F295752
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 192 | 155 | 184 | 348 |
Family's Representative Sequence
| Representative Sequence | 3300025915|Ga0207693_10301562|Ga0207693_103015621 |
| Length | 372 |
| Sequence | MANGVWSSSLTIRYSLFASAEKVTPMQIKTAQAAILARSREPLVVDEIALPEALDAGQVLVKVLHTTICGAQINEIDAVKGPDKFLPHLLGHEASAQVIEIGPGVTQVKPGDTVVLHWRPSRGIASRTPSYRWRGADLNAGWVTTFNDYAVVSENRMTVIPPDYNLRDAPLLGCAVTTAAGVINNDANVKIGESVVVFGVGGVGLNVVQFAELAGANPIVAVDLVDAKLDMAKSRGATHCLNGSAVSDMDAEIRKIVGAKGPDKVIETTGAKSVIELAYNLTHADGTCVLVGVPNQHITIDSLPIHFNKVLTGSHGGDCRPHIDIPRIVRLIAAGRMSLEGLITHEFPLANINDAIARARGGEAGRVLVNVE |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 2521172590 | Herbaspirillum sp. GW103 | Isolate | Rhizosphere |
| 2 | 2551306416 | Herbaspirillum seropedicae Os34 | Isolate | Unclassified |
| 3 | 2904439833 | Herbaspirillum sp. 1589 | Isolate | Rhizosphere |
| 4 | 2904530477 | Herbaspirillum huttiense 611 | Isolate | Unclassified |
| 5 | 2904584206 | Herbaspirillum sp. 1050 | Isolate | Unclassified |
| 6 | 2904589729 | Herbaspirillum sp. 1130 | Isolate | Unclassified |
| 7 | 2904601388 | Herbaspirillum sp. 1273 | Isolate | Rhizosphere |
| 8 | 2919079590 | Herbaspirillum sp. 1173 | Isolate | Unclassified |
| 9 | 3300002704 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mLB | Metagenome | Unclassified |
| 10 | 3300002705 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS | Metagenome | Unclassified |
| 11 | 3300002737 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA | Metagenome | Endosphere |
| 12 | 3300002738 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA | Metagenome | Unclassified |
| 13 | 3300002741 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL | Metagenome | Unclassified |
| 14 | 3300005329 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG | Metagenome | Rhizosphere |
| 15 | 3300005336 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG | Metagenome | Rhizosphere |
| 16 | 3300005337 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG | Metagenome | Rhizosphere |
| 17 | 3300005364 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG | Metagenome | Rhizosphere |
| 18 | 3300005435 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG | Metagenome | Rhizosphere |
| 19 | 3300005436 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG | Metagenome | Rhizosphere |
| 20 | 3300005437 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG | Metagenome | Rhizosphere |
| 21 | 3300005439 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG | Metagenome | Rhizosphere |
| 22 | 3300005457 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG | Metagenome | Rhizosphere |
| 23 | 3300005458 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG | Metagenome | Rhizosphere |
| 24 | 3300005468 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG | Metagenome | Rhizosphere |
| 25 | 3300005536 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG | Metagenome | Rhizosphere |
| 26 | 3300005545 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG | Metagenome | Rhizosphere |
| 27 | 3300005547 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG | Metagenome | Rhizosphere |
| 28 | 3300005548 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG | Metagenome | Rhizosphere |
| 29 | 3300005578 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 | Metagenome | Rhizosphere |
| 30 | 3300005614 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 | Metagenome | Rhizosphere |
| 31 | 3300005615 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG | Metagenome | Rhizosphere |
| 32 | 3300005937 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 | Metagenome | Rhizosphere |
| 33 | 3300006028 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG | Metagenome | Rhizosphere |
| 34 | 3300006038 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 | Metagenome | Endosphere |
| 35 | 3300006042 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 | Metagenome | Endosphere |
| 36 | 3300006048 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 | Metagenome | Endosphere |
| 37 | 3300006051 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 | Metagenome | Endosphere |
| 38 | 3300006175 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG | Metagenome | Rhizosphere |
| 39 | 3300006177 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 | Metagenome | Endosphere |
| 40 | 3300006844 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 | Metagenome | Rhizosphere |
| 41 | 3300006846 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 | Metagenome | Rhizosphere |
| 42 | 3300006847 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 | Metagenome | Rhizosphere |
| 43 | 3300006852 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 | Metagenome | Rhizosphere |
| 44 | 3300006871 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 | Metagenome | Rhizosphere |
| 45 | 3300006880 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 | Metagenome | Rhizosphere |
