F300318

General Info

Members Datasets Scaffolds Average Seq Length
195 166 391 380

Family's Representative Sequence

Representative Sequence 3300031731|Ga0307405_10033180|Ga0307405_100331802
Length 393
Sequence MRILHTSDWHVGKVLKGRGRHDEHIRVLAQVVEIARAERPDLVIIAGDLYDTAAPTADATRVVTRALSALRQTGAQVVAIGGNHDNGPALDALRPWAEAAGIVLRGAVRDKADELLITGETAGGEKWQLVTLPFLSQRYAIRAAEMYELTAAEASQTYADHIARLIERLSDKFDQPGVINLLTAHLTIVGASAGGGEREAHTIMGYAVPATVFPRNAHYVALGHLHRAQQVISPCPTRYSGSPLAVDFGEEENISSVAIVDVAVDKAARVRDVPITGAIALRTVRGTLEQLATVNLPDAWLRVLVREKPRVGLREDVQELLPNALEVRIDPEMMPDRAGERMAQRAGRSPRELFGDYLDSRDNADDGVRELFDELYDEVSTVGSGSERSGARS

Samples

Sample ID Description Type Environment
1 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
2 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
3 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
4 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
5 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
6 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
7 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
8 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
9 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
10 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
11 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
12 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
13 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
14 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
15 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
16 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
17 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
18 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
19 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
20 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
21 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
22 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
23 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
24 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
25 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
26 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
27 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
28 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
29 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
30 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
31 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
32 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
33 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
34 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
35 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
36 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
37 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
38 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
39 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
40 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
41 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
66 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
67 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
68 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
69 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
70 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
71 3300031889 Wild Oat associated soil bacterial communities from Lone Jack Road, Encinitas, CA, USA - WO Metagenome Rhizosphere
72 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
73 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
74 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
75 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
76 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
77 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
78 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
79 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
80 3300035207 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 Metagenome Rhizosphere
81 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
82 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
83 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
84 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
85 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
86 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
87 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
88 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
89 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
90 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
91 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
92 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
93 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
94 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
95 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
96 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
97 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
98 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
99 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
100 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
101 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
102 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
103 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
104 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
105 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
106 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
107 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
108 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
109 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
110 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
111 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
112 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
113 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
114 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
115 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
116 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
117 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
118 3300053149 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 endosphere Metagenome Endosphere
119 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
120 2501939600 Micromonospora sp. L5 Isolate Unclassified
121 2515154088 Salinispora arenicola CNT800 Isolate Rhizosphere
122 2515154129 Salinispora pacifica CNS103 Isolate Rhizosphere
123 2515154137 Salinispora arenicola CNX482 Isolate Rhizosphere
124 2515154202 Salinispora pacifica CNT084 Isolate Rhizosphere
125 2515154203 Salinispora arenicola CNR921 Isolate Rhizosphere
126 2622736626 Micromonospora rhizosphaerae DSM 45431 Isolate Rhizosphere
127 2675903059 Asanoa hainanensis CGMCC 4.5593 Isolate Rhizosphere
128 2751185782 Actinoplanes subtropicus NRRL B-24665 Isolate Rhizosphere
129 2772190715 Micromonospora chokoriensis NRRL B-24750 Isolate Unclassified
130 2831935698 Jishengella sp. AZ1-13 Isolate Unclassified
131 2832004796 Micromonospora endophytica JCM 18317 Isolate Unclassified
132 2855670206 Micromonospora noduli Lupac 07 Isolate Nodule
133 2855676851 Micromonospora saelicesensis GAR05 Isolate Unclassified
134 2855683550 Micromonospora sp. RP3T Isolate Unclassified
135 2856858025 Micromonospora aurantiaca 110B(2018) Isolate Unclassified
136 2857288857 Micromonospora noduli ONO23 Isolate Unclassified
137 2858848962 Micromonospora saelicesensis GAR06 Isolate Unclassified
138 2858868258 Micromonospora sp. MH33 Isolate Unclassified
139 2858882152 Micromonospora noduli MED15 Isolate Nodule
140 2858888857 Micromonospora saelicesensis Lupac 06 Isolate Unclassified
141 2858895516 Micromonospora saelicesensis PSN13 Isolate Unclassified
142 2858902515 Micromonospora sp. MW-13 Isolate Rhizosphere
143 2866065130 Micromonospora endophytica DSM 45430 Isolate Unclassified
144 2867302475 Micromonospora globbae WPS1-2 Isolate Unclassified
145 2867312974 Micromonospora musae NGC1-4 Isolate Unclassified
146 2867319477 Micromonospora musae MS1-9 Isolate Unclassified
147 2867507094 Micromonospora zingiberis PLAI 1-1 Isolate Unclassified
148 2869048445 Micromonospora saelicesensis PSN01 Isolate Unclassified
149 2869061728 Micromonospora noduli ONO86 Isolate Unclassified
150 2869068681 Micromonospora noduli GUI43 Isolate Unclassified
151 2880489317 Micromonospora ureilytica DSM 101692 Isolate Unclassified
152 2880495981 Micromonospora vinacea DSM 101695 Isolate Unclassified
153 2887478801 Catellatospora paridis NEAU-CL2 Isolate Rhizosphere
154 2902582711 Micromonospora sp. AP08 Isolate Unclassified
155 2929219909 Micromonospora sp. R-75348 Hybrid assembly Isolate Unclassified
156 2929226422 Micromonospora sp. R-74116 Hybrid assembly Isolate Unclassified
157 2996221748 Micromonospora veneta CAP181 Isolate Unclassified
158 649633069 Micromonospora sp. L5 Isolate Unclassified
159 8001781756 Catellatospora tritici NEAU-YM18 Isolate Rhizosphere
160 8003830390 Micromonospora parastrephiae STR1_7 Isolate Rhizosphere
161 8003856774 Micromonospora echinofusca MPMI6 Isolate Unclassified
162 8003870546 Micromonospora tarensis STR1s_6 Isolate Rhizosphere
163 8054704163 Micromonospora trifolii NIE79 Isolate Nodule
164 8054727385 Micromonospora alfalfae MED01 Isolate Nodule
165 8054734606 Micromonospora hortensis NIE111 Isolate Nodule
166 8055412473 Micromonospora phytophila DSM 105363 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 75.38
Metatranscriptomes 0.51
Isolates 24.1

