2023 |
| 38 | Ga0209564_1000416 | 3300025295 | Bacteria | 74830 |
| 39 | Ga0209564_1008645 | 3300025295 | Bacteria | 4984 |
| 40 | Ga0209758_1003843 | 3300025297 | Bacteria | 13182 |
| 41 | Ga0209256_1000550 | 3300025299 | Bacteria | 53839 |
| 42 | Ga0207426_1000750 | 3300025302 | Bacteria | 36521 |
| 43 | Ga0207692_10116097 | 3300025898 | Bacteria | 1492 |
| 44 | Ga0207705_10116006 | 3300025909 | Bacteria | 1982 |
| 45 | Ga0207695_10199759 | 3300025913 | Bacteria | 1914 |
| 46 | Ga0207657_10025562 | 3300025919 | Bacteria | 5442 |
| 47 | Ga0207650_10003034 | 3300025925 | Bacteria | 11564 |
| 48 | Ga0207700_10032558 | 3300025928 | Bacteria | 3719 |
| 49 | Ga0207700_10095839 | 3300025928 | Bacteria | 2354 |
| 50 | Ga0207664_10042524 | 3300025929 | Bacteria | 3547 |
| 51 | Ga0207644_10001353 | 3300025931 | Bacteria | 15759 |
| 52 | Ga0207661_10175980 | 3300025944 | Bacteria | 1865 |
| 53 | Ga0207667_10151990 | 3300025949 | Bacteria | 2382 |
| 54 | Ga0207651_10008803 | 3300025960 | Bacteria | 5479 |
| 55 | Ga0207640_10064718 | 3300025981 | Bacteria | 2436 |
| 56 | Ga0207639_10139451 | 3300026041 | Bacteria | 2018 |
| 57 | Ga0207702_10035165 | 3300026078 | Bacteria | 4189 |
| 58 | Ga0207702_10055635 | 3300026078 | Bacteria | 3356 |
| 59 | Ga0207698_10007307 | 3300026142 | Bacteria | 6923 |
| 60 | Ga0209281_1000129 | 3300027111 | Bacteria | 194490 |
| 61 | Ga0265334_10088742 | 3300028573 | Bacteria | 1130 |
| 62 | Ga0265338_10023021 | 3300028800 | Bacteria | 6421 |
| 63 | Ga0265763_1000035 | 3300030763 | Bacteria | 5400 |
| 64 | Ga0265332_10001463 | 3300031238 | Bacteria | 13211 |
| 65 | Ga0265340_10001613 | 3300031247 | Bacteria | 12952 |
| 66 | Ga0265339_10000802 | 3300031249 | Bacteria | 24237 |
| 67 | Ga0265339_10018456 | 3300031249 | Bacteria | 4110 |
| 68 | Ga0265331_10027513 | 3300031250 | Bacteria | 2849 |
| 69 | Ga0265313_10000752 | 3300031595 | Bacteria | 33139 |
| 70 | Ga0265314_10000829 | 3300031711 | Bacteria | 36749 |
| 71 | Ga0265314_10125792 | 3300031711 | Bacteria | 1606 |
| 72 | Ga0265342_10000039 | 3300031712 | Bacteria | 140091 |
| 73 | Ga0265342_10058499 | 3300031712 | Bacteria | 2278 |
| 74 | Ga0316576_10043442 | 3300031727 | Bacteria | 3243 |
| 75 | Ga0316583_10041975 | 3300032133 | Bacteria | 1618 |
| 76 | Ga0373942_0024076 | 3300035207 | Bacteria | 1559 |
| 77 | Ga0316574_0000597 | 3300035398 | Bacteria | 15004 |
| 78 | Ga0373931_0112699 | 3300035691 | Bacteria | 1545 |
| 79 | Ga0373937_0041250 | 3300036401 | Bacteria | 4210 |
| 80 | Ga0316584_0015983 | 3300036712 | Bacteria | 5376 |
| 81 | Ga0436364_1508438 | 3300037853 | Bacteria | 17040 |
