F301962

General Info

Members Datasets Scaffolds Average Seq Length
196 124 392 263

Family's Representative Sequence

Representative Sequence 3300045836|Ga0466958_0203002|Ga0466958_0203002_69_962
Length 297
Sequence LTNTAASWGFGLDLWRDGPNITGVEQQFQADPEDAGEAPAVVLPSHGTAAVDRSADLLLRVLESERPVALSELAAAAGIPKSTASRLLRALERRGLVTQDGTRGRLRPGPAILRVAERGMLERNIVELAGPYLDTLSGVSGETINLAVPAPLGVEHVAQVDTTHFLGVGQWLGRSVDFHSTANGKVFLAFGRAPLPEEPIIAHTAYTLVDRASLVAELEGIRDTGYAAAVDELEVGLAAIAAPVHGARGDVIAALSISGPTVRMTPERIDELAPSLISEAQGLSHRLGHPEEGEHAA

Samples

Sample ID Description Type Environment
1 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
2 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
5 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
6 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
7 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
8 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
9 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
10 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
11 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
12 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
13 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
14 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
15 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
16 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
17 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
18 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
19 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
20 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
21 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
22 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
23 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
24 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
25 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
26 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
27 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
28 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
29 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
30 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
31 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
32 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
33 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
34 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
35 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
36 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
37 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
38 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
39 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
40 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
41 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
42 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
43 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
44 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
45 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
46 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
47 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
48 3300041498 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_5 MetaG Metagenome Unclassified
49 3300042001 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z081617_5542 Metagenome Rhizosphere
50 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
51 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
52 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
53 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
54 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
55 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
56 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
57 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
58 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
59 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
60 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
61 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
62 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
63 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
64 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
65 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
66 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
67 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
68 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
69 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
70 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
71 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
72 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
73 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
74 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
75 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
76 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
77 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
78 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
79 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
80 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
81 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
82 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
83 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
84 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
85 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
86 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
87 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
88 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
89 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
90 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
91 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
92 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
93 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
94 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
95 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
96 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
97 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
98 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
99 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
100 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
101 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
102 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
103 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
104 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
105 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
106 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
107 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
108 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
109 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
110 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
111 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
112 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
113 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
114 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
115 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
116 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
117 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
118 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
119 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
120 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
121 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
122 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
123 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
124 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.53
Nodule 0
Rhizoplane 4.59
Rhizosphere 79.59
Stem 0
Stem Tuber 0
Unclassified 2.04

