F315354

General Info

Members Datasets Scaffolds Average Seq Length
206 141 204 269

Family's Representative Sequence

Representative Sequence 3300035171|Ga0373946_0042098|Ga0373946_0042098_423_1331
Length 302
Sequence MVDWSIFSTRINLGPDIISGYLASDESAATVQAGSQRIKIRPPAVAGLFYAGNPLRLQTTVSQLLAEVPTPRQASPKALIAPHAGYVYSGGVAATAFATLRGGAQSIKRVVLIGPAHYVALRGIAAPTVDAFETPLGCVPVDRDAVSTIADLPFVAQTDAPHAPEHALEVELPFLQALLPSFAVVPLLVGHAVPQAIADVLRRLWGGPETLIVVSSDLSHYHDYDTAVRLDAATADAIERGDCDSLGPERACGFLVVAGLLAEANRRGLRAQRLSLCNSGDTAGSRDRVVGYGAWLVEQARA

Samples

Sample ID Description Type Environment
1 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
2 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
3 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
4 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
5 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
6 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
7 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
8 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
9 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
10 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
11 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
12 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
13 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
14 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
15 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
16 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
17 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
18 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
19 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
20 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
21 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
22 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
23 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
24 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
25 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
26 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
27 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
28 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
29 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
30 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
31 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
32 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
33 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
34 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
35 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
36 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
37 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
38 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
52 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
54 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
55 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
56 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
57 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
58 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
59 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
60 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
61 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
62 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
63 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
64 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
65 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
66 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
67 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
68 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
69 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
70 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
71 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
72 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
73 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
74 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
75 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
76 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
77 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
78 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
79 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
80 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
81 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
82 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
83 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
84 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
85 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
86 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
87 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
88 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
89 3300042131 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0225D_E14_070716_130 Metagenome Rhizosphere
90 3300042145 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0430D_E14_080116_2581 Metagenome Rhizosphere
91 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
92 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
93 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
94 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
95 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
96 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
97 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
98 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
99 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
100 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
101 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
102 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
103 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
104 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
105 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
106 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
107 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
108 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
109 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
110 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
111 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
112 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
113 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
114 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
115 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
116 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
117 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
118 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
119 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
120 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
121 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
122 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
123 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
124 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
125 3300049679 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_B_3_drought Metagenome Rhizosphere
126 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
127 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
128 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
129 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
130 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
131 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
132 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
133 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
134 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
135 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
136 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
137 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
138 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
139 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
140 643348564 Methylobacterium nodulans ORS 2060 Isolate Nodule
141 8056054917 Glycomyces luteolus NEAU-A15 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.03
Metatranscriptomes 0
Isolates 0.97

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.49
Nodule 0.49
Rhizoplane 8.74
Rhizosphere 89.32
Stem 0
Stem Tuber 0
Unclassified 0.97

