F296437

General Info

Members Datasets Scaffolds Average Seq Length
192 155 384 244

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2964326757|2964329628
Length 287
Sequence GGSDAPGSPGAPDAPVAAVVSEAPDARTVPAIPSPGAPSAAAGETLALADEALFRPVRAGNAFEETVARLLQTIRLGIVAPGDALPAERDLAVRFAVSRDTVRDALKSLADAGFVVSRRGRYGGTFVQSTLPPRGVANAVEDPTGVGEVTAAEIEDILILRDALETGAARAAAGRSLPASERDALWRRLRDAESAPAGDYRRLDSRLHLTIAESAGAPSLVPLLAENRMRVNALLDAIPLLEPNIVHSNEQHERVVLAILTGNVDAAADAMREHLEGSAALLRGFLA

Samples

Sample ID Description Type Environment
1 3300002239 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S2 Metagenome Rhizosphere
2 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
5 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
6 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
7 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
8 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
9 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
10 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
11 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
12 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
13 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
14 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
15 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
16 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
17 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
18 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
19 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
20 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
21 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
22 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
23 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
24 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
25 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
26 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
27 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
28 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
29 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
30 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
31 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
32 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
33 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
34 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
35 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
36 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
37 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
38 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
39 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
40 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
41 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
42 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
43 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
44 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
45 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
46 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
47 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
78 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
79 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
80 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
81 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
82 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
83 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
84 3300031838 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM Metagenome Unclassified
85 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
86 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
87 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
88 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
89 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
90 3300035121 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_3 Metagenome Rhizosphere
91 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
92 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
93 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
94 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
95 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
96 3300041462 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_8 MetaG Metagenome Rhizoplane
97 3300042004 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 Metagenome Rhizosphere
98 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
99 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
100 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
101 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
102 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
103 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
104 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
105 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
106 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
107 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
108 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
109 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
110 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
111 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
112 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
113 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
114 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
115 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
116 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
117 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
118 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
119 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
120 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
121 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
122 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
123 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
124 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
125 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
126 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
127 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
128 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
129 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
130 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
131 3300053083 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 rhizosphere Metagenome Rhizosphere
132 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
133 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
134 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
135 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
136 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
137 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
138 2964326757 Planctomonas psychrotolerans J5903 Isolate Rhizosphere
139 2523231044 Gordonia rhizosphera NBRC 16068 Isolate Rhizosphere
140 2643221549 Agromyces sp. Root1464 Isolate Unclassified
141 2643221572 Leifsonia sp. Root60 Isolate Unclassified
142 2643221619 Agromyces sp. Root81 Isolate Unclassified
143 2643221641 Nocardioides sp. Root122 Isolate Unclassified
144 2643221669 Leifsonia sp. Root1293 Isolate Unclassified
145 2795385472 Herbihabitans rhizosphaerae DSM 101727 Isolate Rhizosphere
146 2808606372 Agromyces sp. 23-23 Isolate Unclassified
147 2852643534 Leifsonia sp. AK011 Isolate Rhizosphere
148 2857733635 Salinibacterium sp. R-73062 Isolate Unclassified
149 2862993130 Planctomonas deserti 13S1-3 v2 Isolate Rhizosphere
150 2870622029 Conyzicola lurida DSM 105784 Isolate Unclassified
151 2895660088 Leifsonia flava SYP-B2174 Isolate Rhizosphere
152 2939657138 Conyzicola nivalis 2857 Isolate Rhizosphere
153 2995726249 Leucobacter zeae CC-MF41 Isolate Rhizosphere
154 8055034563 Leucobacter allii H21R-40 Isolate Rhizosphere
155 8055037949 Leucobacter rhizosphaerae H25R-14 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 90.62
Metatranscriptomes 0
Isolates 9.38