| 82 | Ga0395901_0079399 | 3300038443 | Bacteria | 3426 |
| 83 | Ga0395901_0105968 | 3300038443 | Bacteria | 2951 |
| 84 | Ga0436360_1184393 | 3300039438 | Bacteria | 3706 |
| 85 | Ga0436361_0512259 | 3300039447 | Bacteria | 4350 |
| 86 | Ga0436361_0773984 | 3300039447 | Bacteria | 2205 |
| 87 | Ga0436361_0811566 | 3300039447 | Bacteria | 9707 |
| 88 | Ga0495638_0033059 | 3300046460 | Bacteria | 3309 |
| 89 | Ga0495606_0026151 | 3300046507 | Bacteria | 4163 |
| 90 | Ga0495648_0000552 | 3300046524 | Bacteria | 40192 |
| 91 | Ga0495648_0006474 | 3300046524 | Bacteria | 9555 |
| 92 | Ga0495654_0000133 | 3300046530 | Bacteria | 78489 |
| 93 | Ga0496104_0000189 | 3300048907 | Bacteria | 55677 |
| 94 | Ga0496104_0125861 | 3300048907 | Bacteria | 2461 |
| 95 | Ga0496105_0003335 | 3300048908 | Bacteria | 11869 |
| 96 | Ga0496105_0068210 | 3300048908 | Bacteria | 2938 |
| 97 | Ga0496105_0142228 | 3300048908 | Bacteria | 1975 |
| 98 | Ga0496108_0283671 | 3300048911 | Bacteria | 1442 |
| 99 | Ga0496109_0111812 | 3300048912 | Bacteria | 2540 |
| 100 | Ga0496109_0350992 | 3300048912 | Bacteria | 1393 |
| 101 | Ga0496110_0000425 | 3300048913 | Bacteria | 28663 |
| 102 | Ga0496110_0007154 | 3300048913 | Bacteria | 8885 |
| 103 | Ga0496111_0000217 | 3300048914 | Bacteria | 27335 |
| 104 | Ga0496112_0022539 | 3300048915 | Bacteria | 6002 |
| 105 | Ga0496112_0260529 | 3300048915 | Bacteria | 1683 |
| 106 | Ga0496113_0011042 | 3300048916 | Bacteria | 6005 |
| 107 | Ga0496115_0179966 | 3300048918 | Bacteria | 1748 |
| 108 | Ga0496116_0016135 | 3300048919 | Bacteria | 5862 |
| 109 | Ga0496116_0058296 | 3300048919 | Bacteria | 2519 |
| 110 | Ga0496117_0025535 | 3300048920 | Bacteria | 4643 |
| 111 | Ga0496118_0133283 | 3300048921 | Bacteria | 1590 |
| 112 | Ga0496119_0002209 | 3300048922 | Bacteria | 21740 |
| 113 | Ga0496120_0052346 | 3300048923 | Bacteria | 2326 |
| 114 | Ga0496121_0009307 | 3300048924 | Bacteria | 11331 |
| 115 | Ga0496122_0030165 | 3300048925 | Bacteria | 4553 |
| 116 | Ga0496122_0068904 | 3300048925 | Bacteria | 2537 |
| 117 | Ga0496122_0069339 | 3300048925 | Bacteria | 2525 |
| 118 | Ga0496123_0033445 | 3300048926 | Bacteria | 3700 |
| 119 | Ga0496124_0025327 | 3300048927 | Bacteria | 5375 |
| 120 | Ga0496124_0029112 | 3300048927 | Bacteria | 4927 |
| 121 | Ga0496125_0002186 | 3300048928 | Bacteria | 26107 |
| 122 | Ga0496125_0004081 | 3300048928 | Bacteria | 17082 |
| 123 | Ga0501032_0015568 | 3300049569 | Bacteria | 5364 |
| 124 | Ga0501034_0050470 | 3300049571 | Bacteria | 4196 |
| 125 | Ga0501036_0001826 | 3300049572 | Bacteria | 16524 |
| 126 | Ga0501037_0006039 | 3300049573 | Bacteria | 8839 |