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0065712_10002303 3300005290 Bacteria 4609
2 Ga0068869_100260512 3300005334 Bacteria 1388
3 Ga0070661_100422683 3300005344 Unclassified 1057
4 Ga0070668_100093612 3300005347 Bacteria 2371
5 Ga0070669_100018254 3300005353 Bacteria 5012
6 Ga0070671_100171372 3300005355 Bacteria 1836
7 Ga0070673_100084436 3300005364 Bacteria 2582
8 Ga0070688_100182580 3300005365 Bacteria 1456
9 Ga0070713_100274287 3300005436 Bacteria 1545
10 Ga0070700_100030402 3300005441 Bacteria 3228
11 Ga0070708_100018126 3300005445 Bacteria 5890
12 Ga0070685_10238657 3300005466 Bacteria 1199
13 Ga0070698_100535099 3300005471 Bacteria 1110
14 Ga0070699_100005109 3300005518 Bacteria 11540
15 Ga0070679_100059313 3300005530 Bacteria 3814
16 Ga0068857_100529939 3300005577 Bacteria 1108
17 Ga0068864_100128442 3300005618 Bacteria 2274
18 Ga0068862_100003154 3300005844 Bacteria 14324
19 Ga0068862_100445365 3300005844 Bacteria 1220
20 Ga0081455_10003119 3300005937 Bacteria 19301
21 Ga0081538_10110524 3300005981 Bacteria 1351
22 Ga0081540_1005998 3300005983 Bacteria 8951
23 Ga0075428_100004973 3300006844 Bacteria 14758
24 Ga0075428_100006749 3300006844 Bacteria 12766
25 Ga0075428_100009608 3300006844 Bacteria 10740
26 Ga0075428_100055735 3300006844 Bacteria 4331
27 Ga0075428_100133213 3300006844 Bacteria 2702
28 Ga0075428_100215021 3300006844 Bacteria 2077
29 Ga0075428_100653293 3300006844 Bacteria 1121
30 Ga0075430_100036911 3300006846 Bacteria 4142
31 Ga0075430_100209803 3300006846 Bacteria 1616
32 Ga0075430_100285296 3300006846 Bacteria 1366
33 Ga0075430_100322162 3300006846 Bacteria 1277
34 Ga0075431_100000492 3300006847 Bacteria 32809
35 Ga0075431_100044595 3300006847 Bacteria 4573
36 Ga0075431_100337863 3300006847 Bacteria 1516
37 Ga0075431_100435028 3300006847 Bacteria 1309
38 Ga0075434_100613718 3300006871 Bacteria 1107
39 Ga0075429_100007213 3300006880 Bacteria 9646
40 Ga0075429_100051001 3300006880 Bacteria 3600
41 Ga0075429_100053963 3300006880 Bacteria 3497
42 Ga0075435_100170539 3300007076 Bacteria 1836
43 Ga0099794_10032981 3300007265 Bacteria 2433
44 Ga0111539_10012041 3300009094 Bacteria 10849
45 Ga0111539_10019924 3300009094 Bacteria 8262
46 Ga0111539_10454759 3300009094 Bacteria 1491
47 Ga0105247_10272197 3300009101 Bacteria 1165
48 Ga0114129_10001243 3300009147 Bacteria 33943
49 Ga0114129_10003503 3300009147 Bacteria 22072
50 Ga0114129_10318698 3300009147 Bacteria 2067
51 Ga0114129_10410087 3300009147 Bacteria 1784
52 Ga0114129_10455728 3300009147 Bacteria 1677
53 Ga0114129_10484211 3300009147 Bacteria 1618
54 Ga0114129_10755066 3300009147 Bacteria 1245
55 Ga0114129_10892491 3300009147 Bacteria 1127
56 Ga0114129_11140396 3300009147 Bacteria 974
57 Ga0105243_10392654 3300009148 Bacteria 1286
58 Ga0105248_10004265 3300009177 Bacteria 15822
59 Ga0105249_10204050 3300009553 Bacteria 1936
60 Ga0157378_10532565 3300013297 Bacteria 1178
61 Ga0163162_10119538 3300013306 Bacteria 2738
62 Ga0157379_10313932 3300014968 Bacteria 1430
63 Ga0207653_10010525 3300025885 Bacteria 2884
64 Ga0207643_10047704 3300025908 Bacteria 2425
65 Ga0207684_10090102 3300025910 Bacteria 2613
66 Ga0207660_10078613 3300025917 Bacteria 2418
67 Ga0207652_10502966 3300025921 Bacteria 1091
68 Ga0207681_10142170 3300025923 Bacteria 1788
