F308683

General Info

Members Datasets Scaffolds Average Seq Length
201 166 402 280

Family's Representative Sequence

Representative Sequence 3300031616|Ga0307508_10055196|Ga0307508_100551964
Length 313
Sequence MVPPSSTPRPASRSTAATAAPPSAEIPEQLGFAGMPERLFVCTPSKLGAFADCPRRYRFAYVDRPAPPKGPPWAHNSLGASVHTAMKNWYALPVPRRERSALPTLLKATWVREGYRDVDQERVLYRHALTWLDGYVETLDPQDEPLGVERVVATKTGVIAFNGRADRIDGRAGDAGPEAVIVDYKTGRTGLDTDDARGSQALALYAYAAQKVFRRPCHRVELHHLPTGTVAAHEHTDESLGRQVARAEDTARDIVAAERAVAAGADPDAEFPTRPGPICGWCDFRRSCPAGAELAAKQPWAAVEHWEGTAVAP

Samples

Sample ID Description Type Environment
1 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
2 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
5 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
6 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
7 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
8 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
9 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
10 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
11 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
12 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
13 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
14 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
15 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
16 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
17 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
18 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
19 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
20 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
21 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
22 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
23 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
24 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
25 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
26 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
27 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
28 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
29 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
30 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
31 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
32 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
33 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
34 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
35 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
36 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
37 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
38 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
39 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
40 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
41 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
42 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
43 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
44 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
45 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
46 3300024225 Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU5 Metagenome Rhizosphere
47 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
69 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
71 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
72 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
73 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
74 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
75 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
76 3300031889 Wild Oat associated soil bacterial communities from Lone Jack Road, Encinitas, CA, USA - WO Metagenome Rhizosphere
77 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
78 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
79 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
80 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
81 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
82 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
83 3300035088 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_4 Metagenome Rhizosphere
84 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
85 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
86 3300035115 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_11 Metagenome Rhizosphere
87 3300035121 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_3 Metagenome Rhizosphere
88 3300035207 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 Metagenome Rhizosphere
89 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
90 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
91 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
92 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
93 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
94 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
95 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
96 3300042438 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311FE14Z081617_5533 Metagenome Rhizosphere
97 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
98 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
99 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
100 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
101 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
102 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
103 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
104 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
105 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
106 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
107 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
108 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
109 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
110 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
111 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
112 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
113 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
114 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
115 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
116 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
117 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
118 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
119 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
120 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
121 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
122 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
123 3300053098 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 endosphere Metagenome Endosphere
124 3300053100 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 endosphere Metagenome Endosphere
125 3300053146 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 endosphere Metagenome Endosphere
126 3300053149 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 endosphere Metagenome Endosphere
127 2501939600 Micromonospora sp. L5 Isolate Unclassified
128 2515154088 Salinispora arenicola CNT800 Isolate Rhizosphere
129 2515154129 Salinispora pacifica CNS103 Isolate Rhizosphere
130 2515154137 Salinispora arenicola CNX482 Isolate Rhizosphere
131 2515154202 Salinispora pacifica CNT084 Isolate Rhizosphere
132 2515154203 Salinispora arenicola CNR921 Isolate Rhizosphere
133 2622736626 Micromonospora rhizosphaerae DSM 45431 Isolate Rhizosphere
134 2772190715 Micromonospora chokoriensis NRRL B-24750 Isolate Unclassified
135 2855670206 Micromonospora noduli Lupac 07 Isolate Nodule
136 2855676851 Micromonospora saelicesensis GAR05 Isolate Unclassified
137 2855683550 Micromonospora sp. RP3T Isolate Unclassified
138 2856858025 Micromonospora aurantiaca 110B(2018) Isolate Unclassified
139 2857288857 Micromonospora noduli ONO23 Isolate Unclassified
140 2858848962 Micromonospora saelicesensis GAR06 Isolate Unclassified
141 2858868258 Micromonospora sp. MH33 Isolate Unclassified
142 2858882152 Micromonospora noduli MED15 Isolate Nodule
143 2858888857 Micromonospora saelicesensis Lupac 06 Isolate Unclassified
144 2858895516 Micromonospora saelicesensis PSN13 Isolate Unclassified
145 2858902515 Micromonospora sp. MW-13 Isolate Rhizosphere
146 2867302475 Micromonospora globbae WPS1-2 Isolate Unclassified
147 2867312974 Micromonospora musae NGC1-4 Isolate Unclassified
148 2867319477 Micromonospora musae MS1-9 Isolate Unclassified
149 2869048445 Micromonospora saelicesensis PSN01 Isolate Unclassified
150 2869061728 Micromonospora noduli ONO86 Isolate Unclassified
151 2869068681 Micromonospora noduli GUI43 Isolate Unclassified
152 2880489317 Micromonospora ureilytica DSM 101692 Isolate Unclassified
153 2880495981 Micromonospora vinacea DSM 101695 Isolate Unclassified
154 2887478801 Catellatospora paridis NEAU-CL2 Isolate Rhizosphere
155 2902582711 Micromonospora sp. AP08 Isolate Unclassified
156 2929219909 Micromonospora sp. R-75348 Hybrid assembly Isolate Unclassified
157 2929226422 Micromonospora sp. R-74116 Hybrid assembly Isolate Unclassified
158 2996221748 Micromonospora veneta CAP181 Isolate Unclassified
159 649633069 Micromonospora sp. L5 Isolate Unclassified
160 8003830390 Micromonospora parastrephiae STR1_7 Isolate Rhizosphere
161 8003856774 Micromonospora echinofusca MPMI6 Isolate Unclassified
162 8003870546 Micromonospora tarensis STR1s_6 Isolate Rhizosphere
163 8054704163 Micromonospora trifolii NIE79 Isolate Nodule
164 8054727385 Micromonospora alfalfae MED01 Isolate Nodule
165 8054734606 Micromonospora hortensis NIE111 Isolate Nodule
166 8055412473 Micromonospora phytophila DSM 105363 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 80.1
Metatranscriptomes 0
Isolates 19.9

