F312598

General Info

Members Datasets Scaffolds Average Seq Length
204 159 204 689

Family's Representative Sequence

Representative Sequence 3300025906|Ga0207699_10048211|Ga0207699_100482112
Length 711
Sequence MRRLLDRVTRELVVPREEDDGAKTLLESEWLVTNGLGGYASGTPAGVNTRRYHGVLVAALPNPIGRLVMLNHLSEFVCVAGGAPTALGGEERVAGRLDRDVARRLAAFRLEAGLPVWDYEWGGATIEKRLFMPHKQNTVYIRYCLTKGDSPVRLELHPALHFRSYEAPVNVKIATRYSLAQSAGYYLFESGDPQLPPLRMRIDGSSPSFVHDERVTSEFLYPVEEQRGYEFRGTLWAPGRFEIELLPNVPVTLIASAESEEVMSALSPIEALGCEEERRRRLLDAAIATHPDTADEVAAELVLAADQFIFSPAGRVVDSTRAAATGDEIRSIIAGYHWFTDWGRDTMISLEGLTLVTGRHREAGFILRTFEHYVRDGLIPNMFPDGSNEGLYHTADATLWFFHALHRYVEVTDDRRTLVRALPTLQSIVEHHFSGTKFGIRTDPADGLLTQGAPGYQLTWMDAKVDDWVVTPRRGKAVEINALWYNALRLLAMWLEEERDRDGFASQVSEAAERARESFNRRFWSDDLGYLYDVVDGEQGDSKHCRPNQIFAISLDYPVLDRSRWDAVLNVVQRRLLTPVGLRSLAPGDPDYKERYYGDLRARDAAYHQGTVWAWLIGPWIDAWLKVHPDDTAGARHFLDGCIAALGDFGLGTIGEVFDAQEPYTARGCIAQAWSVAEVLRGWVKTSTAPRAAIAVEPALAEEAVGVSASD

Samples

Sample ID Description Type Environment
1 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
2 3300004798 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-2 (Metagenome Metatranscriptome) Metatranscriptome Unclassified
3 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
4 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
5 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
6 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
7 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
8 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
9 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
10 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
11 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
12 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
13 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
14 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
15 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
16 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
17 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
18 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
19 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
20 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
21 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
22 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
23 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
24 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
25 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
26 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
27 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
28 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
29 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
30 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
31 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
32 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
33 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
34 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
35 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
36 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
37 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
38 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
39 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
40 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
41 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
42 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
43 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
44 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
45 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
46 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
47 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
48 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
49 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
50 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
51 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
52 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
53 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
54 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
55 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
56 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
57 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
82 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
84 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
85 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
86 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
87 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
88 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
89 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
90 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
91 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
92 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
93 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
94 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
95 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
96 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
97 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
98 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
99 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
100 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
101 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
102 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
103 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
104 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
105 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
106 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
107 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
108 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
109 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
110 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
111 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
112 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
113 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
114 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
115 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
116 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
117 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
118 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
119 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
120 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
121 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
122 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
123 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
124 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
125 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
126 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
127 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
128 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
129 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
130 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
131 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
132 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
133 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
134 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
135 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
136 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
137 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
138 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
139 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
140 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
141 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
142 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
143 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
144 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
145 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
146 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
147 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
148 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
149 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
150 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
151 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
152 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
153 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
154 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
155 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
156 3300059421 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 6_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
157 3300059423 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 8_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
158 3300059424 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 10_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
159 3300059426 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 11_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.51
Metatranscriptomes 0.49
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.98
Nodule 0
Rhizoplane 0
Rhizosphere 98.04
Stem 0
Stem Tuber 0
Unclassified 0.98