| 127 | Ga0501038_0009254 | 3300049574 | Bacteria | 9037 |
| 128 | Ga0501040_0087854 | 3300049576 | Bacteria | 2159 |
| 129 | Ga0501043_0008732 | 3300049579 | Bacteria | 7975 |
| 130 | Ga0501046_0001561 | 3300049580 | Bacteria | 21887 |
| 131 | Ga0501048_0012037 | 3300049582 | Bacteria | 6447 |
| 132 | Ga0501067_0002767 | 3300049583 | Bacteria | 9655 |
| 133 | Ga0501070_0077497 | 3300049586 | Bacteria | 2751 |
| 134 | Ga0501073_0046043 | 3300049589 | Bacteria | 3070 |
| 135 | Ga0501075_0030790 | 3300049591 | Bacteria | 3977 |
| 136 | Ga0501076_0048697 | 3300049592 | Bacteria | 3349 |
| 137 | Ga0501077_0067917 | 3300049593 | Bacteria | 2260 |
| 138 | Ga0501079_0043121 | 3300049741 | Bacteria | 3482 |
| 139 | Ga0501080_0002968 | 3300049742 | Bacteria | 14927 |
| 140 | Ga0501081_0016894 | 3300049743 | Bacteria | 4822 |
| 141 | Ga0501081_0029620 | 3300049743 | Bacteria | 3700 |
| 142 | Ga0501083_0094309 | 3300049744 | Bacteria | 1976 |
| 143 | Ga0501035_0033884 | 3300049822 | Bacteria | 4642 |
| 144 | Ga0501044_0013005 | 3300049823 | Bacteria | 9008 |
| 145 | Ga0501045_0011329 | 3300049824 | Bacteria | 6260 |
| 146 | Ga0501045_0027994 | 3300049824 | Bacteria | 4065 |
| 147 | nmdc:mga07m45_37174_c1 | 3300050496 | Bacteria | 2331 |
| 148 | nmdc:mga09592_16229_c2 | 3300050508 | Bacteria | 4521 |
| 149 | nmdc:mga06r32_4853_c1 | 3300050510 | Bacteria | 12112 |
| 150 | nmdc:mga08x19_19522_c1 | 3300050514 | Bacteria | 4160 |
| 151 | nmdc:mga08x19_22_c1 | 3300050514 | Bacteria | 297462 |
| 152 | nmdc:mga0sz30_2412_c1 | 3300050516 | Bacteria | 6667 |
| 153 | Ga0500572_002945 | 3300053111 | Bacteria | 3991 |
| 154 | Ga0500572_042744 | 3300053111 | Bacteria | 1322 |
| 155 | Ga0500595_006472 | 3300053119 | Bacteria | 4962 |
| 156 | Ga0500652_000005 | 3300053131 | Bacteria | 171538 |
| 157 | Ga0500559_0003254 | 3300053136 | Bacteria | 8064 |
| 158 | Ga0500616_0000006 | 3300053153 | Bacteria | 944738 |
| 159 | Ga0500636_0017972 | 3300053177 | Bacteria | 4180 |
| 160 | Ga0500576_040781 | 3300053725 | Bacteria | 2089 |
| 161 | Ga0500596_002658 | 3300053735 | Bacteria | 3505 |
| 162 | Ga0501082_0022774 | 3300060353 | Bacteria | 5396 |
| 163 | Ga0501082_0058883 | 3300060353 | Bacteria | 3310 |
| 164 | Ga0501082_0062951 | 3300060353 | Bacteria | 3194 |
| 165 | Ga0530510_0032601 | 3300061734 | Bacteria | 3749 |
| 166 | 2512530469 | 2512047086 | Bacteria | 6850303 |
| 167 | 2599720714 | 2599185236 | Bacteria | 6875203 |
| 168 | 2599941082 | 2599185301 | Bacteria | 6161860 |
| 169 | 2603862069 | 2602042107 | Bacteria | 6226103 |
| 170 | 2819686724 | 2818991461 | Bacteria | 7026071 |
| 171 | 2819717743 | 2818991467 | Bacteria | 5893227 |