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.99
Nodule 2.99
Rhizoplane 2.49
Rhizosphere 69.15
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0307508_10055196 3300031616 Bacteria 3520
2 JGI25406J46586_10008590 3300003203 Bacteria 4615
3 Ga0070683_100148404 3300005329 Bacteria 2223
4 Ga0068869_100013609 3300005334 Bacteria 5416
5 Ga0068868_100003896 3300005338 Bacteria 10417
6 Ga0070661_100007180 3300005344 Bacteria 7676
7 Ga0070692_10003267 3300005345 Bacteria 6538
8 Ga0070668_100007864 3300005347 Bacteria 7917
9 Ga0070675_100001366 3300005354 Bacteria 17880
10 Ga0070667_100143888 3300005367 Bacteria 2090
11 Ga0070709_10000147 3300005434 Bacteria 47014
12 Ga0070714_100000226 3300005435 Bacteria 44666
13 Ga0070714_100554343 3300005435 Bacteria 1101
14 Ga0070713_100000184 3300005436 Bacteria 41401
15 Ga0070710_10000031 3300005437 Bacteria 65706
16 Ga0070711_100001039 3300005439 Bacteria 14780
17 Ga0070700_100013476 3300005441 Bacteria 4593
18 Ga0070663_100001779 3300005455 Bacteria 11990
19 Ga0070662_100023510 3300005457 Bacteria 4234
20 Ga0070672_100243187 3300005543 Bacteria 1514
21 Ga0070664_100004367 3300005564 Bacteria 11357
22 Ga0070664_100156950 3300005564 Bacteria 2011
23 Ga0068852_100013769 3300005616 Bacteria 6199
24 Ga0068859_100369257 3300005617 Bacteria 1530
25 Ga0068864_100002172 3300005618 Bacteria 16197
26 Ga0068861_100009253 3300005719 Bacteria 6797
27 Ga0068851_10087021 3300005834 Bacteria 1640
28 Ga0068863_100451601 3300005841 Bacteria 1261
29 Ga0068860_100206020 3300005843 Bacteria 1907
30 Ga0068862_100009199 3300005844 Bacteria 8182
31 Ga0068862_100145387 3300005844 Bacteria 2107
32 Ga0081455_10000544 3300005937 Bacteria 48955
33 Ga0081539_10000094 3300005985 Bacteria 206102
34 Ga0081539_10000906 3300005985 Bacteria 56296
35 Ga0081539_10005623 3300005985 Bacteria 12610
36 Ga0081539_10007881 3300005985 Bacteria 9498
37 Ga0070717_10076071 3300006028 Bacteria 2809
38 Ga0070716_100000061 3300006173 Bacteria 42816
39 Ga0070712_100000710 3300006175 Bacteria 19641
40 Ga0075428_100008649 3300006844 Bacteria 11291
41 Ga0075428_100115232 3300006844 Bacteria 2928
42 Ga0075430_100023963 3300006846 Bacteria 5197
43 Ga0075431_100034131 3300006847 Bacteria 5243
44 Ga0075431_100053014 3300006847 Bacteria 4182
45 Ga0075431_100055143 3300006847 Bacteria 4099
46 Ga0075431_100186662 3300006847 Bacteria 2126
47 Ga0075429_100018608 3300006880 Bacteria 6016
48 Ga0097620_100369274 3300006931 Bacteria 1530
49 Ga0111539_10000482 3300009094 Bacteria 50429
50 Ga0105245_10095409 3300009098 Bacteria 2744
51 Ga0114129_10000114 3300009147 Bacteria 80730
52 Ga0114129_10013349 3300009147 Bacteria 11703
53 Ga0114129_10216470 3300009147 Bacteria 2586
54 Ga0105248_10040034 3300009177 Bacteria 5253
55 Ga0163163_10062025 3300014325 Bacteria 3704