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25406J46586_10000654 3300003203 Bacteria 16185
2 Ga0058859_10128282 3300004798 Bacteria 3782
3 Ga0065704_10084709 3300005289 Bacteria 3303
4 Ga0070670_100000526 3300005331 Bacteria 30727
5 Ga0070680_100000415 3300005336 Bacteria 29079
6 Ga0070689_100000234 3300005340 Bacteria 32485
7 Ga0070668_100048163 3300005347 Bacteria 3278
8 Ga0070675_100009559 3300005354 Bacteria 7544
9 Ga0070671_100007863 3300005355 Bacteria 8524
10 Ga0070709_10017215 3300005434 Bacteria 4140
11 Ga0070714_100011659 3300005435 Bacteria 6979
12 Ga0070714_100015356 3300005435 Bacteria 6162
13 Ga0070713_100000657 3300005436 Bacteria 22119
14 Ga0070713_100090451 3300005436 Bacteria 2631
15 Ga0070701_10029785 3300005438 Bacteria 2695
16 Ga0070705_100006648 3300005440 Bacteria 5683
17 Ga0070694_100002328 3300005444 Bacteria 11233
18 Ga0070708_100000021 3300005445 Bacteria 114318
19 Ga0070681_10001210 3300005458 Bacteria 22454
20 Ga0068867_100001198 3300005459 Bacteria 17795
21 Ga0070706_100029421 3300005467 Bacteria 5061
22 Ga0070698_100004126 3300005471 Bacteria 15972
23 Ga0070698_100102027 3300005471 Bacteria 2840
24 Ga0070698_100105760 3300005471 Bacteria 2784
25 Ga0070699_100004011 3300005518 Bacteria 13013
26 Ga0070699_100012958 3300005518 Bacteria 7186
27 Ga0070679_100000429 3300005530 Bacteria 35685
28 Ga0070679_100003851 3300005530 Bacteria 13781
29 Ga0070679_100046560 3300005530 Bacteria 4323
30 Ga0070679_100059928 3300005530 Bacteria 3793
31 Ga0070684_100017343 3300005535 Bacteria 5907
32 Ga0070672_100001625 3300005543 Bacteria 13982
33 Ga0070672_100007428 3300005543 Bacteria 7433
34 Ga0070686_100007033 3300005544 Bacteria 6272
35 Ga0070695_100009546 3300005545 Bacteria 5781
36 Ga0070696_100000496 3300005546 Bacteria 24798
37 Ga0070696_100001284 3300005546 Bacteria 16352
38 Ga0070696_100007861 3300005546 Bacteria 7119
39 Ga0070693_100003475 3300005547 Bacteria 7355
40 Ga0070704_100018470 3300005549 Bacteria 4460
41 Ga0068855_100000294 3300005563 Bacteria 61922
42 Ga0070664_100044354 3300005564 Bacteria 3754
43 Ga0068857_100079407 3300005577 Bacteria 2929
44 Ga0070702_100009847 3300005615 Bacteria 4692
45 Ga0068859_100013709 3300005617 Bacteria 8127
46 Ga0068864_100000022 3300005618 Bacteria 261941
47 Ga0068864_100015797 3300005618 Bacteria 6280
48 Ga0068861_100009610 3300005719 Bacteria 6682
49 Ga0068861_100096141 3300005719 Bacteria 2347
50 Ga0068858_100001034 3300005842 Bacteria 28755
51 Ga0068862_100008581 3300005844 Bacteria 8455
52 Ga0081538_10012499 3300005981 Bacteria 6802
53 Ga0081539_10000122 3300005985 Bacteria 183393
54 Ga0081539_10000716 3300005985 Bacteria 66592
55 Ga0081539_10004492 3300005985 Bacteria 15352
56 Ga0081539_10005616 3300005985 Bacteria 12624
57 Ga0070717_10000902 3300006028 Bacteria 19721
58 Ga0070712_100025906 3300006175 Bacteria 3901
59 Ga0075428_100007705 3300006844 Bacteria 11928
60 Ga0075428_100014076 3300006844 Bacteria 8901
61 Ga0075428_100024146 3300006844 Bacteria 6725
62 Ga0075428_100074855 3300006844 Bacteria 3698
63 Ga0075428_100077499 3300006844 Bacteria 3628
64 Ga0075430_100001722 3300006846 Bacteria 17845
65 Ga0075430_100002003 3300006846 Bacteria 16783
66 Ga0075431_100036570 3300006847 Bacteria 5057
67 Ga0075431_100048697 3300006847 Bacteria 4371