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.56
Nodule 3.08
Rhizoplane 2.05
Rhizosphere 70.77
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0307405_10033180 3300031731 Bacteria 3059
2 rootH1_10010972 3300003316 Bacteria 1661
3 rootH1_10010972 3300003323 Bacteria 8914
4 rootH2_10009466 3300003320 Bacteria 1312
5 Ga0070658_10002448 3300005327 Bacteria 15528
6 Ga0070683_100089017 3300005329 Bacteria 2897
7 Ga0070683_100230578 3300005329 Bacteria 1760
8 Ga0070680_100025888 3300005336 Bacteria 4691
9 Ga0070661_100012066 3300005344 Bacteria 6038
10 Ga0070661_100015162 3300005344 Bacteria 5439
11 Ga0070692_10025785 3300005345 Bacteria 2901
12 Ga0070675_100003832 3300005354 Bacteria 11409
13 Ga0070659_100001502 3300005366 Bacteria 16813
14 Ga0070667_100133514 3300005367 Bacteria 2168
15 Ga0070663_100011664 3300005455 Bacteria 5525
16 Ga0068867_100184861 3300005459 Bacteria 1659
17 Ga0070684_100009947 3300005535 Bacteria 7519
18 Ga0070665_100014828 3300005548 Bacteria 7823
19 Ga0070665_100073495 3300005548 Bacteria 3425
20 Ga0070664_100001017 3300005564 Bacteria 22018
21 Ga0068857_100007493 3300005577 Bacteria 9396
22 Ga0068857_100173947 3300005577 Bacteria 1958
23 Ga0070702_100010552 3300005615 Bacteria 4556
24 Ga0068852_100048235 3300005616 Bacteria 3638
25 Ga0068859_100224875 3300005617 Bacteria 1965
26 Ga0068863_100018234 3300005841 Bacteria 6720
27 Ga0068858_100017454 3300005842 Bacteria 6732
28 Ga0068860_100057062 3300005843 Bacteria 3711
29 Ga0068862_100003795 3300005844 Bacteria 12873
30 Ga0068862_100053895 3300005844 Bacteria 3444
31 Ga0081540_1008397 3300005983 Bacteria 7218
32 Ga0081539_10000253 3300005985 Bacteria 124747
33 Ga0081539_10001422 3300005985 Bacteria 41133
34 Ga0081539_10006329 3300005985 Bacteria 11427
35 Ga0075428_100000249 3300006844 Bacteria 52754
36 Ga0075428_100023607 3300006844 Bacteria 6808
37 Ga0075430_100000302 3300006846 Bacteria 34911
38 Ga0075430_100001565 3300006846 Bacteria 18738
39 Ga0075431_100135768 3300006847 Bacteria 2536
40 Ga0075429_100008479 3300006880 Bacteria 8947
41 Ga0068865_100254572 3300006881 Bacteria 1387
42 Ga0097620_100224875 3300006931 Bacteria 1965
43 Ga0111539_10002939 3300009094 Bacteria 22595
44 Ga0105245_10006225 3300009098 Bacteria 10498
45 Ga0114129_10000391 3300009147 Bacteria 51146
46 Ga0114129_10006293 3300009147 Bacteria 16827
47 Ga0105248_10421019 3300009177 Bacteria 1504
48 Ga0105239_10190560 3300010375 Bacteria 2295
49 Ga0157375_10338047 3300013308 Bacteria 1671
50 Ga0157377_10007126 3300014745 Bacteria 5379
51 Ga0206353_10378939 3300020082 Bacteria 8409
52 Ga0207659_10001668 3300025926 Bacteria 13192
53 Ga0207687_10019349 3300025927 Bacteria 4511
