F304174

General Info

Members Datasets Scaffolds Average Seq Length
198 123 396 260

Family's Representative Sequence

Representative Sequence 3300005618|Ga0068864_100055618|Ga0068864_1000556182
Length 287
Sequence MRYLSGTEAAFRFYQHCEVSTAMSAPRVLILRAPGTNCDEETAFAFEKAGGVCSSVHIRALCQSPAMLQENAILALPGGFSYGDDLGSGTVIANELMRYLAEPLQRFVERGGLALGICNGFQILVKTGLLPGLSYAPKSADEAPGATLTFNDSQRFEDRWVHLKIEASTSPFLEGHAGEIVELPVAHGEGKFVARDADALRRIEEGKQVAFRYTTAAGGLPEFPENPNGAQNHIAGIVDETGRVLGLMPHPERHVLPWQHPRWTRDGLKKEGDGLFLFKNAIKHAKS

Samples

Sample ID Description Type Environment
1 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
2 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
3 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
4 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
5 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
6 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
7 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
8 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
9 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
10 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
11 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
12 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
13 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
14 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
15 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
16 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
17 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
18 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
19 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
20 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
21 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
22 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
23 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
24 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
25 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
26 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
27 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
28 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
29 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
30 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
38 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
39 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
40 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
41 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
42 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
43 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
44 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
45 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
46 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
47 3300034817 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_1 Metagenome Rhizosphere
48 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
49 3300035115 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_11 Metagenome Rhizosphere
50 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
51 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
52 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
53 3300035207 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 Metagenome Rhizosphere
54 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
55 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
56 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
57 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
58 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
59 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
60 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
61 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
62 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
63 3300038725 Seagrass microbial communities from Seahorse Key, FL, USA - HV0818 Metagenome Unclassified
64 3300038726 Seagrass microbial communities from Seahorse Key, FL, USA - TH0319 Metagenome Unclassified
65 3300039093 Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 Metagenome Unclassified
66 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
67 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
68 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
69 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
70 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
71 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
72 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
73 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
74 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
75 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
76 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
77 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
78 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
79 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
80 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
81 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
82 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
83 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
84 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
85 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
86 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
87 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
88 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
89 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
90 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
91 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
92 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
93 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
94 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
95 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
96 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
97 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
98 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
99 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
100 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
101 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
102 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
103 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
104 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
105 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
106 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
107 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
108 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
109 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
110 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
111 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
112 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
113 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
114 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
115 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
116 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
117 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
118 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
119 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
120 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
121 2523533628 Maridesulfovibrio zosterae DSM 11974 Isolate Rhizosphere
122 2684623219 Planctomyces sp. SH-PL14 Isolate Unclassified
123 2687453257 Planctomyces sp. SH-PL62 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 98.48
Metatranscriptomes 0
Isolates 1.52

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 1.52
Rhizosphere 92.93
Stem 0
Stem Tuber 0
Unclassified 9.09