68 Ga0075433_10031167 3300006852 Bacteria 4556
69 Ga0075433_10112223 3300006852 Bacteria 2418
70 Ga0075429_100063530 3300006880 Bacteria 3216
71 Ga0097620_100013711 3300006931 Bacteria 8127
72 Ga0111539_10000407 3300009094 Bacteria 53674
73 Ga0105245_10001733 3300009098 Bacteria 19880
74 Ga0114129_10011075 3300009147 Bacteria 12848
75 Ga0114129_10050711 3300009147 Bacteria 5829
76 Ga0114129_10072279 3300009147 Bacteria 4809
77 Ga0114129_10198325 3300009147 Bacteria 2720
78 Ga0105249_10004628 3300009553 Bacteria 11886
79 Ga0157370_10001119 3300013104 Bacteria 33509
80 Ga0157369_10066314 3300013105 Bacteria 3883
81 Ga0157375_10000019 3300013308 Bacteria 285083
82 Ga0163163_10006257 3300014325 Bacteria 10391
83 Ga0207699_10048211 3300025906 Bacteria 2501
84 Ga0207645_10030364 3300025907 Bacteria 3482
85 Ga0207643_10006314 3300025908 Bacteria 6347
86 Ga0207684_10036205 3300025910 Bacteria 4190
87 Ga0207707_10002002 3300025912 Bacteria 18504
88 Ga0207707_10025406 3300025912 Bacteria 5182
89 Ga0207695_10006096 3300025913 Bacteria 15731
90 Ga0207652_10005112 3300025921 Bacteria 10648
91 Ga0207646_10040164 3300025922 Bacteria 4208
92 Ga0207681_10010250 3300025923 Bacteria 5738
93 Ga0207659_10002247 3300025926 Bacteria 11485
94 Ga0207687_10000934 3300025927 Bacteria 19923
95 Ga0207700_10001140 3300025928 Bacteria 15244
96 Ga0207664_10015261 3300025929 Bacteria 5569
97 Ga0207644_10041787 3300025931 Bacteria 3246
98 Ga0207691_10013441 3300025940 Bacteria 7836
99 Ga0207691_10039772 3300025940 Bacteria 4349
100 Ga0207691_10064121 3300025940 Bacteria 3330
101 Ga0207679_10051302 3300025945 Bacteria 3019
102 Ga0207667_10000787 3300025949 Bacteria 41210
103 Ga0207703_10000081 3300026035 Bacteria 111679
104 Ga0207708_10098485 3300026075 Bacteria 2260
105 Ga0207641_10080710 3300026088 Bacteria 2823
106 Ga0207648_10002101 3300026089 Bacteria 21705
107 Ga0207676_10000029 3300026095 Bacteria 232795
108 Ga0207676_10061765 3300026095 Bacteria 2968
109 Ga0207674_10046325 3300026116 Bacteria 4465
110 Ga0207674_10101744 3300026116 Bacteria 2854
111 Ga0207675_100003427 3300026118 Bacteria 15491
112 Ga0207675_100121058 3300026118 Bacteria 2476
113 Ga0207428_10028021 3300027907 Bacteria 4682
114 Ga0207428_10056850 3300027907 Bacteria 3108
115 Ga0268264_10121517 3300028381 Bacteria 2302
116 Ga0265338_10047718 3300028800 Bacteria 3907
117 Ga0265327_10017820 3300031251 Bacteria 4431
118 Ga0307405_10059172 3300031731 Bacteria 2414
119 Ga0307409_100039153 3300031995 Bacteria 3515
120 Ga0307415_100047813 3300032126 Bacteria 2882
121 Ga0373934_0000333 3300035086 Bacteria 16571
122 Ga0373934_0001587 3300035086 Bacteria 8339
123 Ga0373957_0002847 3300035120 Bacteria 4998
124 Ga0373943_0005490 3300035170 Bacteria 5703
125 Ga0373955_0003068 3300035172 Bacteria 7313
126 Ga0373927_0002829 3300035695 Bacteria 12654
127 Ga0373927_0003180 3300035695 Bacteria 11845
128 Ga0373933_0000232 3300035724 Bacteria 36787
129 Ga0373947_0001590 3300035725 Bacteria 13923
130 Ga0373937_0000129 3300036401 Bacteria 72836
131 Ga0395905_0026687 3300037471 Bacteria 5446
132 Ga0436364_1117176 3300037853 Bacteria 4710
133 Ga0395901_0005190 3300038443 Bacteria 13146
134 Ga0466963_0057959 3300044694 Bacteria 2581
135 Ga0453684_0048808 3300044712 Bacteria 5590
136 Ga0466959_0022383 3300045049 Bacteria 4672
