F314459

General Info

Members Datasets Scaffolds Average Seq Length
205 176 168 263

Family's Representative Sequence

Representative Sequence 3300053125|Ga0500618_000199|Ga0500618_000199_40710_41588
Length 292
Sequence MRKRIREEKRMSDTAANTPVNNLGHDRSRTHGKFIWCELMTSDTQAAGRFYGDVVGWKTKELQMPGMPPYHLFEIGEGENCPGIGGMMDVPAELSGKLPPNWTGYVAVDDVDATAAQFERLGGRIERAPDDIPNVGRFAVVADPHGAVLCIMAPLPPENAPREPVAGEPGTVGWRELYAGNGDEAFDFYAEVFGWTKHHDFDMGPPGSGLGVYRIFAHQGEAIGGMMTRPPTVPVACWSYYFNVEAIDAAIGRITAGGGAIVNGPMEVPGDSWIVQATDPQGAFFCLVAPKR

Samples

Sample ID Description Type Environment
1 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
2 2510917026 Rhizobium sp. CF80 Isolate Rhizosphere
3 2512564014 Sphingobium sp. AP49 Isolate Rhizosphere
4 2513237146 Rhizobium mongolense USDA 1844 (Illumina) Isolate Nodule
5 2582581294 Rhizobium sp. CF394 Isolate Rhizosphere
6 2585427633 Neorhizobium galegae bv. officinalis HAMBI 1141 Isolate Nodule
7 2585427634 Neorhizobium galegae bv. orientalis HAMBI 540 Isolate Nodule
8 2599185156 Rhizobium sp. NFR03 Isolate Rhizoplane
9 2599185170 Rhizobium mongolense USDA 1844 (PacBio) Isolate Nodule
10 2599185236 Rhizobium sp. NFR07 Isolate Rhizoplane
11 2600254933 Rhizobium sp. NFR12 Isolate Rhizoplane
12 2615840624 Rhizobium aethiopicum HBR26 Isolate Nodule
13 2615840698 Rhizobium multihospitium HAMBI 2975 Isolate Nodule
14 2667528174 Rhizobium sp. NFR17 Isolate Rhizoplane
15 2808606401 Sphingobium sp. AEW010 Isolate Rhizosphere
16 2808606404 Sphingobium sp. AEW013 Isolate Rhizosphere
17 2808606405 Sphingobium sp. AEW001 Isolate Rhizosphere
18 2818991461 Neorhizobium alkalisoli 1225 Isolate Unclassified
19 2821123053 Rhizobium cellulosilyticum 1193 Isolate Unclassified
20 2838029111 Rhizobium tropici SEMIA 4079 Isolate Nodule
21 2838035591 Rhizobium mongolense SEMIA 4087 Isolate Nodule
22 2838661181 Rhizobium mongolense SEMIA 402 Isolate Nodule
23 2838736955 Rhizobium cellulosilyticum SEMIA 448 Isolate Nodule
24 2841840854 Rhizobium cellulosilyticum SEMIA 444 Isolate Nodule
25 2842140634 Rhizobium cellulosilyticum SEMIA 452 Isolate Nodule
26 2842475841 Rhizobium tropici SEMIA 4059 Isolate Nodule
27 2842482326 Rhizobium lusitanum SEMIA 4060 Isolate Nodule
28 2842502639 Rhizobium tropici SEMIA 4063 Isolate Nodule
29 2842922631 Pararhizobium sp. R-72066 Isolate Unclassified
30 2857531043 Neorhizobium sp. R-72160 Isolate Unclassified
31 2880518877 Sphingobium sp. JAI105 Isolate Rhizosphere
32 2919171160 Neorhizobium sp. 2083 Isolate Unclassified
33 2919408235 Rhizobium miluonense 3199 Isolate Unclassified
34 2919709256 Sphingobium xenophagum 4256 Isolate Unclassified
35 3300000549 Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - LJQ_Illumina_Assembled Metagenome Rhizosphere
36 3300001904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 Metagenome Rhizosphere
37 3300001915 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C7 Metagenome Rhizosphere
38 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
39 3300002075 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4 Metagenome Rhizosphere
40 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
41 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
42 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
43 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
44 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
45 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
46 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
47 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
48 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
49 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
50 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
51 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
52 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
53 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
54 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
55 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
56 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
57 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
58 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
59 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
60 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
61 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
62 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
63 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
64 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
65 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
66 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
67 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
68 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
69 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
70 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
71 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
72 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
73 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
74 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
75 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
76 3300025228 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
77 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
78 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
79 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
80 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
81 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
82 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
83 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
84 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
85 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
101 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
102 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
103 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
105 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
106 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
107 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
108 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
109 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
110 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
111 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
112 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
113 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
114 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
115 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
116 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
117 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
118 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
119 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
120 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
121 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
122 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
123 3300038741 Seagrass microbial communities from Seahorse Key, FL, USA - SV0818 Metagenome Unclassified
124 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
125 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
126 3300042004 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 Metagenome Rhizosphere
127 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
128 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
129 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
130 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
131 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
132 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
133 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
134 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
135 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
136 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
137 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
138 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
139 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
140 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
141 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
142 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
143 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
144 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
145 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
146 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
147 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
148 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
149 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
150 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
151 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
152 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
153 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
154 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
155 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
156 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
157 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
158 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
159 3300049658 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F3_B_0_drought Metagenome Rhizosphere
160 3300049663 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought Metagenome Rhizosphere
161 3300049704 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G2_A_2_control Metagenome Rhizosphere
162 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
163 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
164 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
165 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
166 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
167 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
168 3300053091 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 endosphere Metagenome Endosphere
169 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
170 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
171 3300053157 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 endosphere Metagenome Endosphere
172 3300053158 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere Metagenome Endosphere
173 8005682033 Rhizobium dioscoreae S-93 Isolate Unclassified
174 8018127388 Rhizobium aegyptiacum 950 Isolate Nodule
175 8018150411 Rhizobium straminoryzae SM12 Isolate Rhizosphere
176 8056875544 Rhizobium halophilum TRM95001 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 81.46
Metatranscriptomes 0.49
Isolates 18.05

