F305539

General Info

Members Datasets Scaffolds Average Seq Length
199 144 191 564

Family's Representative Sequence

Representative Sequence 3300005543|Ga0070672_100047881|Ga0070672_1000478813
Length 611
Sequence MTEAPPEREATAGGAWLAAAACTAIALPPLIAFNVPPSATFFNQAVAFVGWGCFLIVVGVWIPKQAWPRSAGALSLLSAMGLLFVAALAATPFAHVPGSLSLSSAGTIASAILAIAVGASVARAGLSEAIFRAFCIGMVVAGIASSAVGLVQVFAPSLPDGNWVALSSIPGRATGNLRQPNHLSSLLIWSIVAAIWMGETRAWRRAVTIGLALVFIYVIVLTASRTGAVGMLTLAAWGLLDRRLSRSARLLLVLAPLLYLAMWWGTSAWATLSHQTFGGQTRFATEGDVSNARFPVWANTLAIVATHPWWGVGFGDFNFAWTLTPFPGRPVAFFDHTHNIILNFAVELGLPLAALVLALMLHALWRAFGNANRAGADRPGSVSIQRAALVMVIAAAVHSMFEYPLWYAYFLLPTAFAFGLCLERPALSDELARAGTEEPGTVTRPYVIAAMFLILGGTLAVYDYMRVVVIFAPPAGAAALEQRIAEGRRSILFGHHADYAAATVAAHPGKVMESFERSPHYLLDARLMIAWAKALDEQGEIDKARHLAARLREFHNEQADEFFAACASSGTPPGIASIGATEAAVAPAVAASAVPFQCLAPTRTLRFEDFR

Samples

Sample ID Description Type Environment
1 2585428057 Methylibium sp. YR605 Isolate Rhizosphere
2 2585428058 Methylibium sp. CF468 Isolate Rhizosphere
3 2588253510 Rhizobacter sp. OV335 Isolate Rhizosphere
4 2643221592 Rhizobacter sp. Root16D2 Isolate Unclassified
5 2643221625 Rhizobacter sp. Root29 Isolate Unclassified
6 2643221644 Rhizobacter sp. Root1221 Isolate Unclassified
7 2643221648 Rhizobacter sp. Root1238 Isolate Unclassified
8 2643221654 Rhizobacter sp. Root404 Isolate Unclassified
9 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
10 3300002705 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS Metagenome Unclassified
11 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
12 3300002741 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL Metagenome Unclassified
13 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
14 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
15 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
16 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
17 3300003752 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 Metagenome Endosphere
18 3300003756 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 Metagenome Endosphere
19 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
20 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
21 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
22 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
23 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
24 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
25 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
26 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
27 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
28 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
29 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
30 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
31 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
32 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
33 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
34 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
35 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
36 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
37 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
38 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
39 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
40 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
41 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
42 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
43 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
44 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
45 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
46 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
47 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
48 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
49 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
50 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
51 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
52 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
53 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
54 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
55 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
56 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
57 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
58 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
59 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
60 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
61 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
62 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
63 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
64 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
65 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
66 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
67 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
68 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
69 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
70 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
71 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
93 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
95 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
96 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
97 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
98 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
99 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
100 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
101 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
102 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
103 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
104 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
105 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
106 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
107 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
108 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
109 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
110 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
111 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
112 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
113 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
114 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
115 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
116 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
117 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
118 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
119 3300042121 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0515D_E14_082716_2398 Metagenome Rhizosphere
120 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
121 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
122 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
123 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
124 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
125 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
126 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
127 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
128 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
129 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
130 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
131 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
132 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
133 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
134 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
135 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
136 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
137 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
138 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
139 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
140 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
141 3300053154 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 endosphere Metagenome Endosphere
142 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
143 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
144 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 95.98
Metatranscriptomes 0
Isolates 4.02

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 24.12
Nodule 1.01
Rhizoplane 0
Rhizosphere 55.28
Stem 0
Stem Tuber 0
Unclassified 19.6

