F306158
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 199 | 138 | 398 | 679 |
Family's Representative Sequence
| Representative Sequence | 3300044901|Ga0466960_0016450|Ga0466960_0016450_642_2942 |
| Length | 754 |
| Sequence | VLEQGIHLRVREVPGHGVCSRPTTTRSSGIAVLPGRSRSTHGTEKENWLAQRQRRPGRTGTAKRGQRRPRDNEGILPILAMAVREVETQLRHGRVLRTKFQVTALLAREERARVRSDQGVTDAERDGHLKRLDGIATILAQIAAREPSLFALLGEDAEVSDSARRLKREMQVAGGLEPVRSDRQVVPRSVVAAQLANPFMAPDFSAVEARRRGQERRLAGWELIEPLLSSFESAAAGAPSCMQLPDPAPSVLLPRGLELMPHQARLVTAAARGHRTFLLADEPGLGKTAQALLAAQAAGAYPLLCVVPSVVKTNWAREAARWTPSRSVTVVHGNGEEVDGFADIVVVNYEVLDRHVGWIASHGFRGMVVDEAHFIKNKKSQRSQHVLEIADRVRARVARPLTMALTGTPLINDIDDFRAIWQFLGWIDATRPGPVLMAALEDTGLTPLDRGFHEAARQAVIDLGIVRRRKVDVAGEIPARRIADLPVELDPAAARSIRKAERELALRLVQRYDAAVAAREERSGESVEGIDQELVRRVAGWELSDATGSSGSSTGENVFAMVRRIGQAKAALAADYAVQLARSAGKVVFFAKHIDVMDAASELFEAQGVRYASVRGDQTPAVRQRNIDAFVGDPEVAVAVCSLTAAGVGLNLQVASNVVLAELSWTNAEQTQAIDRVHRIGQTEPVTAWRIIAAQTIDARIAELIDSKAGLAARALDGSEEEAGSSADVQLEALVAMLGEALLDRQRQAARRVG |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300044901 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R | Metagenome | Rhizosphere |
| 2 | 3300000549 | Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - LJQ_Illumina_Assembled | Metagenome | Rhizosphere |
| 3 | 3300005327 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG | Metagenome | Rhizosphere |
| 4 | 3300005336 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG | Metagenome | Rhizosphere |
| 5 | 3300005337 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG | Metagenome | Rhizosphere |
| 6 | 3300005338 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 | Metagenome | Rhizosphere |
| 7 | 3300005339 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG | Metagenome | Rhizosphere |
| 8 | 3300005355 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG | Metagenome | Rhizosphere |
| 9 | 3300005366 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG | Metagenome | Rhizosphere |
| 10 | 3300005435 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG | Metagenome | Rhizosphere |
| 11 | 3300005436 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG | Metagenome | Rhizosphere |
| 12 | 3300005441 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG | Metagenome | Rhizosphere |
| 13 | 3300005455 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG | Metagenome | Rhizosphere |
| 14 | 3300005458 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG | Metagenome | Rhizosphere |
| 15 | 3300005471 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG | Metagenome | Rhizosphere |
| 16 | 3300005518 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG | Metagenome | Rhizosphere |
| 17 | 3300005530 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG | Metagenome | Rhizosphere |
| 18 | 3300005535 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG | Metagenome | Rhizosphere |
| 19 | 3300005548 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG | Metagenome | Rhizosphere |
| 20 | 3300005617 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 | Metagenome | Rhizosphere |
| 21 | 3300005937 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 | Metagenome | Rhizosphere |
| 22 | 3300005981 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 | Metagenome | Rhizosphere |
| 23 | 3300005983 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 | Metagenome | Rhizosphere |
| 24 | 3300005985 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 | Metagenome | Rhizosphere |
| 25 | 3300006028 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG | Metagenome | Rhizosphere |
| 26 | 3300006051 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 | Metagenome | Endosphere |
| 27 | 3300006844 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 | Metagenome | Rhizosphere |
| 28 | 3300006846 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 | Metagenome | Rhizosphere |
| 29 | 3300006847 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 | Metagenome | Rhizosphere |
| 30 | 3300006852 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 | Metagenome | Rhizosphere |
| 31 | 3300006880 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 | Metagenome | Rhizosphere |