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 13.66
Nodule 8.78
Rhizoplane 3.9
Rhizosphere 58.05
Stem 0
Stem Tuber 0
Unclassified 15.61

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 SwRhRL2b_contig_459912 2162886007 Bacteria 2662
2 LJQas_1003169 3300000549 Bacteria 2220
3 JGI24736J21556_1001908 3300001904 Bacteria 3716
4 JGI24741J21665_1000005 3300001915 Bacteria 48785
5 JGI24740J21852_10000868 3300001979 Bacteria 13367
6 JGI24740J21852_10010723 3300001979 Bacteria 3515
7 JGI24738J21930_10001858 3300002075 Bacteria 5711
8 JGI25162J39368_1000813 3300002737 Bacteria 20590
9 JGI25162J39368_1001206 3300002737 Bacteria 15067
10 JGI25165J46597_1000468 3300003214 Bacteria 39852
11 rootH2_10166166 3300003320 Bacteria 2951
12 rootH1_10062582 3300003323 Bacteria 1595
13 Ga0055540_1004439 3300003792 Bacteria 6319
14 Ga0055531_10001643 3300003794 Bacteria 16169
15 Ga0065165_1001673 3300005262 Bacteria 22420
16 Ga0065704_10075039 3300005289 Bacteria 5827
17 Ga0070661_100031372 3300005344 Bacteria 3843
18 Ga0070668_100030763 3300005347 Bacteria 4084
19 Ga0070659_100261673 3300005366 Bacteria 1435
20 Ga0070663_100000742 3300005455 Bacteria 17648
21 Ga0070665_100040160 3300005548 Bacteria 4704
22 Ga0070665_100143583 3300005548 Bacteria 2390
23 Ga0068855_100229150 3300005563 Bacteria 2081
24 Ga0068855_100423231 3300005563 Bacteria 1456
25 Ga0070664_100159563 3300005564 Bacteria 1994
26 Ga0068856_100004097 3300005614 Bacteria 14567
27 Ga0068856_100080215 3300005614 Bacteria 3237
28 Ga0068851_10062803 3300005834 Bacteria 1906
29 Ga0075368_10000129 3300006042 Bacteria 20027
30 Ga0075364_10001375 3300006051 Bacteria 13118
31 Ga0075364_10137374 3300006051 Bacteria 1643
32 Ga0075367_10001239 3300006178 Bacteria 10744
33 Ga0079104_1000010 3300006946 Bacteria 366021
34 Ga0105251_10004978 3300009011 Bacteria 8837
35 Ga0105250_10054244 3300009092 Bacteria 1608
36 Ga0105240_10570764 3300009093 Bacteria 1249
37 Ga0105245_11040497 3300009098 Bacteria 864
38 Ga0114129_10185868 3300009147 Bacteria 2824
39 Ga0105241_10033862 3300009174 Bacteria 3836
40 Ga0105237_10005951 3300009545 Bacteria 13678
41 Ga0105238_10395376 3300009551 Bacteria 1375
42 Ga0105239_10125078 3300010375 Bacteria 2857
43 Ga0157371_10085296 3300013102 Bacteria 2237
44 Ga0157370_10156314 3300013104 Bacteria 2121
45 Ga0157370_10264960 3300013104 Bacteria 1588
46 Ga0157369_10128703 3300013105 Bacteria 2683
47 Ga0157369_10887801 3300013105 Bacteria 914
48 Ga0163161_10003705 3300017792 Bacteria 10708
49 Ga0206356_10461840 3300020070 Bacteria 1252
50 Ga0213872_10068290 3300021361 Bacteria 1604
51 Ga0209672_102587 3300025228 Bacteria 4317
52 Ga0209147_100850 3300025229 Bacteria 14307
53 Ga0209437_100036 3300025233 Bacteria 469153
54 Ga0209646_1009363 3300025246 Bacteria 1556
55 Ga0209759_1016856 3300025256 Bacteria 1824
56 Ga0209233_1000056 3300025261 Bacteria 438104
57 Ga0209758_1000303 3300025297 Bacteria 96294
58 Ga0209051_1011778 3300025303 Bacteria 4287
59 Ga0209257_1005884 3300025304 Bacteria 8274
60 Ga0207656_10006525 3300025321 Bacteria 4200
61 Ga0207713_1014970 3300025735 Bacteria 3999
62 Ga0207647_10047803 3300025904 Bacteria 2659
63 Ga0207705_10132034 3300025909 Bacteria 1859
64 Ga0207695_10225831 3300025913 Bacteria 1779
65 Ga0207671_10038306 3300025914 Bacteria 3553
66 Ga0207657_10010990 3300025919 Bacteria 8999
67 Ga0207694_10034897 3300025924 Bacteria 3857
68 Ga0207661_10514958 3300025944 Bacteria 1094
69 Ga0207667_10099687 3300025949 Bacteria 2997
70 Ga0207668_10091656 3300025972 Bacteria 2234
71 Ga0207678_10000653 3300026067 Bacteria 31868
72 Ga0207702_10002457 3300026078 Bacteria 17546
73 Ga0207702_10024878 3300026078 Bacteria 4968
74 Ga0207674_10066763 3300026116 Bacteria 3622
75 Ga0207698_10236705 3300026142 Bacteria 1661
76 Ga0209281_1000078 3300027111 Bacteria 261622
77 Ga0209371_1003389 3300027312 Bacteria 7810
78 Ga0209813_10000184 3300027866 Bacteria 19954
79 Ga0268266_10031854 3300028379 Bacteria 4479
80 Ga0265338_10125178 3300028800 Bacteria 2040
81 Ga0268256_1002857 3300030500 Bacteria 8324
82 Ga0265330_10002505 3300031235 Bacteria 9984