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0068864_100055618 3300005618 Bacteria 3417
2 Ga0070683_100491282 3300005329 Bacteria 1172
3 Ga0070680_100152886 3300005336 Bacteria 1938
4 Ga0070680_100290640 3300005336 Bacteria 1385
5 Ga0070689_100024488 3300005340 Bacteria 4528
6 Ga0070689_100117171 3300005340 Bacteria 2124
7 Ga0070714_100030709 3300005435 Unclassified 4475
8 Ga0070701_10230373 3300005438 Bacteria 1109
9 Ga0070700_100028538 3300005441 Unclassified 3321
10 Ga0070694_100171011 3300005444 Bacteria 1601
11 Ga0070694_100366552 3300005444 Bacteria 1120
12 Ga0070681_10432621 3300005458 Bacteria 1228
13 Ga0070698_100382995 3300005471 Bacteria 1339
14 Ga0070697_100073772 3300005536 Bacteria 2802
15 Ga0070686_100082503 3300005544 Bacteria 2132
16 Ga0070695_100144564 3300005545 Bacteria 1653
17 Ga0068859_100114501 3300005617 Bacteria 2761
18 Ga0068859_100222488 3300005617 Bacteria 1975
19 Ga0068860_100106418 3300005843 Unclassified 2679
20 Ga0081538_10012886 3300005981 Bacteria 6667
21 Ga0070717_10218350 3300006028 Bacteria 1675
22 Ga0097621_100210843 3300006237 Bacteria 1690
23 Ga0075428_100001806 3300006844 Bacteria 22910
24 Ga0075428_100027007 3300006844 Bacteria 6357
25 Ga0075428_100105347 3300006844 Bacteria 3075
26 Ga0075428_100150593 3300006844 Bacteria 2527
27 Ga0075428_100219936 3300006844 Bacteria 2051
28 Ga0075428_100331036 3300006844 Bacteria 1636
29 Ga0075428_100362779 3300006844 Bacteria 1554
30 Ga0075428_100925916 3300006844 Bacteria 924
31 Ga0075430_100025239 3300006846 Bacteria 5054
32 Ga0075430_100134277 3300006846 Unclassified 2062
33 Ga0075430_100277679 3300006846 Bacteria 1386
34 Ga0075431_100096662 3300006847 Bacteria 3049
35 Ga0075431_100101420 3300006847 Bacteria 2970
36 Ga0075431_100292244 3300006847 Unclassified 1648
37 Ga0075431_100365698 3300006847 Bacteria 1448
38 Ga0075433_10013230 3300006852 Bacteria 6701
39 Ga0075433_10159791 3300006852 Bacteria 2005
40 Ga0075433_10182742 3300006852 Bacteria 1866
41 Ga0075433_10462685 3300006852 Bacteria 1118
42 Ga0097620_100114498 3300006931 Bacteria 2761
43 Ga0097620_100222474 3300006931 Bacteria 1975
44 Ga0075435_100410154 3300007076 Bacteria 1166
45 Ga0111539_10000963 3300009094 Bacteria 37795
46 Ga0111539_10026341 3300009094 Bacteria 7109
47 Ga0111539_10040148 3300009094 Bacteria 5635
48 Ga0111539_10064932 3300009094 Bacteria 4316
49 Ga0111539_10170714 3300009094 Bacteria 2541
50 Ga0111539_10536726 3300009094 Bacteria 1363
51 Ga0105242_10406954 3300009176 Bacteria 1271
52 Ga0105237_10090849 3300009545 Bacteria 3043
53 Ga0105238_10000139 3300009551 Bacteria 80491
54 Ga0099796_10096924 3300010159 Bacteria 1104
55 Ga0207660_10105343 3300025917 Bacteria 2113
56 Ga0207660_10342605 3300025917 Unclassified 1197
57 Ga0207662_10171670 3300025918 Bacteria 1391
58 Ga0207694_10009607 3300025924 Bacteria 7296
59 Ga0207664_10025101 3300025929 Unclassified 4484
60 Ga0207670_10014038 3300025936 Bacteria 4743
61 Ga0207670_10096984 3300025936 Bacteria 2098
62 Ga0207661_10733444 3300025944 Bacteria 909
63 Ga0207708_10119939 3300026075 Bacteria 2049
64 Ga0207428_10024902 3300027907 Bacteria 5019
65 Ga0207428_10026335 3300027907 Bacteria 4855
66 Ga0268264_10086027 3300028381 Unclassified 2700
67 Ga0265334_10013702 3300028573 Bacteria 3391
68 Ga0265323_10000763 3300028653 Bacteria 17253
69 Ga0265323_10009632 3300028653 Bacteria 3935
70 Ga0265323_10048305 3300028653 Bacteria 1519
71 Ga0265322_10001024 3300028654 Bacteria 9718
72 Ga0265322_10004563 3300028654 Bacteria 4119
73 Ga0265336_10002931 3300028666 Bacteria 6849