54 Ga0207664_10237388 3300025929 Bacteria 1586
55 Ga0207690_10012294 3300025932 Bacteria 5123
56 Ga0207706_10084804 3300025933 Bacteria 2785
57 Ga0207669_10128749 3300025937 Bacteria 1735
58 Ga0207704_10075942 3300025938 Bacteria 2151
59 Ga0207711_10270555 3300025941 Bacteria 1563
60 Ga0207689_10018326 3300025942 Bacteria 5909
61 Ga0207661_10002564 3300025944 Bacteria 12507
62 Ga0207661_10340860 3300025944 Bacteria 1350
63 Ga0207679_10008306 3300025945 Bacteria 6612
64 Ga0207679_10087198 3300025945 Bacteria 2403
65 Ga0207668_10007997 3300025972 Bacteria 6293
66 Ga0207658_10070691 3300025986 Bacteria 2641
67 Ga0207703_10032882 3300026035 Bacteria 4108
68 Ga0207678_10010910 3300026067 Bacteria 7982
69 Ga0207708_10004617 3300026075 Bacteria 10140
70 Ga0207641_10258608 3300026088 Bacteria 1629
71 Ga0207676_10091018 3300026095 Bacteria 2505
72 Ga0207674_10034686 3300026116 Bacteria 5272
73 Ga0207675_100090359 3300026118 Bacteria 2879
74 Ga0207698_10007463 3300026142 Bacteria 6848
75 Ga0268266_10036480 3300028379 Bacteria 4185
76 Ga0268265_10003188 3300028380 Bacteria 11917
77 Ga0268264_10142575 3300028381 Bacteria 2138
78 Ga0307515_10012385 3300028794 Bacteria 16050
79 Ga0307515_10045519 3300028794 Bacteria 6738
80 Ga0307515_10074476 3300028794 Bacteria 4541
81 Ga0307512_10042124 3300030522 Bacteria 3785
82 Ga0307513_10003582 3300031456 Bacteria 20990
83 Ga0307513_10011654 3300031456 Bacteria 10911
84 Ga0307513_10078149 3300031456 Bacteria 3424
85 Ga0307508_10003465 3300031616 Bacteria 15950
86 Ga0307516_10000787 3300031730 Bacteria 43326
87 Ga0307516_10036221 3300031730 Bacteria 4940
88 Ga0307516_10081662 3300031730 Bacteria 3075
89 Ga0307413_10084230 3300031824 Bacteria 2049
90 Ga0326468_10000180 3300031889 Bacteria 6340
91 Ga0307406_10023437 3300031901 Bacteria 3673
92 Ga0307409_100019193 3300031995 Bacteria 4622
93 Ga0307416_100181568 3300032002 Bacteria 1973
94 Ga0307416_100245844 3300032002 Bacteria 1737
95 Ga0307411_10130213 3300032005 Bacteria 1838
96 Ga0307411_10134778 3300032005 Bacteria 1811
97 Ga0307415_100007695 3300032126 Bacteria 5916
98 Ga0307507_10086063 3300033179 Bacteria 2729
99 Ga0373951_0000432 3300035091 Bacteria 12308
100 Ga0373956_0000907 3300035119 Bacteria 12266
101 Ga0373942_0017943 3300035207 Bacteria 1751
102 Ga0373962_0026162 3300035242 Bacteria 1571
103 Ga0373935_0063606 3300035692 Bacteria 2365
104 Ga0395899_0045449 3300037312 Bacteria 3272
105 Ga0395900_0053313 3300037418 Bacteria 4162
106 Ga0395900_0071683 3300037418 Bacteria 3562
107 Ga0395898_0079196 3300037466 Bacteria 3170
108 Ga0395898_0117499 3300037466 Bacteria 2548
109 Ga0395901_0427347 3300038443 Bacteria 1357
110 Ga0466967_0055308 3300045976 Bacteria 3496
