F314212

General Info

Members Datasets Scaffolds Average Seq Length
205 139 410 215

Family's Representative Sequence

Representative Sequence 3300044694|Ga0466963_0003562|Ga0466963_0003562_3173_3853
Length 226
Sequence MRVVIADDEVLLREGLERLLSEAGHDVVGKVGTAEELYRKVDLTRPDVAIVDIRMPPTHTDEGLVAAAELREAHSELGVLVLSHYLSSSYALRLIEEHPGGTGYLLKERVSDLALLTDALARLHEGECVVDPTIVARLVAHPRPASVLDELTDRERQVLALIAEGRSNKGISELLFLSSKTVEAHVKHIFMKLGIEMSPDDHRRVLAVLAYLRATGRSPGDAPSDS

Samples

Sample ID Description Type Environment
1 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
2 3300003373 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
3 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
4 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
5 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
6 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
7 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
8 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
9 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
10 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
11 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
12 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
13 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
14 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
15 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
16 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
17 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
18 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
19 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
20 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
21 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
22 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
23 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
24 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
25 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
26 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
27 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
28 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
29 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
30 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
31 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
32 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
33 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
34 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
35 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
36 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
37 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
38 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
39 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
57 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
60 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
61 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
62 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
63 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
64 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
65 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
66 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
67 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
68 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
69 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
70 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
71 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
72 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
73 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
74 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
75 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
76 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
77 3300042016 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z071817_5357 Metagenome Rhizosphere
78 3300042993 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821LE14Z071817_5372 Metagenome Rhizosphere
79 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
80 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
81 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
82 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
83 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
84 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
85 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
86 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
87 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
88 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
89 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
90 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
91 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
92 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
93 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
94 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
95 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
96 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
97 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
98 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
99 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
100 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
101 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
102 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
103 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
104 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
105 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
106 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
107 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
108 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
109 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
110 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
111 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
112 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
113 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
114 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
115 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
116 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
117 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
118 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
119 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
120 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
121 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
122 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
123 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
124 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
125 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
126 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
127 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
128 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
129 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
130 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
131 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
132 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
133 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
134 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
135 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
136 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
137 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
138 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
139 2675903059 Asanoa hainanensis CGMCC 4.5593 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.51
Metatranscriptomes 0
Isolates 0.49

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.95
Nodule 0
Rhizoplane 6.34
Rhizosphere 91.22
Stem 0
Stem Tuber 0
Unclassified 0.49

