F307532

General Info

Members Datasets Scaffolds Average Seq Length
200 136 400 283

Family's Representative Sequence

Representative Sequence 3300042876|Ga0451577_0020063|Ga0451577_0020063_718_1713
Length 331
Sequence LAIARFSDFAISDLTTSNGSTVSAGLDRSCIEFENSQIRKIGNSRMSRPFPALDVHPTASAPADAEDLQGVVLAALDDSSVTAVQELPAGWRFFFSSADHRNAAVDILRRNWPEALALAPIDVADEDWARRSQENLGPVRVGKIRISPPWAVDHSGSSTGIDVIIQPSMGFGTGHHATTRLCVALLQQLDLAGRRVLDAGTGSGVLAIVAFRLGAEVVLAVDDDEDAVECARENLELNQVTSGIEFRRADFRSLSGVRFDVVTANLTGGLLLRGEDQLLQAVAPGGALILSGITADEESSVRGAFEPRVDLRARLDEDGWVGLRYEQKIDV

Samples

Sample ID Description Type Environment
1 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
2 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
3 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
4 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
5 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
6 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
7 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
8 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
9 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
10 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
11 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
12 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
13 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
14 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
15 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
16 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
17 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
18 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
19 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
20 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
21 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
22 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
23 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
24 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
25 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
26 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
27 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
28 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
29 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
30 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
31 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
32 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
33 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
34 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
35 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
36 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
37 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
38 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
39 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
40 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
41 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
42 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
43 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
44 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
45 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
46 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
63 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
65 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
66 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
67 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
68 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
69 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
70 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
71 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
72 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
73 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
74 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
75 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
76 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
77 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
78 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
79 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
80 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
81 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
82 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
83 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
84 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
85 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
86 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
87 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
88 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
89 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
90 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
91 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
92 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
93 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
94 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
95 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
96 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
97 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
98 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
99 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
100 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
101 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
102 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
103 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
104 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
105 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
106 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
107 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
108 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
109 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
110 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
111 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
112 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
113 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
114 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
115 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
116 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
117 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
118 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
119 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
120 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
121 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
122 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
123 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
124 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
125 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
126 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
127 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
128 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
129 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
130 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
131 3300059421 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 6_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
132 3300059423 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 8_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
133 3300059424 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 10_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
134 3300059426 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 11_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
135 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
136 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3
Nodule 0
Rhizoplane 0
Rhizosphere 97
Stem 0
Stem Tuber 0
Unclassified 12