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0466958_0203002 3300045836 Bacteria 1262
2 JGI25406J46586_10001479 3300003203 Bacteria 11068
3 Ga0070683_100159352 3300005329 Bacteria 2141
4 Ga0070714_100004996 3300005435 Bacteria 10082
5 Ga0070714_100045682 3300005435 Bacteria 3713
6 Ga0070714_100105286 3300005435 Bacteria 2491
7 Ga0070663_100418234 3300005455 Bacteria 1099
8 Ga0070706_100287739 3300005467 Bacteria 1534
9 Ga0070699_100295416 3300005518 Bacteria 1453
10 Ga0070696_100326846 3300005546 Bacteria 1182
11 Ga0068856_100619300 3300005614 Bacteria 1103
12 Ga0070717_10002239 3300006028 Bacteria 13559
13 Ga0070717_10006081 3300006028 Bacteria 8857
14 Ga0070717_10107818 3300006028 Bacteria 2372
15 Ga0070717_10236023 3300006028 Bacteria 1611
16 Ga0070717_10283168 3300006028 Bacteria 1471
17 Ga0070717_10398805 3300006028 Bacteria 1236
18 Ga0070716_100081700 3300006173 Bacteria 1930
19 Ga0070712_100039069 3300006175 Bacteria 3246
20 Ga0097621_100494633 3300006237 Bacteria 1107
21 Ga0213874_10000471 3300021377 Bacteria 8064
22 Ga0213876_10002618 3300021384 Bacteria 10510
23 Ga0213876_10011161 3300021384 Bacteria 4803
24 Ga0213876_10041782 3300021384 Bacteria 2422
25 Ga0213876_10050532 3300021384 Bacteria 2197
26 Ga0213875_10000039 3300021388 Bacteria 156845
27 Ga0213875_10058213 3300021388 Bacteria 1809
28 Ga0207692_10028267 3300025898 Bacteria 2650
29 Ga0207693_10008922 3300025915 Bacteria 8185
30 Ga0207663_10099711 3300025916 Bacteria 1948
31 Ga0207700_10017310 3300025928 Bacteria 4813
32 Ga0207664_10004793 3300025929 Bacteria 9194
33 Ga0207664_10070989 3300025929 Bacteria 2804
34 Ga0207664_10298987 3300025929 Bacteria 1416
35 Ga0207690_10267801 3300025932 Bacteria 1326
36 Ga0207686_10367893 3300025934 Bacteria 1087
37 Ga0207665_10065910 3300025939 Bacteria 2463
38 Ga0207702_10213588 3300026078 Bacteria 1795
39 Ga0265340_10000078 3300031247 Bacteria 46872
40 Ga0307513_10000671 3300031456 Bacteria 49068
41 Ga0307405_10215144 3300031731 Bacteria 1406
42 Ga0373923_0062259 3300035111 Bacteria 1587
43 Ga0373953_0020258 3300035117 Bacteria 2484
44 Ga0373954_0016147 3300035118 Bacteria 3341
45 Ga0373956_0023448 3300035119 Bacteria 2649
46 Ga0373957_0048312 3300035120 Bacteria 1621
47 Ga0373955_0012564 3300035172 Bacteria 4071
48 Ga0373924_0023581 3300035410 Bacteria 2417
49 Ga0373931_0166802 3300035691 Bacteria 1295
50 Ga0373933_0310049 3300035724 Bacteria 1022
51 Ga0373937_0003634 3300036401 Bacteria 13010
52 Ga0395900_0064313 3300037418 Bacteria 3771
53 Ga0395898_0027247 3300037466 Bacteria 5739
54 Ga0395898_0065694 3300037466 Bacteria 3517
55 Ga0436364_0335849 3300037853 Bacteria 13360
56 Ga0436364_0391054 3300037853 Bacteria 8354
57 Ga0436364_0715173 3300037853 Bacteria 4398
58 Ga0436364_0720375 3300037853 Bacteria 1401
59 Ga0436364_1255310 3300037853 Bacteria 65530
60 Ga0395901_0287282 3300038443 Bacteria 1708
61 Ga0436365_0246220 3300039437 Bacteria 15818
62 Ga0436365_0270155 3300039437 Bacteria 12594
63 Ga0436365_0597499 3300039437 Bacteria 2818
64 Ga0436365_0923682 3300039437 Bacteria 4100
65 Ga0436365_1555601 3300039437 Bacteria 5682
66 Ga0436365_1678100 3300039437 Bacteria 2478
67 Ga0436365_1888799 3300039437 Bacteria 3195
68 Ga0436360_0751426 3300039438 Bacteria 1057
69 Ga0436363_0697331 3300039450 Bacteria 5769
70 Ga0436363_0771094 3300039450 Unclassified 972
71 Ga0436363_1106288 3300039450 Bacteria 1225
72 Ga0436363_1125830 3300039450 Bacteria 1291