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0466963_0003562 3300044694 Bacteria 8944
2 JGI25407J50210_10015303 3300003373 Bacteria 1981
3 JGI25407J50210_10027525 3300003373 Bacteria 1474
4 Ga0070668_100011314 3300005347 Bacteria 6647
5 Ga0070668_100142752 3300005347 Bacteria 1931
6 Ga0070674_100009461 3300005356 Bacteria 5835
7 Ga0070710_10329073 3300005437 Bacteria 1005
8 Ga0070700_100090871 3300005441 Bacteria 1992
9 Ga0070662_100006775 3300005457 Bacteria 7408
10 Ga0070662_100007353 3300005457 Bacteria 7135
11 Ga0070707_100689534 3300005468 Bacteria 984
12 Ga0068857_101205227 3300005577 Bacteria 733
13 Ga0068854_100096660 3300005578 Bacteria 2207
14 Ga0068852_100694794 3300005616 Bacteria 1027
15 Ga0068861_100001801 3300005719 Bacteria 13804
16 Ga0068861_100008041 3300005719 Bacteria 7258
17 Ga0068858_100019079 3300005842 Bacteria 6414
18 Ga0068860_100066191 3300005843 Bacteria 3432
19 Ga0068862_100070208 3300005844 Bacteria 3024
20 Ga0081455_10010211 3300005937 Bacteria 9552
21 Ga0081455_10231035 3300005937 Bacteria 1365
22 Ga0081455_10257001 3300005937 Bacteria 1274
23 Ga0081455_10337415 3300005937 Bacteria 1068
24 Ga0081538_10000616 3300005981 Bacteria 39495
25 Ga0081538_10004062 3300005981 Bacteria 13620
26 Ga0081539_10011778 3300005985 Bacteria 6853
27 Ga0070717_10042568 3300006028 Bacteria 3704
28 Ga0075365_10123747 3300006038 Bacteria 1786
29 Ga0075432_10018339 3300006058 Bacteria 2387
30 Ga0075432_10265555 3300006058 Bacteria 701
31 Ga0075367_10287180 3300006178 Bacteria 1035
32 Ga0075428_100296884 3300006844 Bacteria 1737
33 Ga0075428_100573845 3300006844 Bacteria 1205
34 Ga0075430_100044693 3300006846 Bacteria 3744
35 Ga0075430_100128534 3300006846 Bacteria 2112
36 Ga0075431_100031541 3300006847 Bacteria 5459
37 Ga0075431_100437171 3300006847 Bacteria 1306
38 Ga0075429_100009595 3300006880 Bacteria 8392
39 Ga0075429_100230306 3300006880 Bacteria 1623
40 Ga0075429_100335303 3300006880 Bacteria 1324
41 Ga0111539_10045164 3300009094 Bacteria 5275
42 Ga0111539_11037500 3300009094 Bacteria 953
43 Ga0105245_10001338 3300009098 Bacteria 22314
44 Ga0105245_10001984 3300009098 Bacteria 18590
45 Ga0114129_10070343 3300009147 Bacteria 4879
46 Ga0114129_10096906 3300009147 Bacteria 4083
47 Ga0114129_10492304 3300009147 Bacteria 1602
48 Ga0105243_10486977 3300009148 Bacteria 1165
49 Ga0105249_10003378 3300009553 Bacteria 13822
50 Ga0105249_10012450 3300009553 Bacteria 7499
51 Ga0105249_10646866 3300009553 Bacteria 1115
52 Ga0105239_10266394 3300010375 Bacteria 1926
53 Ga0157371_10687795 3300013102 Bacteria 765
54 Ga0157378_10932003 3300013297 Bacteria 900
55 Ga0163162_10065596 3300013306 Bacteria 3678
56 Ga0163162_10329622 3300013306 Bacteria 1659
57 Ga0157372_10496238 3300013307 Bacteria 1423
58 Ga0163163_10082059 3300014325 Bacteria 3227
59 Ga0157380_10776048 3300014326 Bacteria 973
60 Ga0157380_10848603 3300014326 Bacteria 935
61 Ga0207688_10031210 3300025901 Bacteria 2940
62 Ga0207645_10046925 3300025907 Bacteria 2759
63 Ga0207646_10546181 3300025922 Bacteria 1042
64 Ga0207694_10095683 3300025924 Bacteria 2348
65 Ga0207687_10005687 3300025927 Bacteria 8241
66 Ga0207687_10031826 3300025927 Bacteria 3569
67 Ga0207706_10001340 3300025933 Bacteria 24589
68 Ga0207706_10009309 3300025933 Bacteria 9018
69 Ga0207669_10111404 3300025937 Bacteria 1835
70 Ga0207704_10478823 3300025938 Bacteria 999
71 Ga0207667_10075291 3300025949 Bacteria 3505
72 Ga0207712_10029323 3300025961 Bacteria 3690
73 Ga0207712_10030950 3300025961 Bacteria 3601
74 Ga0207668_10029056 3300025972 Bacteria 3621
75 Ga0207668_10061503 3300025972 Bacteria 2641
76 Ga0207668_10294601 3300025972 Bacteria 1336