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0451577_0020063 3300042876 Bacteria 6138
2 Ga0065715_10161658 3300005293 Bacteria 1623
3 Ga0065707_10002207 3300005295 Bacteria 5523
4 Ga0070677_10018614 3300005333 Unclassified 2503
5 Ga0070680_100392744 3300005336 Unclassified 1182
6 Ga0070692_10245092 3300005345 Bacteria 1070
7 Ga0070669_100204165 3300005353 Bacteria 1556
8 Ga0070675_100238585 3300005354 Bacteria 1588
9 Ga0070667_100226079 3300005367 Bacteria 1667
10 Ga0070694_100131813 3300005444 Bacteria 1806
11 Ga0070663_100170242 3300005455 Bacteria 1683
12 Ga0070699_100054936 3300005518 Bacteria 3448
13 Ga0070684_100217133 3300005535 Bacteria 1744
14 Ga0070696_100136866 3300005546 Bacteria 1786
15 Ga0070704_100071458 3300005549 Bacteria 2522
16 Ga0068857_100140024 3300005577 Bacteria 2187
17 Ga0068864_100133861 3300005618 Bacteria 2230
18 Ga0068858_100003013 3300005842 Bacteria 16894
19 Ga0068858_100206543 3300005842 Bacteria 1858
20 Ga0068860_100034561 3300005843 Bacteria 4850
21 Ga0068860_100235946 3300005843 Bacteria 1778
22 Ga0068862_100223392 3300005844 Bacteria 1706
23 Ga0075364_10048098 3300006051 Bacteria 2779
24 Ga0075367_10023311 3300006178 Bacteria 3482
25 Ga0097621_100214420 3300006237 Bacteria 1675
26 Ga0068871_100104415 3300006358 Bacteria 2377
27 Ga0075428_100000398 3300006844 Bacteria 43056
28 Ga0075428_100367138 3300006844 Unclassified 1544
29 Ga0075428_100488966 3300006844 Unclassified 1317
30 Ga0075430_100453786 3300006846 Bacteria 1058
31 Ga0075433_10054580 3300006852 Bacteria 3486
32 Ga0075433_10055288 3300006852 Bacteria 3464
33 Ga0075434_100060010 3300006871 Bacteria 3782
34 Ga0075429_100410402 3300006880 Unclassified 1186
35 Ga0075436_100026161 3300006914 Bacteria 4018
36 Ga0075435_100000722 3300007076 Bacteria 20521
37 Ga0075435_100008856 3300007076 Bacteria 7249
38 Ga0105240_10211962 3300009093 Bacteria 2263
39 Ga0111539_10000455 3300009094 Bacteria 51281
40 Ga0111539_10001311 3300009094 Bacteria 33232
41 Ga0111539_10131155 3300009094 Bacteria 2934
42 Ga0111539_10358891 3300009094 Bacteria 1696
43 Ga0111539_10364086 3300009094 Bacteria 1683
44 Ga0114129_10000006 3300009147 Bacteria 157531
45 Ga0114129_10094524 3300009147 Bacteria 4140
46 Ga0114129_10585244 3300009147 Unclassified 1448
47 Ga0105243_10357081 3300009148 Unclassified 1344
48 Ga0105243_10414705 3300009148 Unclassified 1254
49 Ga0105248_10177038 3300009177 Unclassified 2404
50 Ga0105248_10207978 3300009177 Bacteria 2205
51 Ga0105249_10013098 3300009553 Bacteria 7320
52 Ga0105249_10268921 3300009553 Bacteria 1697
53 Ga0157369_10207569 3300013105 Bacteria 2054
54 Ga0157378_10048742 3300013297 Bacteria 3766
55 Ga0163162_10110066 3300013306 Bacteria 2852
56 Ga0157375_10242154 3300013308 Bacteria 1963
57 Ga0163163_10000022 3300014325 Bacteria 187289
58 Ga0157380_10091580 3300014326 Bacteria 2510
59 Ga0157380_10102626 3300014326 Bacteria 2385
60 Ga0157380_10142059 3300014326 Bacteria 2064
61 Ga0157380_10204861 3300014326 Bacteria 1753
62 Ga0157380_10540533 3300014326 Bacteria 1141
63 Ga0157379_10107606 3300014968 Bacteria 2503
64 Ga0157379_10306220 3300014968 Bacteria 1449
65 Ga0157376_10511941 3300014969 Bacteria 1181
66 Ga0207695_10183858 3300025913 Bacteria 2010
67 Ga0207646_10287034 3300025922 Bacteria 1487
68 Ga0207681_10057969 3300025923 Bacteria 2650
69 Ga0207650_10124985 3300025925 Bacteria 2007
70 Ga0207706_10128669 3300025933 Bacteria 2227
71 Ga0207670_10060424 3300025936 Bacteria 2582
72 Ga0207669_10324026 3300025937 Unclassified 1180
73 Ga0207711_10116664 3300025941 Bacteria 2380
