F301318
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 196 | 140 | 184 | 729 |
Family's Representative Sequence
| Representative Sequence | 3300005843|Ga0068860_100088441|Ga0068860_1000884412 |
| Length | 782 |
| Sequence | MSLTDLSFGFDPCFSRCLYALFLSCLCGFPVRRLRIADCRLPFHGFVSSAYLYAMKLLFPISLLAQSFTQDEITRWQQQAKQVTIIRDKWGIPHIYGKTDADCVFGLLYAQCEDDFKRVENNYIDILGRTAEINGKKNLYNDLYTQLLIDSAGAKADYKDSPDWLKKLIQAFADGVNYYLYKHPTVRPAVLSRFEPWFQLMWTDGSIAAIQSGGLTVDELEKFYSPDSIPTSTGYTKPIKEEVATGSNGFALAPSRTASGNPILYINPHVTFYFRPEVHMISEEGLNTYGAVTWGQVFVYQGFNEHCGWMHTSGYSDVADLYAEETLKKGPFPYYTYNGVNLPVKKREITLQYKDGDRMDTITFNTWFTHHGPVMGKRNGKWISVKANNRSLNALIQSWQRTKANGFEAFKKTMALLSNASNNTVFADDKGNIAYWHGNFIPRRDTAYDWTQAVDGSSDKTAWRGVHLLDQTIHVYNPASGFIQNCNSTPYTVSGSSSPQKGKYPVYMSTEPENFRGITAARLLAKAKKFTIDSMIATGYNTYLAAFEELVPALVNRYENDLPKTDSIYIKLAEPVDLLKKWDLKASAASIPTTLAIEWIQKLQPLINLVRVNGKEVDLVTRVHEYAKTATAPELAGTLLSVVNELTGKFGTWKTSWGTINRYQRLTGNSPETYDDNKPSLPVGMAASTWGCLPSFVSRYVNGSQKRYGYNGNSFVCAVEFGKKIKARSLLTGGESGNPASKHFGDQAEMYTKGIFKEVLFYKEDVLKGMERKYSPGEEGLK |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 2513020052 | Flavobacterium sp. CF136 | Isolate | Rhizosphere |
| 2 | 2643221600 | Flavobacterium sp. Root186 | Isolate | Unclassified |
| 3 | 2643221667 | Flavobacterium sp. Root420 | Isolate | Unclassified |
| 4 | 2643221716 | Flavobacterium sp. Root901 | Isolate | Unclassified |
| 5 | 2738541278 | Niastella sp. CF465 | Isolate | Unclassified |
| 6 | 2839989709 | Pontibacter arcticus 2b14 | Isolate | Unclassified |
| 7 | 2902048731 | Pedobacter ureilyticus THG-T11 | Isolate | Rhizosphere |
| 8 | 2904555929 | Flavobacterium sp. 1750 | Isolate | Rhizosphere |
| 9 | 2910245624 | Adhaeribacter radiodurans KUDC8001 | Isolate | Rhizosphere |
| 10 | 2919191525 | Flavobacterium sp. 2755 | Isolate | Rhizosphere |
| 11 | 2929150217 | Flavobacterium sp. R-74510 Hybrid assembly | Isolate | Unclassified |
| 12 | 3300002459 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6 | Metagenome | Rhizosphere |
| 13 | 3300003320 | Sugarcane root Sample H2 | Metagenome | Unclassified |
| 14 | 3300003322 | Sugarcane root Sample L2 | Metagenome | Unclassified |
| 15 | 3300003323 | Sugarcane root Sample H1 | Metagenome | Unclassified |
| 16 | 3300003794 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 | Metagenome | Endosphere |
| 17 | 3300005288 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) | Metagenome | Rhizosphere |
| 18 | 3300005290 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) | Metagenome | Rhizosphere |
| 19 | 3300005295 | Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) | Metagenome | Rhizosphere |
| 20 | 3300005331 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG | Metagenome | Rhizosphere |
| 21 | 3300005334 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 | Metagenome | Rhizosphere |
| 22 | 3300005335 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG | Metagenome | Rhizosphere |
| 23 | 3300005337 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG | Metagenome | Rhizosphere |
| 24 | 3300005338 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 | Metagenome | Rhizosphere |
| 25 | 3300005347 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG | Metagenome | Rhizosphere |
| 26 | 3300005353 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG | Metagenome | Rhizosphere |
| 27 | 3300005356 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG | Metagenome | Rhizosphere |
| 28 | 3300005365 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG | Metagenome | Rhizosphere |
| 29 | 3300005367 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG | Metagenome | Rhizosphere |
| 30 | 3300005466 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG | Metagenome | Rhizosphere |
| 31 | 3300005471 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG | Metagenome | Rhizosphere |
| 32 | 3300005539 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 | Metagenome | Rhizosphere |
| 33 | 3300005563 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 | Metagenome | Rhizosphere |
| 34 | 3300005577 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 | Metagenome | Rhizosphere |
| 35 | 3300005616 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 | Metagenome | Rhizosphere |
| 36 | 3300005617 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 | Metagenome | Rhizosphere |
| 37 | 3300005618 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 | Metagenome | Rhizosphere |
| 38 | 3300005834 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 | Metagenome | Rhizosphere |
| 39 | 3300005840 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 | Metagenome | Rhizosphere |
| 40 | 3300005841 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 | Metagenome | Rhizosphere |
| 41 | 3300005842 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 | Metagenome | Rhizosphere |
| 42 | 3300005843 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 | Metagenome | Rhizosphere |
| 43 | 3300005844 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 | Metagenome | Rhizosphere |
| 44 | 3300006195 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 | Metagenome | Endosphere |