| 46 | 3300007076 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 | Metagenome | Rhizosphere |
| 47 | 3300007788 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 | Metagenome | Rhizosphere |
| 48 | 3300009094 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 49 | 3300009098 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG | Metagenome | Rhizosphere |
| 50 | 3300009147 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 51 | 3300009174 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG | Metagenome | Rhizosphere |
| 52 | 3300009177 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG | Metagenome | Rhizosphere |
| 53 | 3300009545 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG | Metagenome | Rhizosphere |
| 54 | 3300009551 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG | Metagenome | Rhizosphere |
| 55 | 3300009553 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG | Metagenome | Rhizosphere |
| 56 | 3300010375 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG | Metagenome | Rhizosphere |
| 57 | 3300013296 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG | Metagenome | Rhizosphere |
| 58 | 3300013297 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG | Metagenome | Rhizosphere |
| 59 | 3300013307 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG | Metagenome | Rhizosphere |
| 60 | 3300014326 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG | Metagenome | Rhizosphere |
| 61 | 3300014969 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG | Metagenome | Rhizosphere |
| 62 | 3300015261 | Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG | Metagenome | Rhizosphere |
| 63 | 3300021388 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 | Metagenome | Unclassified |
| 64 | 3300024225 | Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU5 | Metagenome | Rhizosphere |
| 65 | 3300025206 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mLB (SPAdes) (version 2) | Metagenome | Unclassified |
| 66 | 3300025233 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) | Metagenome | Endosphere |
| 67 | 3300025246 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) | Metagenome | Unclassified |
| 68 | 3300025250 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) | Metagenome | Unclassified |
| 69 | 3300025256 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) | Metagenome | Unclassified |
| 70 | 3300025261 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) | Metagenome | Endosphere |
| 71 | 3300025911 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 72 | 3300025912 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 73 | 3300025913 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 74 | 3300025914 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 75 | 3300025915 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 76 | 3300025916 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 77 | 3300025917 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 78 | 3300025919 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 79 | 3300025922 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 80 | 3300025924 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 81 | 3300025927 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 82 | 3300025929 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 83 | 3300025933 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 84 | 3300025939 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 85 | 3300025944 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 86 | 3300025949 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 87 | 3300025961 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 88 | 3300025981 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 89 | 3300026121 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 90 | 3300027907 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) | Metagenome | Rhizosphere |
| 91 | 3300028379 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 92 | 3300028653 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG | Metagenome | Rhizosphere |
| 93 | 3300028654 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG | Metagenome | Rhizosphere |
| 94 | 3300028800 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG | Metagenome | Rhizosphere |
| 95 | 3300029957 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG | Metagenome | Rhizosphere |
| 96 | 3300030763 | Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI5 (Metagenome Metatranscriptome) | Metatranscriptome | Rhizosphere |
| 97 | 3300031090 | Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) | Metatranscriptome | Rhizosphere |
| 98 | 3300031238 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG | Metagenome | Rhizosphere |
| 99 | 3300031249 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG | Metagenome | Rhizosphere |
| 100 | 3300031548 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 | Metagenome | Rhizosphere |