73 Ga0436363_1413137 3300039450 Bacteria 34580
74 Ga0436363_1425340 3300039450 Bacteria 1124
75 Ga0436362_0918124 3300039453 Bacteria 7203
76 Ga0451837_0888160 3300041494 Bacteria 946
77 Ga0451841_0653135 3300041498 Bacteria 2516
78 Ga0439441_001718 3300042001 Bacteria 2944
79 Ga0466969_0046285 3300044656 Bacteria 2158
80 Ga0466966_0283061 3300044684 Bacteria 997
81 Ga0466961_0009240 3300044693 Bacteria 6277
82 Ga0466961_0028075 3300044693 Bacteria 3619
83 Ga0466961_0158786 3300044693 Bacteria 1410
84 Ga0466961_0243928 3300044693 Bacteria 1104
85 Ga0466961_0305785 3300044693 Bacteria 971
86 Ga0466963_0003279 3300044694 Bacteria 9225
87 Ga0466963_0007737 3300044694 Bacteria 6421
88 Ga0466963_0028555 3300044694 Bacteria 3583
89 Ga0466963_0041565 3300044694 Bacteria 3016
90 Ga0466963_0098473 3300044694 Bacteria 1999
91 Ga0466971_0001915 3300044719 Bacteria 8830
92 Ga0466971_0011015 3300044719 Bacteria 3958
93 Ga0466971_0011318 3300044719 Bacteria 3906
94 Ga0466971_0065437 3300044719 Bacteria 1646
95 Ga0466968_0030126 3300044735 Bacteria 2247
96 Ga0466957_0039242 3300044842 Bacteria 2856
97 Ga0466960_0028290 3300044901 Bacteria 2564
98 Ga0466960_0086913 3300044901 Bacteria 1586
99 Ga0466959_0002339 3300045049 Bacteria 12105
100 Ga0466959_0022639 3300045049 Bacteria 4646
101 Ga0466959_0025591 3300045049 Bacteria 4375
102 Ga0466959_0033899 3300045049 Bacteria 3777
103 Ga0466959_0047079 3300045049 Bacteria 3172
104 Ga0466959_0078358 3300045049 Bacteria 2383
105 Ga0466959_0338632 3300045049 Bacteria 1026
106 Ga0466958_0005878 3300045836 Bacteria 6637
107 Ga0466958_0006233 3300045836 Bacteria 6474
108 Ga0466958_0006461 3300045836 Bacteria 6381
109 Ga0466958_0021707 3300045836 Bacteria 3755
110 Ga0466958_0063017 3300045836 Bacteria 2261
111 Ga0466958_0064445 3300045836 Bacteria 2235
112 Ga0466958_0102316 3300045836 Bacteria 1782
113 Ga0466967_0150846 3300045976 Bacteria 2172
114 Ga0466967_0169080 3300045976 Bacteria 2056
115 Ga0466967_0388027 3300045976 Bacteria 1357
116 Ga0466967_0747710 3300045976 Bacteria 970
117 Ga0495592_0037762 3300046454 Bacteria 3635
118 Ga0495651_0003098 3300046462 Bacteria 12841
119 Ga0495653_0001062 3300046463 Bacteria 21156
120 Ga0495584_0076773 3300046491 Bacteria 1680
121 Ga0495608_0002237 3300046511 Bacteria 13977
122 Ga0495618_0002743 3300046514 Bacteria 11199
123 Ga0495628_0049546 3300046516 Bacteria 3326
124 Ga0495644_0138840 3300046523 Bacteria 928
125 Ga0495652_0078399 3300046529 Bacteria 2735
126 Ga0495652_0131290 3300046529 Bacteria 1983
127 Ga0495665_0177387 3300046531 Bacteria 1108
128 Ga0495587_0063485 3300046536 Bacteria 2160
129 Ga0495645_0126341 3300046543 Bacteria 1797
130 Ga0495667_0000657 3300046559 Bacteria 22086
131 Ga0495634_0032467 3300046642 Bacteria 3591
132 Ga0495635_0004296 3300046663 Bacteria 9865
133 Ga0495657_0004912 3300046675 Bacteria 10637
134 Ga0495623_0032459 3300046679 Bacteria 3356
135 Ga0495646_0064819 3300046680 Bacteria 2164
136 Ga0495613_0223204 3300046689 Bacteria 1322
137 Ga0495600_0018542 3300046809 Bacteria 4434
138 Ga0495674_0030757 3300047319 Bacteria 4879
139 Ga0495680_0003801 3300047322 Bacteria 14655
140 Ga0495679_063988 3300047446 Bacteria 1073
141 Ga0495684_0004016 3300047471 Bacteria 11476
142 Ga0496100_0347668 3300048903 Unclassified 1119
143 Ga0496101_0075414 3300048904 Unclassified 2483
144 Ga0496101_0167270 3300048904 Bacteria 1689