| 32 | 3300006931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 33 | 3300009094 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 34 | 3300009147 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 35 | 3300009176 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG | Metagenome | Rhizosphere |
| 36 | 3300013105 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG | Metagenome | Rhizosphere |
| 37 | 3300013307 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG | Metagenome | Rhizosphere |
| 38 | 3300014969 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG | Metagenome | Rhizosphere |
| 39 | 3300020080 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-4 (Metagenome Metatranscriptome) (v2) (version 2) | Metatranscriptome | Rhizosphere |
| 40 | 3300020082 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) | Metatranscriptome | Rhizosphere |
| 41 | 3300021388 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 | Metagenome | Unclassified |
| 42 | 3300025908 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 43 | 3300025909 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 44 | 3300025912 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 45 | 3300025917 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 46 | 3300025919 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 47 | 3300025921 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 48 | 3300025922 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 49 | 3300025927 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 50 | 3300025928 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 51 | 3300025929 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 52 | 3300025932 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 53 | 3300025941 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 54 | 3300026067 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 55 | 3300026075 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 56 | 3300026116 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 57 | 3300027907 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) | Metagenome | Rhizosphere |
| 58 | 3300028381 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 59 | 3300028573 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG | Metagenome | Rhizosphere |
| 60 | 3300028654 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG | Metagenome | Rhizosphere |
| 61 | 3300028800 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG | Metagenome | Rhizosphere |
| 62 | 3300031238 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG | Metagenome | Rhizosphere |
| 63 | 3300031247 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG | Metagenome | Rhizosphere |
| 64 | 3300031249 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG | Metagenome | Rhizosphere |
| 65 | 3300031456 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM | Metagenome | Unclassified |
| 66 | 3300031852 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 | Metagenome | Rhizosphere |
| 67 | 3300031995 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 | Metagenome | Rhizosphere |
| 68 | 3300032004 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 | Metagenome | Rhizosphere |
| 69 | 3300032126 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 | Metagenome | Rhizosphere |
| 70 | 3300037068 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 | Metagenome | Rhizosphere |
| 71 | 3300037853 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 | Metagenome | Unclassified |
| 72 | 3300038443 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 | Metagenome | Rhizosphere |
| 73 | 3300039437 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 | Metagenome | Unclassified |
| 74 | 3300041494 | White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG | Metagenome | Unclassified |
| 75 | 3300041509 | White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_6 MetaG | Metagenome | Unclassified |
| 76 | 3300044658 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R | Metagenome | Rhizosphere |
| 77 | 3300044683 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R | Metagenome | Rhizosphere |
| 78 | 3300044684 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R | Metagenome | Rhizosphere |
| 79 | 3300044693 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R | Metagenome | Rhizosphere |
| 80 | 3300044694 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R | Metagenome | Rhizosphere |