| 101 | 3300035114 | Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 | Metagenome | Rhizosphere |
| 102 | 3300035120 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 | Metagenome | Rhizosphere |
| 103 | 3300035691 | Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 | Metagenome | Rhizosphere |
| 104 | 3300035692 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 | Metagenome | Rhizosphere |
| 105 | 3300035724 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 | Metagenome | Rhizosphere |
| 106 | 3300037418 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 | Metagenome | Rhizosphere |
| 107 | 3300037853 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 | Metagenome | Unclassified |
| 108 | 3300038726 | Seagrass microbial communities from Seahorse Key, FL, USA - TH0319 | Metagenome | Unclassified |
| 109 | 3300039437 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 | Metagenome | Unclassified |
| 110 | 3300039438 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 | Metagenome | Rhizosphere |
| 111 | 3300039447 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 | Metagenome | Rhizosphere |
| 112 | 3300039450 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 | Metagenome | Unclassified |
| 113 | 3300041512 | White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG | Metagenome | Unclassified |
| 114 | 3300042876 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED | Metagenome | Rhizosphere |
| 115 | 3300044673 | Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED | Metagenome | Rhizosphere |
| 116 | 3300044712 | Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED | Metagenome | Rhizosphere |
| 117 | 3300045051 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED | Metagenome | Rhizosphere |
| 118 | 3300046460 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere | Metagenome | Rhizosphere |
| 119 | 3300046462 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere | Metagenome | Rhizosphere |
| 120 | 3300046533 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere | Metagenome | Rhizosphere |
| 121 | 3300046660 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere | Metagenome | Rhizosphere |
| 122 | 3300046684 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere | Metagenome | Rhizosphere |
| 123 | 3300047319 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere | Metagenome | Rhizosphere |
| 124 | 3300048904 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled | Metagenome | Rhizoplane |
| 125 | 3300048905 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 | Metagenome | Rhizoplane |
| 126 | 3300048907 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 | Metagenome | Rhizoplane |
| 127 | 3300048908 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 | Metagenome | Rhizoplane |
| 128 | 3300048910 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 | Metagenome | Rhizoplane |
| 129 | 3300048911 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled | Metagenome | Rhizoplane |
| 130 | 3300048914 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 | Metagenome | Rhizoplane |
| 131 | 3300048917 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 | Metagenome | Rhizoplane |
| 132 | 3300048918 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 | Metagenome | Rhizoplane |
| 133 | 3300048924 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 | Metagenome | Unclassified |
| 134 | 3300048929 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 | Metagenome | Unclassified |
| 135 | 3300049581 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 136 | 3300049823 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 137 | 3300050489 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation | Metagenome | Endosphere |
| 138 | 3300050492 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation | Metagenome | Endosphere |
| 139 | 3300050495 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation | Metagenome | Endosphere |
| 140 | 3300050507 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation | Metagenome | Rhizosphere |
| 141 | 3300050508 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation | Metagenome | Rhizosphere |
| 142 | 3300050509 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation | Metagenome | Rhizosphere |
| 143 | 3300050510 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation | Metagenome | Rhizosphere |
| 144 | 3300050511 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation | Metagenome | Rhizosphere |
| 145 | 3300050512 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation | Metagenome | Rhizosphere |
| 146 | 3300050515 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation | Metagenome | Rhizosphere |
| 147 | 3300050516 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation | Metagenome | Endosphere |
| 148 | 3300053077 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere | Metagenome | Rhizosphere |