56 Ga0163163_10109798 3300014325 Bacteria 2786
57 Ga0157380_10446001 3300014326 Bacteria 1241
58 Ga0157377_10000812 3300014745 Bacteria 12920
59 Ga0224572_1004818 3300024225 Bacteria 2374
60 Ga0207692_10000134 3300025898 Bacteria 22701
61 Ga0207699_10000431 3300025906 Bacteria 21434
62 Ga0207645_10041371 3300025907 Bacteria 2950
63 Ga0207693_10006672 3300025915 Bacteria 9535
64 Ga0207663_10000766 3300025916 Bacteria 14352
65 Ga0207649_10015664 3300025920 Bacteria 4260
66 Ga0207659_10000900 3300025926 Bacteria 17696
67 Ga0207687_10054277 3300025927 Bacteria 2803
68 Ga0207700_10000133 3300025928 Bacteria 44538
69 Ga0207664_10000524 3300025929 Bacteria 27286
70 Ga0207664_10535071 3300025929 Bacteria 1051
71 Ga0207706_10038048 3300025933 Bacteria 4269
72 Ga0207665_10000473 3300025939 Bacteria 27269
73 Ga0207665_10242297 3300025939 Bacteria 1329
74 Ga0207689_10020986 3300025942 Bacteria 5490
75 Ga0207661_10107440 3300025944 Bacteria 2354
76 Ga0207668_10000472 3300025972 Bacteria 25246
77 Ga0207677_10009280 3300026023 Bacteria 5529
78 Ga0207678_10005647 3300026067 Bacteria 11179
79 Ga0207708_10007183 3300026075 Bacteria 8234
80 Ga0207641_10412839 3300026088 Bacteria 1298
81 Ga0207676_10445486 3300026095 Bacteria 1220
82 Ga0207675_100091117 3300026118 Bacteria 2867
83 Ga0207428_10015413 3300027907 Bacteria 6613
84 Ga0268265_10026883 3300028380 Bacteria 4099
85 Ga0307517_10224080 3300028786 Bacteria 1138
86 Ga0307515_10000119 3300028794 Bacteria 189566
87 Ga0307515_10038546 3300028794 Bacteria 7639
88 Ga0307515_10049828 3300028794 Bacteria 6286
89 Ga0307515_10229038 3300028794 Bacteria 1656
90 Ga0307512_10008306 3300030522 Bacteria 10140
91 Ga0307512_10012302 3300030522 Bacteria 8083
92 Ga0307512_10088918 3300030522 Bacteria 2164
93 Ga0307513_10002141 3300031456 Bacteria 27664
94 Ga0307513_10042247 3300031456 Bacteria 5022
95 Ga0307513_10052344 3300031456 Bacteria 4397
96 Ga0307509_10031099 3300031507 Bacteria 5898
97 Ga0307508_10005290 3300031616 Bacteria 12316
98 Ga0307508_10026042 3300031616 Bacteria 5302
99 Ga0307508_10267928 3300031616 Bacteria 1302
100 Ga0307508_10291884 3300031616 Bacteria 1224
101 Ga0307516_10002896 3300031730 Bacteria 22510
102 Ga0307516_10008614 3300031730 Bacteria 11507
103 Ga0326468_10000327 3300031889 Bacteria 5011
104 Ga0307406_10143848 3300031901 Bacteria 1692
105 Ga0307406_10389435 3300031901 Bacteria 1101
106 Ga0307409_100076314 3300031995 Bacteria 2687
107 Ga0307409_100077168 3300031995 Bacteria 2675
108 Ga0307416_100390417 3300032002 Bacteria 1426
109 Ga0307414_10512088 3300032004 Bacteria 1064
110 Ga0307411_10318338 3300032005 Bacteria 1255
111 Ga0307415_100066480 3300032126 Bacteria 2516
112 Ga0307415_100160917 3300032126 Bacteria 1740
113 Ga0307415_100351618 3300032126 Bacteria 1241