| 81 | 3300044706 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R | Metagenome | Rhizosphere |
| 82 | 3300044719 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R | Metagenome | Rhizosphere |
| 83 | 3300044765 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R | Metagenome | Rhizosphere |
| 84 | 3300044842 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R | Metagenome | Rhizosphere |
| 85 | 3300045836 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R | Metagenome | Rhizosphere |
| 86 | 3300045976 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R | Metagenome | Rhizosphere |
| 87 | 3300046529 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere | Metagenome | Rhizosphere |
| 88 | 3300046535 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere | Metagenome | Rhizosphere |
| 89 | 3300046543 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere | Metagenome | Rhizosphere |
| 90 | 3300048905 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 | Metagenome | Rhizoplane |
| 91 | 3300048912 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled | Metagenome | Rhizoplane |
| 92 | 3300048914 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 | Metagenome | Rhizoplane |
| 93 | 3300048916 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 | Metagenome | Rhizoplane |
| 94 | 3300048924 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 | Metagenome | Unclassified |
| 95 | 3300048925 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled | Metagenome | Unclassified |
| 96 | 3300048928 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 | Metagenome | Unclassified |
| 97 | 3300048929 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 | Metagenome | Unclassified |
| 98 | 3300049571 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 99 | 3300049572 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 100 | 3300049579 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 101 | 3300049581 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 102 | 3300049583 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 | Metagenome | Rhizosphere |
| 103 | 3300049586 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 | Metagenome | Rhizosphere |
| 104 | 3300049587 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 | Metagenome | Rhizosphere |
| 105 | 3300049589 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 | Metagenome | Rhizosphere |
| 106 | 3300049742 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 | Metagenome | Rhizosphere |
| 107 | 3300049822 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 108 | 3300049823 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 109 | 3300049824 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 110 | 3300050507 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation | Metagenome | Rhizosphere |
| 111 | 3300050508 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation | Metagenome | Rhizosphere |
| 112 | 3300050509 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation | Metagenome | Rhizosphere |
| 113 | 3300050510 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation | Metagenome | Rhizosphere |
| 114 | 3300050515 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation | Metagenome | Rhizosphere |
| 115 | 3300050516 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation | Metagenome | Endosphere |
| 116 | 3300053077 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere | Metagenome | Rhizosphere |
| 117 | 3300053104 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere | Metagenome | Endosphere |
| 118 | 3300053117 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere | Metagenome | Endosphere |
| 119 | 3300053136 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere | Metagenome | Endosphere |
| 120 | 3300061719 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 | Metagenome | Rhizosphere |
| 121 | 2558860112 | Pseudonocardia acaciae DSM 45401 | Isolate | Unclassified |
| 122 | 2643221567 | Phycicoccus sp. Root563 | Isolate | Unclassified |
| 123 | 2643221615 | Nocardioides sp. Root224 | Isolate | Unclassified |
| 124 | 2643221624 | Phycicoccus sp. Root101 | Isolate | Unclassified |
| 125 | 2643221635 | Yonghaparkia sp. Root332 | Isolate | Unclassified |
| 126 | 2643221657 | Nocardioides sp. Root1257 | Isolate | Unclassified |