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24740J21852_10005501 3300001979 Bacteria 5347
2 JGI25156J39149_1000400 3300002705 Bacteria 27216
3 JGI25154J39366_1001071 3300002738 Bacteria 10780
4 JGI25157J39369_1000026 3300002741 Bacteria 148982
5 JGI25157J39369_1000361 3300002741 Bacteria 31616
6 JGI25153J46596_10002824 3300003215 Bacteria 9869
7 rootH2_10043635 3300003320 Bacteria 3200
8 rootL2_10097199 3300003322 Bacteria 4777
9 rootH1_10081903 3300003323 Bacteria 5307
10 Ga0055539_1000262 3300003752 Bacteria 32968
11 Ga0055539_1000423 3300003752 Bacteria 15411
12 Ga0055533_1000048 3300003756 Bacteria 212106
13 Ga0055525_1000053 3300003759 Bacteria 218067
14 Ga0055535_1002811 3300003761 Bacteria 5530
15 Ga0055529_1000461 3300003763 Bacteria 39448
16 Ga0055524_1000137 3300003775 Bacteria 87107
17 Ga0055530_10011130 3300003791 Bacteria 3258
18 Ga0055540_1000042 3300003792 Bacteria 156410
19 Ga0065165_1004832 3300005262 Bacteria 8013
20 Ga0070680_100019306 3300005336 Bacteria 5402
21 Ga0070661_100000143 3300005344 Bacteria 58391
22 Ga0070659_100014527 3300005366 Bacteria 5884
23 Ga0070667_100023498 3300005367 Bacteria 5115
24 Ga0068867_100000036 3300005459 Bacteria 81113
25 Ga0068867_100013839 3300005459 Bacteria 5711
26 Ga0070672_100047881 3300005543 Bacteria 3319
27 Ga0070672_100051793 3300005543 Bacteria 3203
28 Ga0070672_100071037 3300005543 Bacteria 2768
29 Ga0070665_100071047 3300005548 Bacteria 3487
30 Ga0068855_100008697 3300005563 Bacteria 12273
31 Ga0068855_100024372 3300005563 Bacteria 7240
32 Ga0068855_100068896 3300005563 Bacteria 4118
33 Ga0070664_100004592 3300005564 Bacteria 11079
34 Ga0068857_100001696 3300005577 Bacteria 17710
35 Ga0068854_100008189 3300005578 Bacteria 6706
36 Ga0068856_100004635 3300005614 Bacteria 13656
37 Ga0068852_100006528 3300005616 Bacteria 8436
38 Ga0068852_100136228 3300005616 Bacteria 2267
39 Ga0068863_100083808 3300005841 Bacteria 3021
40 Ga0068858_100138734 3300005842 Bacteria 2282
41 Ga0075362_10024758 3300006177 Bacteria 2549
42 Ga0075370_10001490 3300006353 Bacteria 10202
43 Ga0075370_10028502 3300006353 Bacteria 3104
44 Ga0079104_1000012 3300006946 Bacteria 355143
45 Ga0105240_10003736 3300009093 Bacteria 23512
46 Ga0105240_10020496 3300009093 Bacteria 8816
47 Ga0105243_10000517 3300009148 Bacteria 39338
48 Ga0105242_10072454 3300009176 Bacteria 2861
49 Ga0105242_10089093 3300009176 Bacteria 2593
50 Ga0105248_10071201 3300009177 Bacteria 3905
51 Ga0105237_10167497 3300009545 Bacteria 2196
52 Ga0105238_10013762 3300009551 Bacteria 8177
53 Ga0105239_10024170 3300010375 Bacteria 6692
54 Ga0157374_10018354 3300013296 Bacteria 6172
55 Ga0157375_10045911 3300013308 Bacteria 4255
56 Ga0157377_10000010 3300014745 Bacteria 380929
57 Ga0163161_10036719 3300017792 Bacteria 3510
58 Ga0213872_10000211 3300021361 Bacteria 51730
59 Ga0213872_10009080 3300021361 Bacteria 4781
60 Ga0209674_100024 3300025226 Bacteria 535481
61 Ga0209563_100014 3300025230 Bacteria 940582
62 Ga0209563_100121 3300025230 Bacteria 130625
63 Ga0207427_101249 3300025231 Bacteria 9752