74 Ga0265338_10000139 3300028800 Bacteria 135334
75 Ga0265338_10017340 3300028800 Bacteria 7771
76 Ga0265338_10048833 3300028800 Bacteria 3845
77 Ga0265327_10009592 3300031251 Bacteria 6956
78 Ga0265316_10000008 3300031344 Bacteria 261948
79 Ga0265316_10000145 3300031344 Bacteria 77692
80 Ga0265316_10093710 3300031344 Bacteria 2288
81 Ga0265316_10466198 3300031344 Unclassified 905
82 Ga0265314_10000462 3300031711 Bacteria 54033
83 Ga0265314_10024935 3300031711 Bacteria 4521
84 Ga0373948_0062412 3300034817 Unclassified 821
85 Ga0373939_0084354 3300035114 Unclassified 1062
86 Ga0373939_0139417 3300035114 Bacteria 873
87 Ga0373941_0050748 3300035115 Unclassified 1318
88 Ga0373957_0094483 3300035120 Bacteria 1191
89 Ga0373943_0047666 3300035170 Bacteria 2096
90 Ga0373955_0044262 3300035172 Bacteria 2397
91 Ga0373942_0005268 3300035207 Bacteria 2997
92 Ga0373962_0059661 3300035242 Bacteria 1118
93 Ga0316574_0052805 3300035398 Bacteria 2536
94 Ga0373931_0012872 3300035691 Bacteria 4063
95 Ga0373931_0074161 3300035691 Bacteria 1864
96 Ga0373927_0007382 3300035695 Bacteria 7439
97 Ga0373937_0012817 3300036401 Bacteria 7383
98 Ga0373937_0417294 3300036401 Bacteria 1274
99 Ga0316582_0018496 3300036647 Bacteria 4057
100 Ga0373925_0000146 3300037068 Bacteria 75193
101 Ga0395905_0005592 3300037471 Bacteria 12803
102 Ga0395901_0408535 3300038443 Bacteria 1394
103 Ga0400484_01992 3300038725 Bacteria 7460
104 Ga0400490_00968 3300038726 Bacteria 93834
105 Ga0400490_48736 3300038726 Bacteria 5062
106 Ga0400489_49866 3300039093 Bacteria 5828
107 Ga0400489_91356 3300039093 Bacteria 7596
108 Ga0436365_1032905 3300039437 Bacteria 4794
109 Ga0436360_0325372 3300039438 Bacteria 5987
110 Ga0436361_0391583 3300039447 Bacteria 5114
111 Ga0436362_0762379 3300039453 Bacteria 4888
112 Ga0451577_0020012 3300042876 Bacteria 6147
113 Ga0451577_0033544 3300042876 Bacteria 4628
114 Ga0451577_0326351 3300042876 Bacteria 1392
115 Ga0451577_0757051 3300042876 Bacteria 878
116 Ga0453683_0000670 3300044673 Bacteria 36455
117 Ga0453683_0128875 3300044673 Bacteria 1594
118 Ga0453684_0000934 3300044712 Bacteria 96601
119 Ga0453684_0028469 3300044712 Bacteria 7969
120 Ga0453684_0032692 3300044712 Bacteria 7271
121 Ga0453684_0035281 3300044712 Bacteria 6918
122 Ga0453684_0112084 3300044712 Bacteria 3312
123 Ga0453684_0144238 3300044712 Bacteria 2839
124 Ga0453684_0822945 3300044712 Bacteria 1000
125 Ga0453684_1195644 3300044712 Bacteria 798
126 Ga0451576_0000153 3300045051 Bacteria 175596
127 Ga0451576_0004090 3300045051 Bacteria 19262
128 Ga0451576_0005001 3300045051 Bacteria 16855
129 Ga0451576_0020030 3300045051 Bacteria 7292
130 Ga0451576_0058513 3300045051 Bacteria 4027
131 Ga0451576_0063719 3300045051 Bacteria 3841
132 Ga0495662_0034125 3300046476 Bacteria 2457
133 Ga0495662_0037110 3300046476 Bacteria 2354
134 Ga0495608_0007660 3300046511 Bacteria 7612
135 Ga0495630_0000001 3300046517 Bacteria 1687293
136 Ga0495630_0022314 3300046517 Bacteria 4675
137 Ga0495666_0167556 3300046526 Bacteria 1017
138 Ga0495640_0062820 3300046533 Bacteria 2518
139 Ga0495586_0112090 3300046535 Bacteria 1519
140 Ga0495587_0170823 3300046536 Bacteria 1235
141 Ga0495581_0076023 3300047315 Bacteria 1943
142 Ga0495604_0032967 3300047317 Bacteria 4102
143 Ga0495636_0001923 3300047318 Bacteria 7945
144 Ga0496104_0615002 3300048907 Bacteria 996
145 Ga0496112_0559105 3300048915 Unclassified 1078
146 Ga0496115_0083172 3300048918 Bacteria 2609
147 Ga0496116_0007660 3300048919 Bacteria 9526