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 11.98
Nodule 0
Rhizoplane 7.29
Rhizosphere 67.71
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24034J26672_10009369 3300002239 Bacteria 1443
2 rootH1_10143266 3300003316 Bacteria 1132
3 rootH1_10164285 3300003316 Bacteria 2001
4 Ga0070683_100284850 3300005329 Bacteria 1572
5 Ga0068868_100015541 3300005338 Bacteria 5633
6 Ga0068868_100364037 3300005338 Bacteria 1241
7 Ga0070660_100041202 3300005339 Bacteria 3519
8 Ga0070668_100255373 3300005347 Bacteria 1456
9 Ga0070671_100740865 3300005355 Bacteria 854
10 Ga0070659_100002016 3300005366 Bacteria 14517
11 Ga0070667_100014360 3300005367 Bacteria 6544
12 Ga0070709_10237407 3300005434 Bacteria 1307
13 Ga0070714_100958317 3300005435 Bacteria 832
14 Ga0070711_100010404 3300005439 Bacteria 5756
15 Ga0070700_100094966 3300005441 Bacteria 1953
16 Ga0070663_100128941 3300005455 Bacteria 1918
17 Ga0070678_100139551 3300005456 Bacteria 1938
18 Ga0070685_10024061 3300005466 Bacteria 3342
19 Ga0070693_100071956 3300005547 Bacteria 2038
20 Ga0068854_100064131 3300005578 Bacteria 2669
21 Ga0068856_100052222 3300005614 Bacteria 4030
22 Ga0068852_100107604 3300005616 Bacteria 2529
23 Ga0068859_100068244 3300005617 Bacteria 3591
24 Ga0068858_100000048 3300005842 Bacteria 126360
25 Ga0075364_10001071 3300006051 Bacteria 14564
26 Ga0075364_10134681 3300006051 Bacteria 1659
27 Ga0070712_100028488 3300006175 Bacteria 3736
28 Ga0075362_10009543 3300006177 Bacteria 3756
29 Ga0075428_100008016 3300006844 Bacteria 11719
30 Ga0075430_100011083 3300006846 Bacteria 7640
31 Ga0075430_100160585 3300006846 Bacteria 1871
32 Ga0075431_100242358 3300006847 Bacteria 1833
33 Ga0075429_100024876 3300006880 Bacteria 5196
34 Ga0097620_100068244 3300006931 Bacteria 3591
35 Ga0111539_10196719 3300009094 Bacteria 2351
36 Ga0105245_10007554 3300009098 Bacteria 9526
37 Ga0105247_10211571 3300009101 Bacteria 1308
38 Ga0114129_10037132 3300009147 Bacteria 6878
39 Ga0105243_10946422 3300009148 Bacteria 860
40 Ga0105241_10666695 3300009174 Bacteria 946
41 Ga0105242_10230876 3300009176 Bacteria 1658
42 Ga0105238_10132846 3300009551 Bacteria 2467
43 Ga0105246_10089066 3300011119 Bacteria 2219
44 Ga0105246_10110846 3300011119 Bacteria 2016
45 Ga0157374_10618544 3300013296 Bacteria 1094
46 Ga0157372_10223872 3300013307 Bacteria 2181
47 Ga0163163_10914956 3300014325 Bacteria 940
48 Ga0157380_10034369 3300014326 Bacteria 3910
49 Ga0157379_10132369 3300014968 Bacteria 2245
50 Ga0163161_10027221 3300017792 Bacteria 4055
51 Ga0213875_10000376 3300021388 Bacteria 40820
52 Ga0207688_10036538 3300025901 Bacteria 2723
53 Ga0207647_10017209 3300025904 Bacteria 4918
54 Ga0207685_10005631 3300025905 Bacteria 3330
55 Ga0207699_10158503 3300025906 Bacteria 1504
56 Ga0207643_10172071 3300025908 Bacteria 1307
57 Ga0207705_10222357 3300025909 Bacteria 1434
58 Ga0207695_10028678 3300025913 Bacteria 6163
59 Ga0207671_10283522 3300025914 Bacteria 1307
60 Ga0207693_10002468 3300025915 Bacteria 16073
61 Ga0207663_10051042 3300025916 Bacteria 2574
62 Ga0207694_10261670 3300025924 Bacteria 1417
63 Ga0207687_10099598 3300025927 Bacteria 2136
64 Ga0207690_10000625 3300025932 Bacteria 22896
65 Ga0207686_10080841 3300025934 Bacteria 2120
66 Ga0207709_10019164 3300025935 Bacteria 3842
67 Ga0207665_10001513 3300025939 Bacteria 15649
68 Ga0207667_10078599 3300025949 Bacteria 3419