111 Ga0495594_0034537 3300046499 Bacteria 2751
112 Ga0495594_0106526 3300046499 Bacteria 1579
113 Ga0495606_0002087 3300046507 Bacteria 24366
114 Ga0495622_0093290 3300046557 Bacteria 1382
115 Ga0495668_0000529 3300046616 Bacteria 47516
116 Ga0495625_0001335 3300046660 Bacteria 30644
117 Ga0495626_0000433 3300048091 Bacteria 42766
118 Ga0496108_0000085 3300048911 Bacteria 101144
119 Ga0496112_0030310 3300048915 Bacteria 5233
120 Ga0496112_0228993 3300048915 Bacteria 1813
121 Ga0496113_0052853 3300048916 Bacteria 3036
122 Ga0501032_0084045 3300049569 Bacteria 2116
123 Ga0501034_0161186 3300049571 Bacteria 2214
124 Ga0501034_0263930 3300049571 Bacteria 1664
125 Ga0501036_0084520 3300049572 Bacteria 2683
126 Ga0501037_0238398 3300049573 Bacteria 1275
127 Ga0501038_0031755 3300049574 Bacteria 4665
128 Ga0501039_0110483 3300049575 Bacteria 2149
129 Ga0501043_0100761 3300049579 Bacteria 2271
130 Ga0501046_0088777 3300049580 Bacteria 2380
131 Ga0501047_0044317 3300049581 Bacteria 4298
132 Ga0501069_0056304 3300049585 Bacteria 2190
133 Ga0501074_0197852 3300049590 Bacteria 1432
134 Ga0501044_0020143 3300049823 Bacteria 7119
135 Ga0501044_0257360 3300049823 Bacteria 1684
136 Ga0501045_0065182 3300049824 Bacteria 2675
137 nmdc:mga05p37_20413_c1 3300050507 Bacteria 8014
138 nmdc:mga05p37_31482_c1 3300050507 Bacteria 6479
139 nmdc:mga09592_7214_c1 3300050508 Bacteria 9038
140 nmdc:mga0qj67_155415_c1 3300050509 Bacteria 1856
141 nmdc:mga0qj67_256_c1 3300050509 Bacteria 36383
142 nmdc:mga06r32_100508_c1 3300050510 Bacteria 2442
143 nmdc:mga08y16_13392_c1 3300050511 Bacteria 8627
144 Ga0500644_0007947 3300053088 Bacteria 2781
145 Ga0500644_0013338 3300053088 Bacteria 2294
146 Ga0500594_0010421 3300053118 Bacteria 2158
147 Ga0500652_031708 3300053131 Bacteria 2076
148 Ga0500600_0048738 3300053149 Bacteria 2411
149 Ga0501084_0350618 3300054114 Bacteria 1247
150 2501943642 2501939600 Bacteria 6907073
151 2515494538 2515154088 Bacteria 5526283
152 2515722064 2515154129 Bacteria 5584369
153 2515758122 2515154137 Bacteria 5711575
154 2516085908 2515154202 Bacteria 5471270
155 2516090495 2515154203 Bacteria 5458536
156 2623587454 2622736626 Bacteria 7181580
157 2676481962 2675903059 Bacteria 8644972
158 2753262598 2751185782 Bacteria 11227053
159 2772643857 2772190715 Bacteria 6959372
160 2831938569 2831935698 Bacteria 5963223
161 2832008718 2832004796 Bacteria 6538017
162 2855672841 2855670206 Bacteria 7120389
163 2855677301 2855676851 Bacteria 7063653
164 2855688151 2855683550 Bacteria 7134265
165 2856861323 2856858025 Bacteria 7255264
166 2857294828 2857288857 Bacteria 7189066
167 2858855478 2858848962 Bacteria 6963058