64 Ga0209258_100180 3300025242 Bacteria 137306
65 Ga0209258_100607 3300025242 Bacteria 29004
66 Ga0209646_1000012 3300025246 Bacteria 573300
67 Ga0209026_1000004 3300025250 Bacteria 949012
68 Ga0209677_100139 3300025253 Bacteria 67508
69 Ga0209677_100181 3300025253 Bacteria 53044
70 Ga0209759_1000003 3300025256 Bacteria 792130
71 Ga0209759_1001085 3300025256 Bacteria 17718
72 Ga0209759_1004167 3300025256 Bacteria 5496
73 Ga0209455_1000144 3300025272 Bacteria 137313
74 Ga0209673_1002895 3300025273 Bacteria 10884
75 Ga0209758_1000869 3300025297 Bacteria 41584
76 Ga0209050_1000600 3300025298 Bacteria 57329
77 Ga0209050_1001332 3300025298 Bacteria 27505
78 Ga0209050_1004856 3300025298 Bacteria 8821
79 Ga0209256_1000030 3300025299 Bacteria 414828
80 Ga0209051_1000004 3300025303 Bacteria 1155596
81 Ga0209051_1006546 3300025303 Bacteria 6542
82 Ga0209051_1007251 3300025303 Bacteria 6093
83 Ga0209051_1020048 3300025303 Bacteria 2897
84 Ga0209257_1000063 3300025304 Bacteria 359089
85 Ga0207682_10011684 3300025893 Bacteria 3432
86 Ga0207645_10006473 3300025907 Bacteria 8400
87 Ga0207645_10031542 3300025907 Bacteria 3409
88 Ga0207645_10035290 3300025907 Bacteria 3211
89 Ga0207695_10003017 3300025913 Bacteria 24188
90 Ga0207695_10012728 3300025913 Bacteria 10074
91 Ga0207649_10001093 3300025920 Bacteria 16500
92 Ga0207649_10082356 3300025920 Bacteria 2086
93 Ga0207650_10036426 3300025925 Bacteria 3580
94 Ga0207644_10092475 3300025931 Bacteria 2257
95 Ga0207690_10001592 3300025932 Bacteria 14162
96 Ga0207709_10000637 3300025935 Bacteria 28612
97 Ga0207691_10023617 3300025940 Bacteria 5790
98 Ga0207691_10041398 3300025940 Bacteria 4254
99 Ga0207691_10150369 3300025940 Bacteria 2047
100 Ga0207689_10072866 3300025942 Bacteria 2822
101 Ga0207679_10000107 3300025945 Bacteria 68403
102 Ga0207667_10001630 3300025949 Bacteria 28251
103 Ga0207667_10019799 3300025949 Bacteria 7501
104 Ga0207667_10053130 3300025949 Bacteria 4264
105 Ga0207640_10006776 3300025981 Bacteria 6303
106 Ga0207677_10045154 3300026023 Bacteria 2941
107 Ga0207703_10033322 3300026035 Bacteria 4082
108 Ga0207702_10000033 3300026078 Bacteria 166621
109 Ga0207702_10000039 3300026078 Bacteria 152825
110 Ga0207702_10000058 3300026078 Bacteria 130860
111 Ga0207648_10000037 3300026089 Bacteria 120856
112 Ga0207648_10013124 3300026089 Bacteria 7724
113 Ga0207648_10045613 3300026089 Bacteria 3844
114 Ga0207648_10088160 3300026089 Bacteria 2709
115 Ga0207674_10002981 3300026116 Bacteria 21000
116 Ga0207675_100015548 3300026118 Bacteria 7098
117 Ga0207683_10099358 3300026121 Bacteria 2597
118 Ga0207698_10007293 3300026142 Bacteria 6927
119 Ga0209281_1000039 3300027111 Bacteria 355150
120 Ga0268266_10080364 3300028379 Bacteria 2840
121 Ga0265336_10000030 3300028666 Bacteria 169335
122 Ga0307517_10006825 3300028786 Bacteria 16789
123 Ga0307517_10049073 3300028786 Bacteria 4327
124 Ga0307515_10024658 3300028794 Bacteria 10463
125 Ga0265324_10001179 3300029957 Bacteria 15574
126 Ga0307512_10096866 3300030522 Bacteria 2021
127 Ga0265327_10000020 3300031251 Bacteria 424552