114 Ga0373940_0040392 3300035088 Bacteria 1280
115 Ga0373951_0000090 3300035091 Bacteria 35650
116 Ga0373932_0067539 3300035112 Bacteria 1101
117 Ga0373941_0048376 3300035115 Bacteria 1343
118 Ga0373960_0023206 3300035121 Bacteria 1669
119 Ga0373942_0000760 3300035207 Bacteria 8868
120 Ga0373962_0001301 3300035242 Bacteria 5870
121 Ga0395900_0039870 3300037418 Bacteria 4840
122 Ga0395898_0091309 3300037466 Bacteria 2930
123 Ga0395905_0414003 3300037471 Bacteria 1243
124 Ga0395901_0379833 3300038443 Bacteria 1454
125 Ga0436363_0953388 3300039450 Bacteria 931
126 Ga0451853_0708135 3300041512 Bacteria 3207
127 Ga0439459_0020122 3300042438 Bacteria 1271
128 Ga0466967_0250126 3300045976 Bacteria 1693
129 Ga0495594_0101143 3300046499 Bacteria 1621
130 Ga0495606_0003586 3300046507 Bacteria 16353
131 Ga0495668_0000169 3300046616 Bacteria 97150
132 Ga0495625_0001764 3300046660 Bacteria 25011
133 Ga0495683_0082245 3300047323 Bacteria 1569
134 Ga0495626_0000312 3300048091 Bacteria 51412
135 Ga0496108_0000019 3300048911 Bacteria 234657
136 Ga0496109_0072431 3300048912 Bacteria 3165
137 Ga0496111_0003918 3300048914 Bacteria 9329
138 Ga0496112_0370116 3300048915 Bacteria 1374
139 Ga0496115_0204896 3300048918 Bacteria 1629
140 Ga0501034_0425115 3300049571 Bacteria 1249
141 Ga0501036_0116176 3300049572 Bacteria 2260
142 Ga0501036_0300483 3300049572 Bacteria 1343
143 Ga0501038_0014852 3300049574 Bacteria 7091
144 Ga0501039_0013316 3300049575 Bacteria 6288
145 Ga0501046_0080856 3300049580 Bacteria 2510
146 Ga0501047_0025156 3300049581 Bacteria 5719
147 Ga0501047_0095195 3300049581 Bacteria 2857
148 Ga0501048_0156474 3300049582 Bacteria 1612
149 Ga0501044_0122772 3300049823 Bacteria 2596
150 nmdc:mga09592_150119_c1 3300050508 Bacteria 2010
151 nmdc:mga0qj67_22988_c1 3300050509 Bacteria 4790
152 nmdc:mga06r32_342624_c1 3300050510 Bacteria 1479
153 nmdc:mga06r32_38618_c1 3300050510 Bacteria 4525
154 nmdc:mga06r32_53491_c1 3300050510 Bacteria 3868
155 nmdc:mga08y16_66858_c1 3300050511 Bacteria 3751
156 Ga0500646_0000401 3300053090 Bacteria 12933
157 Ga0500641_0013295 3300053096 Bacteria 3022
158 Ga0500650_0006640 3300053098 Bacteria 4439
159 Ga0500660_082358 3300053100 Bacteria 1468
160 Ga0500588_0000445 3300053146 Bacteria 6512
161 Ga0500600_0047710 3300053149 Bacteria 2441
162 2501941964 2501939600 Bacteria 6907073
163 2515493914 2515154088 Bacteria 5526283
164 2515720627 2515154129 Bacteria 5584369
165 2515755290 2515154137 Bacteria 5711575
166 2516086749 2515154202 Bacteria 5471270
167 2516092336 2515154203 Bacteria 5458536
168 2623586452 2622736626 Bacteria 7181580
169 2772641688 2772190715 Bacteria 6959372
170 2855672243 2855670206 Bacteria 7120389
171 2855678882 2855676851 Bacteria 7063653
172 2855684140 2855683550 Bacteria 7134265