| 127 | 2643221679 | Angustibacter sp. Root456 | Isolate | Unclassified |
| 128 | 2643221681 | Aeromicrobium sp. Root472D3 | Isolate | Unclassified |
| 129 | 2643221697 | Aeromicrobium sp. Root495 | Isolate | Unclassified |
| 130 | 2643221961 | Aeromicrobium sp. Root236 | Isolate | Unclassified |
| 131 | 2643221962 | Aeromicrobium sp. Root344 | Isolate | Unclassified |
| 132 | 2811994880 | Cellulomonas sp. SLBN-39 | Isolate | Unclassified |
| 133 | 2818991318 | Humibacillus xanthopallidus SLBN-155 | Isolate | Unclassified |
| 134 | 2837268691 | Jiangella endophytica KE2-3 | Isolate | Rhizosphere |
| 135 | 2868088558 | Phytoactinopolyspora endophytica EGI 60009 | Isolate | Unclassified |
| 136 | 2887443736 | Ruania rhizosphaerae LNNU 22110 | Isolate | Rhizosphere |
| 137 | 2915358134 | Pseudonocardia pini CAP47R | Isolate | Unclassified |
| 138 | 2964326757 | Planctomonas psychrotolerans J5903 | Isolate | Rhizosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 89.95 |
| Metatranscriptomes | 1.01 |
| Isolates | 9.05 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 2.51 |
| Nodule | 0 |
| Rhizoplane | 5.53 |
| Rhizosphere | 77.39 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 0 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | Ga0466960_0016450 | 3300044901 | Bacteria | 3210 |
| 2 | LJQas_1001642 | 3300000549 | Bacteria | 3286 |
| 3 | Ga0070658_10000296 | 3300005327 | Bacteria | 43235 |
| 4 | Ga0070658_10000915 | 3300005327 | Bacteria | 25241 |
| 5 | Ga0070680_100000235 | 3300005336 | Bacteria | 36574 |
| 6 | Ga0070682_100025769 | 3300005337 | Bacteria | 3512 |
| 7 | Ga0068868_100004589 | 3300005338 | Bacteria | 9698 |
| 8 | Ga0070660_100029590 | 3300005339 | Bacteria | 4106 |
| 9 | Ga0070671_100016175 | 3300005355 | Bacteria | 6033 |
| 10 | Ga0070659_100000870 | 3300005366 | Bacteria | 22054 |
| 11 | Ga0070659_100001345 | 3300005366 | Bacteria | 17704 |
| 12 | Ga0070714_100013589 | 3300005435 | Bacteria | 6526 |
| 13 | Ga0070713_100009418 | 3300005436 | Bacteria | 6992 |
| 14 | Ga0070700_100000171 | 3300005441 | Bacteria | 36855 |
| 15 | Ga0070663_100062489 | 3300005455 | Bacteria | 2685 |
| 16 | Ga0070681_10000576 | 3300005458 | Bacteria | 30275 |
| 17 | Ga0070681_10035832 | 3300005458 | Bacteria | 4983 |
| 18 | Ga0070698_100002539 | 3300005471 | Bacteria | 20101 |
| 19 | Ga0070699_100011761 | 3300005518 | Bacteria | 7552 |
| 20 | Ga0070679_100002819 | 3300005530 | Bacteria | 15803 |
| 21 | Ga0070684_100023496 | 3300005535 | Bacteria | 5159 |
| 22 | Ga0070684_100031532 | 3300005535 | Bacteria | 4513 |
| 23 | Ga0070684_100091925 | 3300005535 | Bacteria | 2700 |
| 24 | Ga0070665_100001588 | 3300005548 | Bacteria | 26177 |
| 25 | Ga0068859_100105125 | 3300005617 | Bacteria | 2883 |
| 26 | Ga0081455_10001177 | 3300005937 | Bacteria | 32692 |
| 27 | Ga0081455_10010333 | 3300005937 | Bacteria | 9487 |
| 28 | Ga0081538_10000439 | 3300005981 | Bacteria | 46752 |
| 29 | Ga0081540_1000596 | 3300005983 | Bacteria | 34598 |
| 30 | Ga0081539_10018274 | 3300005985 | Bacteria | 4873 |
| 31 | Ga0070717_10003337 | 3300006028 | Bacteria | 11464 |
| 32 | Ga0075364_10047697 | 3300006051 | Bacteria | 2791 |
| 33 | Ga0075428_100003931 | 3300006844 | Bacteria | 16302 |
| 34 | Ga0075428_100032285 | 3300006844 | Bacteria | 5782 |
| 35 | Ga0075430_100006502 | 3300006846 | Bacteria | 9855 |
| 36 | Ga0075430_100024577 | 3300006846 | Bacteria | 5125 |
| 37 | Ga0075431_100001557 | 3300006847 | Bacteria | 21285 |
| 38 | Ga0075431_100006583 | 3300006847 | Bacteria | 11542 |
| 39 | Ga0075433_10050054 | 3300006852 | Bacteria | 3637 |
| 40 | Ga0075429_100002608 | 3300006880 | Bacteria | 15195 |
| 41 | Ga0075429_100006990 | 3300006880 | Bacteria | 9806 |
| 42 | Ga0097620_100105120 | 3300006931 | Bacteria | 2883 |
| 43 | Ga0111539_10008516 | 3300009094 | Bacteria | 13032 |
| 44 | Ga0114129_10039370 | 3300009147 | Bacteria | 6664 |
| 45 | Ga0114129_10043164 | 3300009147 | Bacteria | 6345 |
| 46 | Ga0105242_10091697 | 3300009176 | Bacteria | 2558 |
| 47 | Ga0157369_10000069 | 3300013105 | Bacteria | 143271 |
| 48 | Ga0157369_10001127 | 3300013105 | Bacteria | 33430 |
| 49 | Ga0157369_10012289 | 3300013105 | Bacteria | 9725 |
| 50 | Ga0157369_10111197 | 3300013105 | Bacteria | 2912 |
| 51 | Ga0157372_10000091 | 3300013307 | Bacteria | 93310 |