69 Ga0207712_10199573 3300025961 Bacteria 1585
70 Ga0207668_10207407 3300025972 Bacteria 1565
71 Ga0207640_10098466 3300025981 Bacteria 2045
72 Ga0207658_10018919 3300025986 Bacteria 4763
73 Ga0207658_10477370 3300025986 Bacteria 1107
74 Ga0207703_10000064 3300026035 Bacteria 126619
75 Ga0207639_10013638 3300026041 Bacteria 5697
76 Ga0207678_10064253 3300026067 Bacteria 3154
77 Ga0207678_10413646 3300026067 Bacteria 1169
78 Ga0207708_10008108 3300026075 Bacteria 7783
79 Ga0207702_10256523 3300026078 Bacteria 1644
80 Ga0207648_10234278 3300026089 Bacteria 1634
81 Ga0207674_10081669 3300026116 Bacteria 3234
82 Ga0207674_10441138 3300026116 Bacteria 1258
83 Ga0207675_100214142 3300026118 Bacteria 1854
84 Ga0268265_10437673 3300028380 Bacteria 1218
85 Ga0307513_10468147 3300031456 Bacteria 982
86 Ga0307514_10031745 3300031649 Bacteria 4233
87 Ga0316575_10014306 3300031665 Bacteria 2977
88 Ga0316579_10017515 3300031691 Bacteria 3142
89 Ga0316576_10084676 3300031727 Bacteria 2356
90 Ga0316578_10018471 3300031728 Bacteria 3821
91 Ga0316578_10059749 3300031728 Bacteria 2243
92 Ga0307413_10472915 3300031824 Bacteria 1000
93 Ga0307413_10747975 3300031824 Bacteria 817
94 Ga0307518_10246405 3300031838 Bacteria 1140
95 Ga0307406_10240014 3300031901 Bacteria 1359
96 Ga0307414_10128334 3300032004 Bacteria 1964
97 Ga0307414_10230471 3300032004 Bacteria 1527
98 Ga0307415_100131813 3300032126 Bacteria 1894
99 Ga0307415_100828113 3300032126 Bacteria 847
100 Ga0316580_10082217 3300032139 Bacteria 985
101 Ga0373939_0026793 3300035114 Bacteria 1628
102 Ga0373960_0050024 3300035121 Bacteria 1237
103 Ga0316574_0024787 3300035398 Bacteria 3593
104 Ga0316582_0000984 3300036647 Bacteria 11857
105 Ga0316584_0037838 3300036712 Bacteria 3587
106 Ga0316584_0166385 3300036712 Bacteria 1637
107 Ga0436364_0909585 3300037853 Bacteria 12184
108 Ga0439466_0023908 3300041411 Bacteria 2146
109 Ga0451806_779347 3300041462 Bacteria 1536
110 Ga0439445_0035915 3300042004 Bacteria 1302
111 Ga0466971_0211654 3300044719 Bacteria 917
112 Ga0466970_0008013 3300044765 Bacteria 5303
113 Ga0466970_0018672 3300044765 Bacteria 3592
114 Ga0466967_0001116 3300045976 Bacteria 14902
115 Ga0466967_0013013 3300045976 Bacteria 6402
116 Ga0466967_0156888 3300045976 Bacteria 2132
117 Ga0495590_0001922 3300046457 Bacteria 8800
118 Ga0495638_0112095 3300046460 Bacteria 1619
119 Ga0495625_0030411 3300046660 Bacteria 4030
120 Ga0495672_0109414 3300047320 Bacteria 1485
121 Ga0495672_0197801 3300047320 Bacteria 1007
122 Ga0495672_0236409 3300047320 Bacteria 894
123 Ga0496100_0034146 3300048903 Bacteria 3189
124 Ga0496102_0132411 3300048905 Bacteria 2335
125 Ga0496102_0163866 3300048905 Bacteria 2091
126 Ga0496102_0285519 3300048905 Bacteria 1555
127 Ga0496103_0114279 3300048906 Bacteria 1716
128 Ga0496106_0040062 3300048909 Bacteria 3507
129 Ga0496107_0024644 3300048910 Bacteria 4257
130 Ga0496109_0057484 3300048912 Bacteria 3551
131 Ga0496111_0496265 3300048914 Bacteria 899
132 Ga0496112_0032067 3300048915 Bacteria 5100
133 Ga0496113_0064321 3300048916 Bacteria 2773
134 Ga0496113_0089245 3300048916 Bacteria 2372
135 Ga0496115_0797298 3300048918 Bacteria 735
136 Ga0496118_0081596 3300048921 Bacteria 2270
137 Ga0496119_0003938 3300048922 Bacteria 15056
138 Ga0496120_0001093 3300048923 Bacteria 35422
139 Ga0496121_0037310 3300048924 Bacteria 4318
140 Ga0496122_0000900 3300048925 Bacteria 54975