137 Ga0466958_0060220 3300045836 Bacteria 2311
138 Ga0466967_0046893 3300045976 Bacteria 3765
139 Ga0495592_0000345 3300046454 Bacteria 37878
140 Ga0495603_0000958 3300046455 Bacteria 16610
141 Ga0495651_0000111 3300046462 Bacteria 59833
142 Ga0495653_0000078 3300046463 Bacteria 81730
143 Ga0495580_0000036 3300046472 Bacteria 72262
144 Ga0495580_0041247 3300046472 Bacteria 3292
145 Ga0495582_0014340 3300046473 Bacteria 4356
146 Ga0495639_0002565 3300046475 Bacteria 7922
147 Ga0495608_0002769 3300046511 Bacteria 12591
148 Ga0495628_0002146 3300046516 Bacteria 17861
149 Ga0495630_0003668 3300046517 Bacteria 10705
150 Ga0495630_0066464 3300046517 Bacteria 2710
151 Ga0495643_0012703 3300046522 Bacteria 5070
152 Ga0495652_0001496 3300046529 Bacteria 25740
153 Ga0495587_0000199 3300046536 Bacteria 44015
154 Ga0495621_0005976 3300046539 Bacteria 3531
155 Ga0495645_0000325 3300046543 Bacteria 33869
156 Ga0495635_0000047 3300046663 Bacteria 79780
157 Ga0495659_0006672 3300046664 Bacteria 3647
158 Ga0495588_0001373 3300046674 Bacteria 10393
159 Ga0495657_0000116 3300046675 Bacteria 71961
160 Ga0495599_0000422 3300046678 Bacteria 24191
161 Ga0495599_0030129 3300046678 Bacteria 3403
162 Ga0495623_0000049 3300046679 Bacteria 73356
163 Ga0495646_0005011 3300046680 Bacteria 8349
164 Ga0495600_0001911 3300046809 Bacteria 11695
165 Ga0495581_0000396 3300047315 Bacteria 21881
166 Ga0495581_0023030 3300047315 Bacteria 3609
167 Ga0495604_0003196 3300047317 Bacteria 13090
168 Ga0495674_0006130 3300047319 Bacteria 11545
169 Ga0495680_0018337 3300047322 Bacteria 5945
170 Ga0495684_0000109 3300047471 Bacteria 59534
171 Ga0495593_0022508 3300047673 Bacteria 3510
172 Ga0495602_0001124 3300048088 Bacteria 26245
173 Ga0495614_0000051 3300048089 Bacteria 36976
174 Ga0501034_0075959 3300049571 Bacteria 3367
175 Ga0501039_0040210 3300049575 Bacteria 3611
176 Ga0501039_0072288 3300049575 Bacteria 2680
177 Ga0501040_0019528 3300049576 Bacteria 4508
178 Ga0501041_0046581 3300049577 Bacteria 2638
179 Ga0501046_0045861 3300049580 Bacteria 3470
180 Ga0501070_0001143 3300049586 Bacteria 23817
181 Ga0501072_0006156 3300049588 Bacteria 9145
182 Ga0501073_0031024 3300049589 Bacteria 3815
183 Ga0501075_0007936 3300049591 Bacteria 7374
184 Ga0501075_0089197 3300049591 Bacteria 2338
185 Ga0501081_0008082 3300049743 Bacteria 6828
186 Ga0501044_0001754 3300049823 Bacteria 25321
187 nmdc:mga0yw44_38275_c1 3300050492 Bacteria 2837
188 nmdc:mga05p37_42037_c1 3300050507 Bacteria 5614
189 nmdc:mga05p37_49102_c1 3300050507 Bacteria 5190
190 nmdc:mga05p37_5308_c1 3300050507 Bacteria 15127
191 nmdc:mga09592_64358_c1 3300050508 Bacteria 3104
192 nmdc:mga09592_8261_c1 3300050508 Bacteria 8468
193 nmdc:mga0qj67_2894_c1 3300050509 Bacteria 12318
194 nmdc:mga06r32_32893_c1 3300050510 Bacteria 4882
195 nmdc:mga08y16_51550_c1 3300050511 Bacteria 4305
196 nmdc:mga08y16_651_c1 3300050511 Bacteria 32587
197 Ga0495601_0010935 3300053077 Bacteria 5417
198 Ga0495612_0000638 3300053078 Bacteria 14067
199 Ga0495619_0000552 3300053085 Bacteria 24810
200 Ga0500616_0033618 3300053153 Bacteria 2797
201 Ga0590071_001792 3300059421 Bacteria 5549
202 Ga0590074_000200 3300059423 Bacteria 7669
203 Ga0590075_000074 3300059424 Bacteria 25445
204 Ga0590077_000056 3300059426 Bacteria 27300