| 45 | 3300006237 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 46 | 3300006358 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 | Metagenome | Rhizosphere |
| 47 | 3300006844 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 | Metagenome | Rhizosphere |
| 48 | 3300006846 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 | Metagenome | Rhizosphere |
| 49 | 3300006847 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 | Metagenome | Rhizosphere |
| 50 | 3300006880 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 | Metagenome | Rhizosphere |
| 51 | 3300006881 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 | Metagenome | Rhizosphere |
| 52 | 3300006931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 53 | 3300009093 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG | Metagenome | Rhizosphere |
| 54 | 3300009147 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 55 | 3300009174 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG | Metagenome | Rhizosphere |
| 56 | 3300009176 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG | Metagenome | Rhizosphere |
| 57 | 3300009177 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG | Metagenome | Rhizosphere |
| 58 | 3300009545 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG | Metagenome | Rhizosphere |
| 59 | 3300009553 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG | Metagenome | Rhizosphere |
| 60 | 3300010375 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG | Metagenome | Rhizosphere |
| 61 | 3300011119 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG | Metagenome | Rhizosphere |
| 62 | 3300013102 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG | Metagenome | Rhizosphere |
| 63 | 3300013104 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG | Metagenome | Rhizosphere |
| 64 | 3300013297 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG | Metagenome | Rhizosphere |
| 65 | 3300013306 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG | Metagenome | Rhizosphere |
| 66 | 3300013308 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG | Metagenome | Rhizosphere |
| 67 | 3300014325 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG | Metagenome | Rhizosphere |
| 68 | 3300014326 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG | Metagenome | Rhizosphere |
| 69 | 3300014969 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG | Metagenome | Rhizosphere |
| 70 | 3300025250 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) | Metagenome | Unclassified |
| 71 | 3300025304 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 72 | 3300025893 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 73 | 3300025903 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 74 | 3300025907 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 75 | 3300025911 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 76 | 3300025913 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 77 | 3300025914 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 78 | 3300025923 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 79 | 3300025926 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 80 | 3300025934 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 81 | 3300025936 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 82 | 3300025940 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 83 | 3300025942 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 84 | 3300025949 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 85 | 3300025961 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 86 | 3300025986 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 87 | 3300026035 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 88 | 3300026041 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 89 | 3300026075 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 90 | 3300026088 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 91 | 3300026116 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 92 | 3300026118 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 93 | 3300028381 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 94 | 3300028786 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM | Metagenome | Unclassified |
| 95 | 3300028794 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM | Metagenome | Unclassified |
| 96 | 3300028800 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG | Metagenome | Rhizosphere |
| 97 | 3300031251 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG | Metagenome | Rhizosphere |
| 98 | 3300031456 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM | Metagenome | Unclassified |
| 99 | 3300031507 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM | Metagenome | Unclassified |
| 100 | 3300031616 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM | Metagenome | Unclassified |
| 101 | 3300032004 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 | Metagenome | Rhizosphere |
| 102 | 3300033180 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM | Metagenome | Unclassified |
| 103 | 3300035695 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 | Metagenome | Rhizosphere |
| 104 | 3300044656 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R | Metagenome | Rhizosphere |
