F307851

General Info

Members Datasets Scaffolds Average Seq Length
200 147 400 321

Family's Representative Sequence

Representative Sequence 3300053153|Ga0500616_0003395|Ga0500616_0003395_11185_12207
Length 340
Sequence MTGIRPVFDVPQATEQILAGSRTWIARAITLVESSRPDHRRQAQELLVELGRRGPDVAAVTRVGVTGVPGAGKSTFIDALGGRLIDAGHSVAVLAVDPSSSRSGGSILGDKTRMARLAADPKAFVRPSPTAGTLGGVARATREAMMVLEAAGYDVVIVETVGVGQSEITVAEMVDTFLLLTLARAGDQLQGIKKGVLELADVIAVNKADGAHEAEAWRAARELSGALHLIEPDAEAATAGWSTPVLTCSARFGTGLDEVWQQVRRHRETLDAAGLLAARRQRQLIGWTWAMVRDGLLARLRESQAVRDLAPGLEQQVLAGALTPALAAERILSALSAHPD

Samples

Sample ID Description Type Environment
1 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
2 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
5 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
6 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
7 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
8 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
9 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
10 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
11 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
12 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
13 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
14 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
15 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
16 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
17 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
18 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
19 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
20 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
21 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
22 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
23 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
24 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
25 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
26 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
27 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
28 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
29 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
30 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
31 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
32 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
33 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
34 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
35 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
36 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
37 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
38 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
39 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
40 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
41 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
42 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
43 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
44 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
45 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
46 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
47 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
48 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
49 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
73 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
77 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
78 3300030745 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 8 Metagenome Rhizosphere
79 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
80 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
81 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
82 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
83 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
84 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
85 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
86 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
87 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
88 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
89 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
90 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
91 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
92 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
93 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
94 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
95 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
96 3300041491 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_1 MetaG Metagenome Unclassified
97 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
98 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
99 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
100 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
101 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
102 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
103 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
104 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
105 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
106 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
107 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
108 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
109 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
110 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
111 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
112 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
113 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
114 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
115 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
116 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
117 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
118 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
119 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
120 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
121 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
122 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
123 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
124 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
125 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
126 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
127 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
128 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
129 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
130 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
131 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
132 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
133 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
134 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
135 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
136 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
137 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
138 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
139 2582580736 Prauserella sp. Am3 Isolate Unclassified
140 2643221961 Aeromicrobium sp. Root236 Isolate Unclassified
141 2643221962 Aeromicrobium sp. Root344 Isolate Unclassified
142 2751185734 Saccharothrix sp. NRRL B-16314 Isolate Rhizosphere
143 2791354901 Actinophytocola xanthii 11-183 Isolate Rhizosphere
144 2855386786 Nocardioides ferulae EGI 63112 Isolate Unclassified
145 2866612099 Amycolatopsis suaedae 8-3EHSu Isolate Unclassified
146 2870721527 Saccharothrix ecbatanensis DSM 45486 Isolate Rhizosphere
147 8047710418 Umezawaea endophytica DSM 103496 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 95.5
Metatranscriptomes 0
Isolates 4.5