145 Ga0496105_0049853 3300048908 Bacteria 3458
146 Ga0496112_0001710 3300048915 Bacteria 17142
147 Ga0496113_0026116 3300048916 Bacteria 4172
148 Ga0496114_0007450 3300048917 Bacteria 8653
149 Ga0496114_0638360 3300048917 Bacteria 937
150 Ga0496115_0309992 3300048918 Bacteria 1292
151 Ga0501031_0053437 3300049568 Bacteria 2632
152 Ga0501032_0054316 3300049569 Bacteria 2696
153 Ga0501032_0074483 3300049569 Bacteria 2262
154 Ga0501033_0006435 3300049570 Bacteria 9196
155 Ga0501033_0027409 3300049570 Bacteria 4284
156 Ga0501034_0038271 3300049571 Bacteria 4857
157 Ga0501036_0021704 3300049572 Bacteria 5397
158 Ga0501036_0342559 3300049572 Bacteria 1248
159 Ga0501037_0010286 3300049573 Bacteria 6867
160 Ga0501038_0051101 3300049574 Bacteria 3569
161 Ga0501042_0257555 3300049578 Bacteria 1259
162 Ga0501043_0015408 3300049579 Bacteria 5986
163 Ga0501046_0042574 3300049580 Bacteria 3620
164 Ga0501046_0124520 3300049580 Bacteria 1959
165 Ga0501047_0083254 3300049581 Bacteria 3074
166 Ga0501048_0011451 3300049582 Bacteria 6617
167 Ga0501048_0027591 3300049582 Bacteria 4125
168 Ga0501067_0004857 3300049583 Bacteria 7461
169 Ga0501068_0163790 3300049584 Bacteria 1402
170 Ga0501068_0223706 3300049584 Bacteria 1196
171 Ga0501069_0020952 3300049585 Bacteria 3545
172 Ga0501071_0342739 3300049587 Bacteria 1137
173 Ga0501071_0409077 3300049587 Bacteria 1036
174 Ga0501073_0027823 3300049589 Bacteria 4040
175 Ga0501074_0037548 3300049590 Bacteria 3511
176 Ga0501075_0015686 3300049591 Bacteria 5442
177 Ga0501076_0341254 3300049592 Unclassified 1229
178 Ga0501079_0068538 3300049741 Bacteria 2738
179 Ga0501080_0055490 3300049742 Bacteria 3690
180 Ga0501081_0004196 3300049743 Bacteria 9239
181 Ga0501035_0015888 3300049822 Bacteria 6946
182 Ga0501044_0057873 3300049823 Bacteria 3976
183 Ga0501045_0036190 3300049824 Bacteria 3584
184 Ga0495612_0047679 3300053078 Bacteria 1756
185 Ga0495595_0086654 3300053084 Bacteria 1498
186 Ga0500604_0024411 3300053151 Bacteria 1731
187 Ga0500616_0000116 3300053153 Bacteria 145790
188 Ga0500616_0001659 3300053153 Bacteria 20584
189 Ga0501084_0002055 3300054114 Bacteria 16065
190 Ga0501084_0091768 3300054114 Bacteria 2550
191 Ga0501082_0012929 3300060353 Bacteria 7176
192 Ga0466962_0007866 3300061719 Bacteria 5114
193 Ga0466962_0013397 3300061719 Bacteria 3947
194 Ga0466962_0064873 3300061719 Bacteria 1743
195 Ga0530510_0096951 3300061734 Bacteria 2155
196 Ga0530510_0438237 3300061734 Bacteria 987
197 Ga0466958_0203002
198 JGI25406J46586_10001479
199 Ga0070683_100159352
200 Ga0070714_100004996
201 Ga0070714_100045682
202 Ga0070714_100105286
203 Ga0070663_100418234
204 Ga0070706_100287739
205 Ga0070699_100295416
206 Ga0070696_100326846
207 Ga0068856_100619300
208 Ga0070717_10002239
209 Ga0070717_10006081
210 Ga0070717_10107818
211 Ga0070717_10236023
212 Ga0070717_10283168
213 Ga0070717_10398805
214 Ga0070716_100081700
215 Ga0070712_100039069
216 Ga0097621_100494633
217 Ga0213874_10000471
218 Ga0213876_10002618
219 Ga0213876_10011161
220 Ga0213876_10041782
221 Ga0213876_10050532
222 Ga0213875_10000039
223 Ga0213875_10058213
224 Ga0207692_10028267
225 Ga0207693_10008922
226 Ga0207663_10099711
227 Ga0207700_10017310
228 Ga0207664_10004793
229 Ga0207664_10070989
230 Ga0207664_10298987
231 Ga0207690_10267801
232 Ga0207686_10367893
233 Ga0207665_10065910
234 Ga0207702_10213588
235 Ga0265340_10000078
236 Ga0307513_10000671
237 Ga0307405_10215144