168 2858871845 2858868258 Bacteria 7683772
169 2858885434 2858882152 Bacteria 7230291
170 2858892247 2858888857 Bacteria 7060307
171 2858902081 2858895516 Bacteria 7378898
172 2858904018 2858902515 Bacteria 7086037
173 2866069776 2866065130 Bacteria 6518152
174 2867305807 2867302475 Bacteria 7087181
175 2867315409 2867312974 Bacteria 7058875
176 2867325537 2867319477 Bacteria 7069771
177 2867510336 2867507094 Bacteria 6506033
178 2869055202 2869048445 Bacteria 6875584
179 2869062904 2869061728 Bacteria 7112407
180 2869072500 2869068681 Bacteria 7205615
181 2880492774 2880489317 Bacteria 7096270
182 2880499542 2880495981 Bacteria 7340502
183 2887481739 2887478801 Bacteria 8972725
184 2902587753 2902582711 Bacteria 6187705
185 2929221505 2929219909 Bacteria 6984360
186 2929228133 2929226422 Bacteria 7248583
187 2996226842 2996221748 Bacteria 6799777
188 649812077 649633069 Bacteria 6962533
189 8001788999 8001781756 Bacteria 9586736
190 8003830833 8003830390 Bacteria 6541657
191 8003856890 8003856774 Bacteria 7675274
192 8003875358 8003870546 Bacteria 7396674
193 8054705997 8054704163 Bacteria 7247792
194 8054732179 8054727385 Bacteria 7558670
195 8054740946 8054734606 Bacteria 6947278
196 8055416827 8055412473 Bacteria 6257500
197 Ga0307405_10033180
198 rootH1_10010972
199 rootH2_10009466
200 Ga0070658_10002448
201 Ga0070683_100089017
202 Ga0070683_100230578
203 Ga0070680_100025888
204 Ga0070661_100012066
205 Ga0070661_100015162
206 Ga0070692_10025785
207 Ga0070675_100003832
208 Ga0070659_100001502
209 Ga0070667_100133514
210 Ga0070663_100011664
211 Ga0068867_100184861
212 Ga0070684_100009947
213 Ga0070665_100014828
214 Ga0070665_100073495
215 Ga0070664_100001017
216 Ga0068857_100007493
217 Ga0068857_100173947
218 Ga0070702_100010552
219 Ga0068852_100048235
220 Ga0068859_100224875
221 Ga0068863_100018234
222 Ga0068858_100017454
223 Ga0068860_100057062
224 Ga0068862_100003795
225 Ga0068862_100053895
226 Ga0081540_1008397
227 Ga0081539_10000253
228 Ga0081539_10001422
229 Ga0081539_10006329
230 Ga0075428_100000249
231 Ga0075428_100023607
232 Ga0075430_100000302
233 Ga0075430_100001565
234 Ga0075431_100135768
235 Ga0075429_100008479
236 Ga0068865_100254572
237 Ga0097620_100224875
238 Ga0111539_10002939
239 Ga0105245_10006225
240 Ga0114129_10000391
241 Ga0114129_10006293
242 Ga0105248_10421019
243 Ga0105239_10190560
244 Ga0157375_10338047
245 Ga0157377_10007126
246 Ga0206353_10378939
247 Ga0207659_10001668
248 Ga0207687_10019349
249 Ga0207664_10237388
250 Ga0207690_10012294
251 Ga0207706_10084804
252 Ga0207669_10128749
253 Ga0207704_10075942
254 Ga0207711_10270555
255 Ga0207689_10018326
256 Ga0207661_10002564
257 Ga0207661_10340860
258 Ga0207679_10008306