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300035086 Ga0373934_0001587 Ga0373934_0001587_476_2347 598
2 3300028800 Ga0265338_10047718 Ga0265338_100477182 610
3 3300049575 Ga0501039_0072288 Ga0501039_0072288_96_1958 618
4 3300005546 Ga0070696_100000496 Ga0070696_1000004963 634
5 3300005467 Ga0070706_100029421 Ga0070706_1000294213 635
6 3300025910 Ga0207684_10036205 Ga0207684_100362053 635
7 3300035695 Ga0373927_0002829 Ga0373927_0002829_10670_12643 636
8 3300046674 Ga0495588_0001373 Ga0495588_0001373_14_1987 636
9 3300009147 Ga0114129_10050711 Ga0114129_100507112 638
10 3300049591 Ga0501075_0089197 Ga0501075_0089197_378_2303 638
11 3300006846 Ga0075430_100002003 Ga0075430_1000020039 646
12 3300006880 Ga0075429_100063530 Ga0075429_1000635304 646
13 3300050508 nmdc:mga09592_64358_c1 nmdc:mga09592_64358_c1_912_2999 646
14 3300050509 nmdc:mga0qj67_2894_c1 nmdc:mga0qj67_2894_c1_8715_10802 646
15 3300050508 nmdc:mga09592_8261_c1 nmdc:mga09592_8261_c1_67_2025 649
16 3300050507 nmdc:mga05p37_49102_c1 nmdc:mga05p37_49102_c1_1842_3803 650
17 3300005340 Ga0070689_100000234 Ga0070689_10000023422 654
18 3300005842 Ga0068858_100001034 Ga0068858_1000010345 654
19 3300009098 Ga0105245_10001733 Ga0105245_100017334 654
20 3300025927 Ga0207687_10000934 Ga0207687_100009344 654
21 3300026035 Ga0207703_10000081 Ga0207703_1000008161 654
22 3300053153 Ga0500616_0033618 Ga0500616_0033618_774_2783 655
23 3300031251 Ga0265327_10017820 Ga0265327_100178201 656
24 3300049576 Ga0501040_0019528 Ga0501040_0019528_275_2308 656
25 3300049591 Ga0501075_0007936 Ga0501075_0007936_493_2526 656
26 3300049743 Ga0501081_0008082 Ga0501081_0008082_3326_5359 656
27 3300005471 Ga0070698_100105760 Ga0070698_1001057602 658
28 3300049823 Ga0501044_0001754 Ga0501044_0001754_13651_15648 659
29 3300005435 Ga0070714_100011659 Ga0070714_1000116594 661
30 3300013104 Ga0157370_10001119 Ga0157370_1000111917 661
31 3300045836 Ga0466958_0060220 Ga0466958_0060220_135_2243 661
32 3300032126 Ga0307415_100047813 Ga0307415_1000478132 664
33 3300044712 Ga0453684_0048808 Ga0453684_0048808_94_2127 664
34 3300005471 Ga0070698_100102027 Ga0070698_1001020272 665
35 3300005543 Ga0070672_100001625 Ga0070672_1000016252 667
36 3300005618 Ga0068864_100000022 Ga0068864_100000022102 667
37 3300013308 Ga0157375_10000019 Ga0157375_10000019166 667
38 3300025940 Ga0207691_10013441 Ga0207691_100134412 667
39 3300026095 Ga0207676_10000029 Ga0207676_10000029137 667
40 3300044694 Ga0466963_0057959 Ga0466963_0057959_405_2528 668
41 3300009147 Ga0114129_10072279 Ga0114129_100722793 670
42 3300027907 Ga0207428_10056850 Ga0207428_100568502 670
43 3300006844 Ga0075428_100077499 Ga0075428_1000774992 671
44 3300046539 Ga0495621_0005976 Ga0495621_0005976_1128_3179 673
45 3300049571 Ga0501034_0075959 Ga0501034_0075959_50_2083 673
46 3300005985 Ga0081539_10005616 Ga0081539_100056166 674
47 3300013105 Ga0157369_10066314 Ga0157369_100663142 674
48 3300025912 Ga0207707_10025406 Ga0207707_100254062 674
49 3300005535 Ga0070684_100017343 Ga0070684_1000173434 675
50 3300025913 Ga0207695_10006096 Ga0207695_100060966 675
51 3300005563 Ga0068855_100000294 Ga0068855_1000002946 676
52 3300025949 Ga0207667_10000787 Ga0207667_1000078729 676
53 3300046522 Ga0495643_0012703 Ga0495643_0012703_1919_4012 676
54 3300031995 Ga0307409_100039153 Ga0307409_1000391531 678
55 3300045049 Ga0466959_0022383 Ga0466959_0022383_2175_4250 679
56 3300045976 Ga0466967_0046893 Ga0466967_0046893_256_2331 680
57 3300005436 Ga0070713_100090451 Ga0070713_1000904512 681
58 3300025922 Ga0207646_10040164 Ga0207646_100401642 681
59 3300035086 Ga0373934_0000333 Ga0373934_0000333_14203_16335 681
60 3300035120 Ga0373957_0002847 Ga0373957_0002847_967_3099 681
61 3300035172 Ga0373955_0003068 Ga0373955_0003068_3962_6094 681
62 3300035724 Ga0373933_0000232 Ga0373933_0000232_16909_19041 681
63 3300036401 Ga0373937_0000129 Ga0373937_0000129_53605_55737 681
64 3300046454 Ga0495592_0000345 Ga0495592_0000345_13362_15494 681
65 3300046462 Ga0495651_0000111 Ga0495651_0000111_39920_42052 681
66 3300046463 Ga0495653_0000078 Ga0495653_0000078_14852_16984 681
67 3300046511 Ga0495608_0002769 Ga0495608_0002769_3361_5493 681
68 3300046516 Ga0495628_0002146 Ga0495628_0002146_6547_8679 681