128 Ga0307513_10018802 3300031456 Bacteria 8247
129 Ga0307513_10093681 3300031456 Bacteria 3052
130 Ga0307509_10000135 3300031507 Bacteria 109066
131 Ga0307509_10004212 3300031507 Bacteria 20986
132 Ga0307509_10021055 3300031507 Bacteria 7384
133 Ga0307509_10145376 3300031507 Bacteria 2298
134 Ga0307508_10000048 3300031616 Bacteria 137587
135 Ga0307508_10003526 3300031616 Bacteria 15770
136 Ga0307508_10016282 3300031616 Bacteria 6767
137 Ga0307508_10021831 3300031616 Bacteria 5825
138 Ga0307514_10000567 3300031649 Bacteria 70155
139 Ga0307514_10025403 3300031649 Bacteria 4792
140 Ga0307516_10000942 3300031730 Bacteria 40129
141 Ga0307516_10014488 3300031730 Bacteria 8338
142 Ga0307405_10011570 3300031731 Bacteria 4633
143 Ga0307407_10045754 3300031903 Bacteria 2475
144 Ga0307409_100000263 3300031995 Bacteria 21269
145 Ga0307416_100000999 3300032002 Bacteria 14988
146 Ga0307416_100018000 3300032002 Bacteria 4963
147 Ga0307414_10041415 3300032004 Bacteria 3120
148 Ga0307411_10005140 3300032005 Bacteria 6390
149 Ga0307415_100026932 3300032126 Bacteria 3634
150 Ga0307510_10000773 3300033180 Bacteria 33035
151 Ga0307510_10050261 3300033180 Bacteria 4425
152 Ga0307510_10056503 3300033180 Bacteria 4086
153 Ga0373925_0124303 3300037068 Bacteria 2006
154 Ga0395898_0052735 3300037466 Bacteria 3973
155 Ga0395905_0001436 3300037471 Bacteria 28673
156 Ga0395905_0022128 3300037471 Bacteria 6014
157 Ga0436365_0930558 3300039437 Bacteria 3839
158 Ga0436361_0036820 3300039447 Bacteria 3671
159 Ga0436361_0057254 3300039447 Bacteria 8651
160 Ga0436361_0375126 3300039447 Bacteria 6144
161 Ga0439431_0004751 3300041997 Bacteria 2990
162 Ga0450919_001678 3300042121 Bacteria 2898
163 Ga0451577_0001207 3300042876 Bacteria 36165
164 Ga0466965_0015972 3300044683 Bacteria 3567
165 Ga0466965_0021058 3300044683 Bacteria 3138
166 Ga0466966_0005719 3300044684 Bacteria 8185
167 Ga0466971_0000925 3300044719 Bacteria 12051
168 Ga0466957_0004693 3300044842 Bacteria 7645
169 Ga0466959_0014170 3300045049 Bacteria 5787
170 Ga0451576_0044525 3300045051 Bacteria 4679
171 Ga0466958_0029855 3300045836 Bacteria 3235
172 Ga0495592_0000202 3300046454 Bacteria 50799
173 Ga0495638_0016960 3300046460 Bacteria 4869
174 Ga0495632_0000765 3300046519 Bacteria 28845
175 Ga0495686_0002158 3300047472 Bacteria 19203
176 Ga0495686_0004345 3300047472 Bacteria 11705
177 nmdc:mga0k408_7993_c1 3300050493 Bacteria 5671
178 nmdc:mga07m45_11782_c1 3300050496 Bacteria 4602
179 nmdc:mga07m45_15656_c1 3300050496 Bacteria 4050
180 nmdc:mga07m45_7038_c1 3300050496 Bacteria 4335
181 Ga0500635_0000156 3300053080 Bacteria 37824
182 Ga0500578_0000900 3300053086 Bacteria 33675
183 Ga0500651_0051716 3300053093 Bacteria 2577
184 Ga0500593_002251 3300053117 Bacteria 7048
185 Ga0500594_0000955 3300053118 Bacteria 6227
186 Ga0500559_0000207 3300053136 Bacteria 46949
187 Ga0500568_0034890 3300053139 Bacteria 2055
188 Ga0500619_012649 3300053154 Bacteria 2213
189 Ga0500622_0001916 3300053156 Bacteria 15694
190 Ga0500645_001219 3300053730 Bacteria 13584
191 Ga0466962_0000571 3300061719 Bacteria 16184