| 172 | 2821127271 | 2821123053 | Bacteria | 7836056 |
| 173 | 2838740585 | 2838736955 | Bacteria | 5760694 |
| 174 | 2841844426 | 2841840854 | Bacteria | 5761912 |
| 175 | 2842144506 | 2842140634 | Bacteria | 5759631 |
| 176 | 2844535088 | 2844533157 | Bacteria | 7517899 |
| 177 | 2854914767 | 2854911287 | Bacteria | 5582813 |
| 178 | 2857534748 | 2857531043 | Bacteria | 6754041 |
| 179 | 2871501629 | 2871495908 | Bacteria | 6935695 |
| 180 | 2874123971 | 2874123672 | Bacteria | 7238285 |
| 181 | 2876371312 | 2876369609 | Bacteria | 6807521 |
| 182 | 2878765566 | 2878760144 | Bacteria | 6823465 |
| 183 | 2878772756 | 2878767105 | Bacteria | 6898628 |
| 184 | 2881151067 | 2881147464 | Bacteria | 7779814 |
| 185 | 2883356344 | 2883354860 | Bacteria | 5865246 |
| 186 | 2885306067 | 2885305155 | Bacteria | 7348390 |
| 187 | 2885318624 | 2885312484 | Bacteria | 6415165 |
| 188 | 2885332231 | 2885326080 | Bacteria | 7134805 |
| 189 | 2885338029 | 2885334103 | Bacteria | 7216818 |
| 190 | 2894817661 | 2894817345 | Bacteria | 4892941 |
| 191 | 2899260987 | 2899259804 | Bacteria | 3320927 |
| 192 | 2902405794 | 2902405164 | Bacteria | 6784948 |
| 193 | 2903546445 | 2903540706 | Bacteria | 7062119 |
| 194 | 2917700949 | 2917699015 | Bacteria | 7043791 |
| 195 | 2937842563 | 2937836603 | Bacteria | 6811263 |
| 196 | 2938000307 | 2937994558 | Bacteria | 7036190 |
| 197 | 2958170738 | 2958165035 | Bacteria | 6906348 |
| 198 | 2961169188 | 2961163497 | Bacteria | 6901077 |
| 199 | 2965019129 | 2965018300 | Bacteria | 6883036 |
| 200 | 2968177571 | 2968171901 | Bacteria | 6894245 |
| 201 | 2970560417 | 2970554993 | Bacteria | 6814252 |
| 202 | 2977871507 | 2977864932 | Bacteria | 7534097 |
| 203 | 2987665254 | 2987659509 | Bacteria | 6966464 |
| 204 | 3004194307 | 3004188549 | Bacteria | 6952365 |
| 205 | 8055619532 | 8055617313 | Bacteria | 7548464 |
| 206 | 8057581282 | 8057575449 | Bacteria | 7367519 |
| 207 | Ga0501080_0065937 | |||
| 208 | JGI25151J46595_10001093 | |||
| 209 | Ga0070670_100004829 | |||
| 210 | Ga0070666_10073960 | |||
| 211 | Ga0070680_100354592 | |||
| 212 | Ga0070661_100165767 | |||
| 213 | Ga0070659_100141143 | |||
| 214 | Ga0070713_100156193 | |||
| 215 | Ga0070713_100164935 | |||
| 216 | Ga0070710_10128701 | |||
| 217 | Ga0070697_100103986 | |||
| 218 | Ga0068853_100036561 | |||
| 219 | Ga0070672_100061131 | |||
| 220 | Ga0070695_100012605 | |||
| 221 | Ga0070664_100014404 | |||
| 222 | Ga0068856_100299224 | |||
| 223 | Ga0068852_100006867 | |||
| 224 | Ga0081455_10000413 | |||
| 225 | Ga0081540_1003526 | |||
| 226 | Ga0081540_1009958 | |||
| 227 | Ga0070717_10194510 | |||