259 Ga0207679_10087198
260 Ga0207668_10007997
261 Ga0207658_10070691
262 Ga0207703_10032882
263 Ga0207678_10010910
264 Ga0207708_10004617
265 Ga0207641_10258608
266 Ga0207676_10091018
267 Ga0207674_10034686
268 Ga0207675_100090359
269 Ga0207698_10007463
270 Ga0268266_10036480
271 Ga0268265_10003188
272 Ga0268264_10142575
273 Ga0307515_10012385
274 Ga0307515_10045519
275 Ga0307515_10074476
276 Ga0307512_10042124
277 Ga0307513_10003582
278 Ga0307513_10011654
279 Ga0307513_10078149
280 Ga0307508_10003465
281 Ga0307516_10000787
282 Ga0307516_10036221
283 Ga0307516_10081662
284 Ga0307413_10084230
285 Ga0326468_10000180
286 Ga0307406_10023437
287 Ga0307409_100019193
288 Ga0307416_100181568
289 Ga0307416_100245844
290 Ga0307411_10130213
291 Ga0307411_10134778
292 Ga0307415_100007695
293 Ga0307507_10086063
294 Ga0373951_0000432
295 Ga0373956_0000907
296 Ga0373942_0017943
297 Ga0373962_0026162
298 Ga0373935_0063606
299 Ga0395899_0045449
300 Ga0395900_0053313
301 Ga0395900_0071683
302 Ga0395898_0079196
303 Ga0395898_0117499
304 Ga0395901_0427347
305 Ga0466967_0055308
306 Ga0495594_0034537
307 Ga0495594_0106526
308 Ga0495606_0002087
309 Ga0495622_0093290
310 Ga0495668_0000529
311 Ga0495625_0001335
312 Ga0495626_0000433
313 Ga0496108_0000085
314 Ga0496112_0030310
315 Ga0496112_0228993
316 Ga0496113_0052853
317 Ga0501032_0084045
318 Ga0501034_0161186
319 Ga0501034_0263930
320 Ga0501036_0084520
321 Ga0501037_0238398
322 Ga0501038_0031755
323 Ga0501039_0110483
324 Ga0501043_0100761
325 Ga0501046_0088777
326 Ga0501047_0044317
327 Ga0501069_0056304
328 Ga0501074_0197852
329 Ga0501044_0020143
330 Ga0501044_0257360
331 Ga0501045_0065182
332 nmdc:mga05p37_20413_c1
333 nmdc:mga05p37_31482_c1
334 nmdc:mga09592_7214_c1
335 nmdc:mga0qj67_155415_c1
336 nmdc:mga0qj67_256_c1
337 nmdc:mga06r32_100508_c1
338 nmdc:mga08y16_13392_c1
339 Ga0500644_0007947
340 Ga0500644_0013338
341 Ga0500594_0010421
342 Ga0500652_031708
343 Ga0500600_0048738
344 Ga0501084_0350618
345 2501943642
346 2515494538
347 2515722064
348 2515758122
349 2516085908
350 2516090495
351 2623587454
352 2676481962
353 2753262598
354 2772643857
355 2831938569
356 2832008718
357 2855672841
358 2855677301
359 2855688151
360 2856861323
361 2857294828
362 2858855478
363 2858871845
364 2858885434
365 2858892247
366 2858902081
367 2858904018
368 2866069776
369 2867305807
370 2867315409
371 2867325537
372 2867510336
373 2869055202
374 2869062904
375 2869072500
376 2880492774
377 2880499542
378 2887481739
379 2902587753
380 2929221505
381 2929228133
382 2996226842
383 649812077
384 8001788999
385 8003830833
386 8003856890
387 8003875358
388 8054705997
389 8054732179
390 8054740946
391 8055416827