238 Ga0373923_0062259
239 Ga0373953_0020258
240 Ga0373954_0016147
241 Ga0373956_0023448
242 Ga0373957_0048312
243 Ga0373955_0012564
244 Ga0373924_0023581
245 Ga0373931_0166802
246 Ga0373933_0310049
247 Ga0373937_0003634
248 Ga0395900_0064313
249 Ga0395898_0027247
250 Ga0395898_0065694
251 Ga0436364_0335849
252 Ga0436364_0391054
253 Ga0436364_0715173
254 Ga0436364_0720375
255 Ga0436364_1255310
256 Ga0395901_0287282
257 Ga0436365_0246220
258 Ga0436365_0270155
259 Ga0436365_0597499
260 Ga0436365_0923682
261 Ga0436365_1555601
262 Ga0436365_1678100
263 Ga0436365_1888799
264 Ga0436360_0751426
265 Ga0436363_0697331
266 Ga0436363_0771094
267 Ga0436363_1106288
268 Ga0436363_1125830
269 Ga0436363_1413137
270 Ga0436363_1425340
271 Ga0436362_0918124
272 Ga0451837_0888160
273 Ga0451841_0653135
274 Ga0439441_001718
275 Ga0466969_0046285
276 Ga0466966_0283061
277 Ga0466961_0009240
278 Ga0466961_0028075
279 Ga0466961_0158786
280 Ga0466961_0243928
281 Ga0466961_0305785
282 Ga0466963_0003279
283 Ga0466963_0007737
284 Ga0466963_0028555
285 Ga0466963_0041565
286 Ga0466963_0098473
287 Ga0466971_0001915
288 Ga0466971_0011015
289 Ga0466971_0011318
290 Ga0466971_0065437
291 Ga0466968_0030126
292 Ga0466957_0039242
293 Ga0466960_0028290
294 Ga0466960_0086913
295 Ga0466959_0002339
296 Ga0466959_0022639
297 Ga0466959_0025591
298 Ga0466959_0033899
299 Ga0466959_0047079
300 Ga0466959_0078358
301 Ga0466959_0338632
302 Ga0466958_0005878
303 Ga0466958_0006233
304 Ga0466958_0006461
305 Ga0466958_0021707
306 Ga0466958_0063017
307 Ga0466958_0064445
308 Ga0466958_0102316
309 Ga0466967_0150846
310 Ga0466967_0169080
311 Ga0466967_0388027
312 Ga0466967_0747710
313 Ga0495592_0037762
314 Ga0495651_0003098
315 Ga0495653_0001062
316 Ga0495584_0076773
317 Ga0495608_0002237
318 Ga0495618_0002743
319 Ga0495628_0049546
320 Ga0495644_0138840
321 Ga0495652_0078399
322 Ga0495652_0131290
323 Ga0495665_0177387
324 Ga0495587_0063485
325 Ga0495645_0126341
326 Ga0495667_0000657
327 Ga0495634_0032467
328 Ga0495635_0004296
329 Ga0495657_0004912
330 Ga0495623_0032459
331 Ga0495646_0064819
332 Ga0495613_0223204
333 Ga0495600_0018542
334 Ga0495674_0030757
335 Ga0495680_0003801
336 Ga0495679_063988
337 Ga0495684_0004016
338 Ga0496100_0347668
339 Ga0496101_0075414
340 Ga0496101_0167270
341 Ga0496105_0049853
342 Ga0496112_0001710
343 Ga0496113_0026116
344 Ga0496114_0007450
345 Ga0496114_0638360
346 Ga0496115_0309992
347 Ga0501031_0053437
348 Ga0501032_0054316
349 Ga0501032_0074483
350 Ga0501033_0006435
351 Ga0501033_0027409
352 Ga0501034_0038271
353 Ga0501036_0021704
354 Ga0501036_0342559
355 Ga0501037_0010286
356 Ga0501038_0051101
357 Ga0501042_0257555
358 Ga0501043_0015408
359 Ga0501046_0042574
360 Ga0501046_0124520
361 Ga0501047_0083254
362 Ga0501048_0011451
363 Ga0501048_0027591
364 Ga0501067_0004857
365 Ga0501068_0163790
366 Ga0501068_0223706
367 Ga0501069_0020952
368 Ga0501071_0342739
369 Ga0501071_0409077
370 Ga0501073_0027823
371 Ga0501074_0037548
372 Ga0501075_0015686
373 Ga0501076_0341254
374 Ga0501079_0068538
375 Ga0501080_0055490
376 Ga0501081_0004196
377 Ga0501035_0015888
378 Ga0501044_0057873
379 Ga0501045_0036190
380 Ga0495612_0047679
381 Ga0495595_0086654
382 Ga0500604_0024411
383 Ga0500616_0000116
384 Ga0500616_0001659
385 Ga0501084_0002055
386 Ga0501084_0091768
387 Ga0501082_0012929
388 Ga0466962_0007866
389 Ga0466962_0013397
390 Ga0466962_0064873
391 Ga0530510_0096951
392 Ga0530510_0438237