| 52 | Ga0157376_10011493 | 3300014969 | Bacteria | 6529 |
| 53 | Ga0206350_10538963 | 3300020080 | Bacteria | 2853 |
| 54 | Ga0206353_10537478 | 3300020082 | Bacteria | 50726 |
| 55 | Ga0213875_10003126 | 3300021388 | Bacteria | 9531 |
| 56 | Ga0207643_10014624 | 3300025908 | Bacteria | 4266 |
| 57 | Ga0207705_10003039 | 3300025909 | Bacteria | 12799 |
| 58 | Ga0207705_10007019 | 3300025909 | Bacteria | 8307 |
| 59 | Ga0207707_10000500 | 3300025912 | Bacteria | 40397 |
| 60 | Ga0207660_10002679 | 3300025917 | Bacteria | 11684 |
| 61 | Ga0207657_10004108 | 3300025919 | Bacteria | 15454 |
| 62 | Ga0207657_10053515 | 3300025919 | Bacteria | 3496 |
| 63 | Ga0207652_10000050 | 3300025921 | Bacteria | 120417 |
| 64 | Ga0207652_10013926 | 3300025921 | Bacteria | 6510 |
| 65 | Ga0207646_10005990 | 3300025922 | Bacteria | 12669 |
| 66 | Ga0207687_10051422 | 3300025927 | Bacteria | 2872 |
| 67 | Ga0207700_10050338 | 3300025928 | Bacteria | 3104 |
| 68 | Ga0207664_10002131 | 3300025929 | Bacteria | 13021 |
| 69 | Ga0207664_10008644 | 3300025929 | Bacteria | 7118 |
| 70 | Ga0207664_10046461 | 3300025929 | Bacteria | 3407 |
| 71 | Ga0207664_10071139 | 3300025929 | Bacteria | 2801 |
| 72 | Ga0207690_10000135 | 3300025932 | Bacteria | 60333 |
| 73 | Ga0207711_10077414 | 3300025941 | Bacteria | 2899 |
| 74 | Ga0207678_10038094 | 3300026067 | Bacteria | 4180 |
| 75 | Ga0207708_10000030 | 3300026075 | Bacteria | 157064 |
| 76 | Ga0207674_10054365 | 3300026116 | Bacteria | 4076 |
| 77 | Ga0207428_10009913 | 3300027907 | Bacteria | 8532 |
| 78 | Ga0268264_10061965 | 3300028381 | Bacteria | 3140 |
| 79 | Ga0265334_10016098 | 3300028573 | Bacteria | 3095 |
| 80 | Ga0265322_10010501 | 3300028654 | Bacteria | 2687 |
| 81 | Ga0265338_10002693 | 3300028800 | Bacteria | 26107 |
| 82 | Ga0265332_10027792 | 3300031238 | Bacteria | 2477 |
| 83 | Ga0265340_10024699 | 3300031247 | Bacteria | 3050 |
| 84 | Ga0265339_10026459 | 3300031249 | Bacteria | 3323 |
| 85 | Ga0307513_10004399 | 3300031456 | Bacteria | 18811 |
| 86 | Ga0307410_10005986 | 3300031852 | Bacteria | 6513 |
| 87 | Ga0307409_100011814 | 3300031995 | Bacteria | 5528 |
| 88 | Ga0307409_100032011 | 3300031995 | Bacteria | 3806 |
| 89 | Ga0307414_10070813 | 3300032004 | Bacteria | 2513 |
| 90 | Ga0307415_100024204 | 3300032126 | Bacteria | 3787 |
| 91 | Ga0307415_100056271 | 3300032126 | Bacteria | 2696 |
| 92 | Ga0373925_0009645 | 3300037068 | Bacteria | 7033 |
| 93 | Ga0436364_0239077 | 3300037853 | Bacteria | 8348 |
| 94 | Ga0436364_0617337 | 3300037853 | Bacteria | 5103 |
| 95 | Ga0436364_1017454 | 3300037853 | Bacteria | 9385 |
| 96 | Ga0395901_0008314 | 3300038443 | Bacteria | 10490 |
| 97 | Ga0395901_0019663 | 3300038443 | Bacteria | 6904 |
| 98 | Ga0436365_0942952 | 3300039437 | Bacteria | 24766 |
| 99 | Ga0451837_0367777 | 3300041494 | Bacteria | 2822 |
| 100 | Ga0451843_0396319 | 3300041509 | Bacteria | 2915 |
| 101 | Ga0466972_0010589 | 3300044658 | Bacteria | 4626 |
| 102 | Ga0466965_0002263 | 3300044683 | Bacteria | 8112 |
| 103 | Ga0466965_0046256 | 3300044683 | Bacteria | 2154 |
| 104 | Ga0466966_0039398 | 3300044684 | Bacteria | 3043 |
| 105 | Ga0466961_0013421 | 3300044693 | Bacteria | 5246 |
| 106 | Ga0466961_0014873 | 3300044693 | Bacteria | 5000 |
| 107 | Ga0466961_0023254 | 3300044693 | Bacteria | 3987 |
| 108 | Ga0466961_0043491 | 3300044693 | Bacteria | 2877 |
| 109 | Ga0466963_0060558 | 3300044694 | Bacteria | 2528 |
| 110 | Ga0466964_0002712 | 3300044706 | Bacteria | 6350 |
| 111 | Ga0466971_0044378 | 3300044719 | Bacteria | 1996 |
| 112 | Ga0466970_0006955 | 3300044765 | Bacteria | 5665 |
| 113 | Ga0466957_0059566 | 3300044842 | Bacteria | 2340 |
| 114 | Ga0466960_0017705 | 3300044901 | Bacteria | 3112 |
| 115 | Ga0466958_0019947 | 3300045836 | Bacteria | 3906 |
| 116 | Ga0466958_0025494 | 3300045836 | Bacteria | 3487 |
| 117 | Ga0466958_0029557 | 3300045836 | Bacteria | 3252 |
| 118 | Ga0466958_0048606 | 3300045836 | Bacteria | 2564 |
| 119 | Ga0466967_0005008 | 3300045976 | Bacteria | 9075 |
| 120 | Ga0466967_0007038 | 3300045976 | Bacteria | 8056 |
| 121 | Ga0466967_0015722 | 3300045976 | Bacteria | 5943 |
| 122 | Ga0466967_0022111 | 3300045976 | Bacteria | 5182 |
| 123 | Ga0466967_0043684 | 3300045976 | Bacteria | 3882 |
| 124 | Ga0466967_0045774 | 3300045976 | Bacteria | 3804 |