83 Ga0265325_10005213 3300031241 Bacteria 8067
84 Ga0265340_10021250 3300031247 Bacteria 3329
85 Ga0265339_10080084 3300031249 Bacteria 1727
86 Ga0265316_10074801 3300031344 Bacteria 2606
87 Ga0307408_100019526 3300031548 Bacteria 4564
88 Ga0265313_10018142 3300031595 Unclassified 3964
89 Ga0265342_10006507 3300031712 Bacteria 8693
90 Ga0307405_10015607 3300031731 Bacteria 4119
91 Ga0307410_10039933 3300031852 Bacteria 3085
92 Ga0307406_10046636 3300031901 Bacteria 2727
93 Ga0307407_10150272 3300031903 Bacteria 1513
94 Ga0307412_10008878 3300031911 Bacteria 5757
95 Ga0307409_100009545 3300031995 Bacteria 5970
96 Ga0307409_100063818 3300031995 Bacteria 2890
97 Ga0307409_100126391 3300031995 Bacteria 2176
98 Ga0307409_100377574 3300031995 Bacteria 1346
99 Ga0307414_10287624 3300032004 Bacteria 1384
100 Ga0307415_100000131 3300032126 Bacteria 32506
101 Ga0373935_0150677 3300035692 Bacteria 1578
102 Ga0400488_61305 3300038741 Unclassified 1126
103 Ga0436361_0499825 3300039447 Bacteria 2530
104 Ga0439465_0002035 3300041413 Bacteria 6626
105 Ga0439445_0056168 3300042004 Bacteria 1070
106 Ga0439432_047832 3300042006 Bacteria 1341
107 Ga0451577_0304287 3300042876 Bacteria 1445
108 Ga0466963_0134778 3300044694 Bacteria 1708
109 Ga0466970_0002608 3300044765 Bacteria 8691
110 Ga0495627_000993 3300046453 Bacteria 19081
111 Ga0495607_0059107 3300046501 Bacteria 2188
112 Ga0495616_0000013 3300046513 Bacteria 202334
113 Ga0495632_0000591 3300046519 Bacteria 33703
114 Ga0495637_0044959 3300046520 Bacteria 1876
115 Ga0495643_0000009 3300046522 Bacteria 344767
116 Ga0495648_0002760 3300046524 Bacteria 15853
117 Ga0495648_0135219 3300046524 Bacteria 1305
118 Ga0495663_0000003 3300046525 Bacteria 362694
119 Ga0495654_0000134 3300046530 Bacteria 77701
120 Ga0495633_0000173 3300046558 Bacteria 84576
121 Ga0495633_0001327 3300046558 Bacteria 19427
122 Ga0495633_0014017 3300046558 Bacteria 4202
123 Ga0495668_0004284 3300046616 Bacteria 10233
124 Ga0495670_0158575 3300046691 Bacteria 1188
125 Ga0495671_0000013 3300046692 Bacteria 344767
126 Ga0495681_0020394 3300047470 Bacteria 3598
127 Ga0495686_0118011 3300047472 Bacteria 1584
128 Ga0495602_0057498 3300048088 Bacteria 3411
129 Ga0496108_0000768 3300048911 Bacteria 25028
130 Ga0496110_0073566 3300048913 Bacteria 3033
131 Ga0496111_0001554 3300048914 Bacteria 13229
132 Ga0496111_0224983 3300048914 Bacteria 1394
133 Ga0496116_0049202 3300048919 Bacteria 2822
134 Ga0496117_0059422 3300048920 Bacteria 2641
135 Ga0496117_0105686 3300048920 Bacteria 1769
136 Ga0496119_0015532 3300048922 Bacteria 5852
137 Ga0496121_0000731 3300048924 Bacteria 60609
138 Ga0496121_0000889 3300048924 Bacteria 53924
139 Ga0496121_0009836 3300048924 Bacteria 10915
140 Ga0496122_0000009 3300048925 Bacteria 584024
141 Ga0496122_0067673 3300048925 Bacteria 2570
142 Ga0496122_0094164 3300048925 Bacteria 2029
143 Ga0496123_0000245 3300048926 Bacteria 109471
144 Ga0496123_0021243 3300048926 Bacteria 5050
145 Ga0496123_0208163 3300048926 Bacteria 996
146 Ga0496124_0064310 3300048927 Bacteria 3063
147 Ga0496124_0086122 3300048927 Bacteria 2572
148 Ga0496124_0115224 3300048927 Bacteria 2157
149 Ga0496125_0029346 3300048928 Bacteria 4944
150 Ga0496125_0082740 3300048928 Bacteria 2445
151 Ga0496126_0018942 3300048929 Bacteria 6799
152 Ga0501211_000170 3300049658 Bacteria 5288
153 Ga0501223_000021 3300049663 Bacteria 66697
154 Ga0501221_005529 3300049704 Bacteria 2114
155 Ga0501225_0000011 3300049705 Bacteria 74084
156 Ga0501225_0005231 3300049705 Bacteria 3819
157 Ga0501044_0304422 3300049823 Bacteria 1522
158 nmdc:mga00v17_7593_c1 3300050491 Bacteria 5794
159 nmdc:mga06z11_60_c1 3300050494 Bacteria 46715
160 nmdc:mga04h51_474_c1 3300050495 Bacteria 9638
161 nmdc:mga05p37_150292_c1 3300050507 Bacteria 2849
162 Ga0500647_0190526 3300053091 Bacteria 936
163 Ga0500618_000007 3300053125 Bacteria 226268
164 Ga0500618_000199 3300053125 Bacteria 47633
165 Ga0500618_011638 3300053125 Bacteria 2327
166 Ga0500616_0000120 3300053153 Bacteria 142980
167 Ga0500624_000028 3300053157 Bacteria 106675
168 Ga0500627_0001196 3300053158 Bacteria 7145