77 Ga0207677_10141719 3300026023 Bacteria 1841
78 Ga0207703_10082681 3300026035 Bacteria 2681
79 Ga0207678_11027214 3300026067 Bacteria 730
80 Ga0207708_10046639 3300026075 Bacteria 3299
81 Ga0207675_100001652 3300026118 Bacteria 22310
82 Ga0207675_100003291 3300026118 Bacteria 15821
83 Ga0207698_10487170 3300026142 Bacteria 1197
84 Ga0207428_10010984 3300027907 Bacteria 8053
85 Ga0268265_10108520 3300028380 Bacteria 2260
86 Ga0268264_10072668 3300028381 Bacteria 2917
87 Ga0307513_10026947 3300031456 Bacteria 6611
88 Ga0307405_10010764 3300031731 Bacteria 4756
89 Ga0307405_10273878 3300031731 Bacteria 1267
90 Ga0307413_10020504 3300031824 Bacteria 3517
91 Ga0307410_10011226 3300031852 Bacteria 5112
92 Ga0307410_10030556 3300031852 Bacteria 3444
93 Ga0307406_10000173 3300031901 Bacteria 38498
94 Ga0307406_10019254 3300031901 Bacteria 4003
95 Ga0307407_10004607 3300031903 Bacteria 5879
96 Ga0307407_10067225 3300031903 Unclassified 2117
97 Ga0307412_10422042 3300031911 Bacteria 1091
98 Ga0307409_100000278 3300031995 Bacteria 20727
99 Ga0307409_100010054 3300031995 Bacteria 5853
100 Ga0307416_100009384 3300032002 Bacteria 6400
101 Ga0307416_100010500 3300032002 Bacteria 6119
102 Ga0307414_10037758 3300032004 Bacteria 3237
103 Ga0307411_10019298 3300032005 Bacteria 3935
104 Ga0307415_100058623 3300032126 Bacteria 2651
105 Ga0307415_100539259 3300032126 Bacteria 1027
106 Ga0373926_0286521 3300035083 Bacteria 642
107 Ga0373939_0100000 3300035114 Bacteria 994
108 Ga0373954_0376651 3300035118 Bacteria 701
109 Ga0395900_0783910 3300037418 Bacteria 882
110 Ga0395905_0442808 3300037471 Bacteria 1197
111 Ga0395901_0065523 3300038443 Bacteria 3783
112 Ga0395901_0101443 3300038443 Bacteria 3020
113 Ga0439463_004203 3300042016 Bacteria 3613
114 Ga0439440_0040805 3300042993 Bacteria 1130
115 Ga0466961_0043749 3300044693 Bacteria 2867
116 Ga0466961_0164301 3300044693 Bacteria 1383
117 Ga0466963_0022194 3300044694 Bacteria 4017
118 Ga0466963_0039125 3300044694 Bacteria 3105
119 Ga0466963_0067445 3300044694 Bacteria 2401
120 Ga0466964_0030755 3300044706 Bacteria 2126
121 Ga0466957_0146052 3300044842 Bacteria 1527
122 Ga0466957_0185369 3300044842 Bacteria 1361
123 Ga0466959_0031465 3300045049 Bacteria 3925
124 Ga0466959_0148111 3300045049 Bacteria 1656
125 Ga0466958_0013295 3300045836 Bacteria 4683
126 Ga0466958_0054552 3300045836 Bacteria 2424
127 Ga0466967_0001522 3300045976 Bacteria 13555
128 Ga0466967_0104892 3300045976 Bacteria 2589
129 Ga0466967_0316499 3300045976 Bacteria 1504
130 Ga0495592_0355433 3300046454 Bacteria 938
131 Ga0495653_0200009 3300046463 Bacteria 1357
132 Ga0495653_0245672 3300046463 Bacteria 1190
133 Ga0495582_0188877 3300046473 Bacteria 1175
134 Ga0495608_0108339 3300046511 Bacteria 1787
135 Ga0495628_0069938 3300046516 Bacteria 2737
136 Ga0495652_0125718 3300046529 Bacteria 2037
137 Ga0495640_0168070 3300046533 Bacteria 1402
138 Ga0495586_0027077 3300046535 Bacteria 3068
139 Ga0495634_0120512 3300046642 Bacteria 1680
140 Ga0495635_0515263 3300046663 Bacteria 786
141 Ga0495604_0336019 3300047317 Bacteria 1007
142 Ga0495674_0175294 3300047319 Bacteria 1787
143 Ga0495680_0434726 3300047322 Bacteria 901
144 Ga0495684_0192192 3300047471 Bacteria 1509
145 Ga0496101_0062551 3300048904 Bacteria 2706
146 Ga0496102_0061647 3300048905 Bacteria 3433
147 Ga0496102_0685270 3300048905 Bacteria 948
148 Ga0496104_0105912 3300048907 Bacteria 2695
149 Ga0496106_0137575 3300048909 Bacteria 1919
150 Ga0496108_0090943 3300048911 Bacteria 2594
151 Ga0496108_1109608 3300048911 Bacteria 672
152 Ga0496109_0014826 3300048912 Bacteria 6783
153 Ga0496109_0126783 3300048912 Bacteria 2380