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 7
Nodule 0
Rhizoplane 11
Rhizosphere 71
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0500616_0003395 3300053153 Bacteria 12219
2 JGI25406J46586_10000799 3300003203 Bacteria 14857
3 Ga0070683_100099546 3300005329 Bacteria 2736
4 Ga0070683_100161280 3300005329 Bacteria 2127
5 Ga0070670_100159821 3300005331 Bacteria 1952
6 Ga0070670_100511029 3300005331 Bacteria 1069
7 Ga0070682_100128179 3300005337 Bacteria 1714
8 Ga0070669_100002566 3300005353 Bacteria 13142
9 Ga0070671_100003588 3300005355 Bacteria 12130
10 Ga0070667_100000082 3300005367 Bacteria 118320
11 Ga0070667_100112068 3300005367 Bacteria 2366
12 Ga0070713_100086286 3300005436 Bacteria 2691
13 Ga0070711_100322983 3300005439 Bacteria 1234
14 Ga0070700_100000039 3300005441 Bacteria 108248
15 Ga0070663_100004363 3300005455 Bacteria 8299
16 Ga0070663_100102557 3300005455 Bacteria 2137
17 Ga0070679_100363250 3300005530 Bacteria 1395
18 Ga0068853_100281414 3300005539 Bacteria 1533
19 Ga0070686_100203247 3300005544 Bacteria 1421
20 Ga0070693_100159680 3300005547 Bacteria 1435
21 Ga0070665_100003904 3300005548 Bacteria 15759
22 Ga0070665_100127352 3300005548 Bacteria 2549
23 Ga0070665_100305276 3300005548 Bacteria 1595
24 Ga0068852_100012524 3300005616 Bacteria 6443
25 Ga0068852_100125107 3300005616 Bacteria 2360
26 Ga0068852_100370610 3300005616 Bacteria 1403
27 Ga0068859_100016827 3300005617 Bacteria 7340
28 Ga0068863_100001226 3300005841 Bacteria 25572
29 Ga0068863_100007729 3300005841 Bacteria 10513
30 Ga0068863_100439995 3300005841 Bacteria 1278
31 Ga0068858_100008035 3300005842 Bacteria 10158
32 Ga0068860_100000011 3300005843 Bacteria 328172
33 Ga0068862_100000012 3300005844 Bacteria 267598
34 Ga0081539_10000915 3300005985 Bacteria 55784
35 Ga0081539_10020900 3300005985 Bacteria 4398
36 Ga0075363_100003810 3300006048 Bacteria 6499
37 Ga0075363_100007204 3300006048 Bacteria 5098
38 Ga0075364_10053652 3300006051 Bacteria 2635
39 Ga0075362_10055807 3300006177 Bacteria 1777
40 Ga0075369_10007962 3300006186 Bacteria 4060
41 Ga0075369_10013007 3300006186 Bacteria 3294
42 Ga0075370_10034852 3300006353 Bacteria 2823
43 Ga0097620_100016828 3300006931 Bacteria 7340
44 Ga0111539_10077980 3300009094 Bacteria 3898
45 Ga0105245_10032813 3300009098 Bacteria 4598
46 Ga0105245_10118363 3300009098 Bacteria 2472
47 Ga0105245_10220954 3300009098 Bacteria 1828
48 Ga0105247_10000007 3300009101 Bacteria 409490
49 Ga0105241_10323767 3300009174 Bacteria 1330
50 Ga0105248_10000114 3300009177 Bacteria 90862
51 Ga0105237_10166071 3300009545 Bacteria 2206
52 Ga0105238_10021017 3300009551 Bacteria 6649
53 Ga0105249_10000001 3300009553 Bacteria 504948
54 Ga0105249_10008166 3300009553 Bacteria 9122
55 Ga0105239_10371918 3300010375 Bacteria 1615
56 Ga0157374_10589830 3300013296 Bacteria 1121
57 Ga0157378_10267829 3300013297 Bacteria 1642
58 Ga0163162_10162498 3300013306 Bacteria 2355
59 Ga0163162_10415304 3300013306 Bacteria 1478
60 Ga0157372_10252396 3300013307 Bacteria 2048
61 Ga0163163_10016938 3300014325 Bacteria 6784
62 Ga0163163_10074030 3300014325 Bacteria 3397
63 Ga0182008_10135707 3300014497 Bacteria 1229
64 Ga0157377_10111553 3300014745 Bacteria 1644
65 Ga0157379_10019946 3300014968 Bacteria 5923
66 Ga0209051_1063262 3300025303 Bacteria 1153
67 Ga0207710_10000013 3300025900 Bacteria 409402
68 Ga0207688_10016693 3300025901 Bacteria 3985
69 Ga0207647_10056538 3300025904 Bacteria 2407
70 Ga0207643_10064425 3300025908 Bacteria 2097
71 Ga0207662_10016234 3300025918 Bacteria 4199