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300048088 Ga0495602_0057498 Ga0495602_0057498_293_1060 216
2 3300042004 Ga0439445_0056168 Ga0439445_0056168_355_1035 219
3 3300044694 Ga0466963_0134778 Ga0466963_0134778_15_683 219
4 3300028800 Ga0265338_10125178 Ga0265338_101251782 229
5 3300031235 Ga0265330_10002505 Ga0265330_100025053 229
6 3300031241 Ga0265325_10005213 Ga0265325_100052136 229
7 3300031247 Ga0265340_10021250 Ga0265340_100212502 229
8 3300031249 Ga0265339_10080084 Ga0265339_100800841 229
9 3300031344 Ga0265316_10074801 Ga0265316_100748012 229
10 3300031595 Ga0265313_10018142 Ga0265313_100181423 229
11 3300031712 Ga0265342_10006507 Ga0265342_100065073 229
12 3300042006 Ga0439432_047832 Ga0439432_047832_25_756 235
13 3300009093 Ga0105240_10570764 Ga0105240_105707641 239
14 3300048925 Ga0496122_0000009 Ga0496122_0000009_185598_186446 240
15 3300048926 Ga0496123_0000245 Ga0496123_0000245_9094_9942 240
16 3300048927 Ga0496124_0064310 Ga0496124_0064310_113_961 240
17 3300031995 Ga0307409_100126391 Ga0307409_1001263912 242
18 3300021361 Ga0213872_10068290 Ga0213872_100682902 244
19 3300039447 Ga0436361_0499825 Ga0436361_0499825_141_914 244
20 3300042876 Ga0451577_0304287 Ga0451577_0304287_297_1067 244
21 iso_pu_bacteria 2599185156 2599332262 246
22 iso_pu_bacteria 2842922631 2842924619 246
23 3300009098 Ga0105245_11040497 Ga0105245_110404971 248
24 iso_pu_bacteria 2615840624 2616296911 248
25 iso_pu_bacteria 8018127388 8018131042 248
26 3300049823 Ga0501044_0304422 Ga0501044_0304422_78_845 249
27 3300053091 Ga0500647_0190526 Ga0500647_0190526_109_906 249
28 iso_pu_bacteria 8018150411 8018154246 250
29 3300003792 Ga0055540_1004439 Ga0055540_10044393 251
30 3300003794 Ga0055531_10001643 Ga0055531_100016435 251
31 3300025297 Ga0209758_1000303 Ga0209758_100030319 251
32 3300025303 Ga0209051_1011778 Ga0209051_10117781 251
33 3300025304 Ga0209257_1005884 Ga0209257_10058845 251
34 3300035692 Ga0373935_0150677 Ga0373935_0150677_643_1404 251
35 3300046501 Ga0495607_0059107 Ga0495607_0059107_404_1237 251
36 3300046524 Ga0495648_0135219 Ga0495648_0135219_449_1282 251
37 3300046691 Ga0495670_0158575 Ga0495670_0158575_38_871 251
38 3300053125 Ga0500618_000007 Ga0500618_000007_104430_105245 251
39 3300053125 Ga0500618_011638 Ga0500618_011638_640_1473 251
40 iso_pu_bacteria 2513237146 2513927400 251
41 iso_pu_bacteria 2582581294 2585204175 251
42 iso_pu_bacteria 2599185170 2599418827 251
43 iso_pu_bacteria 2615840698 2616553743 251
44 iso_pu_bacteria 2667528174 2671112677 251
45 iso_pu_bacteria 2818991461 2819684352 251
46 iso_pu_bacteria 2838029111 2838031230 251
47 iso_pu_bacteria 2838035591 2838037485 251
48 iso_pu_bacteria 2838661181 2838663369 251
49 iso_pu_bacteria 2842475841 2842478175 251
50 iso_pu_bacteria 2842482326 2842482666 251
51 iso_pu_bacteria 2842502639 2842504984 251
52 iso_pu_bacteria 2919171160 2919171730 251
53 iso_pu_bacteria 2919408235 2919409114 251
54 iso_pu_bacteria 8005682033 8005684793 251