| 149 | 3300053084 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere | Metagenome | Rhizosphere |
| 150 | 3300053088 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere | Metagenome | Endosphere |
| 151 | 3300053093 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere | Metagenome | Endosphere |
| 152 | 3300053119 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere | Metagenome | Endosphere |
| 153 | 3300053131 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere | Metagenome | Endosphere |
| 154 | 3300053153 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere | Metagenome | Endosphere |
| 155 | 3300053730 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere | Metagenome | Endosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 94.79 |
| Metatranscriptomes | 1.04 |
| Isolates | 4.17 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 11.46 |
| Nodule | 0 |
| Rhizoplane | 6.77 |
| Rhizosphere | 69.27 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 12.5 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | JGI25155J39150_1000243 | 3300002704 | Bacteria | 21172 |
| 2 | JGI25156J39149_1000239 | 3300002705 | Bacteria | 37942 |
| 3 | JGI25162J39368_1003131 | 3300002737 | Bacteria | 5222 |
| 4 | JGI25154J39366_1000090 | 3300002738 | Bacteria | 81884 |
| 5 | JGI25157J39369_1003594 | 3300002741 | Unclassified | 3102 |
| 6 | Ga0070683_100179255 | 3300005329 | Bacteria | 2011 |
| 7 | Ga0070680_100149425 | 3300005336 | Bacteria | 1961 |
| 8 | Ga0070682_100036564 | 3300005337 | Bacteria | 3002 |
| 9 | Ga0070673_100336601 | 3300005364 | Bacteria | 1336 |
| 10 | Ga0070714_100024482 | 3300005435 | Bacteria | 4973 |
| 11 | Ga0070713_100120537 | 3300005436 | Unclassified | 2300 |
| 12 | Ga0070713_100142886 | 3300005436 | Bacteria | 2121 |
| 13 | Ga0070710_10097767 | 3300005437 | Bacteria | 1743 |
| 14 | Ga0070711_100022069 | 3300005439 | Bacteria | 4123 |
| 15 | Ga0070662_100085029 | 3300005457 | Bacteria | 2364 |
| 16 | Ga0070681_10027304 | 3300005458 | Bacteria | 5739 |
| 17 | Ga0070707_100355247 | 3300005468 | Bacteria | 1423 |
| 18 | Ga0070697_100024287 | 3300005536 | Bacteria | 4824 |
| 19 | Ga0070695_100029764 | 3300005545 | Bacteria | 3395 |
| 20 | Ga0070695_100040887 | 3300005545 | Bacteria | 2937 |
| 21 | Ga0070695_100084001 | 3300005545 | Bacteria | 2111 |
| 22 | Ga0070693_100010697 | 3300005547 | Bacteria | 4601 |
| 23 | Ga0070665_100000719 | 3300005548 | Bacteria | 44046 |
| 24 | Ga0070665_100001775 | 3300005548 | Bacteria | 24559 |
| 25 | Ga0070665_100273540 | 3300005548 | Bacteria | 1691 |
| 26 | Ga0068854_100004263 | 3300005578 | Bacteria | 9008 |
| 27 | Ga0068856_100221565 | 3300005614 | Bacteria | 1907 |
| 28 | Ga0070702_100120795 | 3300005615 | Bacteria | 1640 |
| 29 | Ga0081455_10002164 | 3300005937 | Bacteria | 23439 |
| 30 | Ga0081455_10028590 | 3300005937 | Bacteria | 5094 |
| 31 | Ga0070717_10007734 | 3300006028 | Bacteria | 7996 |
| 32 | Ga0075365_10007882 | 3300006038 | Bacteria | 6000 |
| 33 | Ga0075368_10018342 | 3300006042 | Bacteria | 2629 |
| 34 | Ga0075363_100055061 | 3300006048 | Bacteria | 2130 |
| 35 | Ga0075364_10100737 | 3300006051 | Bacteria | 1923 |
| 36 | Ga0070712_100336560 | 3300006175 | Bacteria | 1231 |
| 37 | Ga0075362_10010172 | 3300006177 | Bacteria | 3665 |
| 38 | Ga0075428_100527089 | 3300006844 | Bacteria | 1263 |
| 39 | Ga0075430_100060232 | 3300006846 | Bacteria | 3191 |
| 40 | Ga0075431_100073696 | 3300006847 | Bacteria | 3522 |
| 41 | Ga0075431_100224356 | 3300006847 | Bacteria | 1916 |
| 42 | Ga0075433_10003335 | 3300006852 | Bacteria | 12408 |
| 43 | Ga0075434_100008426 | 3300006871 | Bacteria | 9589 |
| 44 | Ga0075434_100017535 | 3300006871 | Bacteria | 6902 |
| 45 | Ga0075429_100134801 | 3300006880 | Bacteria | 2161 |
| 46 | Ga0075435_100160416 | 3300007076 | Bacteria | 1894 |
| 47 | Ga0099795_10036059 | 3300007788 | Bacteria | 1733 |
| 48 | Ga0111539_10009669 | 3300009094 | Bacteria | 12169 |
| 49 | Ga0111539_10014388 | 3300009094 | Bacteria | 9874 |
| 50 | Ga0111539_10018646 | 3300009094 | Bacteria | 8594 |
| 51 | Ga0105245_10008635 | 3300009098 | Bacteria | 8886 |
| 52 | Ga0114129_10005982 | 3300009147 | Bacteria | 17233 |
| 53 | Ga0105241_10062622 | 3300009174 | Bacteria | 2868 |
| 54 | Ga0105248_10051013 | 3300009177 | Bacteria | 4643 |
| 55 | Ga0105237_10010081 | 3300009545 | Bacteria | 10078 |
| 56 | Ga0105237_10034120 | 3300009545 | Bacteria | 5155 |
| 57 | Ga0105238_10000038 | 3300009551 | Bacteria | 162920 |
| 58 | Ga0105238_10051370 | 3300009551 | Unclassified | 4147 |
| 59 | Ga0105249_10196277 | 3300009553 | Bacteria | 1973 |
| 60 | Ga0105239_10000303 | 3300010375 | Bacteria | 72769 |
| 61 | Ga0157374_10000625 | 3300013296 | Bacteria | 31123 |
| 62 | Ga0157378_10015112 | 3300013297 | Bacteria | 6758 |
| 63 | Ga0157372_10422393 | 3300013307 | Unclassified | 1554 |
| 64 | Ga0157380_10294131 | 3300014326 | Bacteria | 1493 |
| 65 | Ga0157376_10051777 | 3300014969 | Bacteria | 3411 |
| 66 | Ga0157376_10124520 | 3300014969 | Unclassified | 2290 |