69 3300046529 Ga0495652_0001496 Ga0495652_0001496_8211_10343 681
70 3300046536 Ga0495587_0000199 Ga0495587_0000199_16740_18872 681
71 3300046543 Ga0495645_0000325 Ga0495645_0000325_2950_5082 681
72 3300046663 Ga0495635_0000047 Ga0495635_0000047_72944_75076 681
73 3300046675 Ga0495657_0000116 Ga0495657_0000116_53745_55877 681
74 3300046678 Ga0495599_0000422 Ga0495599_0000422_8738_10870 681
75 3300046679 Ga0495623_0000049 Ga0495623_0000049_55666_57798 681
76 3300046680 Ga0495646_0005011 Ga0495646_0005011_4093_6225 681
77 3300046809 Ga0495600_0001911 Ga0495600_0001911_8494_10626 681
78 3300047315 Ga0495581_0023030 Ga0495581_0023030_730_2862 681
79 3300047317 Ga0495604_0003196 Ga0495604_0003196_969_3101 681
80 3300047319 Ga0495674_0006130 Ga0495674_0006130_5374_7506 681
81 3300047322 Ga0495680_0018337 Ga0495680_0018337_217_2349 681
82 3300047471 Ga0495684_0000109 Ga0495684_0000109_3997_6129 681
83 3300048088 Ga0495602_0001124 Ga0495602_0001124_21404_23536 681
84 3300050492 nmdc:mga0yw44_38275_c1 nmdc:mga0yw44_38275_c1_577_2643 681
85 3300053077 Ga0495601_0010935 Ga0495601_0010935_1603_3735 681
86 3300053078 Ga0495612_0000638 Ga0495612_0000638_6370_8502 681
87 3300053085 Ga0495619_0000552 Ga0495619_0000552_9347_11479 681
88 3300059421 Ga0590071_001792 Ga0590071_001792_2538_4607 681
89 3300059423 Ga0590074_000200 Ga0590074_000200_4667_6736 681
90 3300059424 Ga0590075_000074 Ga0590075_000074_8047_10116 681
91 3300059426 Ga0590077_000056 Ga0590077_000056_2418_4487 681
92 3300005434 Ga0070709_10017215 Ga0070709_100172152 682
93 3300005445 Ga0070708_100000021 Ga0070708_10000002130 682
94 3300005530 Ga0070679_100003851 Ga0070679_1000038515 682
95 3300005530 Ga0070679_100046560 Ga0070679_1000465601 682
96 3300005547 Ga0070693_100003475 Ga0070693_1000034752 682
97 3300025931 Ga0207644_10041787 Ga0207644_100417872 682
98 3300035695 Ga0373927_0003180 Ga0373927_0003180_2574_4655 682
99 3300046517 Ga0495630_0066464 Ga0495630_0066464_16_2097 682
100 3300046678 Ga0495599_0030129 Ga0495599_0030129_1224_3305 682
101 3300005289 Ga0065704_10084709 Ga0065704_100847092 683
102 3300005354 Ga0070675_100009559 Ga0070675_1000095595 683
103 3300005435 Ga0070714_100015356 Ga0070714_1000153562 683
104 3300005436 Ga0070713_100000657 Ga0070713_1000006576 683
105 3300005440 Ga0070705_100006648 Ga0070705_1000066484 683
106 3300005444 Ga0070694_100002328 Ga0070694_1000023282 683
107 3300005459 Ga0068867_100001198 Ga0068867_1000011985 683
108 3300005471 Ga0070698_100004126 Ga0070698_1000041269 683
109 3300005518 Ga0070699_100012958 Ga0070699_1000129584 683
110 3300005545 Ga0070695_100009546 Ga0070695_1000095464 683
111 3300005546 Ga0070696_100001284 Ga0070696_10000128416 683
112 3300005549 Ga0070704_100018470 Ga0070704_1000184702 683
113 3300005577 Ga0068857_100079407 Ga0068857_1000794072 683
114 3300005615 Ga0070702_100009847 Ga0070702_1000098472 683
115 3300005617 Ga0068859_100013709 Ga0068859_1000137092 683
116 3300005719 Ga0068861_100009610 Ga0068861_1000096102 683
117 3300005844 Ga0068862_100008581 Ga0068862_1000085812 683
118 3300006028 Ga0070717_10000902 Ga0070717_1000090214 683
119 3300006175 Ga0070712_100025906 Ga0070712_1000259062 683
120 3300006844 Ga0075428_100007705 Ga0075428_1000077056 683
121 3300006931 Ga0097620_100013711 Ga0097620_1000137116 683
122 3300009147 Ga0114129_10011075 Ga0114129_100110757 683
123 3300009147 Ga0114129_10198325 Ga0114129_101983252 683
124 3300009553 Ga0105249_10004628 Ga0105249_100046282 683
125 3300025907 Ga0207645_10030364 Ga0207645_100303642 683
126 3300025908 Ga0207643_10006314 Ga0207643_100063143 683
127 3300025923 Ga0207681_10010250 Ga0207681_100102504 683
128 3300025926 Ga0207659_10002247 Ga0207659_100022474 683
129 3300025928 Ga0207700_10001140 Ga0207700_100011407 683
130 3300025929 Ga0207664_10015261 Ga0207664_100152612 683
131 3300026075 Ga0207708_10098485 Ga0207708_100984852 683
132 3300026089 Ga0207648_10002101 Ga0207648_1000210120 683
133 3300026116 Ga0207674_10046325 Ga0207674_100463252 683
134 3300026116 Ga0207674_10101744 Ga0207674_101017442 683
135 3300026118 Ga0207675_100003427 Ga0207675_1000034272 683
136 3300028381 Ga0268264_10121517 Ga0268264_101215172 683