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300026142 Ga0207698_10007293 Ga0207698_100072937 401
2 3300053730 Ga0500645_001219 Ga0500645_001219_10525_12048 462
3 3300039437 Ga0436365_0930558 Ga0436365_0930558_2141_3820 473
4 3300031616 Ga0307508_10003526 Ga0307508_100035264 480
5 3300028786 Ga0307517_10049073 Ga0307517_100490733 484
6 3300031456 Ga0307513_10018802 Ga0307513_100188023 487
7 3300031507 Ga0307509_10004212 Ga0307509_1000421214 494
8 3300031730 Ga0307516_10000942 Ga0307516_1000094221 496
9 3300005578 Ga0068854_100008189 Ga0068854_1000081896 497
10 3300025981 Ga0207640_10006776 Ga0207640_100067762 497
11 3300041997 Ga0439431_0004751 Ga0439431_0004751_334_2139 500
12 3300025920 Ga0207649_10082356 Ga0207649_100823562 501
13 3300053080 Ga0500635_0000156 Ga0500635_0000156_21391_23175 501
14 3300005616 Ga0068852_100006528 Ga0068852_1000065285 502
15 3300006946 Ga0079104_1000012 Ga0079104_1000012100 502
16 3300027111 Ga0209281_1000039 Ga0209281_1000039226 502
17 3300031507 Ga0307509_10145376 Ga0307509_101453762 502
18 3300037068 Ga0373925_0124303 Ga0373925_0124303_73_1794 502
19 3300042121 Ga0450919_001678 Ga0450919_001678_35_1669 502
20 3300046454 Ga0495592_0000202 Ga0495592_0000202_1894_3528 502
21 3300053154 Ga0500619_012649 Ga0500619_012649_390_2024 502
22 3300044683 Ga0466965_0021058 Ga0466965_0021058_500_2197 503
23 3300025893 Ga0207682_10011684 Ga0207682_100116843 504
24 3300025931 Ga0207644_10092475 Ga0207644_100924752 504
25 3300026089 Ga0207648_10045613 Ga0207648_100456132 505
26 3300031616 Ga0307508_10000048 Ga0307508_1000004856 507
27 3300006353 Ga0075370_10028502 Ga0075370_100285023 508
28 3300050496 nmdc:mga07m45_7038_c1 nmdc:mga07m45_7038_c1_1321_3066 508
29 3300026121 Ga0207683_10099358 Ga0207683_100993582 509
30 3300026089 Ga0207648_10088160 Ga0207648_100881602 512
31 3300053139 Ga0500568_0034890 Ga0500568_0034890_423_2039 512
32 3300005344 Ga0070661_100000143 Ga0070661_10000014329 514
33 3300005564 Ga0070664_100004592 Ga0070664_1000045922 514
34 3300025920 Ga0207649_10001093 Ga0207649_1000109316 514
35 3300025932 Ga0207690_10001592 Ga0207690_100015924 514
36 3300025945 Ga0207679_10000107 Ga0207679_1000010731 514
37 3300033180 Ga0307510_10000773 Ga0307510_1000077315 514
38 3300005336 Ga0070680_100019306 Ga0070680_1000193064 515
39 3300009176 Ga0105242_10089093 Ga0105242_100890932 515
40 3300031616 Ga0307508_10016282 Ga0307508_100162823 515
41 3300009545 Ga0105237_10167497 Ga0105237_101674972 516
42 3300026118 Ga0207675_100015548 Ga0207675_1000155482 517
43 iso_pu_bacteria 2588253510 2588292030 517
44 3300025907 Ga0207645_10035290 Ga0207645_100352903 520
45 3300053118 Ga0500594_0000955 Ga0500594_0000955_373_2061 520
46 3300053136 Ga0500559_0000207 Ga0500559_0000207_22325_24013 520
47 3300053156 Ga0500622_0001916 Ga0500622_0001916_963_2651 520
48 3300017792 Ga0163161_10036719 Ga0163161_100367193 521
49 3300025907 Ga0207645_10006473 Ga0207645_100064734 522
50 3300003791 Ga0055530_10011130 Ga0055530_100111302 523
51 3300005841 Ga0068863_100083808 Ga0068863_1000838082 523
52 3300005842 Ga0068858_100138734 Ga0068858_1001387342 523
53 3300025298 Ga0209050_1000600 Ga0209050_100060019 523
54 3300025303 Ga0209051_1020048 Ga0209051_10200481 523
55 3300026035 Ga0207703_10033322 Ga0207703_100333222 523
56 3300025942 Ga0207689_10072866 Ga0207689_100728662 524
57 3300026089 Ga0207648_10013124 Ga0207648_100131244 524
58 3300032002 Ga0307416_100000999 Ga0307416_1000009994 526
59 3300025940 Ga0207691_10150369 Ga0207691_101503691 527
60 3300031995 Ga0307409_100000263 Ga0307409_10000026317 527
61 3300031649 Ga0307514_10025403 Ga0307514_100254033 528
62 3300021361 Ga0213872_10000211 Ga0213872_1000021146 529
63 3300030522 Ga0307512_10096866 Ga0307512_100968662 529
64 3300031251 Ga0265327_10000020 Ga0265327_1000002040 529
65 3300031616 Ga0307508_10021831 Ga0307508_100218314 529
66 3300039447 Ga0436361_0057254 Ga0436361_0057254_6909_8639 529