69 Ga0207665_10148125 3300025939 Bacteria 1679
70 Ga0207711_10046873 3300025941 Bacteria 3693
71 Ga0207651_10037126 3300025960 Bacteria 3189
72 Ga0207712_10171437 3300025961 Bacteria 1697
73 Ga0207668_10277685 3300025972 Bacteria 1372
74 Ga0207674_10040028 3300026116 Bacteria 4857
75 Ga0207675_100007164 3300026118 Bacteria 10540
76 Ga0207428_10004043 3300027907 Bacteria 14061
77 Ga0268265_10002995 3300028380 Bacteria 12336
78 Ga0268265_10384765 3300028380 Bacteria 1292
79 Ga0265329_10008305 3300031242 Unclassified 3945
80 Ga0265331_10131411 3300031250 Bacteria 1142
81 Ga0265327_10046080 3300031251 Bacteria 2312
82 Ga0307513_10000002 3300031456 Bacteria 842612
83 Ga0307408_100003154 3300031548 Bacteria 11362
84 Ga0307408_100036492 3300031548 Bacteria 3456
85 Ga0316575_10026352 3300031665 Bacteria 2259
86 Ga0316575_10034502 3300031665 Bacteria 1987
87 Ga0316579_10213697 3300031691 Bacteria 933
88 Ga0265314_10000203 3300031711 Bacteria 87485
89 Ga0316576_10022521 3300031727 Bacteria 4377
90 Ga0316576_10072051 3300031727 Bacteria 2549
91 Ga0316578_10000515 3300031728 Bacteria 13141
92 Ga0307405_10072220 3300031731 Bacteria 2223
93 Ga0307405_10159966 3300031731 Bacteria 1594
94 Ga0316577_10014567 3300031733 Bacteria 4317
95 Ga0307406_10011221 3300031901 Bacteria 5079
96 Ga0307406_10114692 3300031901 Bacteria 1861
97 Ga0307406_10136680 3300031901 Bacteria 1729
98 Ga0307406_10192813 3300031901 Bacteria 1493
99 Ga0307412_10040027 3300031911 Bacteria 3031
100 Ga0307409_100000981 3300031995 Bacteria 13336
101 Ga0307416_100001060 3300032002 Bacteria 14663
102 Ga0307416_100057100 3300032002 Bacteria 3155
103 Ga0307411_10050521 3300032005 Bacteria 2708
104 Ga0307411_10162154 3300032005 Bacteria 1676
105 Ga0307415_100001219 3300032126 Bacteria 12054
106 Ga0307415_100043141 3300032126 Bacteria 3007
107 Ga0307415_100152905 3300032126 Bacteria 1778
108 Ga0307415_100333323 3300032126 Bacteria 1270
109 Ga0316585_10010367 3300032137 Bacteria 2734
110 Ga0316580_10000912 3300032139 Bacteria 7312
111 Ga0373943_0062514 3300035170 Unclassified 1864
112 Ga0373946_0042098 3300035171 Bacteria 1876
113 Ga0316574_0029888 3300035398 Bacteria 3295
114 Ga0316574_0109239 3300035398 Unclassified 1772
115 Ga0373931_0168743 3300035691 Bacteria 1288
116 Ga0373935_0268328 3300035692 Bacteria 1199
117 Ga0373947_0015827 3300035725 Bacteria 4332
118 Ga0373947_0421262 3300035725 Unclassified 902
119 Ga0316582_0074569 3300036647 Bacteria 2203
120 Ga0316584_0002924 3300036712 Bacteria 10977
121 Ga0316584_0527133 3300036712 Bacteria 827
122 Ga0395898_0354370 3300037466 Bacteria 1399
123 Ga0395901_0474191 3300038443 Bacteria 1277
124 Ga0436361_1095234 3300039447 Bacteria 5529
125 Ga0436363_1087087 3300039450 Bacteria 2918
126 Ga0439436_0003678 3300041404 Bacteria 4676
127 Ga0439439_0021254 3300041406 Bacteria 1616
128 Ga0439466_0022407 3300041411 Bacteria 2230
129 Ga0439457_000495 3300042014 Bacteria 11402
130 Ga0439457_027303 3300042014 Bacteria 1264
131 Ga0450894_021674 3300042131 Bacteria 869
132 Ga0450906_019489 3300042145 Bacteria 1216
133 Ga0451577_0031340 3300042876 Bacteria 4798
134 Ga0453684_0697110 3300044712 Unclassified 1104
135 Ga0451576_0000570 3300045051 Bacteria 78726
136 Ga0495603_0030807 3300046455 Bacteria 3231