| 67 | Ga0182006_1000579 | 3300015261 | Bacteria | 27007 |
| 68 | Ga0213875_10000003 | 3300021388 | Bacteria | 719367 |
| 69 | Ga0224572_1000118 | 3300024225 | Bacteria | 6332 |
| 70 | Ga0209435_100066 | 3300025206 | Bacteria | 71278 |
| 71 | Ga0209437_100282 | 3300025233 | Bacteria | 74881 |
| 72 | Ga0209646_1000133 | 3300025246 | Bacteria | 125401 |
| 73 | Ga0209026_1000566 | 3300025250 | Bacteria | 25032 |
| 74 | Ga0209759_1000187 | 3300025256 | Bacteria | 100012 |
| 75 | Ga0209233_1003592 | 3300025261 | Bacteria | 5438 |
| 76 | Ga0207654_10032940 | 3300025911 | Bacteria | 2868 |
| 77 | Ga0207707_10020748 | 3300025912 | Bacteria | 5739 |
| 78 | Ga0207695_10009890 | 3300025913 | Bacteria | 11720 |
| 79 | Ga0207671_10003602 | 3300025914 | Bacteria | 15309 |
| 80 | Ga0207693_10301562 | 3300025915 | Bacteria | 1255 |
| 81 | Ga0207663_10016118 | 3300025916 | Bacteria | 4136 |
| 82 | Ga0207663_10037797 | 3300025916 | Bacteria | 2913 |
| 83 | Ga0207660_10129041 | 3300025917 | Bacteria | 1923 |
| 84 | Ga0207657_10079616 | 3300025919 | Bacteria | 2757 |
| 85 | Ga0207646_10308404 | 3300025922 | Bacteria | 1430 |
| 86 | Ga0207694_10000126 | 3300025924 | Bacteria | 79243 |
| 87 | Ga0207687_10012620 | 3300025927 | Bacteria | 5519 |
| 88 | Ga0207664_10122833 | 3300025929 | Bacteria | 2175 |
| 89 | Ga0207706_10112726 | 3300025933 | Bacteria | 2392 |
| 90 | Ga0207665_10041664 | 3300025939 | Bacteria | 3068 |
| 91 | Ga0207665_10163404 | 3300025939 | Bacteria | 1603 |
| 92 | Ga0207661_10129059 | 3300025944 | Bacteria | 2163 |
| 93 | Ga0207667_10187970 | 3300025949 | Bacteria | 2120 |
| 94 | Ga0207712_10397132 | 3300025961 | Bacteria | 1158 |
| 95 | Ga0207640_10003848 | 3300025981 | Bacteria | 8099 |
| 96 | Ga0207683_10071033 | 3300026121 | Bacteria | 3077 |
| 97 | Ga0207428_10193458 | 3300027907 | Bacteria | 1533 |
| 98 | Ga0268266_10000275 | 3300028379 | Bacteria | 85106 |
| 99 | Ga0268266_10000650 | 3300028379 | Bacteria | 47092 |
| 100 | Ga0265323_10000796 | 3300028653 | Bacteria | 16901 |
| 101 | Ga0265322_10000176 | 3300028654 | Bacteria | 29265 |
| 102 | Ga0265338_10004728 | 3300028800 | Bacteria | 18222 |
| 103 | Ga0265338_10011303 | 3300028800 | Bacteria | 10331 |
| 104 | Ga0265338_10016719 | 3300028800 | Bacteria | 7949 |
| 105 | Ga0265338_10026471 | 3300028800 | Bacteria | 5847 |
| 106 | Ga0265324_10037693 | 3300029957 | Bacteria | 1679 |
| 107 | Ga0265763_1003037 | 3300030763 | Bacteria | 1314 |
| 108 | Ga0265760_10001784 | 3300031090 | Bacteria | 6320 |
| 109 | Ga0265332_10000022 | 3300031238 | Bacteria | 213072 |
| 110 | Ga0265339_10021622 | 3300031249 | Bacteria | 3738 |
| 111 | Ga0307408_100456889 | 3300031548 | Bacteria | 1109 |
| 112 | Ga0373939_0000825 | 3300035114 | Bacteria | 7672 |
| 113 | Ga0373957_0035638 | 3300035120 | Bacteria | 1850 |
| 114 | Ga0373931_0119475 | 3300035691 | Bacteria | 1505 |
| 115 | Ga0373935_0183774 | 3300035692 | Unclassified | 1437 |
| 116 | Ga0373933_0013985 | 3300035724 | Bacteria | 4453 |
| 117 | Ga0395900_0036772 | 3300037418 | Bacteria | 5047 |
| 118 | Ga0436364_0191605 | 3300037853 | Bacteria | 46122 |
| 119 | Ga0400490_56880 | 3300038726 | Bacteria | 13694 |
| 120 | Ga0436365_0176718 | 3300039437 | Bacteria | 3442 |
| 121 | Ga0436365_0325891 | 3300039437 | Bacteria | 1733 |
| 122 | Ga0436365_1236169 | 3300039437 | Bacteria | 8575 |
| 123 | Ga0436365_1498847 | 3300039437 | Bacteria | 3193 |
| 124 | Ga0436360_0361085 | 3300039438 | Bacteria | 2275 |
| 125 | Ga0436361_0236227 | 3300039447 | Bacteria | 1406 |
| 126 | Ga0436361_0911528 | 3300039447 | Bacteria | 3955 |
| 127 | Ga0436363_1052234 | 3300039450 | Bacteria | 7152 |
| 128 | Ga0451853_0570058 | 3300041512 | Bacteria | 1581 |
| 129 | Ga0451577_0001149 | 3300042876 | Bacteria | 37392 |
| 130 | Ga0451577_0008943 | 3300042876 | Bacteria | 9689 |
| 131 | Ga0453683_0015902 | 3300044673 | Bacteria | 4862 |
| 132 | Ga0453684_0000304 | 3300044712 | Bacteria | 207436 |
| 133 | Ga0453684_0014106 | 3300044712 | Bacteria | 12849 |
| 134 | Ga0451576_0001231 | 3300045051 | Bacteria | 45348 |
| 135 | Ga0495638_0115089 | 3300046460 | Bacteria | 1594 |
| 136 | Ga0495651_0037208 | 3300046462 | Bacteria | 3788 |
| 137 | Ga0495640_0040758 | 3300046533 | Bacteria | 3250 |
| 138 | Ga0495625_0149208 | 3300046660 | Bacteria | 1573 |
| 139 | Ga0495669_0043439 | 3300046684 | Bacteria | 2001 |
| 140 | Ga0495674_0114929 | 3300047319 | Bacteria | 2279 |
| 141 | Ga0496101_0035063 | 3300048904 | Bacteria | 3548 |
| 142 | Ga0496101_0229549 | 3300048904 | Bacteria | 1442 |
| 143 | Ga0496102_0012649 | 3300048905 | Bacteria | 7307 |
| 144 | Ga0496104_0023988 | 3300048907 | Bacteria | 5612 |
| 145 | Ga0496104_0069746 | 3300048907 | Bacteria | 3341 |
| 146 | Ga0496105_0021734 | 3300048908 | Bacteria | 5193 |
| 147 | Ga0496105_0177414 | 3300048908 | Bacteria | 1745 |
| 148 | Ga0496107_0077606 | 3300048910 | Bacteria | 2419 |
| 149 | Ga0496108_0137409 | 3300048911 | Bacteria | 2104 |
| 150 | Ga0496108_0333866 | 3300048911 | Bacteria | 1322 |