72 Ga0207662_10208134 3300025918 Bacteria 1269
73 Ga0207657_10051489 3300025919 Bacteria 3579
74 Ga0207681_10007174 3300025923 Bacteria 6837
75 Ga0207694_10017158 3300025924 Bacteria 5469
76 Ga0207687_10008605 3300025927 Bacteria 6674
77 Ga0207687_10135965 3300025927 Bacteria 1859
78 Ga0207700_10183693 3300025928 Bacteria 1753
79 Ga0207700_10231095 3300025928 Bacteria 1573
80 Ga0207700_10282576 3300025928 Bacteria 1428
81 Ga0207644_10061035 3300025931 Bacteria 2729
82 Ga0207644_10356983 3300025931 Bacteria 1188
83 Ga0207690_10240967 3300025932 Bacteria 1393
84 Ga0207669_10272138 3300025937 Bacteria 1273
85 Ga0207665_10194474 3300025939 Bacteria 1475
86 Ga0207711_10000327 3300025941 Bacteria 50683
87 Ga0207667_10331033 3300025949 Bacteria 1555
88 Ga0207712_10000006 3300025961 Bacteria 573204
89 Ga0207658_10000140 3300025986 Bacteria 76436
90 Ga0207658_10024038 3300025986 Bacteria 4258
91 Ga0207658_10405190 3300025986 Bacteria 1199
92 Ga0207678_10107534 3300026067 Bacteria 2379
93 Ga0207708_10000044 3300026075 Bacteria 120765
94 Ga0207641_10001500 3300026088 Bacteria 22841
95 Ga0207641_10116051 3300026088 Bacteria 2381
96 Ga0207641_10360749 3300026088 Bacteria 1387
97 Ga0207683_10049786 3300026121 Bacteria 3669
98 Ga0207698_10021102 3300026142 Bacteria 4498
99 Ga0207698_10159008 3300026142 Bacteria 1973
100 Ga0207428_10093498 3300027907 Bacteria 2332
101 Ga0268266_10056696 3300028379 Bacteria 3370
102 Ga0268265_10000016 3300028380 Bacteria 299380
103 Ga0268264_10000026 3300028381 Bacteria 459088
104 Ga0307515_10140713 3300028794 Bacteria 2590
105 Ga0307512_10023502 3300030522 Bacteria 5506
106 Ga0316182_1046695 3300030745 Bacteria 2931
107 Ga0265327_10013467 3300031251 Bacteria 5431
108 Ga0307513_10001046 3300031456 Bacteria 40182
109 Ga0316578_10005035 3300031728 Bacteria 6344
110 Ga0307413_10001396 3300031824 Bacteria 9107
111 Ga0307406_10353866 3300031901 Bacteria 1149
112 Ga0307407_10267945 3300031903 Bacteria 1178
113 Ga0307409_100343677 3300031995 Bacteria 1405
114 Ga0307411_10002558 3300032005 Bacteria 8115
115 Ga0307415_100061314 3300032126 Bacteria 2604
116 Ga0316583_10003738 3300032133 Bacteria 5385
117 Ga0316585_10009604 3300032137 Bacteria 2828
118 Ga0307507_10072727 3300033179 Bacteria 3095
119 Ga0316574_0071833 3300035398 Bacteria 2186
120 Ga0316582_0110320 3300036647 Bacteria 1830
121 Ga0395899_0016825 3300037312 Bacteria 5576
122 Ga0436364_0014417 3300037853 Bacteria 52893
123 Ga0436364_0176561 3300037853 Bacteria 5193
124 Ga0395901_0152592 3300038443 Bacteria 2427
125 Ga0395901_0639795 3300038443 Bacteria 1068
126 Ga0451833_0980057 3300041491 Bacteria 12474
127 Ga0466969_0053748 3300044656 Bacteria 1974
128 Ga0466969_0106934 3300044656 Bacteria 1312
129 Ga0466966_0002853 3300044684 Bacteria 11378
130 Ga0466966_0046206 3300044684 Bacteria 2780
131 Ga0466961_0005777 3300044693 Bacteria 7831
132 Ga0466961_0012526 3300044693 Bacteria 5427
133 Ga0466961_0134228 3300044693 Bacteria 1551
134 Ga0466961_0145360 3300044693 Bacteria 1483
135 Ga0466963_0013400 3300044694 Bacteria 5034
136 Ga0466963_0433735 3300044694 Bacteria 927
137 Ga0466968_0040124 3300044735 Bacteria 1973
138 Ga0466970_0075468 3300044765 Bacteria 1816
139 Ga0466957_0018494 3300044842 Bacteria 4093
140 Ga0466960_0122918 3300044901 Bacteria 1361
141 Ga0466959_0017783 3300045049 Bacteria 5213
142 Ga0466959_0161676 3300045049 Bacteria 1574
143 Ga0466958_0147485 3300045836 Bacteria 1483
144 Ga0466967_0007557 3300045976 Bacteria 7852
145 Ga0466967_0141649 3300045976 Bacteria 2240
146 Ga0466967_0438674 3300045976 Bacteria 1275