148 Ga0496126_0081295 3300048929 Unclassified 2865
149 Ga0496126_0168790 3300048929 Bacteria 1866
150 Ga0501031_0000210 3300049568 Bacteria 33509
151 Ga0501032_0000364 3300049569 Bacteria 37700
152 Ga0501033_0321483 3300049570 Unclassified 1087
153 Ga0501034_0013004 3300049571 Bacteria 8581
154 Ga0501034_0015085 3300049571 Bacteria 7944
155 Ga0501036_0029759 3300049572 Bacteria 4614
156 Ga0501037_0000038 3300049573 Bacteria 121931
157 Ga0501038_0097423 3300049574 Bacteria 2453
158 Ga0501038_0391283 3300049574 Bacteria 1077
159 Ga0501043_0000261 3300049579 Bacteria 47849
160 Ga0501046_0000065 3300049580 Bacteria 116095
161 Ga0501047_0000299 3300049581 Bacteria 56950
162 Ga0501047_0693077 3300049581 Bacteria 836
163 Ga0501048_0000119 3300049582 Bacteria 45205
164 Ga0501070_0010560 3300049586 Bacteria 7806
165 Ga0501072_0033381 3300049588 Bacteria 4033
166 Ga0501073_0024298 3300049589 Bacteria 4351
167 Ga0501076_0066017 3300049592 Unclassified 2887
168 Ga0501081_0399149 3300049743 Bacteria 1018
169 Ga0501035_0000486 3300049822 Bacteria 44743
170 Ga0501044_0007397 3300049823 Bacteria 12079
171 Ga0501044_0024540 3300049823 Bacteria 6397
172 nmdc:mga09592_640164_c1 3300050508 Bacteria 908
173 nmdc:mga0qj67_135396_c1 3300050509 Bacteria 1996
174 nmdc:mga0qj67_77870_c1 3300050509 Bacteria 2653
175 nmdc:mga0qj67_90082_c1 3300050509 Bacteria 2464
176 nmdc:mga06r32_167218_c1 3300050510 Bacteria 2182
177 nmdc:mga06r32_212921_c1 3300050510 Unclassified 1920
178 nmdc:mga06r32_85147_c1 3300050510 Bacteria 3082
179 nmdc:mga08y16_195792_c1 3300050511 Bacteria 2095
180 nmdc:mga08y16_217957_c1 3300050511 Bacteria 1976
181 nmdc:mga08y16_264_c1 3300050511 Bacteria 47394
182 nmdc:mga08y16_427456_c1 3300050511 Unclassified 1353
183 nmdc:mga08y16_599833_c1 3300050511 Bacteria 1110
184 nmdc:mga08y16_66213_c1 3300050511 Bacteria 3770
185 nmdc:mga0n895_513919_c1 3300050512 Bacteria 1206
186 nmdc:mga0rr50_368246_c1 3300050513 Bacteria 1210
187 nmdc:mga08x19_255164_c1 3300050514 Bacteria 1211
188 nmdc:mga0a205_3797_c1 3300050515 Bacteria 13533
189 nmdc:mga0a205_65259_c1 3300050515 Bacteria 3517
190 Ga0495612_0003528 3300053078 Bacteria 6485
191 Ga0495595_0082638 3300053084 Bacteria 1532
192 Ga0495619_0073145 3300053085 Bacteria 2297
193 Ga0501084_0127303 3300054114 Bacteria 2144
194 Ga0501082_0120872 3300060353 Bacteria 2270
195 Ga0530510_0016978 3300061734 Bacteria 5155
196 2524003857 2523533628 Bacteria 4098242
197 2687234640 2684623219 Bacteria 8442773
198 2688068720 2687453257 Bacteria 6784659
199 Ga0068864_100055618
200 Ga0070683_100491282
201 Ga0070680_100152886
202 Ga0070680_100290640
203 Ga0070689_100024488
204 Ga0070689_100117171
205 Ga0070714_100030709
206 Ga0070701_10230373
207 Ga0070700_100028538
208 Ga0070694_100171011
209 Ga0070694_100366552
210 Ga0070681_10432621
211 Ga0070698_100382995
212 Ga0070697_100073772
213 Ga0070686_100082503
214 Ga0070695_100144564
215 Ga0068859_100114501
216 Ga0068859_100222488
217 Ga0068860_100106418
218 Ga0081538_10012886
219 Ga0070717_10218350
220 Ga0097621_100210843
221 Ga0075428_100001806
222 Ga0075428_100027007
223 Ga0075428_100105347
224 Ga0075428_100150593
225 Ga0075428_100219936
226 Ga0075428_100331036
227 Ga0075428_100362779
228 Ga0075428_100925916
229 Ga0075430_100025239
230 Ga0075430_100134277
231 Ga0075430_100277679
232 Ga0075431_100096662
233 Ga0075431_100101420
234 Ga0075431_100292244
235 Ga0075431_100365698
236 Ga0075433_10013230
237 Ga0075433_10159791
238 Ga0075433_10182742
239 Ga0075433_10462685
240 Ga0097620_100114498
241 Ga0097620_100222474