| 151 | Ga0496111_0099595 | 3300048914 | Bacteria | 2135 |
| 152 | Ga0496114_0033326 | 3300048917 | Bacteria | 4244 |
| 153 | Ga0496115_0122083 | 3300048918 | Bacteria | 2144 |
| 154 | Ga0496121_0002205 | 3300048924 | Bacteria | 30418 |
| 155 | Ga0496126_0138588 | 3300048929 | Bacteria | 2096 |
| 156 | Ga0501047_0107688 | 3300049581 | Bacteria | 2669 |
| 157 | Ga0501044_0394744 | 3300049823 | Bacteria | 1297 |
| 158 | nmdc:mga03683_25548_c1 | 3300050489 | Bacteria | 2322 |
| 159 | nmdc:mga0yw44_41043_c1 | 3300050492 | Bacteria | 2753 |
| 160 | nmdc:mga04h51_8896_c1 | 3300050495 | Bacteria | 2701 |
| 161 | nmdc:mga05p37_50958_c1 | 3300050507 | Bacteria | 5091 |
| 162 | nmdc:mga09592_108892_c1 | 3300050508 | Bacteria | 2376 |
| 163 | nmdc:mga0qj67_44512_c1 | 3300050509 | Bacteria | 3498 |
| 164 | nmdc:mga06r32_306859_c1 | 3300050510 | Bacteria | 1572 |
| 165 | nmdc:mga06r32_65395_c1 | 3300050510 | Bacteria | 3507 |
| 166 | nmdc:mga06r32_67350_c1 | 3300050510 | Bacteria | 3456 |
| 167 | nmdc:mga08y16_412591_c1 | 3300050511 | Unclassified | 1381 |
| 168 | nmdc:mga08y16_515912_c1 | 3300050511 | Bacteria | 1213 |
| 169 | nmdc:mga0n895_229731_c1 | 3300050512 | Bacteria | 1883 |
| 170 | nmdc:mga0n895_76841_c1 | 3300050512 | Bacteria | 3320 |
| 171 | nmdc:mga0a205_173129_c1 | 3300050515 | Bacteria | 2054 |
| 172 | nmdc:mga0sz30_14558_c1 | 3300050516 | Bacteria | 3098 |
| 173 | Ga0495601_0121006 | 3300053077 | Bacteria | 1700 |
| 174 | Ga0495595_0134554 | 3300053084 | Bacteria | 1210 |
| 175 | Ga0500644_0000482 | 3300053088 | Bacteria | 17537 |
| 176 | Ga0500651_0000457 | 3300053093 | Bacteria | 21745 |
| 177 | Ga0500651_0000557 | 3300053093 | Bacteria | 18965 |
| 178 | Ga0500651_0217327 | 3300053093 | Bacteria | 1122 |
| 179 | Ga0500595_005858 | 3300053119 | Bacteria | 5294 |
| 180 | Ga0500595_017992 | 3300053119 | Bacteria | 2594 |
| 181 | Ga0500595_025371 | 3300053119 | Bacteria | 2055 |
| 182 | Ga0500652_050224 | 3300053131 | Bacteria | 1701 |
| 183 | Ga0500616_0000001 | 3300053153 | Bacteria | 1986011 |
| 184 | Ga0500645_000998 | 3300053730 | Bacteria | 15961 |
Family Sequences
| Sample | Scaffold | Protein | Protein Length | |
|---|---|---|---|---|
| 1 | 3300025919 | Ga0207657_10079616 | Ga0207657_100796162 | 302 |
| 2 | 3300025939 | Ga0207665_10163404 | Ga0207665_101634041 | 316 |
| 3 | 3300039437 | Ga0436365_1498847 | Ga0436365_1498847_1676_2794 | 328 |
| 4 | 3300053093 | Ga0500651_0217327 | Ga0500651_0217327_17_1009 | 329 |
| 5 | 3300029957 | Ga0265324_10037693 | Ga0265324_100376932 | 330 |
| 6 | 3300031249 | Ga0265339_10021622 | Ga0265339_100216222 | 330 |
| 7 | 3300005937 | Ga0081455_10028590 | Ga0081455_100285902 | 331 |
| 8 | 3300031090 | Ga0265760_10001784 | Ga0265760_100017846 | 339 |
| 9 | 3300048918 | Ga0496115_0122083 | Ga0496115_0122083_711_1757 | 340 |
| 10 | 3300005336 | Ga0070680_100149425 | Ga0070680_1001494252 | 341 |
| 11 | 3300005337 | Ga0070682_100036564 | Ga0070682_1000365643 | 341 |
| 12 | 3300005439 | Ga0070711_100022069 | Ga0070711_1000220692 | 341 |
| 13 | 3300005457 | Ga0070662_100085029 | Ga0070662_1000850292 | 341 |
| 14 | 3300005458 | Ga0070681_10027304 | Ga0070681_100273043 | 341 |
| 15 | 3300005468 | Ga0070707_100355247 | Ga0070707_1003552471 | 341 |
| 16 | 3300005545 | Ga0070695_100040887 | Ga0070695_1000408872 | 341 |
| 17 | 3300005545 | Ga0070695_100084001 | Ga0070695_1000840012 | 341 |
| 18 | 3300005547 | Ga0070693_100010697 | Ga0070693_1000106974 | 341 |
| 19 | 3300005548 | Ga0070665_100001775 | Ga0070665_1000017759 | 341 |
| 20 | 3300005548 | Ga0070665_100273540 | Ga0070665_1002735401 | 341 |
| 21 | 3300005615 | Ga0070702_100120795 | Ga0070702_1001207952 | 341 |
| 22 | 3300005937 | Ga0081455_10002164 | Ga0081455_1000216414 | 341 |
| 23 | 3300009098 | Ga0105245_10008635 | Ga0105245_100086357 | 341 |
| 24 | 3300009174 | Ga0105241_10062622 | Ga0105241_100626222 | 341 |
| 25 | 3300009545 | Ga0105237_10034120 | Ga0105237_100341204 | 341 |
| 26 | 3300009553 | Ga0105249_10196277 | Ga0105249_101962772 | 341 |
| 27 | 3300013297 | Ga0157378_10015112 | Ga0157378_100151126 | 341 |
| 28 | 3300014969 | Ga0157376_10051777 | Ga0157376_100517773 | 341 |
| 29 | 3300014969 | Ga0157376_10124520 | Ga0157376_101245202 | 341 |
| 30 | 3300025911 | Ga0207654_10032940 | Ga0207654_100329402 | 341 |
| 31 | 3300025912 | Ga0207707_10020748 | Ga0207707_100207484 | 341 |
| 32 | 3300025915 | Ga0207693_10301562 | Ga0207693_103015621 | 341 |
| 33 | 3300025916 | Ga0207663_10016118 | Ga0207663_100161182 | 341 |
| 34 | 3300025916 | Ga0207663_10037797 | Ga0207663_100377974 | 341 |
| 35 | 3300025917 | Ga0207660_10129041 | Ga0207660_101290411 | 341 |
| 36 | 3300025922 | Ga0207646_10308404 | Ga0207646_103084042 | 341 |
| 37 | 3300025927 | Ga0207687_10012620 | Ga0207687_100126203 | 341 |
| 38 | 3300025933 | Ga0207706_10112726 | Ga0207706_101127262 | 341 |
| 39 | 3300025939 | Ga0207665_10041664 | Ga0207665_100416642 | 341 |
| 40 | 3300025949 | Ga0207667_10187970 | Ga0207667_101879702 | 341 |