147 Ga0495603_0078860 3300046455 Bacteria 1931
148 Ga0495624_0034031 3300046690 Bacteria 3299
149 Ga0496101_0006433 3300048904 Bacteria 7558
150 Ga0496102_0000124 3300048905 Bacteria 110030
151 Ga0496102_0014793 3300048905 Bacteria 6785
152 Ga0496102_0336181 3300048905 Bacteria 1422
153 Ga0496103_0001690 3300048906 Bacteria 14432
154 Ga0496103_0041980 3300048906 Bacteria 2813
155 Ga0496104_0113914 3300048907 Bacteria 2593
156 Ga0496104_0163742 3300048907 Bacteria 2133
157 Ga0496105_0130358 3300048908 Bacteria 2073
158 Ga0496108_0019014 3300048911 Bacteria 5635
159 Ga0496108_0086094 3300048911 Bacteria 2668
160 Ga0496109_0001085 3300048912 Bacteria 22611
161 Ga0496109_0063475 3300048912 Bacteria 3379
162 Ga0496110_0055970 3300048913 Bacteria 3471
163 Ga0496112_0003265 3300048915 Bacteria 13385
164 Ga0496112_0015122 3300048915 Bacteria 7190
165 Ga0496112_0029739 3300048915 Bacteria 5285
166 Ga0496112_0250783 3300048915 Bacteria 1721
167 Ga0496113_0179526 3300048916 Bacteria 1678
168 Ga0496113_0207911 3300048916 Bacteria 1557
169 Ga0496114_0000330 3300048917 Bacteria 34389
170 Ga0496114_0045888 3300048917 Bacteria 3631
171 Ga0496117_0000401 3300048920 Bacteria 73619
172 Ga0496118_0002281 3300048921 Bacteria 26176
173 Ga0496119_0049322 3300048922 Bacteria 2603
174 Ga0496120_0077797 3300048923 Bacteria 1805
175 Ga0496121_0131865 3300048924 Bacteria 1868
176 Ga0496124_0096481 3300048927 Bacteria 2401
177 Ga0496125_0013195 3300048928 Bacteria 8140
178 Ga0496126_0024211 3300048929 Bacteria 5864
179 Ga0496126_0032361 3300048929 Bacteria 4927
180 Ga0501033_0005999 3300049570 Bacteria 9532
181 Ga0501047_0000088 3300049581 Bacteria 117495
182 Ga0501047_0306229 3300049581 Bacteria 1430
183 Ga0501044_0004373 3300049823 Bacteria 15815
184 nmdc:mga03n38_4279_c1 3300050490 Bacteria 4703
185 nmdc:mga0yw44_165350_c1 3300050492 Bacteria 1450
186 nmdc:mga07m45_37918_c1 3300050496 Bacteria 2688
187 nmdc:mga08y16_88250_c1 3300050511 Bacteria 3232
188 Ga0500559_0078078 3300053136 Bacteria 1501
189 Ga0500645_000576 3300053730 Bacteria 23758
190 Ga0466962_0019528 3300061719 Bacteria 3258
191 Ga0466962_0075826 3300061719 Bacteria 1607
192 2583152406 2582580736 Bacteria 5325865
193 2645722441 2643221961 Bacteria 3919167
194 2645725414 2643221962 Bacteria 3874254
195 2753074281 2751185734 Bacteria 8863695
196 2791915892 2791354901 Bacteria 8322202
197 2855390774 2855386786 Bacteria 4752232
198 2866618856 2866612099 Bacteria 7543886
199 2870727334 2870721527 Bacteria 9689237
200 8047719823 8047710418 Bacteria 11023148
201 Ga0500616_0003395
202 JGI25406J46586_10000799
203 Ga0070683_100099546
204 Ga0070683_100161280
205 Ga0070670_100159821
206 Ga0070670_100511029
207 Ga0070682_100128179
208 Ga0070669_100002566
209 Ga0070671_100003588
210 Ga0070667_100000082
211 Ga0070667_100112068
212 Ga0070713_100086286
213 Ga0070711_100322983
214 Ga0070700_100000039
215 Ga0070663_100004363
216 Ga0070663_100102557
217 Ga0070679_100363250
218 Ga0068853_100281414
219 Ga0070686_100203247
220 Ga0070693_100159680
221 Ga0070665_100003904
222 Ga0070665_100127352
223 Ga0070665_100305276
224 Ga0068852_100012524
225 Ga0068852_100125107
226 Ga0068852_100370610
227 Ga0068859_100016827
228 Ga0068863_100001226
229 Ga0068863_100007729
230 Ga0068863_100439995
231 Ga0068858_100008035
232 Ga0068860_100000011
233 Ga0068862_100000012
234 Ga0081539_10000915
235 Ga0081539_10020900
236 Ga0075363_100003810
237 Ga0075363_100007204
238 Ga0075364_10053652
239 Ga0075362_10055807
240 Ga0075369_10007962
241 Ga0075369_10013007