173 2856860367 2856858025 Bacteria 7255264
174 2857295145 2857288857 Bacteria 7189066
175 2858849872 2858848962 Bacteria 6963058
176 2858873086 2858868258 Bacteria 7683772
177 2858888552 2858882152 Bacteria 7230291
178 2858890742 2858888857 Bacteria 7060307
179 2858898570 2858895516 Bacteria 7378898
180 2858905657 2858902515 Bacteria 7086037
181 2867303832 2867302475 Bacteria 7087181
182 2867313330 2867312974 Bacteria 7058875
183 2867325771 2867319477 Bacteria 7069771
184 2869054272 2869048445 Bacteria 6875584
185 2869063468 2869061728 Bacteria 7112407
186 2869070609 2869068681 Bacteria 7205615
187 2880493731 2880489317 Bacteria 7096270
188 2880498593 2880495981 Bacteria 7340502
189 2887483725 2887478801 Bacteria 8972725
190 2902586366 2902582711 Bacteria 6187705
191 2929220583 2929219909 Bacteria 6984360
192 2929227170 2929226422 Bacteria 7248583
193 2996224814 2996221748 Bacteria 6799777
194 649811106 649633069 Bacteria 6962533
195 8003832473 8003830390 Bacteria 6541657
196 8003857185 8003856774 Bacteria 7675274
197 8003876917 8003870546 Bacteria 7396674
198 8054708104 8054704163 Bacteria 7247792
199 8054730973 8054727385 Bacteria 7558670
200 8054735104 8054734606 Bacteria 6947278
201 8055417439 8055412473 Bacteria 6257500
202 Ga0307508_10055196
203 JGI25406J46586_10008590
204 Ga0070683_100148404
205 Ga0068869_100013609
206 Ga0068868_100003896
207 Ga0070661_100007180
208 Ga0070692_10003267
209 Ga0070668_100007864
210 Ga0070675_100001366
211 Ga0070667_100143888
212 Ga0070709_10000147
213 Ga0070714_100000226
214 Ga0070714_100554343
215 Ga0070713_100000184
216 Ga0070710_10000031
217 Ga0070711_100001039
218 Ga0070700_100013476
219 Ga0070663_100001779
220 Ga0070662_100023510
221 Ga0070672_100243187
222 Ga0070664_100004367
223 Ga0070664_100156950
224 Ga0068852_100013769
225 Ga0068859_100369257
226 Ga0068864_100002172
227 Ga0068861_100009253
228 Ga0068851_10087021
229 Ga0068863_100451601
230 Ga0068860_100206020
231 Ga0068862_100009199
232 Ga0068862_100145387
233 Ga0081455_10000544
234 Ga0081539_10000094
235 Ga0081539_10000906
236 Ga0081539_10005623
237 Ga0081539_10007881
238 Ga0070717_10076071
239 Ga0070716_100000061
240 Ga0070712_100000710
241 Ga0075428_100008649
242 Ga0075428_100115232
243 Ga0075430_100023963
244 Ga0075431_100034131
245 Ga0075431_100053014
246 Ga0075431_100055143
247 Ga0075431_100186662
248 Ga0075429_100018608
249 Ga0097620_100369274
250 Ga0111539_10000482
251 Ga0105245_10095409
252 Ga0114129_10000114
253 Ga0114129_10013349
254 Ga0114129_10216470
255 Ga0105248_10040034
256 Ga0163163_10062025
257 Ga0163163_10109798
258 Ga0157380_10446001
259 Ga0157377_10000812
260 Ga0224572_1004818
261 Ga0207692_10000134
262 Ga0207699_10000431
263 Ga0207645_10041371
264 Ga0207693_10006672
265 Ga0207663_10000766
266 Ga0207649_10015664
267 Ga0207659_10000900