141 Ga0496122_0020280 3300048925 Bacteria 6016
142 Ga0496123_0003148 3300048926 Bacteria 18907
143 Ga0496123_0008296 3300048926 Bacteria 9566
144 Ga0496125_0357213 3300048928 Bacteria 870
145 Ga0496126_0025682 3300048929 Bacteria 5661
146 Ga0501044_0153815 3300049823 Bacteria 2281
147 nmdc:mga03683_9395_c1 3300050489 Bacteria 3474
148 nmdc:mga03n38_38203_c1 3300050490 Bacteria 2075
149 nmdc:mga00v17_122318_c1 3300050491 Bacteria 1658
150 nmdc:mga00v17_2974_c1 3300050491 Bacteria 7041
151 nmdc:mga00v17_615_c1 3300050491 Bacteria 19722
152 nmdc:mga05p37_292611_c1 3300050507 Bacteria 1938
153 nmdc:mga09592_168442_c1 3300050508 Bacteria 1894
154 nmdc:mga0qj67_175902_c1 3300050509 Bacteria 1738
155 nmdc:mga0qj67_54651_c1 3300050509 Bacteria 3162
156 nmdc:mga06r32_12654_c1 3300050510 Bacteria 7625
157 nmdc:mga06r32_360917_c1 3300050510 Bacteria 1437
158 Ga0495655_0029687 3300053083 Bacteria 1316
159 Ga0500559_0001751 3300053136 Bacteria 11907
160 Ga0500559_0007877 3300053136 Bacteria 4702
161 Ga0500559_0032288 3300053136 Bacteria 2250
162 Ga0500559_0139983 3300053136 Bacteria 1133
163 Ga0500568_0011033 3300053139 Bacteria 4208
164 Ga0500573_0000001 3300053140 Bacteria 436394
165 Ga0500573_0005131 3300053140 Bacteria 6985
166 Ga0500573_0051010 3300053140 Bacteria 2380
167 Ga0500573_0052939 3300053140 Bacteria 2333
168 Ga0500573_0066136 3300053140 Bacteria 2067
169 Ga0500573_0068857 3300053140 Bacteria 2020
170 Ga0500573_0090575 3300053140 Bacteria 1728
171 Ga0500573_0190450 3300053140 Bacteria 1096
172 Ga0500616_0000027 3300053153 Bacteria 441053
173 Ga0500645_009133 3300053730 Bacteria 3345
174 Ga0466962_0094965 3300061719 Bacteria 1429
175 2964329628 2964326757 Bacteria 3290868
176 2523382281 2523231044 Bacteria 6434991
177 2643769429 2643221549 Bacteria 4042819
178 2643874823 2643221572 Bacteria 3614809
179 2644114043 2643221619 Bacteria 4158469
180 2644231406 2643221641 Bacteria 4490190
181 2644381879 2643221669 Bacteria 3611286
182 2795796087 2795385472 Bacteria 6627535
183 2808902689 2808606372 Bacteria 4649509
184 2852646219 2852643534 Bacteria 3013378
185 2857736465 2857733635 Bacteria 3532004
186 2862993398 2862993130 Bacteria 3860849
187 2870624508 2870622029 Bacteria 3643329
188 2895660911 2895660088 Bacteria 3782833
189 2939660082 2939657138 Bacteria 3740283
190 2995727315 2995726249 Bacteria 3470435
191 8055036720 8055034563 Bacteria 3562128
192 8055040857 8055037949 Bacteria 3337834
193 JGI24034J26672_10009369
194 rootH1_10143266
195 rootH1_10164285
196 Ga0070683_100284850
197 Ga0068868_100015541
198 Ga0068868_100364037
199 Ga0070660_100041202
200 Ga0070668_100255373
201 Ga0070671_100740865
202 Ga0070659_100002016
203 Ga0070667_100014360
204 Ga0070709_10237407
205 Ga0070714_100958317
206 Ga0070711_100010404
207 Ga0070700_100094966
208 Ga0070663_100128941
209 Ga0070678_100139551
210 Ga0070685_10024061
211 Ga0070693_100071956
212 Ga0068854_100064131
213 Ga0068856_100052222
214 Ga0068852_100107604
215 Ga0068859_100068244
216 Ga0068858_100000048
217 Ga0075364_10001071
218 Ga0075364_10134681
219 Ga0070712_100028488
220 Ga0075362_10009543
221 Ga0075428_100008016
222 Ga0075430_100011083
223 Ga0075430_100160585
224 Ga0075431_100242358
225 Ga0075429_100024876
226 Ga0097620_100068244
227 Ga0111539_10196719
228 Ga0105245_10007554
229 Ga0105247_10211571
230 Ga0114129_10037132
231 Ga0105243_10946422