| 125 | Ga0466967_0082893 | 3300045976 | Bacteria | 2899 |
| 126 | Ga0466967_0105866 | 3300045976 | Bacteria | 2577 |
| 127 | Ga0495652_0087829 | 3300046529 | Bacteria | 2549 |
| 128 | Ga0495586_0013265 | 3300046535 | Bacteria | 4368 |
| 129 | Ga0495645_0089264 | 3300046543 | Bacteria | 2204 |
| 130 | Ga0496102_0000221 | 3300048905 | Bacteria | 75427 |
| 131 | Ga0496102_0008999 | 3300048905 | Bacteria | 8570 |
| 132 | Ga0496102_0073506 | 3300048905 | Bacteria | 3142 |
| 133 | Ga0496102_0093912 | 3300048905 | Bacteria | 2779 |
| 134 | Ga0496109_0052597 | 3300048912 | Bacteria | 3712 |
| 135 | Ga0496109_0065694 | 3300048912 | Bacteria | 3321 |
| 136 | Ga0496109_0104090 | 3300048912 | Bacteria | 2635 |
| 137 | Ga0496109_0105516 | 3300048912 | Bacteria | 2617 |
| 138 | Ga0496111_0005430 | 3300048914 | Bacteria | 8167 |
| 139 | Ga0496111_0045776 | 3300048914 | Bacteria | 3148 |
| 140 | Ga0496113_0030148 | 3300048916 | Bacteria | 3924 |
| 141 | Ga0496121_0014397 | 3300048924 | Bacteria | 8397 |
| 142 | Ga0496122_0000243 | 3300048925 | Bacteria | 122429 |
| 143 | Ga0496125_0000015 | 3300048928 | Bacteria | 516648 |
| 144 | Ga0496126_0000037 | 3300048929 | Bacteria | 353425 |
| 145 | Ga0496126_0040650 | 3300048929 | Bacteria | 4310 |
| 146 | Ga0496126_0063567 | 3300048929 | Bacteria | 3309 |
| 147 | Ga0501034_0007396 | 3300049571 | Bacteria | 11694 |
| 148 | Ga0501036_0060119 | 3300049572 | Bacteria | 3219 |
| 149 | Ga0501043_0064943 | 3300049579 | Bacteria | 2866 |
| 150 | Ga0501047_0000214 | 3300049581 | Bacteria | 69350 |
| 151 | Ga0501067_0001857 | 3300049583 | Bacteria | 11620 |
| 152 | Ga0501067_0028074 | 3300049583 | Bacteria | 3118 |
| 153 | Ga0501070_0000855 | 3300049586 | Bacteria | 27653 |
| 154 | Ga0501070_0011135 | 3300049586 | Bacteria | 7591 |
| 155 | Ga0501070_0017786 | 3300049586 | Bacteria | 5969 |
| 156 | Ga0501070_0029400 | 3300049586 | Bacteria | 4607 |
| 157 | Ga0501070_0065237 | 3300049586 | Bacteria | 3014 |
| 158 | Ga0501071_0000066 | 3300049587 | Bacteria | 37099 |
| 159 | Ga0501071_0030764 | 3300049587 | Bacteria | 3799 |
| 160 | Ga0501073_0000300 | 3300049589 | Bacteria | 32635 |
| 161 | Ga0501073_0036335 | 3300049589 | Bacteria | 3501 |
| 162 | Ga0501080_0023212 | 3300049742 | Bacteria | 5753 |
| 163 | Ga0501080_0067619 | 3300049742 | Bacteria | 3323 |
| 164 | Ga0501035_0019062 | 3300049822 | Bacteria | 6314 |
| 165 | Ga0501044_0004639 | 3300049823 | Bacteria | 15377 |
| 166 | Ga0501044_0108398 | 3300049823 | Bacteria | 2787 |
| 167 | Ga0501045_0056189 | 3300049824 | Bacteria | 2879 |
| 168 | nmdc:mga05p37_1803_c1 | 3300050507 | Bacteria | 24969 |
| 169 | nmdc:mga05p37_28790_c1 | 3300050507 | Bacteria | 6777 |
| 170 | nmdc:mga09592_20203_c1 | 3300050508 | Bacteria | 5473 |
| 171 | nmdc:mga09592_743_c1 | 3300050508 | Bacteria | 25092 |
| 172 | nmdc:mga0qj67_13814_c1 | 3300050509 | Bacteria | 6094 |
| 173 | nmdc:mga0qj67_7057_c1 | 3300050509 | Bacteria | 8286 |
| 174 | nmdc:mga06r32_1134_c1 | 3300050510 | Bacteria | 23909 |
| 175 | nmdc:mga0a205_33550_c1 | 3300050515 | Bacteria | 2904 |
| 176 | nmdc:mga0sz30_8500_c1 | 3300050516 | Bacteria | 3879 |
| 177 | Ga0495601_0009184 | 3300053077 | Bacteria | 5844 |
| 178 | Ga0500556_0000417 | 3300053104 | Bacteria | 30638 |
| 179 | Ga0500593_000728 | 3300053117 | Bacteria | 12465 |
| 180 | Ga0500559_0023569 | 3300053136 | Bacteria | 2613 |
| 181 | Ga0466962_0020006 | 3300061719 | Bacteria | 3217 |
| 182 | 2558908844 | 2558860112 | Bacteria | 9931328 |
| 183 | 2643851002 | 2643221567 | Bacteria | 4163945 |
| 184 | 2644090086 | 2643221615 | Bacteria | 5487866 |
| 185 | 2644134742 | 2643221624 | Bacteria | 4384879 |
| 186 | 2644199011 | 2643221635 | Bacteria | 2632343 |
| 187 | 2644319931 | 2643221657 | Bacteria | 5490246 |
| 188 | 2644444179 | 2643221679 | Bacteria | 3839507 |
| 189 | 2644457849 | 2643221681 | Bacteria | 3707866 |
| 190 | 2644539180 | 2643221697 | Bacteria | 3575694 |
| 191 | 2645719579 | 2643221961 | Bacteria | 3919167 |
| 192 | 2645726477 | 2643221962 | Bacteria | 3874254 |
| 193 | 2812362469 | 2811994880 | Bacteria | 4147780 |
| 194 | 2819428505 | 2818991318 | Bacteria | 5266538 |
| 195 | 2837273401 | 2837268691 | Bacteria | 7850704 |
| 196 | 2868090766 | 2868088558 | Bacteria | 7609351 |
| 197 | 2887446448 | 2887443736 | Bacteria | 4426037 |
| 198 | 2915360356 | 2915358134 | Bacteria | 6050864 |