137 Ga0495651_0062810 3300046462 Bacteria 2841
138 Ga0495664_0133796 3300046477 Bacteria 1502
139 Ga0495608_0058934 3300046511 Bacteria 2530
140 Ga0495640_0134426 3300046533 Bacteria 1598
141 Ga0495635_0145790 3300046663 Bacteria 1612
142 Ga0495624_0099504 3300046690 Bacteria 1791
143 Ga0495600_0321465 3300046809 Bacteria 973
144 Ga0495636_0212162 3300047318 Unclassified 887
145 Ga0495674_0152333 3300047319 Bacteria 1938
146 Ga0495676_0023997 3300047321 Bacteria 5285
147 Ga0495676_0092343 3300047321 Bacteria 2260
148 Ga0495680_0082042 3300047322 Bacteria 2433
149 Ga0495602_0221252 3300048088 Bacteria 1429
150 Ga0496101_0076993 3300048904 Bacteria 2458
151 Ga0496102_0552956 3300048905 Bacteria 1074
152 Ga0496104_0061895 3300048907 Bacteria 3548
153 Ga0496105_0020478 3300048908 Bacteria 5345
154 Ga0496106_0254377 3300048909 Bacteria 1405
155 Ga0496108_0015924 3300048911 Bacteria 6129
156 Ga0496108_0242392 3300048911 Bacteria 1568
157 Ga0496109_0091492 3300048912 Bacteria 2813
158 Ga0496109_0112423 3300048912 Bacteria 2533
159 Ga0496110_0020127 3300048913 Bacteria 5629
160 Ga0496110_0318245 3300048913 Bacteria 1417
161 Ga0496110_0406919 3300048913 Bacteria 1240
162 Ga0496111_0009112 3300048914 Bacteria 6605
163 Ga0496111_0137543 3300048914 Bacteria 1810
164 Ga0496112_0008912 3300048915 Bacteria 9004
165 Ga0496112_0203282 3300048915 Bacteria 1939
166 Ga0496113_0018223 3300048916 Bacteria 4888
167 Ga0496115_0039169 3300048918 Bacteria 3764
168 Ga0501042_0068984 3300049578 Bacteria 2529
169 Ga0501042_0158974 3300049578 Bacteria 1630
170 Ga0501071_0104899 3300049587 Bacteria 2086
171 Ga0501071_0557511 3300049587 Bacteria 880
172 Ga0501072_0003682 3300049588 Bacteria 11563
173 Ga0501075_0156232 3300049591 Bacteria 1739
174 Ga0501076_0061607 3300049592 Bacteria 2986
175 Ga0501076_0072979 3300049592 Bacteria 2747
176 Ga0501077_0020582 3300049593 Bacteria 4177
177 Ga0501249_005599 3300049679 Bacteria 2568
178 Ga0501225_0055548 3300049705 Bacteria 1108
179 Ga0501079_0069581 3300049741 Bacteria 2717
180 Ga0501045_0445073 3300049824 Bacteria 963
181 nmdc:mga05p37_646846_c1 3300050507 Bacteria 1185
182 nmdc:mga05p37_682672_c1 3300050507 Bacteria 1144
183 nmdc:mga05p37_8853_c1 3300050507 Bacteria 11892
184 nmdc:mga05p37_94405_c1 3300050507 Bacteria 3686
185 nmdc:mga09592_1285_c1 3300050508 Bacteria 20145
186 nmdc:mga09592_344931_c1 3300050508 Bacteria 1289
187 nmdc:mga09592_50807_c1 3300050508 Bacteria 3497
188 nmdc:mga0qj67_3936_c1 3300050509 Bacteria 10747
189 nmdc:mga06r32_2014_c1 3300050510 Bacteria 1411
190 nmdc:mga06r32_329397_c1 3300050510 Bacteria 1512
191 nmdc:mga06r32_42641_c1 3300050510 Bacteria 4316
192 nmdc:mga06r32_484_c1 3300050510 Bacteria 34303
193 nmdc:mga06r32_71116_c1 3300050510 Bacteria 3366
194 nmdc:mga08y16_154_c1 3300050511 Bacteria 16532
195 nmdc:mga08y16_368630_c1 3300050511 Bacteria 1473
196 nmdc:mga0n895_460560_c1 3300050512 Bacteria 1283
197 nmdc:mga0n895_763620_c1 3300050512 Bacteria 959
198 nmdc:mga0rr50_262413_c1 3300050513 Bacteria 1437
199 Ga0495619_0014424 3300053085 Bacteria 4991
200 Ga0495619_0247245 3300053085 Bacteria 1236
201 Ga0500637_0010271 3300053178 Bacteria 4796
202 Ga0501084_0063716 3300054114 Bacteria 3087
203 Ga0530510_0082733 3300061734 Unclassified 2337
204 Ga0530510_0362824 3300061734 Bacteria 1089