154 Ga0496110_0421289 3300048913 Bacteria 1217
155 Ga0496112_0192815 3300048915 Bacteria 1999
156 Ga0496113_0016942 3300048916 Bacteria 5045
157 Ga0496115_0045901 3300048918 Bacteria 3489
158 Ga0501031_0027503 3300049568 Bacteria 3708
159 Ga0501032_0398659 3300049569 Bacteria 884
160 Ga0501038_0095781 3300049574 Bacteria 2479
161 Ga0501039_0063316 3300049575 Bacteria 2866
162 Ga0501041_0192504 3300049577 Bacteria 1278
163 Ga0501041_0421503 3300049577 Bacteria 846
164 Ga0501042_0206500 3300049578 Bacteria 1416
165 Ga0501042_0207931 3300049578 Bacteria 1411
166 Ga0501048_0418808 3300049582 Bacteria 958
167 Ga0501069_0078867 3300049585 Bacteria 1853
168 Ga0501071_0261504 3300049587 Bacteria 1307
169 Ga0501072_0306957 3300049588 Bacteria 1261
170 Ga0501073_0439007 3300049589 Bacteria 902
171 Ga0501075_0042717 3300049591 Bacteria 3400
172 Ga0501076_0292169 3300049592 Bacteria 1335
173 Ga0501076_0425102 3300049592 Bacteria 1093
174 Ga0501077_0398777 3300049593 Bacteria 879
175 Ga0501079_0305770 3300049741 Bacteria 1244
176 Ga0501079_0475089 3300049741 Bacteria 982
177 Ga0501081_0087552 3300049743 Bacteria 2188
178 Ga0501045_0153093 3300049824 Bacteria 1716
179 Ga0501045_0397665 3300049824 Bacteria 1025
180 nmdc:mga0yw44_141996_c1 3300050492 Bacteria 1561
181 nmdc:mga06z11_210389_c1 3300050494 Bacteria 1133
182 nmdc:mga05p37_1197091_c1 3300050507 Bacteria 785
183 nmdc:mga05p37_129645_c1 3300050507 Bacteria 3095
184 nmdc:mga05p37_403512_c1 3300050507 Bacteria 1596
185 nmdc:mga05p37_472099_c1 3300050507 Bacteria 1447
186 nmdc:mga05p37_61520_c1 3300050507 Bacteria 4622
187 nmdc:mga09592_104701_c1 3300050508 Bacteria 2425
188 nmdc:mga09592_11603_c1 3300050508 Bacteria 7166
189 nmdc:mga0qj67_185818_c1 3300050509 Bacteria 1688
190 nmdc:mga0qj67_201381_c1 3300050509 Bacteria 1618
191 nmdc:mga0qj67_49407_c1 3300050509 Bacteria 3325
192 nmdc:mga06r32_113290_c1 3300050510 Bacteria 2670
193 nmdc:mga06r32_246738_c1 3300050510 Bacteria 1773
194 nmdc:mga06r32_769824_c1 3300050510 Bacteria 925
195 nmdc:mga08y16_222307_c1 3300050511 Bacteria 1955
196 nmdc:mga0n895_148776_c1 3300050512 Bacteria 2371
197 Ga0495601_0057484 3300053077 Bacteria 2464
198 Ga0495601_0344511 3300053077 Bacteria 969
199 Ga0495612_0134978 3300053078 Bacteria 1068
200 Ga0501084_0343627 3300054114 Bacteria 1260
201 Ga0501082_0522714 3300060353 Bacteria 1037
202 Ga0530510_0049409 3300061734 Bacteria 3040
203 Ga0530510_0448137 3300061734 Bacteria 976
204 Ga0530510_0644342 3300061734 Bacteria 807
205 2676485609 2675903059 Bacteria 8644972
206 Ga0466963_0003562
207 JGI25407J50210_10015303
208 JGI25407J50210_10027525
209 Ga0070668_100011314
210 Ga0070668_100142752
211 Ga0070674_100009461
212 Ga0070710_10329073
213 Ga0070700_100090871
214 Ga0070662_100006775
215 Ga0070662_100007353
216 Ga0070707_100689534
217 Ga0068857_101205227
218 Ga0068854_100096660
219 Ga0068852_100694794
220 Ga0068861_100001801
221 Ga0068861_100008041
222 Ga0068858_100019079
223 Ga0068860_100066191
224 Ga0068862_100070208
225 Ga0081455_10010211
226 Ga0081455_10231035
227 Ga0081455_10257001
228 Ga0081455_10337415
229 Ga0081538_10000616
230 Ga0081538_10004062
231 Ga0081539_10011778
232 Ga0070717_10042568
233 Ga0075365_10123747
234 Ga0075432_10018339
235 Ga0075432_10265555
236 Ga0075367_10287180
237 Ga0075428_100296884
238 Ga0075428_100573845
239 Ga0075430_100044693
240 Ga0075430_100128534
241 Ga0075431_100031541
242 Ga0075431_100437171
243 Ga0075429_100009595
244 Ga0075429_100230306
245 Ga0075429_100335303
246 Ga0111539_10045164
247 Ga0111539_11037500
248 Ga0105245_10001338
249 Ga0105245_10001984
250 Ga0114129_10070343
251 Ga0114129_10096906
252 Ga0114129_10492304