74 Ga0207651_10012652 3300025960 Bacteria 4787
75 Ga0207712_10025720 3300025961 Bacteria 3914
76 Ga0207658_10206554 3300025986 Bacteria 1643
77 Ga0207703_10060803 3300026035 Bacteria 3090
78 Ga0207678_10238553 3300026067 Bacteria 1557
79 Ga0207648_10031065 3300026089 Bacteria 4724
80 Ga0207648_10239438 3300026089 Unclassified 1615
81 Ga0207675_100696482 3300026118 Bacteria 1024
82 Ga0207683_10005497 3300026121 Bacteria 10858
83 Ga0207683_10023402 3300026121 Bacteria 5314
84 Ga0207428_10000435 3300027907 Bacteria 51355
85 Ga0207428_10047635 3300027907 Unclassified 3441
86 Ga0207428_10123717 3300027907 Unclassified 1982
87 Ga0268264_10072196 3300028381 Bacteria 2927
88 Ga0268264_10477078 3300028381 Unclassified 1213
89 Ga0307408_100035548 3300031548 Bacteria 3497
90 Ga0307405_10075729 3300031731 Bacteria 2181
91 Ga0307413_10180089 3300031824 Bacteria 1506
92 Ga0307410_10069018 3300031852 Bacteria 2443
93 Ga0307406_10014959 3300031901 Bacteria 4478
94 Ga0307406_10125894 3300031901 Unclassified 1790
95 Ga0307407_10029789 3300031903 Bacteria 2937
96 Ga0307412_10056079 3300031911 Bacteria 2624
97 Ga0307409_100016848 3300031995 Bacteria 4850
98 Ga0307409_100017324 3300031995 Bacteria 4797
99 Ga0307416_100069393 3300032002 Bacteria 2916
100 Ga0307416_100139287 3300032002 Bacteria 2202
101 Ga0307416_100190181 3300032002 Bacteria 1935
102 Ga0307414_10026526 3300032004 Bacteria 3730
103 Ga0307415_100035850 3300032126 Bacteria 3244
104 Ga0307415_100217113 3300032126 Bacteria 1530
105 Ga0307415_100483795 3300032126 Bacteria 1078
106 Ga0373934_0000853 3300035086 Bacteria 11043
107 Ga0373956_0077145 3300035119 Unclassified 1526
108 Ga0373957_0010212 3300035120 Unclassified 3096
109 Ga0373955_0026086 3300035172 Unclassified 3006
110 Ga0373933_0005207 3300035724 Bacteria 7096
111 Ga0373933_0137939 3300035724 Bacteria 1538
112 Ga0373933_0284379 3300035724 Bacteria 1069
113 Ga0373937_0000817 3300036401 Bacteria 26647
114 Ga0373937_0760680 3300036401 Bacteria 916
115 Ga0395905_0236656 3300037471 Bacteria 1707
116 Ga0451577_0070315 3300042876 Bacteria 3122
117 Ga0453684_0036116 3300044712 Bacteria 6816
118 Ga0451576_0034636 3300045051 Bacteria 5362
119 Ga0451576_0272277 3300045051 Bacteria 1770
120 Ga0495592_0206224 3300046454 Bacteria 1323
121 Ga0495638_0001946 3300046460 Bacteria 17709
122 Ga0495651_0046009 3300046462 Unclassified 3379
123 Ga0495656_0050823 3300046615 Bacteria 1772
124 Ga0495599_0125384 3300046678 Bacteria 1596
125 Ga0501031_0029970 3300049568 Bacteria 3549
126 Ga0501032_0009360 3300049569 Bacteria 7098
127 Ga0501033_0012644 3300049570 Bacteria 6439
128 Ga0501034_0109259 3300049571 Bacteria 2756
129 Ga0501036_0025048 3300049572 Bacteria 5032
130 Ga0501037_0011622 3300049573 Bacteria 6482
131 Ga0501038_0127058 3300049574 Bacteria 2097
132 Ga0501038_0403977 3300049574 Unclassified 1056
133 Ga0501040_0020097 3300049576 Bacteria 4449
134 Ga0501041_0298692 3300049577 Bacteria 1014
135 Ga0501042_0152680 3300049578 Unclassified 1665
136 Ga0501042_0294470 3300049578 Unclassified 1172
137 Ga0501046_0014066 3300049580 Bacteria 6757
138 Ga0501047_0016629 3300049581 Bacteria 7023
139 Ga0501048_0018372 3300049582 Bacteria 5143
140 Ga0501048_0047073 3300049582 Bacteria 3077
141 Ga0501069_0020263 3300049585 Bacteria 3602
142 Ga0501070_0098557 3300049586 Bacteria 2417
143 Ga0501071_0151100 3300049587 Bacteria 1732
144 Ga0501071_0179439 3300049587 Bacteria 1586
145 Ga0501072_0133262 3300049588 Bacteria 1981
146 Ga0501072_0289063 3300049588 Unclassified 1303
147 Ga0501073_0043374 3300049589 Bacteria 3171
148 Ga0501073_0082679 3300049589 Bacteria 2234