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300044712 Ga0453684_0697110 Ga0453684_0697110_416_1078 219
2 3300005981 Ga0081538_10110524 Ga0081538_101105241 231
3 3300048905 Ga0496102_0552956 Ga0496102_0552956_305_1063 234
4 3300009147 Ga0114129_10755066 Ga0114129_107550662 237
5 3300050507 nmdc:mga05p37_646846_c1 nmdc:mga05p37_646846_c1_40_774 237
6 3300050510 nmdc:mga06r32_42641_c1 nmdc:mga06r32_42641_c1_2023_2757 237
7 3300036712 Ga0316584_0527133 Ga0316584_0527133_71_805 238
8 3300005334 Ga0068869_100260512 Ga0068869_1002605121 241
9 3300005844 Ga0068862_100445365 Ga0068862_1004453652 241
10 3300028380 Ga0268265_10384765 Ga0268265_103847652 241
11 3300047318 Ga0495636_0212162 Ga0495636_0212162_71_814 241
12 3300042014 Ga0439457_027303 Ga0439457_027303_220_1026 248
13 3300009094 Ga0111539_10019924 Ga0111539_100199243 249
14 3300009148 Ga0105243_10392654 Ga0105243_103926542 249
15 3300009553 Ga0105249_10204050 Ga0105249_102040502 249
16 3300031665 Ga0316575_10034502 Ga0316575_100345021 249
17 3300036647 Ga0316582_0074569 Ga0316582_0074569_1225_1989 249
18 3300005365 Ga0070688_100182580 Ga0070688_1001825802 250
19 3300006844 Ga0075428_100055735 Ga0075428_1000557353 250
20 3300006847 Ga0075431_100337863 Ga0075431_1003378633 250
21 3300009147 Ga0114129_10484211 Ga0114129_104842111 250
22 3300046477 Ga0495664_0133796 Ga0495664_0133796_691_1455 250
23 3300046533 Ga0495640_0134426 Ga0495640_0134426_51_815 250
24 3300046663 Ga0495635_0145790 Ga0495635_0145790_494_1258 250
25 3300046809 Ga0495600_0321465 Ga0495600_0321465_29_793 250
26 3300047319 Ga0495674_0152333 Ga0495674_0152333_383_1147 250
27 3300048088 Ga0495602_0221252 Ga0495602_0221252_329_1093 250
28 3300038443 Ga0395901_0474191 Ga0395901_0474191_196_972 251
29 iso_pu_bacteria 8056054917 8056056661 251
30 3300053085 Ga0495619_0247245 Ga0495619_0247245_262_1023 252
31 3300005355 Ga0070671_100171372 Ga0070671_1001713722 253
32 3300009147 Ga0114129_10001243 Ga0114129_1000124311 253
33 3300009177 Ga0105248_10004265 Ga0105248_100042659 253
34 3300025941 Ga0207711_10046873 Ga0207711_100468732 253
35 3300039450 Ga0436363_1087087 Ga0436363_1087087_1868_2653 253
36 3300048911 Ga0496108_0242392 Ga0496108_0242392_56_871 253
37 3300048912 Ga0496109_0112423 Ga0496109_0112423_647_1462 253
38 3300048915 Ga0496112_0203282 Ga0496112_0203282_1026_1841 253
39 3300049587 Ga0501071_0557511 Ga0501071_0557511_65_829 253
40 3300050507 nmdc:mga05p37_8853_c1 nmdc:mga05p37_8853_c1_4711_5478 253
41 3300050509 nmdc:mga0qj67_3936_c1 nmdc:mga0qj67_3936_c1_207_989 253
42 3300031456 Ga0307513_10000002 Ga0307513_10000002392 255
43 3300041404 Ga0439436_0003678 Ga0439436_0003678_1417_2223 255
44 3300041406 Ga0439439_0021254 Ga0439439_0021254_296_1102 255
45 3300041411 Ga0439466_0022407 Ga0439466_0022407_1298_2104 255
46 3300042014 Ga0439457_000495 Ga0439457_000495_7707_8513 255
47 3300042131 Ga0450894_021674 Ga0450894_021674_14_820 255
48 3300042145 Ga0450906_019489 Ga0450906_019489_259_1065 255
49 3300031250 Ga0265331_10131411 Ga0265331_101314111 258
50 3300031251 Ga0265327_10046080 Ga0265327_100460802 258
51 3300035692 Ga0373935_0268328 Ga0373935_0268328_211_1008 258
52 3300042876 Ga0451577_0031340 Ga0451577_0031340_400_1185 258
53 3300045051 Ga0451576_0000570 Ga0451576_0000570_45685_46470 258
54 3300014968 Ga0157379_10313932 Ga0157379_103139321 259
55 3300031901 Ga0307406_10192813 Ga0307406_101928132 259
56 3300032126 Ga0307415_100152905 Ga0307415_1001529051 259
57 3300049578 Ga0501042_0158974 Ga0501042_0158974_323_1105 259
58 3300049588 Ga0501072_0003682 Ga0501072_0003682_6546_7328 259
59 3300049591 Ga0501075_0156232 Ga0501075_0156232_406_1188 259
60 3300049592 Ga0501076_0072979 Ga0501076_0072979_591_1373 259
61 3300049593 Ga0501077_0020582 Ga0501077_0020582_338_1120 259
62 3300049741 Ga0501079_0069581 Ga0501079_0069581_571_1353 259
63 3300049824 Ga0501045_0445073 Ga0501045_0445073_79_861 259
64 3300050510 nmdc:mga06r32_329397_c1 nmdc:mga06r32_329397_c1_55_873 259
65 3300054114 Ga0501084_0063716 Ga0501084_0063716_2203_2985 259
66 3300061734 Ga0530510_0082733 Ga0530510_0082733_1387_2169 259
67 3300009147 Ga0114129_10455728 Ga0114129_104557282 260
68 3300013297 Ga0157378_10532565 Ga0157378_105325651 260