137 3300037853 Ga0436364_1117176 Ga0436364_1117176_433_2526 683
138 3300050507 nmdc:mga05p37_42037_c1 nmdc:mga05p37_42037_c1_1729_3780 683
139 3300050507 nmdc:mga05p37_5308_c1 nmdc:mga05p37_5308_c1_5810_7891 683
140 3300005438 Ga0070701_10029785 Ga0070701_100297852 684
141 3300046664 Ga0495659_0006672 Ga0495659_0006672_1174_3258 684
142 3300049577 Ga0501041_0046581 Ga0501041_0046581_38_2101 684
143 3300005355 Ga0070671_100007863 Ga0070671_1000078638 685
144 3300006844 Ga0075428_100024146 Ga0075428_1000241465 685
145 3300006846 Ga0075430_100001722 Ga0075430_1000017224 685
146 3300006847 Ga0075431_100048697 Ga0075431_1000486972 685
147 3300026088 Ga0207641_10080710 Ga0207641_100807102 685
148 3300046472 Ga0495580_0041247 Ga0495580_0041247_698_2821 685
149 3300005518 Ga0070699_100004011 Ga0070699_1000040116 686
150 3300005530 Ga0070679_100059928 Ga0070679_1000599281 686
151 3300005546 Ga0070696_100007861 Ga0070696_1000078613 686
152 3300006852 Ga0075433_10031167 Ga0075433_100311672 686
153 3300025940 Ga0207691_10064121 Ga0207691_100641212 686
154 3300049580 Ga0501046_0045861 Ga0501046_0045861_460_2529 686
155 3300049588 Ga0501072_0006156 Ga0501072_0006156_1830_3899 686
156 3300005336 Ga0070680_100000415 Ga0070680_10000041516 687
157 3300005458 Ga0070681_10001210 Ga0070681_1000121011 687
158 3300005530 Ga0070679_100000429 Ga0070679_1000004299 687
159 3300005985 Ga0081539_10004492 Ga0081539_100044922 687
160 3300006844 Ga0075428_100074855 Ga0075428_1000748552 687
161 3300025912 Ga0207707_10002002 Ga0207707_100020028 687
162 3300025921 Ga0207652_10005112 Ga0207652_100051123 687
163 3300031731 Ga0307405_10059172 Ga0307405_100591721 687
164 3300049589 Ga0501073_0031024 Ga0501073_0031024_914_3028 687
165 3300025906 Ga0207699_10048211 Ga0207699_100482112 688
166 3300035170 Ga0373943_0005490 Ga0373943_0005490_2056_4191 688
167 3300035725 Ga0373947_0001590 Ga0373947_0001590_10990_13125 688
168 3300037471 Ga0395905_0026687 Ga0395905_0026687_3170_5287 688
169 3300038443 Ga0395901_0005190 Ga0395901_0005190_714_2831 688
170 3300046455 Ga0495603_0000958 Ga0495603_0000958_1873_4008 688
171 3300046472 Ga0495580_0000036 Ga0495580_0000036_11264_13399 688
172 3300046473 Ga0495582_0014340 Ga0495582_0014340_2209_4344 688
173 3300046475 Ga0495639_0002565 Ga0495639_0002565_249_2384 688
174 3300046517 Ga0495630_0003668 Ga0495630_0003668_4127_6262 688
175 3300047315 Ga0495581_0000396 Ga0495581_0000396_3297_5432 688
176 3300047673 Ga0495593_0022508 Ga0495593_0022508_399_2534 688
177 3300048089 Ga0495614_0000051 Ga0495614_0000051_33889_36024 688
178 3300049586 Ga0501070_0001143 Ga0501070_0001143_11050_13128 688
179 3300004798 Ga0058859_10128282 Ga0058859_101282822 690
180 3300005981 Ga0081538_10012499 Ga0081538_100124993 690
181 3300009094 Ga0111539_10000407 Ga0111539_1000040721 690
182 3300027907 Ga0207428_10028021 Ga0207428_100280212 690
183 3300049575 Ga0501039_0040210 Ga0501039_0040210_1203_3287 690
184 3300050511 nmdc:mga08y16_651_c1 nmdc:mga08y16_651_c1_11284_13416 690
185 3300005331 Ga0070670_100000526 Ga0070670_10000052610 691
186 3300005347 Ga0070668_100048163 Ga0070668_1000481632 691
187 3300005543 Ga0070672_100007428 Ga0070672_1000074282 691
188 3300005544 Ga0070686_100007033 Ga0070686_1000070331 691
189 3300005564 Ga0070664_100044354 Ga0070664_1000443542 691
190 3300005618 Ga0068864_100015797 Ga0068864_1000157973 691
191 3300005719 Ga0068861_100096141 Ga0068861_1000961411 691
192 3300005985 Ga0081539_10000122 Ga0081539_10000122144 691
193 3300014325 Ga0163163_10006257 Ga0163163_100062577 691
194 3300025940 Ga0207691_10039772 Ga0207691_100397722 691
195 3300025945 Ga0207679_10051302 Ga0207679_100513022 691
196 3300026095 Ga0207676_10061765 Ga0207676_100617652 691
197 3300026118 Ga0207675_100121058 Ga0207675_1001210582 691
198 3300003203 JGI25406J46586_10000654 JGI25406J46586_100006543 692
199 3300005985 Ga0081539_10000716 Ga0081539_1000071620 692
200 3300006844 Ga0075428_100014076 Ga0075428_1000140762 692
201 3300006847 Ga0075431_100036570 Ga0075431_1000365702 692
202 3300006852 Ga0075433_10112223 Ga0075433_101122232 692
203 3300050510 nmdc:mga06r32_32893_c1 nmdc:mga06r32_32893_c1_609_2690 692
204 3300050511 nmdc:mga08y16_51550_c1 nmdc:mga08y16_51550_c1_584_2689 692