| 105 | 3300044658 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R | Metagenome | Rhizosphere |
| 106 | 3300044684 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R | Metagenome | Rhizosphere |
| 107 | 3300044712 | Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED | Metagenome | Rhizosphere |
| 108 | 3300044735 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R | Metagenome | Rhizosphere |
| 109 | 3300044842 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R | Metagenome | Rhizosphere |
| 110 | 3300045049 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R | Metagenome | Rhizosphere |
| 111 | 3300046507 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere | Metagenome | Rhizosphere |
| 112 | 3300046616 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere | Metagenome | Rhizosphere |
| 113 | 3300047320 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere | Metagenome | Rhizosphere |
| 114 | 3300049568 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 115 | 3300049569 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 116 | 3300049571 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 117 | 3300049572 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 118 | 3300049573 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 119 | 3300049575 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 120 | 3300049579 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 121 | 3300049580 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 122 | 3300049581 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 123 | 3300049586 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 | Metagenome | Rhizosphere |
| 124 | 3300049589 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 | Metagenome | Rhizosphere |
| 125 | 3300049590 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 | Metagenome | Rhizosphere |
| 126 | 3300049705 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought | Metagenome | Rhizosphere |
| 127 | 3300049742 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 | Metagenome | Rhizosphere |
| 128 | 3300049822 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 129 | 3300049823 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 130 | 3300050493 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation | Metagenome | Endosphere |
| 131 | 3300050507 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation | Metagenome | Rhizosphere |
| 132 | 3300050508 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation | Metagenome | Rhizosphere |
| 133 | 3300050511 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation | Metagenome | Rhizosphere |
| 134 | 3300053086 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere | Metagenome | Endosphere |
| 135 | 3300053090 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere | Metagenome | Endosphere |
| 136 | 3300053092 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere | Metagenome | Endosphere |
| 137 | 3300053096 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere | Metagenome | Endosphere |
| 138 | 3300053156 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere | Metagenome | Endosphere |
| 139 | 3300053727 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 endosphere | Metagenome | Endosphere |
| 140 | 8054307821 | Flavobacterium soyae SCIV07 | Isolate | Rhizosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 93.88 |
| Metatranscriptomes | 0 |
| Isolates | 6.12 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 6.12 |
| Nodule | 0 |
| Rhizoplane | 0 |
| Rhizosphere | 82.65 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 11.22 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | JGI24751J29686_10001558 | 3300002459 | Bacteria | 4737 |
| 2 | rootH2_10065886 | 3300003320 | Bacteria | 3692 |
| 3 | rootL2_10086956 | 3300003322 | Unclassified | 4415 |
| 4 | rootH1_10015969 | 3300003323 | Bacteria | 24001 |
| 5 | Ga0055531_10000061 | 3300003794 | Bacteria | 120535 |
| 6 | Ga0065714_10004070 | 3300005288 | Bacteria | 5723 |
| 7 | Ga0065714_10005304 | 3300005288 | Bacteria | 13203 |
| 8 | Ga0065712_10069493 | 3300005290 | Bacteria | 7187 |
| 9 | Ga0065707_10001765 | 3300005295 | Bacteria | 7089 |
| 10 | Ga0070670_100006244 | 3300005331 | Bacteria | 10083 |
| 11 | Ga0070670_100035462 | 3300005331 | Bacteria | 4294 |
| 12 | Ga0068869_100003371 | 3300005334 | Bacteria | 9754 |
| 13 | Ga0070666_10000096 | 3300005335 | Bacteria | 60717 |
| 14 | Ga0070682_100000012 | 3300005337 | Bacteria | 265658 |
| 15 | Ga0068868_100011898 | 3300005338 | Bacteria | 6345 |
| 16 | Ga0070668_100016015 | 3300005347 | Bacteria | 5610 |
| 17 | Ga0070669_100013851 | 3300005353 | Bacteria | 5732 |
| 18 | Ga0070674_100004107 | 3300005356 | Bacteria | 8268 |
| 19 | Ga0070688_100019846 | 3300005365 | Bacteria | 3899 |
| 20 | Ga0070667_100005379 | 3300005367 | Bacteria | 10694 |
| 21 | Ga0070667_100006079 | 3300005367 | Bacteria | 10023 |
| 22 | Ga0070667_100007657 | 3300005367 | Bacteria | 8955 |
| 23 | Ga0070667_100038213 | 3300005367 | Bacteria | 4025 |
| 24 | Ga0070685_10013241 | 3300005466 | Bacteria | 4346 |