| 228 | Ga0075364_10081014 | |||
| 229 | Ga0075370_10050950 | |||
| 230 | Ga0075436_100019805 | |||
| 231 | Ga0079104_1000044 | |||
| 232 | Ga0075435_100014854 | |||
| 233 | Ga0105245_10199873 | |||
| 234 | Ga0105239_10067060 | |||
| 235 | Ga0157373_10061191 | |||
| 236 | Ga0157370_10059106 | |||
| 237 | Ga0157372_10183985 | |||
| 238 | Ga0163163_10184916 | |||
| 239 | Ga0213875_10014044 | |||
| 240 | Ga0209673_1001486 | |||
| 241 | Ga0209130_1000779 | |||
| 242 | Ga0209025_1000670 | |||
| 243 | Ga0209025_1040280 | |||
| 244 | Ga0209564_1000416 | |||
| 245 | Ga0209564_1008645 | |||
| 246 | Ga0209758_1003843 | |||
| 247 | Ga0209256_1000550 | |||
| 248 | Ga0207426_1000750 | |||
| 249 | Ga0207692_10116097 | |||
| 250 | Ga0207705_10116006 | |||
| 251 | Ga0207695_10199759 | |||
| 252 | Ga0207657_10025562 | |||
| 253 | Ga0207650_10003034 | |||
| 254 | Ga0207700_10032558 | |||
| 255 | Ga0207700_10095839 | |||
| 256 | Ga0207664_10042524 | |||
| 257 | Ga0207644_10001353 | |||
| 258 | Ga0207661_10175980 | |||
| 259 | Ga0207667_10151990 | |||
| 260 | Ga0207651_10008803 | |||
| 261 | Ga0207640_10064718 | |||
| 262 | Ga0207639_10139451 | |||
| 263 | Ga0207702_10035165 | |||
| 264 | Ga0207702_10055635 | |||
| 265 | Ga0207698_10007307 | |||
| 266 | Ga0209281_1000129 | |||
| 267 | Ga0265334_10088742 | |||
| 268 | Ga0265338_10023021 | |||
| 269 | Ga0265763_1000035 | |||
| 270 | Ga0265332_10001463 | |||
| 271 | Ga0265340_10001613 | |||
| 272 | Ga0265339_10000802 | |||
| 273 | Ga0265339_10018456 | |||
| 274 | Ga0265331_10027513 | |||
| 275 | Ga0265313_10000752 | |||
| 276 | Ga0265314_10000829 | |||
| 277 | Ga0265314_10125792 | |||
| 278 | Ga0265342_10000039 | |||
| 279 | Ga0265342_10058499 | |||
| 280 | Ga0316576_10043442 | |||
| 281 | Ga0316583_10041975 | |||
| 282 | Ga0373942_0024076 | |||
| 283 | Ga0316574_0000597 | |||
| 284 | Ga0373931_0112699 | |||
| 285 | Ga0373937_0041250 | |||
| 286 | Ga0316584_0015983 | |||
| 287 | Ga0436364_1508438 | |||
| 288 | Ga0395901_0079399 | |||
| 289 | Ga0395901_0105968 | |||
| 290 | Ga0436360_1184393 | |||
| 291 | Ga0436361_0512259 | |||
| 292 | Ga0436361_0773984 | |||
| 293 | Ga0436361_0811566 | |||
| 294 | Ga0495638_0033059 | |||
| 295 | Ga0495606_0026151 | |||
| 296 | Ga0495648_0000552 | |||
| 297 | Ga0495648_0006474 | |||
| 298 | Ga0495654_0000133 | |||
| 299 | Ga0496104_0000189 | |||
| 300 | Ga0496104_0125861 | |||
| 301 | Ga0496105_0003335 | |||
| 302 | Ga0496105_0068210 | |||
| 303 | Ga0496105_0142228 | |||
| 304 | Ga0496108_0283671 | |||
| 305 | Ga0496109_0111812 | |||
| 306 | Ga0496109_0350992 | |||
| 307 | Ga0496110_0000425 | |||
| 308 | Ga0496110_0007154 | |||