55 3300000549 LJQas_1003169 LJQas_10031692 252
56 3300005548 Ga0070665_100143583 Ga0070665_1001435831 252
57 3300006051 Ga0075364_10001375 Ga0075364_100013755 252
58 3300006051 Ga0075364_10137374 Ga0075364_101373742 252
59 3300006946 Ga0079104_1000010 Ga0079104_1000010257 252
60 3300027111 Ga0209281_1000078 Ga0209281_1000078137 252
61 3300031852 Ga0307410_10039933 Ga0307410_100399333 252
62 3300031995 Ga0307409_100009545 Ga0307409_1000095455 252
63 3300031995 Ga0307409_100063818 Ga0307409_1000638182 252
64 3300032126 Ga0307415_100000131 Ga0307415_10000013126 252
65 3300038741 Ga0400488_61305 Ga0400488_61305_168_956 252
66 3300048914 Ga0496111_0001554 Ga0496111_0001554_1116_1967 252
67 3300048920 Ga0496117_0105686 Ga0496117_0105686_986_1744 252
68 3300048924 Ga0496121_0000889 Ga0496121_0000889_51438_52250 252
69 3300048924 Ga0496121_0009836 Ga0496121_0009836_1852_2664 252
70 3300048925 Ga0496122_0067673 Ga0496122_0067673_319_1170 252
71 3300048926 Ga0496123_0021243 Ga0496123_0021243_2505_3356 252
72 3300048927 Ga0496124_0115224 Ga0496124_0115224_996_1808 252
73 3300050491 nmdc:mga00v17_7593_c1 nmdc:mga00v17_7593_c1_3428_4240 252
74 3300053125 Ga0500618_000199 Ga0500618_000199_40710_41588 252
75 3300053153 Ga0500616_0000120 Ga0500616_0000120_24630_25442 252
76 iso_pu_bacteria 2510917026 2511173457 252
77 iso_pu_bacteria 2585427633 2585994819 252
78 iso_pu_bacteria 2585427634 2585999358 252
79 iso_pu_bacteria 2821123053 2821123970 252
80 iso_pu_bacteria 2838736955 2838739000 252
81 iso_pu_bacteria 2841840854 2841842898 252
82 iso_pu_bacteria 2842140634 2842142679 252
83 iso_pu_bacteria 2857531043 2857531532 252
84 3300005262 Ga0065165_1001673 Ga0065165_100167312 253
85 3300046530 Ga0495654_0000134 Ga0495654_0000134_19887_20711 253
86 iso_pu_bacteria 2599185236 2599719229 253
87 3300013102 Ga0157371_10085296 Ga0157371_100852962 254
88 3300013104 Ga0157370_10264960 Ga0157370_102649602 254
89 3300013105 Ga0157369_10128703 Ga0157369_101287034 254
90 3300041413 Ga0439465_0002035 Ga0439465_0002035_3316_4104 254
91 iso_pu_bacteria 2600254933 2600375003 254
92 3300001979 JGI24740J21852_10000868 JGI24740J21852_1000086812 255
93 3300002737 JGI25162J39368_1000813 JGI25162J39368_100081322 255
94 3300002737 JGI25162J39368_1001206 JGI25162J39368_100120616 255
95 3300003214 JGI25165J46597_1000468 JGI25165J46597_100046842 255
96 3300003320 rootH2_10166166 rootH2_101661664 255
97 3300003323 rootH1_10062582 rootH1_100625821 255
98 3300005614 Ga0068856_100080215 Ga0068856_1000802153 255
99 3300009147 Ga0114129_10185868 Ga0114129_101858683 255
100 3300013105 Ga0157369_10887801 Ga0157369_108878011 255
101 3300025228 Ga0209672_102587 Ga0209672_1025874 255
102 3300025233 Ga0209437_100036 Ga0209437_100036343 255
103 3300025246 Ga0209646_1009363 Ga0209646_10093631 255
104 3300025256 Ga0209759_1016856 Ga0209759_10168562 255
105 3300025261 Ga0209233_1000056 Ga0209233_1000056249 255
106 3300026078 Ga0207702_10024878 Ga0207702_100248782 255
107 3300027312 Ga0209371_1003389 Ga0209371_10033897 255