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF12320

SbcD_C

Type 5 capsule protein repressor C-terminal domain

278

362

0.85

PF12850

Metallophos_2

Calcineurin-like phosphoesterase superfamily domain

1

171

0.8

PF00149

Metallophos

Calcineurin-like phosphoesterase

1

228

0.48

Structural Annotation

Top 5 Hits

ID Description Score Start End
4lu9-assembly1.cif.gz_C crystal structure of e.coli sbcd at 2.5 angstrom resolution 0.8196 1 328
4lty-assembly1.cif.gz_C crystal structure of e.coli sbcd at 1.8 a resolution 0.8048 1 330
3thn-assembly1.cif.gz_A-2 crystal structure of mre11 core with manganese 0.8039 1 328
4lu9-assembly1.cif.gz_C crystal structure of e.coli sbcd at 2.5 angstrom resolution 0.7995 1 328
3thn-assembly1.cif.gz_A-2 crystal structure of mre11 core with manganese 0.7992 1 328
ID Description Score Start End Superfamily
af_Q2FYT4_1_259_3.60.21.10 Alpha Beta;4-Layer Sandwich;Purple Acid Phosphatase; chain A, domain 2;Metallo-dependent phosphatases 0.8395 1 275 3.60.21.10
af_Q2FYT4_1_259_3.60.21.10 Alpha Beta;4-Layer Sandwich;Purple Acid Phosphatase; chain A, domain 2;Metallo-dependent phosphatases 0.8365 1 275 3.60.21.10
4m0vA01 Alpha Beta;4-Layer Sandwich;Purple Acid Phosphatase; chain A, domain 2;Metallo-dependent phosphatases 0.8346 1 275 3.60.21.10
2q8uA01 Alpha Beta;4-Layer Sandwich;Purple Acid Phosphatase; chain A, domain 2;Metallo-dependent phosphatases 0.8227 1 276 3.60.21.10
4m0vA01 Alpha Beta;4-Layer Sandwich;Purple Acid Phosphatase; chain A, domain 2;Metallo-dependent phosphatases 0.8149 1 275 3.60.21.10
ID Description Score Start End GO Terms
AF-A0A7K3SHQ0-F1-model_v4 Nuclease SbcCD subunit D 0.967 1 91 GO:0004519
GO:0006260
GO:0006310
GO:0008408
AF-A0A382LXD2-F1-model_v4 Calcineurin-like phosphoesterase domain-containing protein 0.9659 1 95 GO:0004519
GO:0006259
GO:0008408
AF-A0A2V7Y5Z2-F1-model_v4 Nuclease SbcCD subunit D 0.9657 1 106 GO:0004519
GO:0006260
GO:0006310
GO:0008408
AF-A0A2S5LNV1-F1-model_v4 Nuclease SbcCD subunit D 0.9606 1 102 GO:0004519
GO:0006260
GO:0006310
GO:0008408
AF-A0A2W4IQH2-F1-model_v4 Nuclease SbcCD subunit D 0.9577 1 312 GO:0004519
GO:0006260
GO:0006310
GO:0008408

Map