149 Ga0501073_0187156 3300049589 Bacteria 1433
150 Ga0501074_0034355 3300049590 Bacteria 3675
151 Ga0501075_0021038 3300049591 Bacteria 4753
152 Ga0501075_0047328 3300049591 Bacteria 3232
153 Ga0501076_0002811 3300049592 Bacteria 12034
154 Ga0501076_0030615 3300049592 Bacteria 4193
155 Ga0501076_0034454 3300049592 Bacteria 3958
156 Ga0501077_0052649 3300049593 Bacteria 2585
157 Ga0501079_0038464 3300049741 Bacteria 3689
158 Ga0501079_0054161 3300049741 Bacteria 3094
159 Ga0501080_0017158 3300049742 Bacteria 6687
160 Ga0501080_0058194 3300049742 Bacteria 3598
161 Ga0501080_0346095 3300049742 Bacteria 1343
162 Ga0501081_0034377 3300049743 Bacteria 3449
163 Ga0501081_0172436 3300049743 Bacteria 1562
164 Ga0501083_0002263 3300049744 Bacteria 13154
165 Ga0501083_0161148 3300049744 Bacteria 1467
166 Ga0501083_0219867 3300049744 Bacteria 1238
167 Ga0501035_0004481 3300049822 Bacteria 13256
168 Ga0501044_0047722 3300049823 Bacteria 4428
169 nmdc:mga00v17_67667_c1 3300050491 Bacteria 2207
170 nmdc:mga05p37_25_c1 3300050507 Bacteria 116982
171 nmdc:mga05p37_85112_c1 3300050507 Bacteria 3896
172 nmdc:mga0qj67_401658_c1 3300050509 Bacteria 1106
173 nmdc:mga08y16_12_c1 3300050511 Bacteria 438455
174 nmdc:mga08y16_161725_c1 3300050511 Bacteria 2326
175 nmdc:mga08y16_290312_c1 3300050511 Bacteria 1686
176 nmdc:mga08y16_4402_c1 3300050511 Bacteria 14723
177 nmdc:mga08y16_47850_c1 3300050511 Bacteria 4476
178 nmdc:mga0rr50_13138_c1 3300050513 Bacteria 5379
179 nmdc:mga08x19_23835_c1 3300050514 Bacteria 3798
180 nmdc:mga0a205_21765_c1 3300050515 Bacteria 6062
181 nmdc:mga0a205_5457_c2 3300050515 Bacteria 9974
182 Ga0495601_0028524 3300053077 Bacteria 3458
183 Ga0495601_0567721 3300053077 Bacteria 729
184 Ga0495595_0053231 3300053084 Bacteria 1880
185 Ga0495619_0207324 3300053085 Bacteria 1357
186 Ga0500555_000132 3300053103 Bacteria 35621
187 Ga0500616_0002064 3300053153 Bacteria 17582
188 Ga0500645_000540 3300053730 Bacteria 25187
189 Ga0501084_0023654 3300054114 Bacteria 5123
190 Ga0501084_0216095 3300054114 Bacteria 1617
191 Ga0590071_000013 3300059421 Bacteria 45701
192 Ga0590074_000169 3300059423 Bacteria 8027
193 Ga0590075_000167 3300059424 Bacteria 18069
194 Ga0590075_000301 3300059424 Bacteria 13842
195 Ga0590077_000157 3300059426 Bacteria 19169
196 Ga0590077_002354 3300059426 Bacteria 4068
197 Ga0501082_0044067 3300060353 Bacteria 3849
198 Ga0501082_0119294 3300060353 Unclassified 2286
199 Ga0530510_0004954 3300061734 Bacteria 9196
200 Ga0530510_0020921 3300061734 Bacteria 4653
201 Ga0451577_0020063
202 Ga0065715_10161658
203 Ga0065707_10002207
204 Ga0070677_10018614
205 Ga0070680_100392744
206 Ga0070692_10245092
207 Ga0070669_100204165
208 Ga0070675_100238585
209 Ga0070667_100226079
210 Ga0070694_100131813
211 Ga0070663_100170242
212 Ga0070699_100054936
213 Ga0070684_100217133
214 Ga0070696_100136866
215 Ga0070704_100071458
216 Ga0068857_100140024
217 Ga0068864_100133861
218 Ga0068858_100003013
219 Ga0068858_100206543
220 Ga0068860_100034561
221 Ga0068860_100235946
222 Ga0068862_100223392
223 Ga0075364_10048098
224 Ga0075367_10023311
225 Ga0097621_100214420
226 Ga0068871_100104415
227 Ga0075428_100000398
228 Ga0075428_100367138
229 Ga0075428_100488966
230 Ga0075430_100453786
231 Ga0075433_10054580
232 Ga0075433_10055288
233 Ga0075434_100060010
234 Ga0075429_100410402
235 Ga0075436_100026161
236 Ga0075435_100000722
237 Ga0075435_100008856
238 Ga0105240_10211962
239 Ga0111539_10000455
240 Ga0111539_10001311
241 Ga0111539_10131155
242 Ga0111539_10358891
243 Ga0111539_10364086
244 Ga0114129_10000006