| 199 | 2964329252 | 2964326757 | Bacteria | 3290868 |
| 200 | Ga0466960_0016450 | |||
| 201 | LJQas_1001642 | |||
| 202 | Ga0070658_10000296 | |||
| 203 | Ga0070658_10000915 | |||
| 204 | Ga0070680_100000235 | |||
| 205 | Ga0070682_100025769 | |||
| 206 | Ga0068868_100004589 | |||
| 207 | Ga0070660_100029590 | |||
| 208 | Ga0070671_100016175 | |||
| 209 | Ga0070659_100000870 | |||
| 210 | Ga0070659_100001345 | |||
| 211 | Ga0070714_100013589 | |||
| 212 | Ga0070713_100009418 | |||
| 213 | Ga0070700_100000171 | |||
| 214 | Ga0070663_100062489 | |||
| 215 | Ga0070681_10000576 | |||
| 216 | Ga0070681_10035832 | |||
| 217 | Ga0070698_100002539 | |||
| 218 | Ga0070699_100011761 | |||
| 219 | Ga0070679_100002819 | |||
| 220 | Ga0070684_100023496 | |||
| 221 | Ga0070684_100031532 | |||
| 222 | Ga0070684_100091925 | |||
| 223 | Ga0070665_100001588 | |||
| 224 | Ga0068859_100105125 | |||
| 225 | Ga0081455_10001177 | |||
| 226 | Ga0081455_10010333 | |||
| 227 | Ga0081538_10000439 | |||
| 228 | Ga0081540_1000596 | |||
| 229 | Ga0081539_10018274 | |||
| 230 | Ga0070717_10003337 | |||
| 231 | Ga0075364_10047697 | |||
| 232 | Ga0075428_100003931 | |||
| 233 | Ga0075428_100032285 | |||
| 234 | Ga0075430_100006502 | |||
| 235 | Ga0075430_100024577 | |||
| 236 | Ga0075431_100001557 | |||
| 237 | Ga0075431_100006583 | |||
| 238 | Ga0075433_10050054 | |||
| 239 | Ga0075429_100002608 | |||
| 240 | Ga0075429_100006990 | |||
| 241 | Ga0097620_100105120 | |||
| 242 | Ga0111539_10008516 | |||
| 243 | Ga0114129_10039370 | |||
| 244 | Ga0114129_10043164 | |||
| 245 | Ga0105242_10091697 | |||
| 246 | Ga0157369_10000069 | |||
| 247 | Ga0157369_10001127 | |||
| 248 | Ga0157369_10012289 | |||
| 249 | Ga0157369_10111197 | |||
| 250 | Ga0157372_10000091 | |||
| 251 | Ga0157376_10011493 | |||
| 252 | Ga0206350_10538963 | |||
| 253 | Ga0206353_10537478 | |||
| 254 | Ga0213875_10003126 | |||
| 255 | Ga0207643_10014624 | |||
| 256 | Ga0207705_10003039 | |||
| 257 | Ga0207705_10007019 | |||
| 258 | Ga0207707_10000500 | |||
| 259 | Ga0207660_10002679 | |||
| 260 | Ga0207657_10004108 | |||
| 261 | Ga0207657_10053515 | |||
| 262 | Ga0207652_10000050 | |||
| 263 | Ga0207652_10013926 | |||
| 264 | Ga0207646_10005990 | |||
| 265 | Ga0207687_10051422 | |||
| 266 | Ga0207700_10050338 | |||
| 267 | Ga0207664_10002131 | |||
| 268 | Ga0207664_10008644 | |||
| 269 | Ga0207664_10046461 | |||
| 270 | Ga0207664_10071139 | |||
| 271 | Ga0207690_10000135 | |||
| 272 | Ga0207711_10077414 | |||
| 273 | Ga0207678_10038094 | |||
| 274 | Ga0207708_10000030 | |||
| 275 | Ga0207674_10054365 | |||
| 276 | Ga0207428_10009913 | |||
| 277 | Ga0268264_10061965 | |||
| 278 | Ga0265334_10016098 | |||
| 279 | Ga0265322_10010501 | |||
| 280 | Ga0265338_10002693 | |||
| 281 | Ga0265332_10027792 | |||
| 282 | Ga0265340_10024699 | |||
| 283 | Ga0265339_10026459 | |||
| 284 | Ga0307513_10004399 | |||
| 285 | Ga0307410_10005986 | |||
| 286 | Ga0307409_100011814 | |||
| 287 | Ga0307409_100032011 | |||
| 288 | Ga0307414_10070813 | |||
| 289 | Ga0307415_100024204 | |||
| 290 | Ga0307415_100056271 | |||
| 291 | Ga0373925_0009645 | |||
| 292 | Ga0436364_0239077 | |||
| 293 | Ga0436364_0617337 | |||
| 294 | Ga0436364_1017454 | |||
| 295 | Ga0395901_0008314 | |||
| 296 | Ga0395901_0019663 | |||
| 297 | Ga0436365_0942952 | |||
| 298 | Ga0451837_0367777 | |||
| 299 | Ga0451843_0396319 | |||
| 300 | Ga0466972_0010589 | |||
| 301 | Ga0466965_0002263 | |||
| 302 | Ga0466965_0046256 | |||
| 303 | Ga0466966_0039398 | |||
| 304 | Ga0466961_0013421 | |||
| 305 | Ga0466961_0014873 | |||
| 306 | Ga0466961_0023254 | |||
| 307 | Ga0466961_0043491 | |||
| 308 | Ga0466963_0060558 | |||
| 309 | Ga0466964_0002712 | |||
| 310 | Ga0466971_0044378 | |||
| 311 | Ga0466970_0006955 | |||
| 312 | Ga0466957_0059566 | |||
| 313 | Ga0466960_0017705 | |||
| 314 | Ga0466958_0019947 | |||
| 315 | Ga0466958_0025494 | |||
| 316 | Ga0466958_0029557 | |||
| 317 | Ga0466958_0048606 | |||
| 318 | Ga0466967_0005008 | |||
| 319 | Ga0466967_0007038 | |||
| 320 | Ga0466967_0015722 | |||
| 321 | Ga0466967_0022111 | |||
| 322 | Ga0466967_0043684 | |||
| 323 | Ga0466967_0045774 | |||
| 324 | Ga0466967_0082893 | |||
| 325 | Ga0466967_0105866 | |||
| 326 | Ga0495652_0087829 | |||
| 327 | Ga0495586_0013265 | |||
| 328 | Ga0495645_0089264 | |||