| 25 | Ga0070698_100001103 | 3300005471 | Bacteria | 29751 |
| 26 | Ga0070698_100005820 | 3300005471 | Bacteria | 13489 |
| 27 | Ga0068853_100001106 | 3300005539 | Bacteria | 19090 |
| 28 | Ga0068853_100007096 | 3300005539 | Bacteria | 8964 |
| 29 | Ga0068855_100000052 | 3300005563 | Bacteria | 140781 |
| 30 | Ga0068855_100010889 | 3300005563 | Bacteria | 10978 |
| 31 | Ga0068857_100031579 | 3300005577 | Bacteria | 4681 |
| 32 | Ga0068852_100020537 | 3300005616 | Bacteria | 5254 |
| 33 | Ga0068859_100000024 | 3300005617 | Bacteria | 217931 |
| 34 | Ga0068859_100001975 | 3300005617 | Bacteria | 20936 |
| 35 | Ga0068859_100094157 | 3300005617 | Bacteria | 3048 |
| 36 | Ga0068864_100034549 | 3300005618 | Bacteria | 4301 |
| 37 | Ga0068851_10008518 | 3300005834 | Bacteria | 4745 |
| 38 | Ga0068870_10024299 | 3300005840 | Unclassified | 2997 |
| 39 | Ga0068863_100001190 | 3300005841 | Bacteria | 25980 |
| 40 | Ga0068863_100010789 | 3300005841 | Bacteria | 8863 |
| 41 | Ga0068858_100006210 | 3300005842 | Bacteria | 11646 |
| 42 | Ga0068860_100002751 | 3300005843 | Bacteria | 18299 |
| 43 | Ga0068860_100014891 | 3300005843 | Bacteria | 7604 |
| 44 | Ga0068860_100088441 | 3300005843 | Bacteria | 2949 |
| 45 | Ga0068862_100014540 | 3300005844 | Bacteria | 6533 |
| 46 | Ga0075366_10002042 | 3300006195 | Bacteria | 10244 |
| 47 | Ga0097621_100000092 | 3300006237 | Bacteria | 49439 |
| 48 | Ga0097621_100027885 | 3300006237 | Bacteria | 4447 |
| 49 | Ga0097621_100061651 | 3300006237 | Bacteria | 3076 |
| 50 | Ga0068871_100000032 | 3300006358 | Bacteria | 73078 |
| 51 | Ga0068871_100045941 | 3300006358 | Bacteria | 3516 |
| 52 | Ga0075428_100093200 | 3300006844 | Bacteria | 3283 |
| 53 | Ga0075430_100036782 | 3300006846 | Bacteria | 4150 |
| 54 | Ga0075431_100017161 | 3300006847 | Bacteria | 7358 |
| 55 | Ga0075429_100000261 | 3300006880 | Bacteria | 36762 |
| 56 | Ga0068865_100003717 | 3300006881 | Bacteria | 9162 |
| 57 | Ga0097620_100000024 | 3300006931 | Bacteria | 217931 |
| 58 | Ga0097620_100001975 | 3300006931 | Bacteria | 20936 |
| 59 | Ga0097620_100094163 | 3300006931 | Bacteria | 3048 |
| 60 | Ga0105240_10045955 | 3300009093 | Bacteria | 5536 |
| 61 | Ga0114129_10013112 | 3300009147 | Bacteria | 11805 |
| 62 | Ga0105241_10001926 | 3300009174 | Bacteria | 15701 |
| 63 | Ga0105242_10087831 | 3300009176 | Bacteria | 2611 |
| 64 | Ga0105248_10013398 | 3300009177 | Bacteria | 9025 |
| 65 | Ga0105237_10002413 | 3300009545 | Bacteria | 23210 |
| 66 | Ga0105237_10012055 | 3300009545 | Bacteria | 9131 |
| 67 | Ga0105237_10043231 | 3300009545 | Bacteria | 4540 |
| 68 | Ga0105249_10001205 | 3300009553 | Bacteria | 22829 |
| 69 | Ga0105249_10008815 | 3300009553 | Bacteria | 8807 |
| 70 | Ga0105249_10008966 | 3300009553 | Bacteria | 8738 |
| 71 | Ga0105239_10000009 | 3300010375 | Bacteria | 361182 |
| 72 | Ga0105239_10004005 | 3300010375 | Bacteria | 17844 |
| 73 | Ga0105239_10080464 | 3300010375 | Bacteria | 3584 |
| 74 | Ga0105246_10006042 | 3300011119 | Bacteria | 7392 |
| 75 | Ga0157371_10006742 | 3300013102 | Bacteria | 9390 |
| 76 | Ga0157370_10000860 | 3300013104 | Bacteria | 38540 |
| 77 | Ga0157378_10008163 | 3300013297 | Bacteria | 9137 |
| 78 | Ga0157378_10042409 | 3300013297 | Bacteria | 4039 |
| 79 | Ga0157378_10103200 | 3300013297 | Bacteria | 2605 |
| 80 | Ga0163162_10000153 | 3300013306 | Bacteria | 63805 |
| 81 | Ga0163162_10000431 | 3300013306 | Bacteria | 38724 |
| 82 | Ga0157375_10000253 | 3300013308 | Bacteria | 48558 |
| 83 | Ga0157375_10007578 | 3300013308 | Bacteria | 9491 |
| 84 | Ga0163163_10001380 | 3300014325 | Bacteria | 20505 |
| 85 | Ga0157380_10015856 | 3300014326 | Bacteria | 5544 |
| 86 | Ga0157376_10000714 | 3300014969 | Bacteria | 21474 |
| 87 | Ga0157376_10009584 | 3300014969 | Bacteria | 7042 |
| 88 | Ga0209026_1001072 | 3300025250 | Bacteria | 13229 |
| 89 | Ga0209026_1003049 | 3300025250 | Bacteria | 5751 |
| 90 | Ga0209257_1000006 | 3300025304 | Bacteria | 1570111 |
| 91 | Ga0207682_10003316 | 3300025893 | Bacteria | 7028 |
| 92 | Ga0207680_10000048 | 3300025903 | Bacteria | 58651 |
| 93 | Ga0207645_10000679 | 3300025907 | Bacteria | 28194 |
| 94 | Ga0207654_10000365 | 3300025911 | Bacteria | 26713 |
| 95 | Ga0207695_10039658 | 3300025913 | Bacteria | 5059 |
| 96 | Ga0207671_10000971 | 3300025914 | Bacteria | 35525 |
| 97 | Ga0207681_10028680 | 3300025923 | Bacteria | 3608 |
| 98 | Ga0207659_10074415 | 3300025926 | Bacteria | 2489 |
| 99 | Ga0207686_10001171 | 3300025934 | Bacteria | 15161 |
| 100 | Ga0207670_10030718 | 3300025936 | Unclassified | 3434 |
| 101 | Ga0207691_10005620 | 3300025940 | Bacteria | 12116 |
| 102 | Ga0207689_10001968 | 3300025942 | Bacteria | 19400 |
| 103 | Ga0207689_10054623 | 3300025942 | Bacteria | 3289 |
| 104 | Ga0207667_10000039 | 3300025949 | Bacteria | 278843 |
| 105 | Ga0207667_10056143 | 3300025949 | Bacteria | 4137 |
| 106 | Ga0207712_10001208 | 3300025961 | Bacteria | 17848 |
| 107 | Ga0207712_10059434 | 3300025961 | Bacteria | 2706 |
| 108 | Ga0207658_10010371 | 3300025986 | Bacteria | 6330 |
| 109 | Ga0207703_10002984 | 3300026035 | Bacteria | 14346 |
| 110 | Ga0207639_10012767 | 3300026041 | Bacteria | 5860 |
| 111 | Ga0207639_10019560 | 3300026041 | Bacteria | 4831 |