245 Ga0114129_10094524
246 Ga0114129_10585244
247 Ga0105243_10357081
248 Ga0105243_10414705
249 Ga0105248_10177038
250 Ga0105248_10207978
251 Ga0105249_10013098
252 Ga0105249_10268921
253 Ga0157369_10207569
254 Ga0157378_10048742
255 Ga0163162_10110066
256 Ga0157375_10242154
257 Ga0163163_10000022
258 Ga0157380_10091580
259 Ga0157380_10102626
260 Ga0157380_10142059
261 Ga0157380_10204861
262 Ga0157380_10540533
263 Ga0157379_10107606
264 Ga0157379_10306220
265 Ga0157376_10511941
266 Ga0207695_10183858
267 Ga0207646_10287034
268 Ga0207681_10057969
269 Ga0207650_10124985
270 Ga0207706_10128669
271 Ga0207670_10060424
272 Ga0207669_10324026
273 Ga0207711_10116664
274 Ga0207651_10012652
275 Ga0207712_10025720
276 Ga0207658_10206554
277 Ga0207703_10060803
278 Ga0207678_10238553
279 Ga0207648_10031065
280 Ga0207648_10239438
281 Ga0207675_100696482
282 Ga0207683_10005497
283 Ga0207683_10023402
284 Ga0207428_10000435
285 Ga0207428_10047635
286 Ga0207428_10123717
287 Ga0268264_10072196
288 Ga0268264_10477078
289 Ga0307408_100035548
290 Ga0307405_10075729
291 Ga0307413_10180089
292 Ga0307410_10069018
293 Ga0307406_10014959
294 Ga0307406_10125894
295 Ga0307407_10029789
296 Ga0307412_10056079
297 Ga0307409_100016848
298 Ga0307409_100017324
299 Ga0307416_100069393
300 Ga0307416_100139287
301 Ga0307416_100190181
302 Ga0307414_10026526
303 Ga0307415_100035850
304 Ga0307415_100217113
305 Ga0307415_100483795
306 Ga0373934_0000853
307 Ga0373956_0077145
308 Ga0373957_0010212
309 Ga0373955_0026086
310 Ga0373933_0005207
311 Ga0373933_0137939
312 Ga0373933_0284379
313 Ga0373937_0000817
314 Ga0373937_0760680
315 Ga0395905_0236656
316 Ga0451577_0070315
317 Ga0453684_0036116
318 Ga0451576_0034636
319 Ga0451576_0272277
320 Ga0495592_0206224
321 Ga0495638_0001946
322 Ga0495651_0046009
323 Ga0495656_0050823
324 Ga0495599_0125384
325 Ga0501031_0029970
326 Ga0501032_0009360
327 Ga0501033_0012644
328 Ga0501034_0109259
329 Ga0501036_0025048
330 Ga0501037_0011622
331 Ga0501038_0127058
332 Ga0501038_0403977
333 Ga0501040_0020097
334 Ga0501041_0298692
335 Ga0501042_0152680
336 Ga0501042_0294470
337 Ga0501046_0014066
338 Ga0501047_0016629
339 Ga0501048_0018372
340 Ga0501048_0047073
341 Ga0501069_0020263
342 Ga0501070_0098557
343 Ga0501071_0151100
344 Ga0501071_0179439
345 Ga0501072_0133262
346 Ga0501072_0289063
347 Ga0501073_0043374
348 Ga0501073_0082679
349 Ga0501073_0187156
350 Ga0501074_0034355
351 Ga0501075_0021038
352 Ga0501075_0047328
353 Ga0501076_0002811
354 Ga0501076_0030615
355 Ga0501076_0034454
356 Ga0501077_0052649
357 Ga0501079_0038464
358 Ga0501079_0054161
359 Ga0501080_0017158
360 Ga0501080_0058194
361 Ga0501080_0346095
362 Ga0501081_0034377
363 Ga0501081_0172436
364 Ga0501083_0002263
365 Ga0501083_0161148
366 Ga0501083_0219867
367 Ga0501035_0004481
368 Ga0501044_0047722
369 nmdc:mga00v17_67667_c1
370 nmdc:mga05p37_25_c1
371 nmdc:mga05p37_85112_c1
372 nmdc:mga0qj67_401658_c1
373 nmdc:mga08y16_12_c1
374 nmdc:mga08y16_161725_c1
375 nmdc:mga08y16_290312_c1
376 nmdc:mga08y16_4402_c1
377 nmdc:mga08y16_47850_c1
378 nmdc:mga0rr50_13138_c1
379 nmdc:mga08x19_23835_c1
380 nmdc:mga0a205_21765_c1
381 nmdc:mga0a205_5457_c2
382 Ga0495601_0028524
383 Ga0495601_0567721
384 Ga0495595_0053231
385 Ga0495619_0207324
386 Ga0500555_000132
387 Ga0500616_0002064
388 Ga0500645_000540
389 Ga0501084_0023654
390 Ga0501084_0216095
391 Ga0590071_000013
392 Ga0590074_000169
393 Ga0590075_000167
394 Ga0590075_000301
395 Ga0590077_000157
396 Ga0590077_002354
397 Ga0501082_0044067
398 Ga0501082_0119294
399 Ga0530510_0004954
400 Ga0530510_0020921