| 329 | Ga0496102_0000221 | |||
| 330 | Ga0496102_0008999 | |||
| 331 | Ga0496102_0073506 | |||
| 332 | Ga0496102_0093912 | |||
| 333 | Ga0496109_0052597 | |||
| 334 | Ga0496109_0065694 | |||
| 335 | Ga0496109_0104090 | |||
| 336 | Ga0496109_0105516 | |||
| 337 | Ga0496111_0005430 | |||
| 338 | Ga0496111_0045776 | |||
| 339 | Ga0496113_0030148 | |||
| 340 | Ga0496121_0014397 | |||
| 341 | Ga0496122_0000243 | |||
| 342 | Ga0496125_0000015 | |||
| 343 | Ga0496126_0000037 | |||
| 344 | Ga0496126_0040650 | |||
| 345 | Ga0496126_0063567 | |||
| 346 | Ga0501034_0007396 | |||
| 347 | Ga0501036_0060119 | |||
| 348 | Ga0501043_0064943 | |||
| 349 | Ga0501047_0000214 | |||
| 350 | Ga0501067_0001857 | |||
| 351 | Ga0501067_0028074 | |||
| 352 | Ga0501070_0000855 | |||
| 353 | Ga0501070_0011135 | |||
| 354 | Ga0501070_0017786 | |||
| 355 | Ga0501070_0029400 | |||
| 356 | Ga0501070_0065237 | |||
| 357 | Ga0501071_0000066 | |||
| 358 | Ga0501071_0030764 | |||
| 359 | Ga0501073_0000300 | |||
| 360 | Ga0501073_0036335 | |||
| 361 | Ga0501080_0023212 | |||
| 362 | Ga0501080_0067619 | |||
| 363 | Ga0501035_0019062 | |||
| 364 | Ga0501044_0004639 | |||
| 365 | Ga0501044_0108398 | |||
| 366 | Ga0501045_0056189 | |||
| 367 | nmdc:mga05p37_1803_c1 | |||
| 368 | nmdc:mga05p37_28790_c1 | |||
| 369 | nmdc:mga09592_20203_c1 | |||
| 370 | nmdc:mga09592_743_c1 | |||
| 371 | nmdc:mga0qj67_13814_c1 | |||
| 372 | nmdc:mga0qj67_7057_c1 | |||
| 373 | nmdc:mga06r32_1134_c1 | |||
| 374 | nmdc:mga0a205_33550_c1 | |||
| 375 | nmdc:mga0sz30_8500_c1 | |||
| 376 | Ga0495601_0009184 | |||
| 377 | Ga0500556_0000417 | |||
| 378 | Ga0500593_000728 | |||
| 379 | Ga0500559_0023569 | |||
| 380 | Ga0466962_0020006 | |||
| 381 | 2558908844 | |||
| 382 | 2643851002 | |||
| 383 | 2644090086 | |||
| 384 | 2644134742 | |||
| 385 | 2644199011 | |||
| 386 | 2644319931 | |||
| 387 | 2644444179 | |||
| 388 | 2644457849 | |||
| 389 | 2644539180 | |||
| 390 | 2645719579 | |||
| 391 | 2645726477 | |||
| 392 | 2812362469 | |||
| 393 | 2819428505 | |||
| 394 | 2837273401 | |||
| 395 | 2868090766 | |||
| 396 | 2887446448 | |||
| 397 | 2915360356 | |||
| 398 | 2964329252 |
Family Sequences
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 2yjt-assembly1.cif.gz_D | crystal structure of e. coli dead-box protein srmb bound to regulator of ribonuclease activity a (rraa) | 0.8685 | 467 | 605 |
| 3eas-assembly1.cif.gz_B | novel dimerization motif in the dead box rna helicase hera: form 1, complete dimer, asymmetric | 0.8423 | 468 | 607 |
| 2hjv-assembly2.cif.gz_B | structure of the second domain (residues 207-368) of the bacillus subtilis yxin protein | 0.8157 | 467 | 607 |
| 2wax-assembly2.cif.gz_C | structure of the human ddx6 c-terminal domain in complex with an edc3- fdf peptide | 0.8148 | 466 | 607 |
| 6s8s-assembly1.cif.gz_A | extended structure of the human ddx6 c-terminal domain in complex with an edc3 fdf peptide | 0.8087 | 463 | 607 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| af_A0A1D6PA70_1207_1366_3.40.50.300 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases | 0.8991 | 472 | 579 | 3.40.50.300 |
| af_A0A1D8PTJ0_926_1094_3.40.50.300 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases | 0.8902 | 470 | 615 | 3.40.50.300 |
| af_A0A2R8PVA3_1448_1613_3.40.50.300 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases | 0.885 | 467 | 607 | 3.40.50.300 |
| af_Q4CLU5_2_114_3.40.50.300 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases | 0.8807 | 501 | 611 | 3.40.50.300 |
| af_F4I7D2_1114_1266_3.40.50.300 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases | 0.8783 | 483 | 622 | 3.40.50.300 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A6B2LM10-F1-model_v4 | Helicase C-terminal domain-containing protein | 0.9427 | 483 | 596 |
GO:0005524
GO:0005634 GO:0006281 GO:0008094 GO:0016787 |
| AF-A0A423VQF4-F1-model_v4 | Helicase C-terminal domain-containing protein | 0.9355 | 466 | 599 |
GO:0005524
GO:0005634 GO:0006281 GO:0008094 GO:0016787 |
| AF-A0A6G1RZU1-F1-model_v4 | ERCC excision repair 6 like, spindle assembly checkpoint helicase | 0.9138 | 469 | 611 |
GO:0004386
GO:0005524 GO:0015616 GO:0016787 |
| AF-U2SXY6-F1-model_v4 | Helicase protein | 0.9121 | 401 | 639 |
GO:0004386
GO:0005524 GO:0006281 GO:0016787 GO:0031297 |
| AF-J5K9Z5-F1-model_v4 | deleted | 0.9117 | 483 | 614 |
|