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF09339

HTH_IclR

IclR helix-turn-helix domain

50

101

0.97

PF01047

MarR

MarR family

55

99

0.96

PF01614

IclR

Bacterial transcriptional regulator

119

285

0.96

PF12840

HTH_20

Helix-turn-helix domain

57

100

0.96

PF13463

HTH_27

Winged helix DNA-binding domain

51

107

0.9

PF01022

HTH_5

Bacterial regulatory protein, arsR family

57

99

0.88

PF12802

MarR_2

MarR family

52

106

0.8

Structural Annotation

Top 5 Hits

ID Description Score Start End
4awx-assembly1.cif.gz_B moonlighting functions of feoc in the regulation of ferrous iron transport in feo 0.9591 15 70
1tf1-assembly2.cif.gz_B crystal structure of the e. coli glyoxylate regulatory protein ligand binding domain 0.9569 79 252
1z6r-assembly1.cif.gz_A crystal structure of mlc from escherichia coli 0.9565 28 59
2o99-assembly2.cif.gz_B the crystal structure of e.coli iclr c-terminal fragment in complex with glyoxylate 0.9406 85 252
7wqu-assembly1.cif.gz_B feoc from klebsiella pneumoniae 0.9394 15 70
ID Description Score Start End Superfamily
af_P77732_79_254_3.30.450.40 Alpha Beta;2-Layer Sandwich;Beta-Lactamase;GAF domain 0.9667 84 256 3.30.450.40
af_Q5NE14_88_145_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9666 11 68 1.10.10.10
af_P15082_1_58_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9624 11 68 1.10.10.10
af_P0ACK8_1_59_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9618 11 68 1.10.10.10
af_P77569_1_73_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9591 9 68 1.10.10.10
ID Description Score Start End GO Terms
AF-A0A2V9QTZ5-F1-model_v4 IclR-ED domain-containing protein 0.9632 85 251 GO:0003677
GO:0003700
GO:0045892
AF-A0A530M694-F1-model_v4 deleted 0.9572 137 229
AF-A0A4U3A0W5-F1-model_v4 IclR family transcriptional regulator 0.9569 67 255 GO:0003677
GO:0003700
GO:0045892
AF-X1T2F9-F1-model_v4 IclR-ED domain-containing protein 0.9563 93 256 GO:0003677
GO:0003700
GO:0045892
AF-X1EUD4-F1-model_v4 IclR-ED domain-containing protein 0.9557 89 258 GO:0003677
GO:0003700
GO:0045892

Map