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF06325

PrmA

Ribosomal protein L11 methyltransferase (PrmA)

93

328

0.92

PF08241

Methyltransf_11

Methyltransferase domain

197

290

0.92

PF05175

MTS

Methyltransferase small domain

173

265

0.87

PF13649

Methyltransf_25

Methyltransferase domain

196

286

0.86

PF13847

Methyltransf_31

Methyltransferase domain

190

300

0.83

Structural Annotation

Top 5 Hits

ID Description Score Start End
3grz-assembly1.cif.gz_B crystal structure of ribosomal protein l11 methylase from lactobacillus delbrueckii subsp. bulgaricus 0.9085 85 269
3grz-assembly1.cif.gz_A crystal structure of ribosomal protein l11 methylase from lactobacillus delbrueckii subsp. bulgaricus 0.9059 85 269
3grz-assembly1.cif.gz_A crystal structure of ribosomal protein l11 methylase from lactobacillus delbrueckii subsp. bulgaricus 0.8699 85 269
3grz-assembly1.cif.gz_B crystal structure of ribosomal protein l11 methylase from lactobacillus delbrueckii subsp. bulgaricus 0.8681 85 269
4y2h-assembly1.cif.gz_A crystal structure of human protein arginine methyltransferase prmt6 bound to sah and an aryl pyrazole inhibitor 0.8526 123 233
ID Description Score Start End Superfamily
2nxjB03 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.9405 120 267 3.40.50.150
af_Q2FXZ4_114_311_3.40.50.150 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.9388 83 269 3.40.50.150
3grzA02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.9379 118 269 3.40.50.150
af_P0A8T1_101_293_3.40.50.150 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.9208 83 270 3.40.50.150
3cjtC02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.9144 81 267 3.40.50.150
ID Description Score Start End GO Terms
AF-A0A0R1X8M2-F1-model_v4 Ribosomal protein L11 methyltransferase 0.9562 114 267 GO:0005840
GO:0008276
GO:0032259
AF-A0A831KGV4-F1-model_v4 Methyltransferase domain-containing protein 0.9483 139 271 GO:0008276
GO:0032259
AF-A0A3D2E544-F1-model_v4 50S ribosomal protein L11 methyltransferase 0.9445 116 271 GO:0005840
GO:0008276
GO:0032259
AF-A0A1H5NF52-F1-model_v4 Ribosomal protein L11 methyltransferase (PrmA) 0.9443 144 270 GO:0005840
GO:0008276
GO:0032259
AF-A0A5P8Q685-F1-model_v4 deleted 0.9418 88 267

Map