232 Ga0105241_10666695
233 Ga0105242_10230876
234 Ga0105238_10132846
235 Ga0105246_10089066
236 Ga0105246_10110846
237 Ga0157374_10618544
238 Ga0157372_10223872
239 Ga0163163_10914956
240 Ga0157380_10034369
241 Ga0157379_10132369
242 Ga0163161_10027221
243 Ga0213875_10000376
244 Ga0207688_10036538
245 Ga0207647_10017209
246 Ga0207685_10005631
247 Ga0207699_10158503
248 Ga0207643_10172071
249 Ga0207705_10222357
250 Ga0207695_10028678
251 Ga0207671_10283522
252 Ga0207693_10002468
253 Ga0207663_10051042
254 Ga0207694_10261670
255 Ga0207687_10099598
256 Ga0207690_10000625
257 Ga0207686_10080841
258 Ga0207709_10019164
259 Ga0207665_10001513
260 Ga0207667_10078599
261 Ga0207712_10199573
262 Ga0207668_10207407
263 Ga0207640_10098466
264 Ga0207658_10018919
265 Ga0207658_10477370
266 Ga0207703_10000064
267 Ga0207639_10013638
268 Ga0207678_10064253
269 Ga0207678_10413646
270 Ga0207708_10008108
271 Ga0207702_10256523
272 Ga0207648_10234278
273 Ga0207674_10081669
274 Ga0207674_10441138
275 Ga0207675_100214142
276 Ga0268265_10437673
277 Ga0307513_10468147
278 Ga0307514_10031745
279 Ga0316575_10014306
280 Ga0316579_10017515
281 Ga0316576_10084676
282 Ga0316578_10018471
283 Ga0316578_10059749
284 Ga0307413_10472915
285 Ga0307413_10747975
286 Ga0307518_10246405
287 Ga0307406_10240014
288 Ga0307414_10128334
289 Ga0307414_10230471
290 Ga0307415_100131813
291 Ga0307415_100828113
292 Ga0316580_10082217
293 Ga0373939_0026793
294 Ga0373960_0050024
295 Ga0316574_0024787
296 Ga0316582_0000984
297 Ga0316584_0037838
298 Ga0316584_0166385
299 Ga0436364_0909585
300 Ga0439466_0023908
301 Ga0451806_779347
302 Ga0439445_0035915
303 Ga0466971_0211654
304 Ga0466970_0008013
305 Ga0466970_0018672
306 Ga0466967_0001116
307 Ga0466967_0013013
308 Ga0466967_0156888
309 Ga0495590_0001922
310 Ga0495638_0112095
311 Ga0495625_0030411
312 Ga0495672_0109414
313 Ga0495672_0197801
314 Ga0495672_0236409
315 Ga0496100_0034146
316 Ga0496102_0132411
317 Ga0496102_0163866
318 Ga0496102_0285519
319 Ga0496103_0114279
320 Ga0496106_0040062
321 Ga0496107_0024644
322 Ga0496109_0057484
323 Ga0496111_0496265
324 Ga0496112_0032067
325 Ga0496113_0064321
326 Ga0496113_0089245
327 Ga0496115_0797298
328 Ga0496118_0081596
329 Ga0496119_0003938
330 Ga0496120_0001093
331 Ga0496121_0037310
332 Ga0496122_0000900
333 Ga0496122_0020280
334 Ga0496123_0003148
335 Ga0496123_0008296
336 Ga0496125_0357213
337 Ga0496126_0025682
338 Ga0501044_0153815
339 nmdc:mga03683_9395_c1
340 nmdc:mga03n38_38203_c1
341 nmdc:mga00v17_122318_c1
342 nmdc:mga00v17_2974_c1
343 nmdc:mga00v17_615_c1
344 nmdc:mga05p37_292611_c1
345 nmdc:mga09592_168442_c1
346 nmdc:mga0qj67_175902_c1
347 nmdc:mga0qj67_54651_c1
348 nmdc:mga06r32_12654_c1
349 nmdc:mga06r32_360917_c1
350 Ga0495655_0029687
351 Ga0500559_0001751
352 Ga0500559_0007877
353 Ga0500559_0032288
354 Ga0500559_0139983
355 Ga0500568_0011033
356 Ga0500573_0000001
357 Ga0500573_0005131
358 Ga0500573_0051010
359 Ga0500573_0052939
360 Ga0500573_0066136
361 Ga0500573_0068857
362 Ga0500573_0090575
363 Ga0500573_0190450
364 Ga0500616_0000027
365 Ga0500645_009133
366 Ga0466962_0094965
367 2964329628
368 2523382281
369 2643769429
370 2643874823
371 2644114043
372 2644231406
373 2644381879
374 2795796087
375 2808902689
376 2852646219
377 2857736465
378 2862993398
379 2870624508
380 2895660911
381 2939660082
382 2995727315
383 8055036720
384 8055040857