253 Ga0105243_10486977
254 Ga0105249_10003378
255 Ga0105249_10012450
256 Ga0105249_10646866
257 Ga0105239_10266394
258 Ga0157371_10687795
259 Ga0157378_10932003
260 Ga0163162_10065596
261 Ga0163162_10329622
262 Ga0157372_10496238
263 Ga0163163_10082059
264 Ga0157380_10776048
265 Ga0157380_10848603
266 Ga0207688_10031210
267 Ga0207645_10046925
268 Ga0207646_10546181
269 Ga0207694_10095683
270 Ga0207687_10005687
271 Ga0207687_10031826
272 Ga0207706_10001340
273 Ga0207706_10009309
274 Ga0207669_10111404
275 Ga0207704_10478823
276 Ga0207667_10075291
277 Ga0207712_10029323
278 Ga0207712_10030950
279 Ga0207668_10029056
280 Ga0207668_10061503
281 Ga0207668_10294601
282 Ga0207677_10141719
283 Ga0207703_10082681
284 Ga0207678_11027214
285 Ga0207708_10046639
286 Ga0207675_100001652
287 Ga0207675_100003291
288 Ga0207698_10487170
289 Ga0207428_10010984
290 Ga0268265_10108520
291 Ga0268264_10072668
292 Ga0307513_10026947
293 Ga0307405_10010764
294 Ga0307405_10273878
295 Ga0307413_10020504
296 Ga0307410_10011226
297 Ga0307410_10030556
298 Ga0307406_10000173
299 Ga0307406_10019254
300 Ga0307407_10004607
301 Ga0307407_10067225
302 Ga0307412_10422042
303 Ga0307409_100000278
304 Ga0307409_100010054
305 Ga0307416_100009384
306 Ga0307416_100010500
307 Ga0307414_10037758
308 Ga0307411_10019298
309 Ga0307415_100058623
310 Ga0307415_100539259
311 Ga0373926_0286521
312 Ga0373939_0100000
313 Ga0373954_0376651
314 Ga0395900_0783910
315 Ga0395905_0442808
316 Ga0395901_0065523
317 Ga0395901_0101443
318 Ga0439463_004203
319 Ga0439440_0040805
320 Ga0466961_0043749
321 Ga0466961_0164301
322 Ga0466963_0022194
323 Ga0466963_0039125
324 Ga0466963_0067445
325 Ga0466964_0030755
326 Ga0466957_0146052
327 Ga0466957_0185369
328 Ga0466959_0031465
329 Ga0466959_0148111
330 Ga0466958_0013295
331 Ga0466958_0054552
332 Ga0466967_0001522
333 Ga0466967_0104892
334 Ga0466967_0316499
335 Ga0495592_0355433
336 Ga0495653_0200009
337 Ga0495653_0245672
338 Ga0495582_0188877
339 Ga0495608_0108339
340 Ga0495628_0069938
341 Ga0495652_0125718
342 Ga0495640_0168070
343 Ga0495586_0027077
344 Ga0495634_0120512
345 Ga0495635_0515263
346 Ga0495604_0336019
347 Ga0495674_0175294
348 Ga0495680_0434726
349 Ga0495684_0192192
350 Ga0496101_0062551
351 Ga0496102_0061647
352 Ga0496102_0685270
353 Ga0496104_0105912
354 Ga0496106_0137575
355 Ga0496108_0090943
356 Ga0496108_1109608
357 Ga0496109_0014826
358 Ga0496109_0126783
359 Ga0496110_0421289
360 Ga0496112_0192815
361 Ga0496113_0016942
362 Ga0496115_0045901
363 Ga0501031_0027503
364 Ga0501032_0398659
365 Ga0501038_0095781
366 Ga0501039_0063316
367 Ga0501041_0192504
368 Ga0501041_0421503
369 Ga0501042_0206500
370 Ga0501042_0207931
371 Ga0501048_0418808
372 Ga0501069_0078867
373 Ga0501071_0261504
374 Ga0501072_0306957
375 Ga0501073_0439007
376 Ga0501075_0042717
377 Ga0501076_0292169
378 Ga0501076_0425102
379 Ga0501077_0398777
380 Ga0501079_0305770
381 Ga0501079_0475089
382 Ga0501081_0087552
383 Ga0501045_0153093
384 Ga0501045_0397665
385 nmdc:mga0yw44_141996_c1
386 nmdc:mga06z11_210389_c1
387 nmdc:mga05p37_1197091_c1
388 nmdc:mga05p37_129645_c1
389 nmdc:mga05p37_403512_c1
390 nmdc:mga05p37_472099_c1
391 nmdc:mga05p37_61520_c1
392 nmdc:mga09592_104701_c1
393 nmdc:mga09592_11603_c1
394 nmdc:mga0qj67_185818_c1
395 nmdc:mga0qj67_201381_c1
396 nmdc:mga0qj67_49407_c1
397 nmdc:mga06r32_113290_c1
398 nmdc:mga06r32_246738_c1
399 nmdc:mga06r32_769824_c1
400 nmdc:mga08y16_222307_c1
401 nmdc:mga0n895_148776_c1
402 Ga0495601_0057484
403 Ga0495601_0344511
404 Ga0495612_0134978
405 Ga0501084_0343627
406 Ga0501082_0522714
407 Ga0530510_0049409
408 Ga0530510_0448137
409 Ga0530510_0644342
410 2676485609