67 3300045051 Ga0451576_0044525 Ga0451576_0044525_2042_3778 529
68 3300025303 Ga0209051_1006546 Ga0209051_10065465 530
69 3300028786 Ga0307517_10006825 Ga0307517_100068254 531
70 3300033180 Ga0307510_10050261 Ga0307510_100502613 531
71 3300042876 Ga0451577_0001207 Ga0451577_0001207_6446_8191 531
72 iso_pu_bacteria 2643221654 2644305542 531
73 3300026023 Ga0207677_10045154 Ga0207677_100451542 532
74 3300028794 Ga0307515_10024658 Ga0307515_100246586 532
75 3300047472 Ga0495686_0002158 Ga0495686_0002158_9957_11714 532
76 3300031649 Ga0307514_10000567 Ga0307514_1000056768 533
77 3300003320 rootH2_10043635 rootH2_100436351 536
78 3300037466 Ga0395898_0052735 Ga0395898_0052735_575_2392 536
79 3300031507 Ga0307509_10000135 Ga0307509_100001354 538
80 3300003215 JGI25153J46596_10002824 JGI25153J46596_100028243 539
81 3300025297 Ga0209758_1000869 Ga0209758_100086913 539
82 3300050493 nmdc:mga0k408_7993_c1 nmdc:mga0k408_7993_c1_3387_5165 539
83 3300005548 Ga0070665_100071047 Ga0070665_1000710473 541
84 3300005563 Ga0068855_100008697 Ga0068855_1000086974 541
85 3300025949 Ga0207667_10001630 Ga0207667_1000163013 541
86 3300028379 Ga0268266_10080364 Ga0268266_100803642 541
87 3300032005 Ga0307411_10005140 Ga0307411_100051405 541
88 3300002741 JGI25157J39369_1000026 JGI25157J39369_100002621 542
89 3300002741 JGI25157J39369_1000361 JGI25157J39369_10003616 542
90 3300005543 Ga0070672_100051793 Ga0070672_1000517933 542
91 3300009093 Ga0105240_10003736 Ga0105240_100037365 543
92 3300025913 Ga0207695_10003017 Ga0207695_1000301716 543
93 3300033180 Ga0307510_10056503 Ga0307510_100565033 543
94 3300037471 Ga0395905_0022128 Ga0395905_0022128_2890_4779 545
95 3300003761 Ga0055535_1002811 Ga0055535_10028112 546
96 3300003763 Ga0055529_1000461 Ga0055529_100046128 546
97 3300013296 Ga0157374_10018354 Ga0157374_100183548 546
98 3300025242 Ga0209258_100180 Ga0209258_10018030 546
99 3300025256 Ga0209759_1004167 Ga0209759_10041672 546
100 3300025272 Ga0209455_1000144 Ga0209455_100014430 546
101 3300025925 Ga0207650_10036426 Ga0207650_100364263 546
102 3300046460 Ga0495638_0016960 Ga0495638_0016960_1723_3477 546
103 3300053093 Ga0500651_0051716 Ga0500651_0051716_98_1852 546
104 3300005543 Ga0070672_100071037 Ga0070672_1000710371 548
105 3300025940 Ga0207691_10041398 Ga0207691_100413983 548
106 3300028666 Ga0265336_10000030 Ga0265336_10000030154 548
107 3300029957 Ga0265324_10001179 Ga0265324_100011792 548
108 3300037471 Ga0395905_0001436 Ga0395905_0001436_18744_20561 548
109 3300003322 rootL2_10097199 rootL2_100971992 549
110 3300009176 Ga0105242_10072454 Ga0105242_100724542 549
111 3300031456 Ga0307513_10093681 Ga0307513_100936813 549
112 3300003323 rootH1_10081903 rootH1_100819032 550
113 3300039447 Ga0436361_0036820 Ga0436361_0036820_623_2350 550
114 3300021361 Ga0213872_10009080 Ga0213872_100090803 551
115 3300031730 Ga0307516_10014488 Ga0307516_100144887 551
116 3300031731 Ga0307405_10011570 Ga0307405_100115703 551
117 3300031903 Ga0307407_10045754 Ga0307407_100457542 551
118 3300032002 Ga0307416_100018000 Ga0307416_1000180004 551
119 3300032004 Ga0307414_10041415 Ga0307414_100414153 551
120 3300039447 Ga0436361_0375126 Ga0436361_0375126_2693_4423 551
121 3300003759 Ga0055525_1000053 Ga0055525_100005386 552
122 3300025230 Ga0209563_100014 Ga0209563_100014748 552
123 3300045049 Ga0466959_0014170 Ga0466959_0014170_610_2421 553
124 3300003752 Ga0055539_1000262 Ga0055539_100026214 554
125 3300003756 Ga0055533_1000048 Ga0055533_100004898 554
126 3300005262 Ga0065165_1004832 Ga0065165_10048323 554
127 3300005616 Ga0068852_100136228 Ga0068852_1001362282 554
128 3300025226 Ga0209674_100024 Ga0209674_100024395 554
129 3300025230 Ga0209563_100121 Ga0209563_10012191 554
130 3300025253 Ga0209677_100139 Ga0209677_10013940 554
131 3300025273 Ga0209673_1002895 Ga0209673_10028955 554
132 3300025907 Ga0207645_10031542 Ga0207645_100315421 554
133 3300044683 Ga0466965_0015972 Ga0466965_0015972_1592_3406 554