69 3300031727 Ga0316576_10022521 Ga0316576_100225214 260
70 3300035691 Ga0373931_0168743 Ga0373931_0168743_434_1216 260
71 3300048913 Ga0496110_0406919 Ga0496110_0406919_367_1149 260
72 3300048914 Ga0496111_0137543 Ga0496111_0137543_92_874 260
73 3300050507 nmdc:mga05p37_682672_c1 nmdc:mga05p37_682672_c1_91_873 260
74 3300050512 nmdc:mga0n895_763620_c1 nmdc:mga0n895_763620_c1_133_915 260
75 3300006846 Ga0075430_100209803 Ga0075430_1002098031 261
76 3300009147 Ga0114129_10410087 Ga0114129_104100872 261
77 3300035170 Ga0373943_0062514 Ga0373943_0062514_156_986 261
78 3300035725 Ga0373947_0421262 Ga0373947_0421262_30_860 261
79 3300047321 Ga0495676_0092343 Ga0495676_0092343_1400_2230 261
80 3300048904 Ga0496101_0076993 Ga0496101_0076993_1214_2044 261
81 3300048907 Ga0496104_0061895 Ga0496104_0061895_2675_3505 261
82 3300048908 Ga0496105_0020478 Ga0496105_0020478_3545_4375 261
83 3300048909 Ga0496106_0254377 Ga0496106_0254377_313_1143 261
84 3300048911 Ga0496108_0015924 Ga0496108_0015924_1939_2769 261
85 3300048913 Ga0496110_0020127 Ga0496110_0020127_2415_3245 261
86 3300048914 Ga0496111_0009112 Ga0496111_0009112_3234_4064 261
87 3300048915 Ga0496112_0008912 Ga0496112_0008912_5859_6689 261
88 3300048916 Ga0496113_0018223 Ga0496113_0018223_2415_3245 261
89 3300048918 Ga0496115_0039169 Ga0496115_0039169_547_1377 261
90 3300049578 Ga0501042_0068984 Ga0501042_0068984_1435_2250 261
91 3300049587 Ga0501071_0104899 Ga0501071_0104899_948_1763 261
92 3300049592 Ga0501076_0061607 Ga0501076_0061607_1509_2324 261
93 3300032126 Ga0307415_100043141 Ga0307415_1000431412 262
94 3300048912 Ga0496109_0091492 Ga0496109_0091492_43_876 262
95 3300031691 Ga0316579_10213697 Ga0316579_102136971 263
96 3300031731 Ga0307405_10072220 Ga0307405_100722202 263
97 3300031901 Ga0307406_10114692 Ga0307406_101146922 263
98 3300031911 Ga0307412_10040027 Ga0307412_100400273 263
99 3300031995 Ga0307409_100000981 Ga0307409_10000098113 263
100 3300032002 Ga0307416_100001060 Ga0307416_10000106013 263
101 3300032126 Ga0307415_100001219 Ga0307415_1000012195 263
102 3300035398 Ga0316574_0029888 Ga0316574_0029888_880_1692 263
103 3300046462 Ga0495651_0062810 Ga0495651_0062810_512_1318 263
104 3300061734 Ga0530510_0362824 Ga0530510_0362824_39_839 263
105 iso_pu_bacteria 643348564 643600974 263
106 3300005344 Ga0070661_100422683 Ga0070661_1004226831 264
107 3300053178 Ga0500637_0010271 Ga0500637_0010271_2791_3612 264
108 3300005347 Ga0070668_100093612 Ga0070668_1000936121 265
109 3300005353 Ga0070669_100018254 Ga0070669_1000182542 265
110 3300005441 Ga0070700_100030402 Ga0070700_1000304023 265
111 3300005577 Ga0068857_100529939 Ga0068857_1005299391 265
112 3300005618 Ga0068864_100128442 Ga0068864_1001284422 265
113 3300005844 Ga0068862_100003154 Ga0068862_1000031542 265
114 3300005937 Ga0081455_10003119 Ga0081455_100031193 265
115 3300005983 Ga0081540_1005998 Ga0081540_10059983 265
116 3300006844 Ga0075428_100004973 Ga0075428_1000049738 265
117 3300006844 Ga0075428_100009608 Ga0075428_1000096082 265
118 3300006844 Ga0075428_100133213 Ga0075428_1001332133 265
119 3300006844 Ga0075428_100215021 Ga0075428_1002150211 265
120 3300006846 Ga0075430_100285296 Ga0075430_1002852962 265
121 3300006846 Ga0075430_100322162 Ga0075430_1003221622 265
122 3300006847 Ga0075431_100044595 Ga0075431_1000445954 265
123 3300006880 Ga0075429_100007213 Ga0075429_1000072134 265
124 3300009094 Ga0111539_10454759 Ga0111539_104547592 265
125 3300009147 Ga0114129_11140396 Ga0114129_111403961 265
126 3300025908 Ga0207643_10047704 Ga0207643_100477042 265
127 3300025917 Ga0207660_10078613 Ga0207660_100786133 265
128 3300025921 Ga0207652_10502966 Ga0207652_105029662 265
129 3300025923 Ga0207681_10142170 Ga0207681_101421702 265
130 3300025939 Ga0207665_10148125 Ga0207665_101481252 265
131 3300025961 Ga0207712_10171437 Ga0207712_101714372 265
132 3300025972 Ga0207668_10277685 Ga0207668_102776851 265
133 3300026116 Ga0207674_10040028 Ga0207674_100400282 265
134 3300026118 Ga0207675_100007164 Ga0207675_1000071642 265
135 3300028380 Ga0268265_10002995 Ga0268265_100029953 265
136 3300031548 Ga0307408_100036492 Ga0307408_1000364922 265
137 3300031731 Ga0307405_10159966 Ga0307405_101599661 265
138 3300032002 Ga0307416_100057100 Ga0307416_1000571003 265