268 Ga0207687_10054277
269 Ga0207700_10000133
270 Ga0207664_10000524
271 Ga0207664_10535071
272 Ga0207706_10038048
273 Ga0207665_10000473
274 Ga0207665_10242297
275 Ga0207689_10020986
276 Ga0207661_10107440
277 Ga0207668_10000472
278 Ga0207677_10009280
279 Ga0207678_10005647
280 Ga0207708_10007183
281 Ga0207641_10412839
282 Ga0207676_10445486
283 Ga0207675_100091117
284 Ga0207428_10015413
285 Ga0268265_10026883
286 Ga0307517_10224080
287 Ga0307515_10000119
288 Ga0307515_10038546
289 Ga0307515_10049828
290 Ga0307515_10229038
291 Ga0307512_10008306
292 Ga0307512_10012302
293 Ga0307512_10088918
294 Ga0307513_10002141
295 Ga0307513_10042247
296 Ga0307513_10052344
297 Ga0307509_10031099
298 Ga0307508_10005290
299 Ga0307508_10026042
300 Ga0307508_10267928
301 Ga0307508_10291884
302 Ga0307516_10002896
303 Ga0307516_10008614
304 Ga0326468_10000327
305 Ga0307406_10143848
306 Ga0307406_10389435
307 Ga0307409_100076314
308 Ga0307409_100077168
309 Ga0307416_100390417
310 Ga0307414_10512088
311 Ga0307411_10318338
312 Ga0307415_100066480
313 Ga0307415_100160917
314 Ga0307415_100351618
315 Ga0373940_0040392
316 Ga0373951_0000090
317 Ga0373932_0067539
318 Ga0373941_0048376
319 Ga0373960_0023206
320 Ga0373942_0000760
321 Ga0373962_0001301
322 Ga0395900_0039870
323 Ga0395898_0091309
324 Ga0395905_0414003
325 Ga0395901_0379833
326 Ga0436363_0953388
327 Ga0451853_0708135
328 Ga0439459_0020122
329 Ga0466967_0250126
330 Ga0495594_0101143
331 Ga0495606_0003586
332 Ga0495668_0000169
333 Ga0495625_0001764
334 Ga0495683_0082245
335 Ga0495626_0000312
336 Ga0496108_0000019
337 Ga0496109_0072431
338 Ga0496111_0003918
339 Ga0496112_0370116
340 Ga0496115_0204896
341 Ga0501034_0425115
342 Ga0501036_0116176
343 Ga0501036_0300483
344 Ga0501038_0014852
345 Ga0501039_0013316
346 Ga0501046_0080856
347 Ga0501047_0025156
348 Ga0501047_0095195
349 Ga0501048_0156474
350 Ga0501044_0122772
351 nmdc:mga09592_150119_c1
352 nmdc:mga0qj67_22988_c1
353 nmdc:mga06r32_342624_c1
354 nmdc:mga06r32_38618_c1
355 nmdc:mga06r32_53491_c1
356 nmdc:mga08y16_66858_c1
357 Ga0500646_0000401
358 Ga0500641_0013295
359 Ga0500650_0006640
360 Ga0500660_082358
361 Ga0500588_0000445
362 Ga0500600_0047710
363 2501941964
364 2515493914
365 2515720627
366 2515755290
367 2516086749
368 2516092336
369 2623586452
370 2772641688
371 2855672243
372 2855678882
373 2855684140
374 2856860367
375 2857295145
376 2858849872
377 2858873086
378 2858888552
379 2858890742
380 2858898570
381 2858905657
382 2867303832
383 2867313330
384 2867325771
385 2869054272
386 2869063468
387 2869070609
388 2880493731
389 2880498593
390 2887483725
391 2902586366
392 2929220583
393 2929227170
394 2996224814
395 649811106
396 8003832473
397 8003857185
398 8003876917
399 8054708104
400 8054730973
401 8054735104
402 8055417439