| 112 | Ga0207708_10078169 | 3300026075 | Bacteria | 2540 |
| 113 | Ga0207641_10000844 | 3300026088 | Bacteria | 32550 |
| 114 | Ga0207641_10000928 | 3300026088 | Bacteria | 30254 |
| 115 | Ga0207641_10092037 | 3300026088 | Bacteria | 2655 |
| 116 | Ga0207674_10042617 | 3300026116 | Bacteria | 4686 |
| 117 | Ga0207675_100065495 | 3300026118 | Bacteria | 3396 |
| 118 | Ga0268264_10001286 | 3300028381 | Bacteria | 23701 |
| 119 | Ga0268264_10033407 | 3300028381 | Bacteria | 4226 |
| 120 | Ga0307517_10001242 | 3300028786 | Bacteria | 42752 |
| 121 | Ga0307515_10000001 | 3300028794 | Bacteria | 4259510 |
| 122 | Ga0307515_10000059 | 3300028794 | Bacteria | 257520 |
| 123 | Ga0307515_10000094 | 3300028794 | Bacteria | 210723 |
| 124 | Ga0307515_10054346 | 3300028794 | Bacteria | 5881 |
| 125 | Ga0307515_10114118 | 3300028794 | Bacteria | 3126 |
| 126 | Ga0265338_10021767 | 3300028800 | Bacteria | 6666 |
| 127 | Ga0265327_10000013 | 3300031251 | Bacteria | 519549 |
| 128 | Ga0265327_10002389 | 3300031251 | Bacteria | 19924 |
| 129 | Ga0265327_10017420 | 3300031251 | Bacteria | 4509 |
| 130 | Ga0307513_10023174 | 3300031456 | Bacteria | 7262 |
| 131 | Ga0307509_10016096 | 3300031507 | Bacteria | 8670 |
| 132 | Ga0307509_10123292 | 3300031507 | Unclassified | 2564 |
| 133 | Ga0307508_10000111 | 3300031616 | Bacteria | 96733 |
| 134 | Ga0307414_10024175 | 3300032004 | Bacteria | 3869 |
| 135 | Ga0307510_10040825 | 3300033180 | Bacteria | 5084 |
| 136 | Ga0373927_0014227 | 3300035695 | Bacteria | 5276 |
| 137 | Ga0373927_0045419 | 3300035695 | Bacteria | 2842 |
| 138 | Ga0466969_0000453 | 3300044656 | Bacteria | 22543 |
| 139 | Ga0466972_0000080 | 3300044658 | Bacteria | 89226 |
| 140 | Ga0466972_0030611 | 3300044658 | Bacteria | 2649 |
| 141 | Ga0466966_0000096 | 3300044684 | Bacteria | 54307 |
| 142 | Ga0453684_0068026 | 3300044712 | Bacteria | 4525 |
| 143 | Ga0466968_0014203 | 3300044735 | Bacteria | 3144 |
| 144 | Ga0466957_0001278 | 3300044842 | Bacteria | 13115 |
| 145 | Ga0466959_0000014 | 3300045049 | Bacteria | 150962 |
| 146 | Ga0495606_0012616 | 3300046507 | Bacteria | 6755 |
| 147 | Ga0495668_0003219 | 3300046616 | Bacteria | 12457 |
| 148 | Ga0495672_0006410 | 3300047320 | Bacteria | 9130 |
| 149 | Ga0501031_0007013 | 3300049568 | Bacteria | 7355 |
| 150 | Ga0501032_0007737 | 3300049569 | Bacteria | 7833 |
| 151 | Ga0501034_0011131 | 3300049571 | Bacteria | 9337 |
| 152 | Ga0501034_0019703 | 3300049571 | Bacteria | 6896 |
| 153 | Ga0501034_0036128 | 3300049571 | Bacteria | 5008 |
| 154 | Ga0501036_0000845 | 3300049572 | Bacteria | 22806 |
| 155 | Ga0501036_0062749 | 3300049572 | Unclassified | 3147 |
| 156 | Ga0501037_0013240 | 3300049573 | Bacteria | 6077 |
| 157 | Ga0501039_0016366 | 3300049575 | Bacteria | 5683 |
| 158 | Ga0501043_0005938 | 3300049579 | Bacteria | 9820 |
| 159 | Ga0501043_0016813 | 3300049579 | Bacteria | 5733 |
| 160 | Ga0501046_0002016 | 3300049580 | Bacteria | 19283 |
| 161 | Ga0501047_0006711 | 3300049581 | Bacteria | 10821 |
| 162 | Ga0501070_0003721 | 3300049586 | Bacteria | 13173 |
| 163 | Ga0501073_0002289 | 3300049589 | Bacteria | 14321 |
| 164 | Ga0501074_0000310 | 3300049590 | Bacteria | 28251 |
| 165 | Ga0501225_0002369 | 3300049705 | Bacteria | 5813 |
| 166 | Ga0501080_0014194 | 3300049742 | Bacteria | 7333 |
| 167 | Ga0501035_0001685 | 3300049822 | Bacteria | 22357 |
| 168 | Ga0501044_0001606 | 3300049823 | Bacteria | 26442 |
| 169 | Ga0501044_0010226 | 3300049823 | Bacteria | 10190 |
| 170 | Ga0501044_0010605 | 3300049823 | Bacteria | 9997 |
| 171 | Ga0501044_0010826 | 3300049823 | Bacteria | 9896 |
| 172 | Ga0501044_0056815 | 3300049823 | Bacteria | 4018 |
| 173 | nmdc:mga0k408_853_c1 | 3300050493 | Bacteria | 16768 |
| 174 | nmdc:mga05p37_3268_c1 | 3300050507 | Bacteria | 18878 |
| 175 | nmdc:mga09592_132605_c1 | 3300050508 | Bacteria | 2145 |
| 176 | nmdc:mga08y16_121247_c1 | 3300050511 | Unclassified | 2721 |
| 177 | Ga0500578_0000325 | 3300053086 | Bacteria | 58251 |
| 178 | Ga0500578_0015712 | 3300053086 | Bacteria | 4860 |
| 179 | Ga0500646_0004945 | 3300053090 | Bacteria | 3382 |
| 180 | Ga0500583_0000001 | 3300053092 | Bacteria | 241642 |
| 181 | Ga0500641_0000003 | 3300053096 | Bacteria | 284831 |
| 182 | Ga0500641_0000086 | 3300053096 | Bacteria | 37170 |
| 183 | Ga0500622_0000527 | 3300053156 | Bacteria | 35443 |
| 184 | Ga0500611_000003 | 3300053727 | Bacteria | 333431 |
Family Sequences
| Sample | Scaffold | Protein | Protein Length | |
|---|---|---|---|---|
| 1 | 3300050508 | nmdc:mga09592_132605_c1 | nmdc:mga09592_132605_c1_27_1973 | 646 |
| 2 | 3300028800 | Ga0265338_10021767 | Ga0265338_100217674 | 667 |
| 3 | 3300031456 | Ga0307513_10023174 | Ga0307513_100231742 | 669 |
| 4 | 3300005834 | Ga0068851_10008518 | Ga0068851_100085182 | 690 |
| 5 | 3300031507 | Ga0307509_10016096 | Ga0307509_100160968 | 690 |
| 6 | 3300014325 | Ga0163163_10001380 | Ga0163163_100013805 | 692 |
| 7 | 3300005367 | Ga0070667_100006079 | Ga0070667_1000060793 | 694 |
| 8 | 3300006237 | Ga0097621_100000092 | Ga0097621_10000009213 | 694 |
| 9 | 3300006358 | Ga0068871_100000032 | Ga0068871_10000003243 | 694 |
| 10 | 3300009177 | Ga0105248_10013398 | Ga0105248_100133982 | 694 |