108 3300030500 Ga0268256_1002857 Ga0268256_10028572 255
109 3300044765 Ga0466970_0002608 Ga0466970_0002608_788_1564 255
110 3300048920 Ga0496117_0059422 Ga0496117_0059422_1127_1903 255
111 3300048922 Ga0496119_0015532 Ga0496119_0015532_4216_4992 255
112 3300048926 Ga0496123_0208163 Ga0496123_0208163_62_838 255
113 3300050507 nmdc:mga05p37_150292_c1 nmdc:mga05p37_150292_c1_1039_1839 255
114 iso_pu_bacteria 8056875544 8056879879 255
115 3300005564 Ga0070664_100159563 Ga0070664_1001595634 258
116 iso_pu_bacteria 2512564014 2512645685 258
117 iso_pu_bacteria 2808606401 2809063050 258
118 iso_pu_bacteria 2808606404 2809079014 258
119 iso_pu_bacteria 2808606405 2809083611 258
120 iso_pu_bacteria 2880518877 2880520305 258
121 iso_pu_bacteria 2919709256 2919709838 261
122 3300009011 Ga0105251_10004978 Ga0105251_1000497810 262
123 3300009092 Ga0105250_10054244 Ga0105250_100542442 262
124 3300017792 Ga0163161_10003705 Ga0163161_100037054 262
125 3300025735 Ga0207713_1014970 Ga0207713_10149705 262
126 3300046558 Ga0495633_0014017 Ga0495633_0014017_2690_3487 262
127 3300048928 Ga0496125_0082740 Ga0496125_0082740_1263_2060 262
128 3300053157 Ga0500624_000028 Ga0500624_000028_23803_24600 262
129 3300046558 Ga0495633_0000173 Ga0495633_0000173_73242_74039 264
130 2162886007 SwRhRL2b_contig_459912 SwRhRL2b_0793.00004960 265
131 3300001904 JGI24736J21556_1001908 JGI24736J21556_10019086 265
132 3300001915 JGI24741J21665_1000005 JGI24741J21665_100000514 265
133 3300001979 JGI24740J21852_10010723 JGI24740J21852_100107235 265
134 3300002075 JGI24738J21930_10001858 JGI24738J21930_100018584 265
135 3300005289 Ga0065704_10075039 Ga0065704_100750396 265
136 3300005344 Ga0070661_100031372 Ga0070661_1000313724 265
137 3300005347 Ga0070668_100030763 Ga0070668_1000307632 265
138 3300005366 Ga0070659_100261673 Ga0070659_1002616733 265
139 3300005455 Ga0070663_100000742 Ga0070663_1000007429 265
140 3300005548 Ga0070665_100040160 Ga0070665_1000401602 265
141 3300005563 Ga0068855_100229150 Ga0068855_1002291502 265
142 3300005563 Ga0068855_100423231 Ga0068855_1004232311 265
143 3300005614 Ga0068856_100004097 Ga0068856_10000409715 265
144 3300005834 Ga0068851_10062803 Ga0068851_100628034 265
145 3300006042 Ga0075368_10000129 Ga0075368_1000012916 265
146 3300006178 Ga0075367_10001239 Ga0075367_100012396 265
147 3300009174 Ga0105241_10033862 Ga0105241_100338624 265
148 3300009545 Ga0105237_10005951 Ga0105237_100059518 265
149 3300009551 Ga0105238_10395376 Ga0105238_103953762 265
150 3300010375 Ga0105239_10125078 Ga0105239_101250784 265
151 3300013104 Ga0157370_10156314 Ga0157370_101563142 265
152 3300020070 Ga0206356_10461840 Ga0206356_104618402 265
153 3300025229 Ga0209147_100850 Ga0209147_10085012 265
154 3300025321 Ga0207656_10006525 Ga0207656_100065255 265
155 3300025904 Ga0207647_10047803 Ga0207647_100478032 265
156 3300025909 Ga0207705_10132034 Ga0207705_101320343 265
157 3300025913 Ga0207695_10225831 Ga0207695_102258311 265