| 41 | 3300025961 | Ga0207712_10397132 | Ga0207712_103971321 | 341 |
| 42 | 3300026121 | Ga0207683_10071033 | Ga0207683_100710331 | 341 |
| 43 | 3300028379 | Ga0268266_10000275 | Ga0268266_1000027530 | 341 |
| 44 | 3300046460 | Ga0495638_0115089 | Ga0495638_0115089_164_1207 | 341 |
| 45 | 3300046660 | Ga0495625_0149208 | Ga0495625_0149208_374_1417 | 341 |
| 46 | 3300048904 | Ga0496101_0035063 | Ga0496101_0035063_1679_2722 | 341 |
| 47 | 3300048905 | Ga0496102_0012649 | Ga0496102_0012649_5008_6051 | 341 |
| 48 | 3300048907 | Ga0496104_0069746 | Ga0496104_0069746_1907_2950 | 341 |
| 49 | 3300048908 | Ga0496105_0177414 | Ga0496105_0177414_524_1567 | 341 |
| 50 | 3300048910 | Ga0496107_0077606 | Ga0496107_0077606_848_1891 | 341 |
| 51 | 3300048924 | Ga0496121_0002205 | Ga0496121_0002205_10406_11449 | 341 |
| 52 | 3300048929 | Ga0496126_0138588 | Ga0496126_0138588_10_1053 | 341 |
| 53 | 3300053093 | Ga0500651_0000457 | Ga0500651_0000457_8957_10000 | 341 |
| 54 | 3300053093 | Ga0500651_0000557 | Ga0500651_0000557_1243_2286 | 341 |
| 55 | 3300053119 | Ga0500595_005858 | Ga0500595_005858_2506_3549 | 341 |
| 56 | 3300053119 | Ga0500595_017992 | Ga0500595_017992_1382_2425 | 341 |
| 57 | 3300053119 | Ga0500595_025371 | Ga0500595_025371_97_1140 | 341 |
| 58 | 3300053131 | Ga0500652_050224 | Ga0500652_050224_99_1142 | 341 |
| 59 | 3300053730 | Ga0500645_000998 | Ga0500645_000998_6392_7435 | 341 |
| 60 | 3300005329 | Ga0070683_100179255 | Ga0070683_1001792552 | 342 |
| 61 | 3300005435 | Ga0070714_100024482 | Ga0070714_1000244823 | 342 |
| 62 | 3300005436 | Ga0070713_100120537 | Ga0070713_1001205372 | 342 |
| 63 | 3300005436 | Ga0070713_100142886 | Ga0070713_1001428862 | 342 |
| 64 | 3300005437 | Ga0070710_10097767 | Ga0070710_100977672 | 342 |
| 65 | 3300006028 | Ga0070717_10007734 | Ga0070717_100077342 | 342 |
| 66 | 3300006038 | Ga0075365_10007882 | Ga0075365_100078824 | 342 |
| 67 | 3300006042 | Ga0075368_10018342 | Ga0075368_100183422 | 342 |
| 68 | 3300006048 | Ga0075363_100055061 | Ga0075363_1000550612 | 342 |
| 69 | 3300006051 | Ga0075364_10100737 | Ga0075364_101007371 | 342 |
| 70 | 3300006175 | Ga0070712_100336560 | Ga0070712_1003365601 | 342 |
| 71 | 3300006177 | Ga0075362_10010172 | Ga0075362_100101722 | 342 |
| 72 | 3300006846 | Ga0075430_100060232 | Ga0075430_1000602322 | 342 |
| 73 | 3300006847 | Ga0075431_100073696 | Ga0075431_1000736962 | 342 |
| 74 | 3300006871 | Ga0075434_100017535 | Ga0075434_1000175354 | 342 |
| 75 | 3300006880 | Ga0075429_100134801 | Ga0075429_1001348012 | 342 |
| 76 | 3300007076 | Ga0075435_100160416 | Ga0075435_1001604162 | 342 |
| 77 | 3300007788 | Ga0099795_10036059 | Ga0099795_100360592 | 342 |
| 78 | 3300009094 | Ga0111539_10009669 | Ga0111539_100096698 | 342 |
| 79 | 3300009094 | Ga0111539_10014388 | Ga0111539_100143884 | 342 |
| 80 | 3300009147 | Ga0114129_10005982 | Ga0114129_100059822 | 342 |
| 81 | 3300009551 | Ga0105238_10051370 | Ga0105238_100513702 | 342 |
| 82 | 3300013307 | Ga0157372_10422393 | Ga0157372_104223932 | 342 |
| 83 | 3300014326 | Ga0157380_10294131 | Ga0157380_102941312 | 342 |
| 84 | 3300021388 | Ga0213875_10000003 | Ga0213875_10000003370 | 342 |
| 85 | 3300024225 | Ga0224572_1000118 | Ga0224572_10001184 | 342 |
| 86 | 3300025261 | Ga0209233_1003592 | Ga0209233_10035925 | 342 |
| 87 | 3300025929 | Ga0207664_10122833 | Ga0207664_101228332 | 342 |
| 88 | 3300025944 | Ga0207661_10129059 | Ga0207661_101290592 | 342 |
| 89 | 3300027907 | Ga0207428_10193458 | Ga0207428_101934582 | 342 |
| 90 | 3300028653 | Ga0265323_10000796 | Ga0265323_1000079610 | 342 |
| 91 | 3300028654 | Ga0265322_10000176 | Ga0265322_100001769 | 342 |
| 92 | 3300028800 | Ga0265338_10004728 | Ga0265338_100047284 | 342 |
| 93 | 3300028800 | Ga0265338_10011303 | Ga0265338_100113034 | 342 |
| 94 | 3300028800 | Ga0265338_10016719 | Ga0265338_100167197 | 342 |
| 95 | 3300030763 | Ga0265763_1003037 | Ga0265763_10030372 | 342 |
| 96 | 3300035114 | Ga0373939_0000825 | Ga0373939_0000825_6168_7217 | 342 |
| 97 | 3300035691 | Ga0373931_0119475 | Ga0373931_0119475_113_1162 | 342 |
| 98 | 3300035692 | Ga0373935_0183774 | Ga0373935_0183774_244_1308 | 342 |
| 99 | 3300037853 | Ga0436364_0191605 | Ga0436364_0191605_44007_45053 | 342 |
| 100 | 3300039437 | Ga0436365_0176718 | Ga0436365_0176718_841_1887 | 342 |
| 101 | 3300039437 | Ga0436365_0325891 | Ga0436365_0325891_571_1626 | 342 |
| 102 | 3300039437 | Ga0436365_1236169 | Ga0436365_1236169_5261_6319 | 342 |
| 103 | 3300039447 | Ga0436361_0236227 | Ga0436361_0236227_187_1236 | 342 |
| 104 | 3300039447 | Ga0436361_0911528 | Ga0436361_0911528_891_1940 | 342 |
| 105 | 3300039450 | Ga0436363_1052234 | Ga0436363_1052234_5779_6828 | 342 |
| 106 | 3300042876 | Ga0451577_0001149 | Ga0451577_0001149_30872_31900 | 342 |
| 107 | 3300042876 | Ga0451577_0008943 | Ga0451577_0008943_1554_2582 | 342 |
| 108 | 3300044673 | Ga0453683_0015902 | Ga0453683_0015902_3683_4711 | 342 |
| 109 | 3300044712 | Ga0453684_0000304 | Ga0453684_0000304_64889_65917 | 342 |