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF06202

GDE_C

Amylo-alpha-1,6-glucosidase

303

681

0.94

PF12439

GDE_N

Glycogen debranching enzyme N terminal

28

252

0.93

Structural Annotation

Top 5 Hits

ID Description Score Start End
5z6h-assembly1.cif.gz_A structure of periplasmic trehalase from diamondback moth gut bacteria in the apo form 0.7257 326 677
7e9x-assembly3.cif.gz_C trehalase of arabidopsis thaliana acid mutant -d380a 0.7042 295 681
2jg0-assembly1.cif.gz_A family 37 trehalase from escherichia coli in complex with 1- thiatrehazolin 0.7029 326 683
2jf4-assembly1.cif.gz_A family 37 trehalase from escherichia coli in complex with validoxylamine 0.7026 326 677
2jjb-assembly1.cif.gz_A family 37 trehalase from escherichia coli in complex with casuarine-6- o-alpha-glucopyranose 0.7002 326 683
ID Description Score Start End Superfamily
af_Q54K94_1152_1599_1.50.10.10 Mainly Alpha;Alpha/alpha barrel;Glycosyltransferase; 0.8438 338 675 1.50.10.10
af_P35573_1042_1527_1.50.10.10 Mainly Alpha;Alpha/alpha barrel;Glycosyltransferase; 0.8399 324 675 1.50.10.10
af_O62334_1042_1457_1.50.10.10 Mainly Alpha;Alpha/alpha barrel;Glycosyltransferase; 0.8348 337 675 1.50.10.10
2okxB05 Mainly Alpha;Alpha/alpha barrel;Glycosyltransferase; 0.7661 334 682 1.50.10.10
af_Q9W2H8_1225_1579_1.50.10.10 Mainly Alpha;Alpha/alpha barrel;Glycosyltransferase; 0.7608 370 643 1.50.10.10
ID Description Score Start End GO Terms
AF-A0A7Y4NTS1-F1-model_v4 Glycogen debranching protein 0.9605 25 682 GO:0004134
GO:0004135
GO:0005980
AF-A0A4Q3BWZ8-F1-model_v4 deleted 0.9596 278 683
AF-A0A540X3S6-F1-model_v4 Glycogen debranching protein 0.9586 4 681 GO:0004134
GO:0004135
GO:0005980
AF-A0A2V6L4B6-F1-model_v4 Glycogen debranching protein 0.9584 58 681 GO:0004134
GO:0004135
GO:0005980
AF-A0A3N5ZGB0-F1-model_v4 Glycogen debranching protein 0.9578 511 683 GO:0004134
GO:0004135
GO:0005980

Feature Viewer

pLDDT pTM Quality
88.39 0.91 High
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Predicted Structure (AlphaFold2)

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