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00196

GerE

Bacterial regulatory proteins, luxR family

149

209

0.95

PF00072

Response_reg

Response regulator receiver domain

3

120

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
7vim-assembly1.cif.gz_A the c-terminal dna binding domain of esrb from edwardsiella piscicida 0.9939 151 194
8hnp-assembly1.cif.gz_B archaeal transcription factor mutant 0.9372 151 194
4qic-assembly1.cif.gz_A co-crystal structure of anti-anti-sigma factor phyr complexed with anti-sigma factor nepr from bartonella quintana 0.9334 2 79
4wul-assembly1.cif.gz_A crystal structure of e. faecalis dna binding domain liard191n complexed with 26bp dna 0.9332 149 210
1je8-assembly2.cif.gz_E two-component response regulator narl/dna complex: dna bending found in a high affinity site 0.927 149 210
ID Description Score Start End Superfamily
5f64B02 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9302 147 211 1.10.10.10
1rnlA02 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9279 150 209 1.10.10.10
af_O69730_8_88_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9269 1 83 3.40.50.2300
4qicC02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9266 1 79 3.40.50.2300
af_P9WGM1_5_87_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9222 2 83 3.40.50.2300
ID Description Score Start End GO Terms
AF-A9WTE0-F1-model_v4 Two-component response regulator 0.9949 1 85 GO:0000160
AF-A0A538JGH7-F1-model_v4 Response regulator 0.9931 2 132 GO:0000160
GO:0004016
GO:0009190
AF-A0A260LY16-F1-model_v4 Response regulatory domain-containing protein 0.9877 1 85 GO:0000160
GO:0003677
AF-A0A7Y6I3K8-F1-model_v4 Response regulator transcription factor 0.9809 1 134 GO:0000160
GO:0003677
AF-A0A1Z1W4E9-F1-model_v4 LuxR family transcriptional regulator 0.9749 1 137 GO:0000160

Map