158 3300025914 Ga0207671_10038306 Ga0207671_100383063 265
159 3300025919 Ga0207657_10010990 Ga0207657_100109905 265
160 3300025924 Ga0207694_10034897 Ga0207694_100348974 265
161 3300025944 Ga0207661_10514958 Ga0207661_105149582 265
162 3300025949 Ga0207667_10099687 Ga0207667_100996872 265
163 3300025972 Ga0207668_10091656 Ga0207668_100916562 265
164 3300026067 Ga0207678_10000653 Ga0207678_1000065320 265
165 3300026078 Ga0207702_10002457 Ga0207702_100024576 265
166 3300026116 Ga0207674_10066763 Ga0207674_100667634 265
167 3300026142 Ga0207698_10236705 Ga0207698_102367052 265
168 3300027866 Ga0209813_10000184 Ga0209813_1000018416 265
169 3300028379 Ga0268266_10031854 Ga0268266_100318544 265
170 3300031548 Ga0307408_100019526 Ga0307408_1000195265 265
171 3300031731 Ga0307405_10015607 Ga0307405_100156074 265
172 3300031901 Ga0307406_10046636 Ga0307406_100466363 265
173 3300031903 Ga0307407_10150272 Ga0307407_101502723 265
174 3300031911 Ga0307412_10008878 Ga0307412_100088784 265
175 3300031995 Ga0307409_100377574 Ga0307409_1003775742 265
176 3300032004 Ga0307414_10287624 Ga0307414_102876243 265
177 3300046453 Ga0495627_000993 Ga0495627_000993_15865_16665 265
178 3300046513 Ga0495616_0000013 Ga0495616_0000013_73858_74658 265
179 3300046519 Ga0495632_0000591 Ga0495632_0000591_31110_31910 265
180 3300046520 Ga0495637_0044959 Ga0495637_0044959_108_908 265
181 3300046522 Ga0495643_0000009 Ga0495643_0000009_321944_322744 265
182 3300046524 Ga0495648_0002760 Ga0495648_0002760_6523_7323 265
183 3300046525 Ga0495663_0000003 Ga0495663_0000003_150484_151284 265
184 3300046558 Ga0495633_0001327 Ga0495633_0001327_9906_10706 265
185 3300046616 Ga0495668_0004284 Ga0495668_0004284_7678_8478 265
186 3300046692 Ga0495671_0000013 Ga0495671_0000013_321944_322744 265
187 3300047470 Ga0495681_0020394 Ga0495681_0020394_1732_2532 265
188 3300047472 Ga0495686_0118011 Ga0495686_0118011_729_1529 265
189 3300048911 Ga0496108_0000768 Ga0496108_0000768_14244_15041 265
190 3300048913 Ga0496110_0073566 Ga0496110_0073566_2102_2899 265
191 3300048914 Ga0496111_0224983 Ga0496111_0224983_541_1338 265
192 3300048919 Ga0496116_0049202 Ga0496116_0049202_1850_2647 265
193 3300048924 Ga0496121_0000731 Ga0496121_0000731_46803_47600 265
194 3300048925 Ga0496122_0094164 Ga0496122_0094164_1177_1974 265
195 3300048927 Ga0496124_0086122 Ga0496124_0086122_487_1284 265
196 3300048928 Ga0496125_0029346 Ga0496125_0029346_2848_3645 265
197 3300048929 Ga0496126_0018942 Ga0496126_0018942_163_960 265
198 3300049658 Ga0501211_000170 Ga0501211_000170_3605_4402 265
199 3300049663 Ga0501223_000021 Ga0501223_000021_3690_4487 265
200 3300049704 Ga0501221_005529 Ga0501221_005529_167_970 265
201 3300049705 Ga0501225_0000011 Ga0501225_0000011_3704_4501 265
202 3300049705 Ga0501225_0005231 Ga0501225_0005231_2289_3095 265
203 3300050494 nmdc:mga06z11_60_c1 nmdc:mga06z11_60_c1_31449_32252 265
204 3300050495 nmdc:mga04h51_474_c1 nmdc:mga04h51_474_c1_4180_4983 265
205 3300053158 Ga0500627_0001196 Ga0500627_0001196_1751_2551 265