| 309 | Ga0496111_0000217 | |||
| 310 | Ga0496112_0022539 | |||
| 311 | Ga0496112_0260529 | |||
| 312 | Ga0496113_0011042 | |||
| 313 | Ga0496115_0179966 | |||
| 314 | Ga0496116_0016135 | |||
| 315 | Ga0496116_0058296 | |||
| 316 | Ga0496117_0025535 | |||
| 317 | Ga0496118_0133283 | |||
| 318 | Ga0496119_0002209 | |||
| 319 | Ga0496120_0052346 | |||
| 320 | Ga0496121_0009307 | |||
| 321 | Ga0496122_0030165 | |||
| 322 | Ga0496122_0068904 | |||
| 323 | Ga0496122_0069339 | |||
| 324 | Ga0496123_0033445 | |||
| 325 | Ga0496124_0025327 | |||
| 326 | Ga0496124_0029112 | |||
| 327 | Ga0496125_0002186 | |||
| 328 | Ga0496125_0004081 | |||
| 329 | Ga0501032_0015568 | |||
| 330 | Ga0501034_0050470 | |||
| 331 | Ga0501036_0001826 | |||
| 332 | Ga0501037_0006039 | |||
| 333 | Ga0501038_0009254 | |||
| 334 | Ga0501040_0087854 | |||
| 335 | Ga0501043_0008732 | |||
| 336 | Ga0501046_0001561 | |||
| 337 | Ga0501048_0012037 | |||
| 338 | Ga0501067_0002767 | |||
| 339 | Ga0501070_0077497 | |||
| 340 | Ga0501073_0046043 | |||
| 341 | Ga0501075_0030790 | |||
| 342 | Ga0501076_0048697 | |||
| 343 | Ga0501077_0067917 | |||
| 344 | Ga0501079_0043121 | |||
| 345 | Ga0501080_0002968 | |||
| 346 | Ga0501081_0016894 | |||
| 347 | Ga0501081_0029620 | |||
| 348 | Ga0501083_0094309 | |||
| 349 | Ga0501035_0033884 | |||
| 350 | Ga0501044_0013005 | |||
| 351 | Ga0501045_0011329 | |||
| 352 | Ga0501045_0027994 | |||
| 353 | nmdc:mga07m45_37174_c1 | |||
| 354 | nmdc:mga09592_16229_c2 | |||
| 355 | nmdc:mga06r32_4853_c1 | |||
| 356 | nmdc:mga08x19_19522_c1 | |||
| 357 | nmdc:mga08x19_22_c1 | |||
| 358 | nmdc:mga0sz30_2412_c1 | |||
| 359 | Ga0500572_002945 | |||
| 360 | Ga0500572_042744 | |||
| 361 | Ga0500595_006472 | |||
| 362 | Ga0500652_000005 | |||
| 363 | Ga0500559_0003254 | |||
| 364 | Ga0500616_0000006 | |||
| 365 | Ga0500636_0017972 | |||
| 366 | Ga0500576_040781 | |||
| 367 | Ga0500596_002658 | |||
| 368 | Ga0501082_0022774 | |||
| 369 | Ga0501082_0058883 | |||
| 370 | Ga0501082_0062951 | |||
| 371 | Ga0530510_0032601 | |||
| 372 | 2512530469 | |||
| 373 | 2599720714 | |||
| 374 | 2599941082 | |||
| 375 | 2603862069 | |||
| 376 | 2819686724 | |||
| 377 | 2819717743 | |||
| 378 | 2821127271 | |||
| 379 | 2838740585 | |||
| 380 | 2841844426 | |||
| 381 | 2842144506 | |||
| 382 | 2844535088 | |||
| 383 | 2854914767 | |||
| 384 | 2857534748 | |||
| 385 | 2871501629 | |||
| 386 | 2874123971 | |||
| 387 | 2876371312 | |||
| 388 | 2878765566 | |||
| 389 | 2878772756 | |||
| 390 | 2881151067 | |||
| 391 | 2883356344 | |||
| 392 | 2885306067 | |||
| 393 | 2885318624 | |||
| 394 | 2885332231 | |||
| 395 | 2885338029 | |||