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF12705

PDDEXK_1

PD-(D/E)XK nuclease superfamily

41

289

0.77

Structural Annotation

Top 5 Hits

ID Description Score Start End
6ppu-assembly1.cif.gz_A error: ('connection aborted.', connectionreseterror(104, 'connection reset by peer')) 0.8087 27 279
7sjr-assembly1.cif.gz_A cryo-em structure of adna-adnb(w325a) in complex with dna and amppnp 0.7799 26 279
6ppr-assembly1.cif.gz_A cryo-em structure of adna(d934a)-adnb(d1014a) in complex with amppnp and dna 0.7498 24 279
6ppj-assembly1.cif.gz_A cryo-em structure of adna(d934a)-adnb(d1014a) in complex with amppnp 0.7445 26 279
5zyt-assembly4.cif.gz_D crystal structure of human mgme1 with 3' overhang double strand dna3 0.6505 124 245
ID Description Score Start End Superfamily
af_O33254_93_261_2.50.20.10 Mainly Beta;Clam;outer membrane lipoprotein receptor (LolB), chain A;Lipoprotein localisation LolA/LolB/LppX 0.7725 106 278 2.50.20.10
af_O33254_93_261_2.50.20.10 Mainly Beta;Clam;outer membrane lipoprotein receptor (LolB), chain A;Lipoprotein localisation LolA/LolB/LppX 0.7605 106 278 2.50.20.10
af_F1Q892_443_722_3.90.320.10 Alpha Beta;Alpha-Beta Complex;Lambda Exonuclease; Chain A; 0.6726 32 277 3.90.320.10
af_Q57822_2_169_3.90.320.10 Alpha Beta;Alpha-Beta Complex;Lambda Exonuclease; Chain A; 0.6663 135 277 3.90.320.10
af_Q58060_12_207_3.50.30.40 Alpha Beta;3-Layer(bba) Sandwich;Glucose Oxidase; domain 1;Ribonuclease E inhibitor RraA/RraA-like 0.66 217 258 3.50.30.40
ID Description Score Start End GO Terms
AF-A0A5D0V165-F1-model_v4 PD-(D/E)XK nuclease family protein 0.9746 24 302
AF-A0A7V9ILY7-F1-model_v4 PD-(D/E)XK nuclease family protein 0.9734 24 292
AF-A0A7J9Y6V6-F1-model_v4 DUF2800 domain-containing protein 0.9703 98 292
AF-A0A7L4YU83-F1-model_v4 Recombinase RecB 0.9664 24 292
AF-A0A5D0V165-F1-model_v4 PD-(D/E)XK nuclease family protein 0.9643 24 302

Map