242 Ga0075435_100410154
243 Ga0111539_10000963
244 Ga0111539_10026341
245 Ga0111539_10040148
246 Ga0111539_10064932
247 Ga0111539_10170714
248 Ga0111539_10536726
249 Ga0105242_10406954
250 Ga0105237_10090849
251 Ga0105238_10000139
252 Ga0099796_10096924
253 Ga0207660_10105343
254 Ga0207660_10342605
255 Ga0207662_10171670
256 Ga0207694_10009607
257 Ga0207664_10025101
258 Ga0207670_10014038
259 Ga0207670_10096984
260 Ga0207661_10733444
261 Ga0207708_10119939
262 Ga0207428_10024902
263 Ga0207428_10026335
264 Ga0268264_10086027
265 Ga0265334_10013702
266 Ga0265323_10000763
267 Ga0265323_10009632
268 Ga0265323_10048305
269 Ga0265322_10001024
270 Ga0265322_10004563
271 Ga0265336_10002931
272 Ga0265338_10000139
273 Ga0265338_10017340
274 Ga0265338_10048833
275 Ga0265327_10009592
276 Ga0265316_10000008
277 Ga0265316_10000145
278 Ga0265316_10093710
279 Ga0265316_10466198
280 Ga0265314_10000462
281 Ga0265314_10024935
282 Ga0373948_0062412
283 Ga0373939_0084354
284 Ga0373939_0139417
285 Ga0373941_0050748
286 Ga0373957_0094483
287 Ga0373943_0047666
288 Ga0373955_0044262
289 Ga0373942_0005268
290 Ga0373962_0059661
291 Ga0316574_0052805
292 Ga0373931_0012872
293 Ga0373931_0074161
294 Ga0373927_0007382
295 Ga0373937_0012817
296 Ga0373937_0417294
297 Ga0316582_0018496
298 Ga0373925_0000146
299 Ga0395905_0005592
300 Ga0395901_0408535
301 Ga0400484_01992
302 Ga0400490_00968
303 Ga0400490_48736
304 Ga0400489_49866
305 Ga0400489_91356
306 Ga0436365_1032905
307 Ga0436360_0325372
308 Ga0436361_0391583
309 Ga0436362_0762379
310 Ga0451577_0020012
311 Ga0451577_0033544
312 Ga0451577_0326351
313 Ga0451577_0757051
314 Ga0453683_0000670
315 Ga0453683_0128875
316 Ga0453684_0000934
317 Ga0453684_0028469
318 Ga0453684_0032692
319 Ga0453684_0035281
320 Ga0453684_0112084
321 Ga0453684_0144238
322 Ga0453684_0822945
323 Ga0453684_1195644
324 Ga0451576_0000153
325 Ga0451576_0004090
326 Ga0451576_0005001
327 Ga0451576_0020030
328 Ga0451576_0058513
329 Ga0451576_0063719
330 Ga0495662_0034125
331 Ga0495662_0037110
332 Ga0495608_0007660
333 Ga0495630_0000001
334 Ga0495630_0022314
335 Ga0495666_0167556
336 Ga0495640_0062820
337 Ga0495586_0112090
338 Ga0495587_0170823
339 Ga0495581_0076023
340 Ga0495604_0032967
341 Ga0495636_0001923
342 Ga0496104_0615002
343 Ga0496112_0559105
344 Ga0496115_0083172
345 Ga0496116_0007660
346 Ga0496126_0081295
347 Ga0496126_0168790
348 Ga0501031_0000210
349 Ga0501032_0000364
350 Ga0501033_0321483
351 Ga0501034_0013004
352 Ga0501034_0015085
353 Ga0501036_0029759
354 Ga0501037_0000038
355 Ga0501038_0097423
356 Ga0501038_0391283
357 Ga0501043_0000261
358 Ga0501046_0000065
359 Ga0501047_0000299
360 Ga0501047_0693077
361 Ga0501048_0000119
362 Ga0501070_0010560
363 Ga0501072_0033381
364 Ga0501073_0024298
365 Ga0501076_0066017
366 Ga0501081_0399149
367 Ga0501035_0000486
368 Ga0501044_0007397
369 Ga0501044_0024540
370 nmdc:mga09592_640164_c1
371 nmdc:mga0qj67_135396_c1
372 nmdc:mga0qj67_77870_c1
373 nmdc:mga0qj67_90082_c1
374 nmdc:mga06r32_167218_c1
375 nmdc:mga06r32_212921_c1
376 nmdc:mga06r32_85147_c1
377 nmdc:mga08y16_195792_c1
378 nmdc:mga08y16_217957_c1
379 nmdc:mga08y16_264_c1
380 nmdc:mga08y16_427456_c1
381 nmdc:mga08y16_599833_c1
382 nmdc:mga08y16_66213_c1
383 nmdc:mga0n895_513919_c1
384 nmdc:mga0rr50_368246_c1
385 nmdc:mga08x19_255164_c1
386 nmdc:mga0a205_3797_c1
387 nmdc:mga0a205_65259_c1
388 Ga0495612_0003528
389 Ga0495595_0082638
390 Ga0495619_0073145
391 Ga0501084_0127303
392 Ga0501082_0120872
393 Ga0530510_0016978
394 2524003857
395 2687234640
396 2688068720