134 3300044684 Ga0466966_0005719 Ga0466966_0005719_2093_3907 554
135 3300044719 Ga0466971_0000925 Ga0466971_0000925_7381_9195 554
136 3300044842 Ga0466957_0004693 Ga0466957_0004693_5757_7571 554
137 3300045836 Ga0466958_0029855 Ga0466958_0029855_1069_2883 554
138 3300053086 Ga0500578_0000900 Ga0500578_0000900_13055_14833 554
139 3300061719 Ga0466962_0000571 Ga0466962_0000571_14148_15962 554
140 3300005367 Ga0070667_100023498 Ga0070667_1000234985 555
141 3300006177 Ga0075362_10024758 Ga0075362_100247582 555
142 3300006353 Ga0075370_10001490 Ga0075370_100014904 555
143 3300009093 Ga0105240_10020496 Ga0105240_100204966 555
144 3300025231 Ga0207427_101249 Ga0207427_1012493 555
145 3300025242 Ga0209258_100607 Ga0209258_10060714 555
146 3300025913 Ga0207695_10012728 Ga0207695_100127288 555
147 3300050496 nmdc:mga07m45_11782_c1 nmdc:mga07m45_11782_c1_213_1988 555
148 3300050496 nmdc:mga07m45_15656_c1 nmdc:mga07m45_15656_c1_2000_3778 555
149 3300003792 Ga0055540_1000042 Ga0055540_100004281 556
150 3300025298 Ga0209050_1001332 Ga0209050_100133214 556
151 3300025303 Ga0209051_1000004 Ga0209051_1000004673 556
152 3300025304 Ga0209257_1000063 Ga0209257_1000063159 556
153 3300002705 JGI25156J39149_1000400 JGI25156J39149_10004006 558
154 3300002738 JGI25154J39366_1001071 JGI25154J39366_10010717 558
155 3300003752 Ga0055539_1000423 Ga0055539_10004239 558
156 3300005459 Ga0068867_100000036 Ga0068867_10000003646 558
157 3300005563 Ga0068855_100024372 Ga0068855_1000243723 558
158 3300005577 Ga0068857_100001696 Ga0068857_10000169613 558
159 3300005614 Ga0068856_100004635 Ga0068856_10000463512 558
160 3300009148 Ga0105243_10000517 Ga0105243_1000051712 558
161 3300009551 Ga0105238_10013762 Ga0105238_100137624 558
162 3300010375 Ga0105239_10024170 Ga0105239_100241704 558
163 3300014745 Ga0157377_10000010 Ga0157377_1000001020 558
164 3300025246 Ga0209646_1000012 Ga0209646_1000012111 558
165 3300025250 Ga0209026_1000004 Ga0209026_1000004505 558
166 3300025253 Ga0209677_100181 Ga0209677_10018118 558
167 3300025256 Ga0209759_1000003 Ga0209759_1000003219 558
168 3300025303 Ga0209051_1007251 Ga0209051_10072513 558
169 3300025935 Ga0207709_10000637 Ga0207709_1000063717 558
170 3300025949 Ga0207667_10019799 Ga0207667_100197994 558
171 3300026078 Ga0207702_10000033 Ga0207702_1000003332 558
172 3300026078 Ga0207702_10000039 Ga0207702_10000039116 558
173 3300026078 Ga0207702_10000058 Ga0207702_1000005897 558
174 3300026089 Ga0207648_10000037 Ga0207648_1000003746 558
175 3300026116 Ga0207674_10002981 Ga0207674_1000298117 558
176 3300003775 Ga0055524_1000137 Ga0055524_100013744 560
177 3300005459 Ga0068867_100013839 Ga0068867_1000138392 560
178 3300025298 Ga0209050_1004856 Ga0209050_10048568 560
179 3300025299 Ga0209256_1000030 Ga0209256_1000030253 560
180 3300032126 Ga0307415_100026932 Ga0307415_1000269322 560
181 3300005366 Ga0070659_100014527 Ga0070659_1000145273 561
182 3300025256 Ga0209759_1001085 Ga0209759_100108511 561
183 3300047472 Ga0495686_0004345 Ga0495686_0004345_8132_9931 561
184 iso_pu_bacteria 2643221592 2643971177 561
185 iso_pu_bacteria 2643221625 2644142873 561
186 iso_pu_bacteria 2643221648 2644273826 561
187 3300013308 Ga0157375_10045911 Ga0157375_100459112 563
188 3300031507 Ga0307509_10021055 Ga0307509_100210556 563
189 3300046519 Ga0495632_0000765 Ga0495632_0000765_11941_13716 564
190 iso_pu_bacteria 2585428057 2587728675 564
191 iso_pu_bacteria 2585428058 2587732348 564
192 iso_pu_bacteria 2643221644 2644246148 564
193 3300005563 Ga0068855_100068896 Ga0068855_1000688963 566
194 3300025949 Ga0207667_10053130 Ga0207667_100531303 566
195 3300005543 Ga0070672_100047881 Ga0070672_1000478813 568
196 3300009177 Ga0105248_10071201 Ga0105248_100712012 568
197 3300025940 Ga0207691_10023617 Ga0207691_100236174 568
198 3300053117 Ga0500593_002251 Ga0500593_002251_2277_4073 572
199 3300001979 JGI24740J21852_10005501 JGI24740J21852_100055013 595