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00392

GntR

Bacterial regulatory proteins, gntR family

63

127

0.93

PF07729

FCD

FCD domain

156

277

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
5d4r-assembly1.cif.gz_A crystal structure of arar(dbd) in complex with operator ore1 0.9545 23 89
5d4s-assembly1.cif.gz_B crystal structure of arar(dbd) in complex with operator orx1 0.9517 23 89
4h0e-assembly1.cif.gz_A crystal structure of mutant orr3 in complex with ntd of arar 0.9504 23 89
4r1h-assembly1.cif.gz_B gntr family transcriptional regulator from listeria monocytogenes 0.9441 24 91
4egz-assembly1.cif.gz_B crystal structure of arar(dbd) in complex with operator orr3 0.9405 23 89
ID Description Score Start End Superfamily
af_P31460_2_70_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.967 22 89 1.10.10.10
5d4rA00 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9545 23 89 1.10.10.10
af_Q2G1P1_1_44_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9478 44 88 1.10.10.10
5d4sA00 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9465 23 89 1.10.10.10
af_P31475_2_79_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.945 22 89 1.10.10.10
ID Description Score Start End GO Terms
AF-A0A3E0WF13-F1-model_v4 GntR family transcriptional regulator 0.9386 1 239 GO:0003677
GO:0003700
AF-D2Q4B8-F1-model_v4 GntR domain protein 0.9371 10 239 GO:0003677
GO:0003700
AF-A0A3E0WF13-F1-model_v4 GntR family transcriptional regulator 0.9348 1 239 GO:0003677
GO:0003700
AF-A0A1M7HM52-F1-model_v4 Transcriptional regulator, GntR family 0.9309 5 239 GO:0003677
GO:0003700
AF-W6K496-F1-model_v4 Transcriptional regulator 0.9247 9 182 GO:0003677
GO:0003700

Map