242 Ga0075370_10034852
243 Ga0097620_100016828
244 Ga0111539_10077980
245 Ga0105245_10032813
246 Ga0105245_10118363
247 Ga0105245_10220954
248 Ga0105247_10000007
249 Ga0105241_10323767
250 Ga0105248_10000114
251 Ga0105237_10166071
252 Ga0105238_10021017
253 Ga0105249_10000001
254 Ga0105249_10008166
255 Ga0105239_10371918
256 Ga0157374_10589830
257 Ga0157378_10267829
258 Ga0163162_10162498
259 Ga0163162_10415304
260 Ga0157372_10252396
261 Ga0163163_10016938
262 Ga0163163_10074030
263 Ga0182008_10135707
264 Ga0157377_10111553
265 Ga0157379_10019946
266 Ga0209051_1063262
267 Ga0207710_10000013
268 Ga0207688_10016693
269 Ga0207647_10056538
270 Ga0207643_10064425
271 Ga0207662_10016234
272 Ga0207662_10208134
273 Ga0207657_10051489
274 Ga0207681_10007174
275 Ga0207694_10017158
276 Ga0207687_10008605
277 Ga0207687_10135965
278 Ga0207700_10183693
279 Ga0207700_10231095
280 Ga0207700_10282576
281 Ga0207644_10061035
282 Ga0207644_10356983
283 Ga0207690_10240967
284 Ga0207669_10272138
285 Ga0207665_10194474
286 Ga0207711_10000327
287 Ga0207667_10331033
288 Ga0207712_10000006
289 Ga0207658_10000140
290 Ga0207658_10024038
291 Ga0207658_10405190
292 Ga0207678_10107534
293 Ga0207708_10000044
294 Ga0207641_10001500
295 Ga0207641_10116051
296 Ga0207641_10360749
297 Ga0207683_10049786
298 Ga0207698_10021102
299 Ga0207698_10159008
300 Ga0207428_10093498
301 Ga0268266_10056696
302 Ga0268265_10000016
303 Ga0268264_10000026
304 Ga0307515_10140713
305 Ga0307512_10023502
306 Ga0316182_1046695
307 Ga0265327_10013467
308 Ga0307513_10001046
309 Ga0316578_10005035
310 Ga0307413_10001396
311 Ga0307406_10353866
312 Ga0307407_10267945
313 Ga0307409_100343677
314 Ga0307411_10002558
315 Ga0307415_100061314
316 Ga0316583_10003738
317 Ga0316585_10009604
318 Ga0307507_10072727
319 Ga0316574_0071833
320 Ga0316582_0110320
321 Ga0395899_0016825
322 Ga0436364_0014417
323 Ga0436364_0176561
324 Ga0395901_0152592
325 Ga0395901_0639795
326 Ga0451833_0980057
327 Ga0466969_0053748
328 Ga0466969_0106934
329 Ga0466966_0002853
330 Ga0466966_0046206
331 Ga0466961_0005777
332 Ga0466961_0012526
333 Ga0466961_0134228
334 Ga0466961_0145360
335 Ga0466963_0013400
336 Ga0466963_0433735
337 Ga0466968_0040124
338 Ga0466970_0075468
339 Ga0466957_0018494
340 Ga0466960_0122918
341 Ga0466959_0017783
342 Ga0466959_0161676
343 Ga0466958_0147485
344 Ga0466967_0007557
345 Ga0466967_0141649
346 Ga0466967_0438674
347 Ga0495603_0078860
348 Ga0495624_0034031
349 Ga0496101_0006433
350 Ga0496102_0000124
351 Ga0496102_0014793
352 Ga0496102_0336181
353 Ga0496103_0001690
354 Ga0496103_0041980
355 Ga0496104_0113914
356 Ga0496104_0163742
357 Ga0496105_0130358
358 Ga0496108_0019014
359 Ga0496108_0086094
360 Ga0496109_0001085
361 Ga0496109_0063475
362 Ga0496110_0055970
363 Ga0496112_0003265
364 Ga0496112_0015122
365 Ga0496112_0029739
366 Ga0496112_0250783
367 Ga0496113_0179526
368 Ga0496113_0207911
369 Ga0496114_0000330
370 Ga0496114_0045888
371 Ga0496117_0000401
372 Ga0496118_0002281
373 Ga0496119_0049322
374 Ga0496120_0077797
375 Ga0496121_0131865
376 Ga0496124_0096481
377 Ga0496125_0013195
378 Ga0496126_0024211
379 Ga0496126_0032361
380 Ga0501033_0005999
381 Ga0501047_0000088
382 Ga0501047_0306229
383 Ga0501044_0004373
384 nmdc:mga03n38_4279_c1
385 nmdc:mga0yw44_165350_c1
386 nmdc:mga07m45_37918_c1
387 nmdc:mga08y16_88250_c1
388 Ga0500559_0078078
389 Ga0500645_000576
390 Ga0466962_0019528
391 Ga0466962_0075826
392 2583152406
393 2645722441
394 2645725414
395 2753074281
396 2791915892
397 2855390774
398 2866618856
399 2870727334
400 8047719823