| 11 | 3300013306 | Ga0163162_10000431 | Ga0163162_1000043126 | 694 |
| 12 | 3300013308 | Ga0157375_10000253 | Ga0157375_1000025317 | 694 |
| 13 | 3300014969 | Ga0157376_10000714 | Ga0157376_100007149 | 694 |
| 14 | 3300044712 | Ga0453684_0068026 | Ga0453684_0068026_1566_3761 | 703 |
| 15 | 3300028794 | Ga0307515_10114118 | Ga0307515_101141182 | 707 |
| 16 | 3300053096 | Ga0500641_0000086 | Ga0500641_0000086_23932_26133 | 707 |
| 17 | 3300005288 | Ga0065714_10005304 | Ga0065714_100053045 | 708 |
| 18 | 3300053090 | Ga0500646_0004945 | Ga0500646_0004945_396_2594 | 708 |
| 19 | 3300053096 | Ga0500641_0000003 | Ga0500641_0000003_201409_203607 | 708 |
| 20 | 3300005288 | Ga0065714_10004070 | Ga0065714_100040704 | 709 |
| 21 | 3300009093 | Ga0105240_10045955 | Ga0105240_100459553 | 709 |
| 22 | 3300025913 | Ga0207695_10039658 | Ga0207695_100396585 | 709 |
| 23 | 3300032004 | Ga0307414_10024175 | Ga0307414_100241752 | 711 |
| 24 | 3300006881 | Ga0068865_100003717 | Ga0068865_1000037172 | 712 |
| 25 | 3300025907 | Ga0207645_10000679 | Ga0207645_100006793 | 712 |
| 26 | 3300025926 | Ga0207659_10074415 | Ga0207659_100744151 | 712 |
| 27 | 3300025940 | Ga0207691_10005620 | Ga0207691_100056205 | 712 |
| 28 | 3300005844 | Ga0068862_100014540 | Ga0068862_1000145403 | 714 |
| 29 | 3300049705 | Ga0501225_0002369 | Ga0501225_0002369_3570_5729 | 716 |
| 30 | iso_pu_bacteria | 2839989709 | 2839990904 | 716 |
| 31 | 3300005563 | Ga0068855_100000052 | Ga0068855_1000000522 | 717 |
| 32 | 3300006195 | Ga0075366_10002042 | Ga0075366_1000204210 | 717 |
| 33 | 3300009545 | Ga0105237_10002413 | Ga0105237_100024133 | 717 |
| 34 | 3300010375 | Ga0105239_10000009 | Ga0105239_10000009127 | 717 |
| 35 | 3300025949 | Ga0207667_10000039 | Ga0207667_10000039137 | 717 |
| 36 | 3300031507 | Ga0307509_10123292 | Ga0307509_101232922 | 717 |
| 37 | 3300046507 | Ga0495606_0012616 | Ga0495606_0012616_257_2446 | 717 |
| 38 | 3300050493 | nmdc:mga0k408_853_c1 | nmdc:mga0k408_853_c1_3718_5901 | 717 |
| 39 | 3300053156 | Ga0500622_0000527 | Ga0500622_0000527_33153_35348 | 717 |
| 40 | 3300003794 | Ga0055531_10000061 | Ga0055531_1000006112 | 718 |
| 41 | 3300025304 | Ga0209257_1000006 | Ga0209257_1000006243 | 718 |
| 42 | 3300031616 | Ga0307508_10000111 | Ga0307508_1000011151 | 718 |
| 43 | iso_pu_bacteria | 2738541278 | 2738725465 | 718 |
| 44 | 3300005295 | Ga0065707_10001765 | Ga0065707_100017653 | 719 |
| 45 | 3300005471 | Ga0070698_100005820 | Ga0070698_1000058205 | 719 |
| 46 | 3300005841 | Ga0068863_100010789 | Ga0068863_1000107899 | 719 |
| 47 | 3300013297 | Ga0157378_10103200 | Ga0157378_101032002 | 719 |
| 48 | 3300025250 | Ga0209026_1001072 | Ga0209026_10010726 | 719 |
| 49 | 3300025250 | Ga0209026_1003049 | Ga0209026_10030492 | 719 |
| 50 | 3300026088 | Ga0207641_10000928 | Ga0207641_100009287 | 719 |
| 51 | 3300028786 | Ga0307517_10001242 | Ga0307517_100012427 | 719 |
| 52 | 3300044658 | Ga0466972_0000080 | Ga0466972_0000080_20060_22240 | 719 |
| 53 | iso_pu_bacteria | 2910245624 | 2910247216 | 719 |
| 54 | 3300013104 | Ga0157370_10000860 | Ga0157370_1000086035 | 720 |
| 55 | 3300035695 | Ga0373927_0014227 | Ga0373927_0014227_1830_4037 | 720 |
| 56 | 3300046616 | Ga0495668_0003219 | Ga0495668_0003219_833_3001 | 720 |
| 57 | iso_pu_bacteria | 2902048731 | 2902051934 | 720 |
| 58 | 3300005337 | Ga0070682_100000012 | Ga0070682_10000001289 | 721 |
| 59 | 3300005338 | Ga0068868_100011898 | Ga0068868_1000118982 | 721 |
| 60 | 3300013297 | Ga0157378_10008163 | Ga0157378_100081633 | 721 |
| 61 | 3300044842 | Ga0466957_0001278 | Ga0466957_0001278_233_2410 | 721 |
| 62 | 3300049569 | Ga0501032_0007737 | Ga0501032_0007737_2045_4231 | 721 |
| 63 | 3300049571 | Ga0501034_0011131 | Ga0501034_0011131_1198_3384 | 721 |
| 64 | 3300049572 | Ga0501036_0000845 | Ga0501036_0000845_12692_14878 | 721 |
| 65 | 3300049575 | Ga0501039_0016366 | Ga0501039_0016366_2054_4240 | 721 |
| 66 | 3300049579 | Ga0501043_0005938 | Ga0501043_0005938_1198_3384 | 721 |
| 67 | 3300049580 | Ga0501046_0002016 | Ga0501046_0002016_2676_4862 | 721 |
| 68 | 3300049581 | Ga0501047_0006711 | Ga0501047_0006711_2493_4679 | 721 |
| 69 | 3300049586 | Ga0501070_0003721 | Ga0501070_0003721_1403_3589 | 721 |
| 70 | 3300049589 | Ga0501073_0002289 | Ga0501073_0002289_2395_4581 | 721 |
| 71 | 3300049590 | Ga0501074_0000310 | Ga0501074_0000310_15662_17848 | 721 |
| 72 | 3300049742 | Ga0501080_0014194 | Ga0501080_0014194_2533_4719 | 721 |
| 73 | 3300049822 | Ga0501035_0001685 | Ga0501035_0001685_5503_7689 | 721 |
| 74 | 3300049823 | Ga0501044_0001606 | Ga0501044_0001606_14645_16831 | 721 |
| 75 | 3300049823 | Ga0501044_0056815 | Ga0501044_0056815_574_2772 | 721 |
| 76 | 3300003320 | rootH2_10065886 | rootH2_100658862 | 722 |
| 77 | 3300005539 | Ga0068853_100007096 | Ga0068853_1000070962 | 722 |
| 78 | 3300006844 | Ga0075428_100093200 | Ga0075428_1000932002 | 722 |
| 79 | 3300006880 | Ga0075429_100000261 | Ga0075429_10000026125 | 722 |
| 80 | 3300013102 | Ga0157371_10006742 | Ga0157371_100067428 | 722 |
| 81 | 3300026041 | Ga0207639_10012767 | Ga0207639_100127674 | 722 |
| 82 | 3300028794 | Ga0307515_10000059 | Ga0307515_1000005932 | 722 |