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13507

GATase_5

CobB/CobQ-like glutamine amidotransferase domain

25

285

0.93

Structural Annotation

Top 5 Hits

ID Description Score Start End
6jta-assembly1.cif.gz_A crystal structure of d464a l465a mutant of fgam synthetase 0.8165 3 232
6jt8-assembly1.cif.gz_A crystal structure of 450-451_deletion mutant of fgam synthetase 0.8151 3 232
3ugj-assembly1.cif.gz_A formyl glycinamide ribonucletide amidotransferase from salmonella typhimurum: role of the atp complexation and glutaminase domain in catalytic coupling 0.8126 3 232
6lyk-assembly1.cif.gz_A crystal structure of r1263a mutant of formylglycinamidine synthetase 0.8126 4 232
4r7g-assembly1.cif.gz_A determination of the formylglycinamide ribonucleotide amidotransferase ammonia pathway by combining 3d-rism theory with experiment 0.812 3 232
ID Description Score Start End Superfamily
af_Q19311_995_1323_3.40.50.880 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Class I glutamine amidotransferase (GATase) domain 0.8318 1 231 3.40.50.880
af_Q9N4A9_35_198_3.40.50.10330 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Probable inorganic polyphosphate/atp-NAD kinase; domain 1 0.8208 19 58 3.40.50.10330
4r7gA04 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Class I glutamine amidotransferase (GATase) domain 0.812 3 232 3.40.50.880
af_Q9M8D3_1085_1405_3.40.50.880 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Class I glutamine amidotransferase (GATase) domain 0.8093 1 231 3.40.50.880
af_P35421_1030_1350_3.40.50.880 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Class I glutamine amidotransferase (GATase) domain 0.8091 1 231 3.40.50.880
ID Description Score Start End GO Terms
AF-A0A0G0ZDB4-F1-model_v4 Phosphoribosylformylglycinamidine synthase 1 0.9774 72 234 GO:0004642
GO:0005737
GO:0006164
GO:0006541
AF-A0A351CDK9-F1-model_v4 Phosphoribosylformylglycinamidine synthase 0.9556 3 60
AF-A0A1F6EC33-F1-model_v4 Phosphoribosylformylglycinamidine synthase I 0.9367 9 232 GO:0004642
GO:0005737
GO:0006189
GO:0006541
AF-A0A351CDK9-F1-model_v4 Phosphoribosylformylglycinamidine synthase 0.9246 3 60
AF-A0A1F6W6N2-F1-model_v4 Uncharacterized protein 0.9219 2 237 GO:0004642
GO:0005737
GO:0006189
GO:0006541

Map