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03308

MeaB

Methylmalonyl Co-A mutase-associated GTPase MeaB

25

305

0.96

PF02492

cobW

CobW/HypB/UreG, nucleotide-binding domain

61

235

0.72

Structural Annotation

Top 5 Hits

ID Description Score Start End
3p32-assembly1.cif.gz_A-2 hydrolysis of gtp to gdp by an mcm-associated and meab- and mmaa-like g-protein from mycobacterium tuberculosis 0.9185 6 320
3md0-assembly1.cif.gz_A-2 crystal structure of arginine/ornithine transport system atpase from mycobacterium tuberculosis bound to gdp (a ras-like gtpase superfamily protein) 0.9174 6 320
4gt1-assembly1.cif.gz_A-2 crystal structure of a meab- and mmaa-like gtpase from mycobacterium tuberculosis bound to 2'-deoxyguanosine diphosphate 0.9162 6 320
2qm7-assembly1.cif.gz_B meab, a bacterial homolog of mmaa, bound to gdp 0.9152 5 320
2qm7-assembly1.cif.gz_B meab, a bacterial homolog of mmaa, bound to gdp 0.9095 5 320
ID Description Score Start End Superfamily
3p32A01 Mainly Alpha;Up-down Bundle;Single alpha-helices involved in coiled-coils or other helix-helix interfaces; 0.9939 6 49 1.20.5.170
3md0A01 Mainly Alpha;Up-down Bundle;Single alpha-helices involved in coiled-coils or other helix-helix interfaces; 0.9797 6 49 1.20.5.170
3tk1A01 Mainly Alpha;Up-down Bundle;Single alpha-helices involved in coiled-coils or other helix-helix interfaces; 0.9445 6 51 1.20.5.170
4jycC01 Mainly Alpha;Up-down Bundle;Single alpha-helices involved in coiled-coils or other helix-helix interfaces; 0.9375 5 49 1.20.5.170
4jycA01 Mainly Alpha;Up-down Bundle;Single alpha-helices involved in coiled-coils or other helix-helix interfaces; 0.9349 5 49 1.20.5.170
ID Description Score Start End GO Terms
AF-A0A172QTN3-F1-model_v4 ATPase/protein kinase 0.9701 3 322 GO:0003924
GO:0005525
GO:0005737
GO:0016301
AF-E6J8C1-F1-model_v4 deleted 0.9684 1 321
AF-A0A3A4KGS4-F1-model_v4 Methylmalonyl Co-A mutase-associated GTPase MeaB 0.9658 1 321 GO:0003924
GO:0005525
GO:0005737
AF-A0A5C4LYN4-F1-model_v4 Methylmalonyl Co-A mutase-associated GTPase MeaB (EC 3.6.5.-) 0.9657 5 200 GO:0003924
GO:0005525
GO:0005737
AF-A0A5B7UNC8-F1-model_v4 GTPase (EC 3.6.-.-) 0.9654 1 319 GO:0003924
GO:0005525
GO:0005737

Map