| 83 | 3300028794 | Ga0307515_10000094 | Ga0307515_10000094135 | 722 |
| 84 | 3300003322 | rootL2_10086956 | rootL2_100869563 | 723 |
| 85 | 3300003323 | rootH1_10015969 | rootH1_100159698 | 723 |
| 86 | 3300025893 | Ga0207682_10003316 | Ga0207682_100033163 | 723 |
| 87 | 3300028794 | Ga0307515_10054346 | Ga0307515_100543463 | 723 |
| 88 | 3300044656 | Ga0466969_0000453 | Ga0466969_0000453_11145_13322 | 723 |
| 89 | 3300049571 | Ga0501034_0019703 | Ga0501034_0019703_271_2451 | 723 |
| 90 | 3300049571 | Ga0501034_0036128 | Ga0501034_0036128_1958_4135 | 723 |
| 91 | 3300049823 | Ga0501044_0010605 | Ga0501044_0010605_7661_9838 | 723 |
| 92 | 3300049823 | Ga0501044_0010826 | Ga0501044_0010826_2013_4190 | 723 |
| 93 | 3300053086 | Ga0500578_0000325 | Ga0500578_0000325_35613_37790 | 723 |
| 94 | 3300053086 | Ga0500578_0015712 | Ga0500578_0015712_86_2263 | 723 |
| 95 | 3300005539 | Ga0068853_100001106 | Ga0068853_10000110621 | 724 |
| 96 | 3300005563 | Ga0068855_100010889 | Ga0068855_1000108892 | 724 |
| 97 | 3300009147 | Ga0114129_10013112 | Ga0114129_1001311212 | 724 |
| 98 | 3300009545 | Ga0105237_10043231 | Ga0105237_100432312 | 724 |
| 99 | 3300010375 | Ga0105239_10004005 | Ga0105239_1000400515 | 724 |
| 100 | 3300025949 | Ga0207667_10056143 | Ga0207667_100561432 | 724 |
| 101 | 3300025961 | Ga0207712_10059434 | Ga0207712_100594342 | 724 |
| 102 | 3300026041 | Ga0207639_10019560 | Ga0207639_100195604 | 724 |
| 103 | 3300028794 | Ga0307515_10000001 | Ga0307515_100000012607 | 724 |
| 104 | 3300031251 | Ga0265327_10002389 | Ga0265327_1000238917 | 724 |
| 105 | 3300031251 | Ga0265327_10017420 | Ga0265327_100174203 | 724 |
| 106 | 3300044658 | Ga0466972_0030611 | Ga0466972_0030611_225_2408 | 724 |
| 107 | 3300044684 | Ga0466966_0000096 | Ga0466966_0000096_29379_31559 | 724 |
| 108 | 3300044735 | Ga0466968_0014203 | Ga0466968_0014203_26_2206 | 724 |
| 109 | 3300045049 | Ga0466959_0000014 | Ga0466959_0000014_33577_35757 | 724 |
| 110 | 3300047320 | Ga0495672_0006410 | Ga0495672_0006410_3195_5378 | 724 |
| 111 | 3300049823 | Ga0501044_0010226 | Ga0501044_0010226_7262_9445 | 724 |
| 112 | 3300050507 | nmdc:mga05p37_3268_c1 | nmdc:mga05p37_3268_c1_15953_18133 | 724 |
| 113 | 3300053092 | Ga0500583_0000001 | Ga0500583_0000001_24305_26485 | 724 |
| 114 | iso_pu_bacteria | 2643221600 | 2644010067 | 724 |
| 115 | iso_pu_bacteria | 2643221716 | 2644640360 | 724 |
| 116 | iso_pu_bacteria | 2919191525 | 2919191821 | 724 |
| 117 | iso_pu_bacteria | 8054307821 | 8054309420 | 724 |
| 118 | 3300005334 | Ga0068869_100003371 | Ga0068869_1000033712 | 725 |
| 119 | 3300005335 | Ga0070666_10000096 | Ga0070666_1000009651 | 725 |
| 120 | 3300005347 | Ga0070668_100016015 | Ga0070668_1000160154 | 725 |
| 121 | 3300005356 | Ga0070674_100004107 | Ga0070674_1000041072 | 725 |
| 122 | 3300005367 | Ga0070667_100005379 | Ga0070667_1000053792 | 725 |
| 123 | 3300005367 | Ga0070667_100007657 | Ga0070667_1000076574 | 725 |
| 124 | 3300005367 | Ga0070667_100038213 | Ga0070667_1000382132 | 725 |
| 125 | 3300005616 | Ga0068852_100020537 | Ga0068852_1000205375 | 725 |
| 126 | 3300005617 | Ga0068859_100000024 | Ga0068859_100000024120 | 725 |
| 127 | 3300005841 | Ga0068863_100001190 | Ga0068863_1000011906 | 725 |
| 128 | 3300005842 | Ga0068858_100006210 | Ga0068858_1000062105 | 725 |
| 129 | 3300005843 | Ga0068860_100002751 | Ga0068860_1000027514 | 725 |
| 130 | 3300005843 | Ga0068860_100014891 | Ga0068860_1000148914 | 725 |
| 131 | 3300005843 | Ga0068860_100088441 | Ga0068860_1000884412 | 725 |
| 132 | 3300006237 | Ga0097621_100027885 | Ga0097621_1000278852 | 725 |
| 133 | 3300006931 | Ga0097620_100000024 | Ga0097620_100000024120 | 725 |
| 134 | 3300009174 | Ga0105241_10001926 | Ga0105241_1000192611 | 725 |
| 135 | 3300009545 | Ga0105237_10012055 | Ga0105237_100120552 | 725 |
| 136 | 3300009553 | Ga0105249_10008966 | Ga0105249_100089666 | 725 |
| 137 | 3300010375 | Ga0105239_10080464 | Ga0105239_100804641 | 725 |
| 138 | 3300011119 | Ga0105246_10006042 | Ga0105246_100060426 | 725 |
| 139 | 3300013297 | Ga0157378_10042409 | Ga0157378_100424092 | 725 |
| 140 | 3300013306 | Ga0163162_10000153 | Ga0163162_1000015339 | 725 |
| 141 | 3300014326 | Ga0157380_10015856 | Ga0157380_100158562 | 725 |
| 142 | 3300014969 | Ga0157376_10009584 | Ga0157376_100095844 | 725 |
| 143 | 3300025903 | Ga0207680_10000048 | Ga0207680_1000004848 | 725 |
| 144 | 3300025911 | Ga0207654_10000365 | Ga0207654_100003652 | 725 |
| 145 | 3300025914 | Ga0207671_10000971 | Ga0207671_1000097136 | 725 |
| 146 | 3300025942 | Ga0207689_10001968 | Ga0207689_1000196818 | 725 |
| 147 | 3300025942 | Ga0207689_10054623 | Ga0207689_100546232 | 725 |
| 148 | 3300025986 | Ga0207658_10010371 | Ga0207658_100103712 | 725 |
| 149 | 3300026035 | Ga0207703_10002984 | Ga0207703_100029846 | 725 |
| 150 | 3300026088 | Ga0207641_10000844 | Ga0207641_100008448 | 725 |
| 151 | 3300026088 | Ga0207641_10092037 | Ga0207641_100920371 | 725 |
| 152 | 3300028381 | Ga0268264_10001286 | Ga0268264_1000128616 | 725 |
| 153 | 3300028381 | Ga0268264_10033407 | Ga0268264_100334072 | 725 |
| 154 | 3300031251 | Ga0265327_10000013 | Ga0265327_10000013432 | 725 |
| 155 | 3300033180 | Ga0307510_10040825 | Ga0307510_100408253 | 725 |