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00903

Glyoxalase

Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily

171

287

0.82

PF00903

Glyoxalase

Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily

33

151

0.79

PF18029

Glyoxalase_6

Glyoxalase-like domain

36

152

0.72

Structural Annotation

Top 5 Hits

ID Description Score Start End
3oxh-assembly1.cif.gz_A mycobacterium tuberculosis kinase inhibitor homolog rv0577 0.9101 5 262
3oxh-assembly1.cif.gz_A mycobacterium tuberculosis kinase inhibitor homolog rv0577 0.8486 5 262
3hdp-assembly1.cif.gz_A crystal structure of the ni(ii)-bound glyoxalase-i from clostridium acetobutylicum 0.7585 7 125
4lqb-assembly1.cif.gz_B crystal structure of uncharacterized protein kfla3161 0.7409 8 130
2r6u-assembly2.cif.gz_D crystal structure of gene product rha04853 from rhodococcus sp. rha1 0.7404 1 128
ID Description Score Start End Superfamily
3oxhA02 Alpha Beta;Roll;2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1;2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.9274 2 127 3.10.180.10
3oxhA02 Alpha Beta;Roll;2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1;2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.9197 2 127 3.10.180.10
af_I6XA34_8_128_3.10.180.10 Alpha Beta;Roll;2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1;2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.9155 5 126 3.10.180.10
af_I6XA34_134_256_3.10.180.10 Alpha Beta;Roll;2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1;2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.8873 5 124 3.10.180.10
af_I6XA34_8_128_3.10.180.10 Alpha Beta;Roll;2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1;2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.88 5 126 3.10.180.10
ID Description Score Start End GO Terms
AF-A0A7W9QXC0-F1-model_v4 deleted 0.9896 1 265
AF-M4C653-F1-model_v4 VOC domain-containing protein 0.9858 59 265
AF-M4C653-F1-model_v4 VOC domain-containing protein 0.9764 59 265
AF-A0A2Z6AA25-F1-model_v4 VOC domain-containing protein 0.9677 132 265
AF-A0A435GNN1-F1-model_v4 VOC family protein 0.9561 77 264

Feature Viewer

pLDDT pTM Quality
92.37 0.9 High
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Predicted Structure (AlphaFold2)

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