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF15864

PglL_A

Protein glycosylation ligase

173

197

0.96

PF11846

Wzy_C_2

Virulence factor membrane-bound polymerase, C-terminal

386

567

0.77

PF04932

Wzy_C

O-Antigen ligase

209

357

0.75

Structural Annotation

Top 5 Hits

ID Description Score Start End
3esk-assembly1.cif.gz_A structure of hop tpr2a domain in complex with the non-cognate hsc70 peptide ligand 0.5964 495 567
7tpj-assembly1.cif.gz_B single-particle cryo-em structure of the waal o-antigen ligase in its apo state 0.5594 24 421
7tpj-assembly1.cif.gz_B single-particle cryo-em structure of the waal o-antigen ligase in its apo state 0.5507 24 421
8bh1-assembly1.cif.gz_A core divisome complex ftswiqbl from pseudomonas aeruginosa 0.4185 82 418
8bh1-assembly1.cif.gz_A core divisome complex ftswiqbl from pseudomonas aeruginosa 0.4049 82 418
ID Description Score Start End Superfamily
5jj6B01 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.6172 495 562 1.25.40.10
af_Q8BGZ4_328_538_1.25.40.10 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.5324 441 567 1.25.40.10
af_I1J544_78_166_1.25.40.10 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.5287 463 564 1.25.40.10
af_A0A2R8PVS9_85_235_1.25.40.430 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat; 0.501 462 564 1.25.40.430
af_Q9Z1S0_2_194_1.25.40.430 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat; 0.4899 459 564 1.25.40.430
ID Description Score Start End GO Terms
AF-A0A2U8FMY5-F1-model_v4 Polymerase 0.8744 3 595 GO:0016020
AF-A0A2S5SVH3-F1-model_v4 Polymerase 0.8721 29 595 GO:0016020
AF-A0A4V3CTR0-F1-model_v4 O-antigen ligase 0.8713 40 594 GO:0016020
GO:0016874
AF-A0A2U8FMY5-F1-model_v4 Polymerase 0.8702 3 595 GO:0016020
AF-A0A2S5SVH3-F1-model_v4 Polymerase 0.8691 29 595 GO:0016020

Feature Viewer

pLDDT pTM Quality
79.08 0.81 High
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Predicted Structure (AlphaFold2)

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