139 3300032005 Ga0307411_10050521 Ga0307411_100505213 265
140 3300032005 Ga0307411_10162154 Ga0307411_101621542 265
141 3300032126 Ga0307415_100333323 Ga0307415_1003333232 265
142 3300037466 Ga0395898_0354370 Ga0395898_0354370_382_1200 265
143 3300049679 Ga0501249_005599 Ga0501249_005599_857_1675 265
144 3300049705 Ga0501225_0055548 Ga0501225_0055548_200_1018 265
145 3300050507 nmdc:mga05p37_94405_c1 nmdc:mga05p37_94405_c1_1175_1993 265
146 3300050508 nmdc:mga09592_1285_c1 nmdc:mga09592_1285_c1_12694_13515 265
147 3300050508 nmdc:mga09592_344931_c1 nmdc:mga09592_344931_c1_387_1205 265
148 3300050510 nmdc:mga06r32_2014_c1 nmdc:mga06r32_2014_c1_196_1017 265
149 3300050510 nmdc:mga06r32_71116_c1 nmdc:mga06r32_71116_c1_2186_3004 265
150 3300050511 nmdc:mga08y16_368630_c1 nmdc:mga08y16_368630_c1_531_1328 265
151 3300050512 nmdc:mga0n895_460560_c1 nmdc:mga0n895_460560_c1_252_1142 265
152 3300005364 Ga0070673_100084436 Ga0070673_1000844362 266
153 3300006844 Ga0075428_100006749 Ga0075428_1000067494 266
154 3300006847 Ga0075431_100000492 Ga0075431_1000004928 266
155 3300006880 Ga0075429_100053963 Ga0075429_1000539633 266
156 3300009094 Ga0111539_10012041 Ga0111539_100120417 266
157 3300009147 Ga0114129_10003503 Ga0114129_1000350319 266
158 3300013306 Ga0163162_10119538 Ga0163162_101195384 266
159 3300025960 Ga0207651_10037126 Ga0207651_100371264 266
160 3300027907 Ga0207428_10004043 Ga0207428_100040436 266
161 3300031548 Ga0307408_100003154 Ga0307408_1000031547 266
162 3300031901 Ga0307406_10011221 Ga0307406_100112213 266
163 3300050508 nmdc:mga09592_50807_c1 nmdc:mga09592_50807_c1_86_907 266
164 3300050510 nmdc:mga06r32_484_c1 nmdc:mga06r32_484_c1_9200_10021 266
165 3300050511 nmdc:mga08y16_154_c1 nmdc:mga08y16_154_c1_9194_10015 266
166 3300050513 nmdc:mga0rr50_262413_c1 nmdc:mga0rr50_262413_c1_47_886 266
167 3300005436 Ga0070713_100274287 Ga0070713_1002742872 267
168 3300005445 Ga0070708_100018126 Ga0070708_1000181264 267
169 3300005466 Ga0070685_10238657 Ga0070685_102386571 267
170 3300005471 Ga0070698_100535099 Ga0070698_1005350992 267
171 3300005518 Ga0070699_100005109 Ga0070699_10000510910 267
172 3300005530 Ga0070679_100059313 Ga0070679_1000593133 267
173 3300006844 Ga0075428_100653293 Ga0075428_1006532932 267
174 3300006846 Ga0075430_100036911 Ga0075430_1000369112 267
175 3300006847 Ga0075431_100435028 Ga0075431_1004350282 267
176 3300006880 Ga0075429_100051001 Ga0075429_1000510018 267
177 3300007076 Ga0075435_100170539 Ga0075435_1001705392 267
178 3300007265 Ga0099794_10032981 Ga0099794_100329813 267
179 3300009101 Ga0105247_10272197 Ga0105247_102721972 267
180 3300009147 Ga0114129_10318698 Ga0114129_103186982 267
181 3300009147 Ga0114129_10892491 Ga0114129_108924911 267
182 3300025885 Ga0207653_10010525 Ga0207653_100105252 267
183 3300025910 Ga0207684_10090102 Ga0207684_100901022 267
184 3300031242 Ga0265329_10008305 Ga0265329_100083052 267
185 3300031665 Ga0316575_10026352 Ga0316575_100263523 267
186 3300031711 Ga0265314_10000203 Ga0265314_1000020336 267
187 3300031727 Ga0316576_10072051 Ga0316576_100720512 267
188 3300031728 Ga0316578_10000515 Ga0316578_1000051512 267
189 3300031733 Ga0316577_10014567 Ga0316577_100145674 267
190 3300031901 Ga0307406_10136680 Ga0307406_101366802 267
191 3300032137 Ga0316585_10010367 Ga0316585_100103674 267
192 3300032139 Ga0316580_10000912 Ga0316580_100009122 267
193 3300035171 Ga0373946_0042098 Ga0373946_0042098_423_1331 267
194 3300035398 Ga0316574_0109239 Ga0316574_0109239_868_1683 267
195 3300035725 Ga0373947_0015827 Ga0373947_0015827_2941_3849 267
196 3300036712 Ga0316584_0002924 Ga0316584_0002924_3060_3875 267
197 3300039447 Ga0436361_1095234 Ga0436361_1095234_894_1799 267
198 3300046455 Ga0495603_0030807 Ga0495603_0030807_1674_2582 267
199 3300046511 Ga0495608_0058934 Ga0495608_0058934_285_1130 267
200 3300046690 Ga0495624_0099504 Ga0495624_0099504_386_1231 267
201 3300047321 Ga0495676_0023997 Ga0495676_0023997_485_1393 267
202 3300047322 Ga0495680_0082042 Ga0495680_0082042_702_1547 267
203 3300048913 Ga0496110_0318245 Ga0496110_0318245_38_892 267
204 3300053085 Ga0495619_0014424 Ga0495619_0014424_2356_3201 267
205 3300005290 Ga0065712_10002303 Ga0065712_100023033 268
206 3300006871 Ga0075434_100613718 Ga0075434_1006137182 268