| 156 | 3300035695 | Ga0373927_0045419 | Ga0373927_0045419_36_2228 | 725 |
| 157 | iso_pu_bacteria | 2513020052 | 2513234253 | 725 |
| 158 | iso_pu_bacteria | 2643221667 | 2644373412 | 725 |
| 159 | iso_pu_bacteria | 2904555929 | 2904560249 | 725 |
| 160 | iso_pu_bacteria | 2929150217 | 2929154445 | 725 |
| 161 | 3300005290 | Ga0065712_10069493 | Ga0065712_100694931 | 726 |
| 162 | 3300005331 | Ga0070670_100035462 | Ga0070670_1000354622 | 726 |
| 163 | 3300005353 | Ga0070669_100013851 | Ga0070669_1000138515 | 726 |
| 164 | 3300005365 | Ga0070688_100019846 | Ga0070688_1000198462 | 726 |
| 165 | 3300005466 | Ga0070685_10013241 | Ga0070685_100132413 | 726 |
| 166 | 3300005471 | Ga0070698_100001103 | Ga0070698_1000011033 | 726 |
| 167 | 3300005617 | Ga0068859_100094157 | Ga0068859_1000941572 | 726 |
| 168 | 3300005618 | Ga0068864_100034549 | Ga0068864_1000345492 | 726 |
| 169 | 3300005840 | Ga0068870_10024299 | Ga0068870_100242992 | 726 |
| 170 | 3300006237 | Ga0097621_100061651 | Ga0097621_1000616513 | 726 |
| 171 | 3300006358 | Ga0068871_100045941 | Ga0068871_1000459413 | 726 |
| 172 | 3300006846 | Ga0075430_100036782 | Ga0075430_1000367823 | 726 |
| 173 | 3300006847 | Ga0075431_100017161 | Ga0075431_1000171616 | 726 |
| 174 | 3300006931 | Ga0097620_100094163 | Ga0097620_1000941632 | 726 |
| 175 | 3300009176 | Ga0105242_10087831 | Ga0105242_100878311 | 726 |
| 176 | 3300009553 | Ga0105249_10008815 | Ga0105249_100088156 | 726 |
| 177 | 3300013308 | Ga0157375_10007578 | Ga0157375_100075783 | 726 |
| 178 | 3300025923 | Ga0207681_10028680 | Ga0207681_100286803 | 726 |
| 179 | 3300025934 | Ga0207686_10001171 | Ga0207686_1000117112 | 726 |
| 180 | 3300025936 | Ga0207670_10030718 | Ga0207670_100307182 | 726 |
| 181 | 3300025961 | Ga0207712_10001208 | Ga0207712_100012087 | 726 |
| 182 | 3300026075 | Ga0207708_10078169 | Ga0207708_100781692 | 726 |
| 183 | 3300026118 | Ga0207675_100065495 | Ga0207675_1000654951 | 726 |
| 184 | 3300049568 | Ga0501031_0007013 | Ga0501031_0007013_3876_6059 | 726 |
| 185 | 3300049572 | Ga0501036_0062749 | Ga0501036_0062749_736_2919 | 726 |
| 186 | 3300049573 | Ga0501037_0013240 | Ga0501037_0013240_1333_3516 | 726 |
| 187 | 3300049579 | Ga0501043_0016813 | Ga0501043_0016813_2389_4572 | 726 |
| 188 | 3300053727 | Ga0500611_000003 | Ga0500611_000003_211028_213220 | 726 |
| 189 | 3300005617 | Ga0068859_100001975 | Ga0068859_1000019755 | 727 |
| 190 | 3300006931 | Ga0097620_100001975 | Ga0097620_1000019755 | 727 |
| 191 | 3300050511 | nmdc:mga08y16_121247_c1 | nmdc:mga08y16_121247_c1_168_2393 | 733 |
| 192 | 3300002459 | JGI24751J29686_10001558 | JGI24751J29686_100015583 | 734 |
| 193 | 3300005331 | Ga0070670_100006244 | Ga0070670_1000062448 | 734 |
| 194 | 3300005577 | Ga0068857_100031579 | Ga0068857_1000315793 | 734 |
| 195 | 3300009553 | Ga0105249_10001205 | Ga0105249_1000120515 | 734 |
| 196 | 3300026116 | Ga0207674_10042617 | Ga0207674_100426173 | 734 |
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 1cp9-assembly1.cif.gz_A | crystal structure of penicillin g acylase from the bro1 mutant strain of providencia rettgeri | 0.8864 | 34 | 152 |
| 4e56-assembly1.cif.gz_A | crystal structure of spacer 8aa-shortened cephalosporin acylase mutant | 0.8724 | 32 | 731 |
| 4e55-assembly1.cif.gz_A | crystal structure of spacer removed cephalosporin acylase mutant | 0.8723 | 32 | 731 |
| 1or0-assembly2.cif.gz_D | crystal structures of glutaryl 7-aminocephalosporanic acid acylase: insight into autoproteolytic activation | 0.8712 | 195 | 728 |
| 2ae3-assembly1.cif.gz_A | glutaryl 7-aminocephalosporanic acid acylase: mutational study of activation mechanism | 0.8697 | 36 | 149 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| 1oqzA01 | Alpha Beta;4-Layer Sandwich;Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1;Aminohydrolase, N-terminal nucleophile (Ntn) domain | 0.8843 | 34 | 724 | 3.60.20.10 |
| 2hzxC01 | Alpha Beta;4-Layer Sandwich;Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1;Aminohydrolase, N-terminal nucleophile (Ntn) domain | 0.8802 | 220 | 463 | 3.60.20.10 |
| 4wktA00 | Mainly Alpha;Orthogonal Bundle;Penicillin Amidohydrolase; domain 1;Penicillin Amidohydrolase, domain 1 | 0.8728 | 34 | 152 | 1.10.439.10 |
| 1gk1B01 | Alpha Beta;4-Layer Sandwich;Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1;Aminohydrolase, N-terminal nucleophile (Ntn) domain | 0.8676 | 195 | 720 | 3.60.20.10 |
| 1gk1B01 | Alpha Beta;4-Layer Sandwich;Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1;Aminohydrolase, N-terminal nucleophile (Ntn) domain | 0.858 | 195 | 720 | 3.60.20.10 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A4R5FKH1-F1-model_v4 | Acylase | 0.9819 | 15 | 734 |
GO:0016811
GO:0017000 GO:0046872 |
| AF-A0A519TK25-F1-model_v4 | Acylase | 0.9802 | 14 | 483 |
GO:0016811
GO:0017000 |
| AF-A0A4R5FKH1-F1-model_v4 | Acylase | 0.9792 | 15 | 734 |
GO:0016811
GO:0017000 GO:0046872 |
| AF-A0A162N7C2-F1-model_v4 | Penicillin amidase | 0.9774 | 72 | 734 |
GO:0016811
GO:0017000 GO:0046872 |
| AF-A0A162N7C2-F1-model_v4 | Penicillin amidase | 0.9759 | 72 | 734 |
GO:0016811
GO:0017000 GO:0046872 |
Predicted Structure (AlphaFold2)
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