| 396 | 2894817661 | |||
| 397 | 2899260987 | |||
| 398 | 2902405794 | |||
| 399 | 2903546445 | |||
| 400 | 2917700949 | |||
| 401 | 2937842563 | |||
| 402 | 2938000307 | |||
| 403 | 2958170738 | |||
| 404 | 2961169188 | |||
| 405 | 2965019129 | |||
| 406 | 2968177571 | |||
| 407 | 2970560417 | |||
| 408 | 2977871507 | |||
| 409 | 2987665254 | |||
| 410 | 3004194307 | |||
| 411 | 8055619532 | |||
| 412 | 8057581282 |
Family Sequences
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 3u0o-assembly1.cif.gz_A | the crystal structure of selenophosphate synthetase from e. coli | 0.938 | 35 | 354 |
| 3u0o-assembly1.cif.gz_A | the crystal structure of selenophosphate synthetase from e. coli | 0.9296 | 35 | 354 |
| 2zod-assembly1.cif.gz_B | crystal structure of selenophosphate synthetase from aquifex aeolicus | 0.9245 | 12 | 353 |
| 2zau-assembly1.cif.gz_C-2 | crystal structure of an n-terminally truncated selenophosphate synthetase from aquifex aeolicus | 0.9238 | 57 | 353 |
| 2yye-assembly1.cif.gz_A | crystal structure of selenophosphate synthetase from aquifex aeolicus complexed with ampcpp | 0.9223 | 9 | 353 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| 3u0oA01 | Alpha Beta;2-Layer Sandwich;60s Ribosomal Protein L30; Chain: A;;PurM-like, N-terminal domain | 0.9082 | 35 | 168 | 3.30.1330.10 |
| 3u0oB02 | Alpha Beta;Alpha-Beta Complex;Phosphoribosyl-aminoimidazole Synthetase; Chain A, domain 2;PurM-like C-terminal domain | 0.906 | 169 | 353 | 3.90.650.10 |
| 3u0oB02 | Alpha Beta;Alpha-Beta Complex;Phosphoribosyl-aminoimidazole Synthetase; Chain A, domain 2;PurM-like C-terminal domain | 0.9013 | 169 | 353 | 3.90.650.10 |
| 2zauB01 | Alpha Beta;2-Layer Sandwich;60s Ribosomal Protein L30; Chain: A;;PurM-like, N-terminal domain | 0.8992 | 56 | 167 | 3.30.1330.10 |
| 2yyeA01 | Alpha Beta;2-Layer Sandwich;60s Ribosomal Protein L30; Chain: A;;PurM-like, N-terminal domain | 0.8986 | 9 | 162 | 3.30.1330.10 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A529IV71-F1-model_v4 | deleted | 0.993 | 43 | 353 |
|
| AF-A0A259PD58-F1-model_v4 | Selenide, water dikinase SelD | 0.9868 | 68 | 353 |
GO:0004756
GO:0005524 GO:0005737 GO:0016260 |
| AF-A0A529IV71-F1-model_v4 | deleted | 0.9867 | 43 | 353 |
|
| AF-A9C2H3-F1-model_v4 | Selenide, water dikinase (EC 2.7.9.3) (Selenium donor protein) (Selenophosphate synthase) | 0.9828 | 1 | 353 |
GO:0000287
GO:0004756 GO:0005524 GO:0005737 GO:0016260 |
| AF-A0A2E5J697-F1-model_v4 | Selenide, water dikinase (EC 2.7.9.3) (Selenium donor protein) (Selenophosphate synthase) | 0.9827 | 11 | 353 |
GO:0000287
GO:0004756 GO:0005524 GO:0005737 GO:0016260 |