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01875

Memo

Memo-like protein

42

296

0.93

Structural Annotation

Top 5 Hits

ID Description Score Start End
3bcz-assembly1.cif.gz_A crystal structure of memo 0.8884 10 267
7m8h-assembly4.cif.gz_D structure of memo1 c244s metal binding site mutant at 1.75a 0.8781 10 267
3bcz-assembly1.cif.gz_A crystal structure of memo 0.8539 10 267
7m8h-assembly4.cif.gz_D structure of memo1 c244s metal binding site mutant at 1.75a 0.8451 10 267
5hee-assembly1.cif.gz_B crystal structure of the tk2203 protein 0.6918 45 267
ID Description Score Start End Superfamily
af_Q54NZ1_1_286_3.40.830.10 Alpha Beta;3-Layer(aba) Sandwich;Protocatechuate 4,5-dioxygenase; Chain B;LigB-like 0.902 11 268 3.40.830.10
af_Q57846_3_287_3.40.830.10 Alpha Beta;3-Layer(aba) Sandwich;Protocatechuate 4,5-dioxygenase; Chain B;LigB-like 0.8964 10 266 3.40.830.10
af_Q9VG04_2_293_3.40.830.10 Alpha Beta;3-Layer(aba) Sandwich;Protocatechuate 4,5-dioxygenase; Chain B;LigB-like 0.8787 11 267 3.40.830.10
af_Q10212_4_309_3.40.830.10 Alpha Beta;3-Layer(aba) Sandwich;Protocatechuate 4,5-dioxygenase; Chain B;LigB-like 0.8743 11 268 3.40.830.10
af_A0A1D8PFU2_2_335_3.40.830.10 Alpha Beta;3-Layer(aba) Sandwich;Protocatechuate 4,5-dioxygenase; Chain B;LigB-like 0.8684 11 267 3.40.830.10
ID Description Score Start End GO Terms
AF-A0A162E4B5-F1-model_v4 deleted 0.9933 10 267
AF-A0A536UMP7-F1-model_v4 AmmeMemoRadiSam system protein B 0.9927 50 266
AF-A0A1Y1R7C9-F1-model_v4 MEMO1 family protein B0D91_01985 0.992 9 268
AF-A0A257WUY3-F1-model_v4 deleted 0.9905 63 266
AF-A0A261GIZ7-F1-model_v4 MEMO1 family protein BTA51_21220 0.9898 9 268

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