| 110 | 3300044712 | Ga0453684_0014106 | Ga0453684_0014106_2800_3828 | 342 |
| 111 | 3300045051 | Ga0451576_0001231 | Ga0451576_0001231_31022_32050 | 342 |
| 112 | 3300046533 | Ga0495640_0040758 | Ga0495640_0040758_1938_3002 | 342 |
| 113 | 3300047319 | Ga0495674_0114929 | Ga0495674_0114929_1109_2173 | 342 |
| 114 | 3300048904 | Ga0496101_0229549 | Ga0496101_0229549_44_1093 | 342 |
| 115 | 3300048907 | Ga0496104_0023988 | Ga0496104_0023988_2914_3963 | 342 |
| 116 | 3300048908 | Ga0496105_0021734 | Ga0496105_0021734_1874_2923 | 342 |
| 117 | 3300048911 | Ga0496108_0137409 | Ga0496108_0137409_755_1804 | 342 |
| 118 | 3300048911 | Ga0496108_0333866 | Ga0496108_0333866_17_1066 | 342 |
| 119 | 3300048914 | Ga0496111_0099595 | Ga0496111_0099595_229_1278 | 342 |
| 120 | 3300048917 | Ga0496114_0033326 | Ga0496114_0033326_2893_3942 | 342 |
| 121 | 3300049581 | Ga0501047_0107688 | Ga0501047_0107688_1003_2049 | 342 |
| 122 | 3300050489 | nmdc:mga03683_25548_c1 | nmdc:mga03683_25548_c1_625_1674 | 342 |
| 123 | 3300050492 | nmdc:mga0yw44_41043_c1 | nmdc:mga0yw44_41043_c1_149_1198 | 342 |
| 124 | 3300050495 | nmdc:mga04h51_8896_c1 | nmdc:mga04h51_8896_c1_626_1675 | 342 |
| 125 | 3300050507 | nmdc:mga05p37_50958_c1 | nmdc:mga05p37_50958_c1_752_1795 | 342 |
| 126 | 3300050508 | nmdc:mga09592_108892_c1 | nmdc:mga09592_108892_c1_858_1907 | 342 |
| 127 | 3300050509 | nmdc:mga0qj67_44512_c1 | nmdc:mga0qj67_44512_c1_837_1886 | 342 |
| 128 | 3300050510 | nmdc:mga06r32_67350_c1 | nmdc:mga06r32_67350_c1_500_1549 | 342 |
| 129 | 3300050511 | nmdc:mga08y16_515912_c1 | nmdc:mga08y16_515912_c1_49_1098 | 342 |
| 130 | 3300050512 | nmdc:mga0n895_229731_c1 | nmdc:mga0n895_229731_c1_24_1091 | 342 |
| 131 | 3300050512 | nmdc:mga0n895_76841_c1 | nmdc:mga0n895_76841_c1_1489_2532 | 342 |
| 132 | 3300050515 | nmdc:mga0a205_173129_c1 | nmdc:mga0a205_173129_c1_215_1264 | 342 |
| 133 | 3300050516 | nmdc:mga0sz30_14558_c1 | nmdc:mga0sz30_14558_c1_1179_2228 | 342 |
| 134 | 3300053077 | Ga0495601_0121006 | Ga0495601_0121006_85_1134 | 342 |
| 135 | 3300053084 | Ga0495595_0134554 | Ga0495595_0134554_71_1120 | 342 |
| 136 | 3300053088 | Ga0500644_0000482 | Ga0500644_0000482_15853_16899 | 342 |
| 137 | 3300053153 | Ga0500616_0000001 | Ga0500616_0000001_1570816_1571862 | 342 |
| 138 | 3300049823 | Ga0501044_0394744 | Ga0501044_0394744_126_1172 | 343 |
| 139 | 3300005364 | Ga0070673_100336601 | Ga0070673_1003366012 | 344 |
| 140 | 3300005545 | Ga0070695_100029764 | Ga0070695_1000297644 | 344 |
| 141 | 3300005548 | Ga0070665_100000719 | Ga0070665_10000071927 | 344 |
| 142 | 3300006844 | Ga0075428_100527089 | Ga0075428_1005270891 | 344 |
| 143 | 3300006847 | Ga0075431_100224356 | Ga0075431_1002243562 | 344 |
| 144 | 3300006852 | Ga0075433_10003335 | Ga0075433_100033359 | 344 |
| 145 | 3300006871 | Ga0075434_100008426 | Ga0075434_1000084268 | 344 |
| 146 | 3300009094 | Ga0111539_10018646 | Ga0111539_100186467 | 344 |
| 147 | 3300028379 | Ga0268266_10000650 | Ga0268266_1000065045 | 344 |
| 148 | 3300028800 | Ga0265338_10026471 | Ga0265338_100264714 | 344 |
| 149 | 3300037418 | Ga0395900_0036772 | Ga0395900_0036772_1818_2870 | 344 |
| 150 | 3300038726 | Ga0400490_56880 | Ga0400490_56880_11632_12699 | 344 |
| 151 | 3300039438 | Ga0436360_0361085 | Ga0436360_0361085_482_1537 | 344 |
| 152 | 3300046684 | Ga0495669_0043439 | Ga0495669_0043439_306_1346 | 344 |
| 153 | 3300050510 | nmdc:mga06r32_306859_c1 | nmdc:mga06r32_306859_c1_268_1302 | 344 |
| 154 | 3300050510 | nmdc:mga06r32_65395_c1 | nmdc:mga06r32_65395_c1_2069_3115 | 344 |
| 155 | 3300050511 | nmdc:mga08y16_412591_c1 | nmdc:mga08y16_412591_c1_296_1330 | 344 |
| 156 | 3300002704 | JGI25155J39150_1000243 | JGI25155J39150_10002437 | 345 |
| 157 | 3300002705 | JGI25156J39149_1000239 | JGI25156J39149_10002397 | 345 |
| 158 | 3300002737 | JGI25162J39368_1003131 | JGI25162J39368_10031313 | 345 |
| 159 | 3300002738 | JGI25154J39366_1000090 | JGI25154J39366_100009048 | 345 |
| 160 | 3300002741 | JGI25157J39369_1003594 | JGI25157J39369_10035944 | 345 |
| 161 | 3300005536 | Ga0070697_100024287 | Ga0070697_1000242874 | 345 |
| 162 | 3300005578 | Ga0068854_100004263 | Ga0068854_1000042636 | 345 |
| 163 | 3300005614 | Ga0068856_100221565 | Ga0068856_1002215651 | 345 |
| 164 | 3300009177 | Ga0105248_10051013 | Ga0105248_100510132 | 345 |
| 165 | 3300009545 | Ga0105237_10010081 | Ga0105237_100100816 | 345 |
| 166 | 3300009551 | Ga0105238_10000038 | Ga0105238_10000038145 | 345 |
| 167 | 3300010375 | Ga0105239_10000303 | Ga0105239_1000030338 | 345 |
| 168 | 3300013296 | Ga0157374_10000625 | Ga0157374_1000062511 | 345 |
| 169 | 3300015261 | Ga0182006_1000579 | Ga0182006_100057920 | 345 |
| 170 | 3300025206 | Ga0209435_100066 | Ga0209435_10006631 | 345 |
| 171 | 3300025233 | Ga0209437_100282 | Ga0209437_10028235 | 345 |
| 172 | 3300025246 | Ga0209646_1000133 | Ga0209646_100013337 | 345 |
| 173 | 3300025250 | Ga0209026_1000566 | Ga0209026_100056612 | 345 |
| 174 | 3300025256 | Ga0209759_1000187 | Ga0209759_100018775 | 345 |
| 175 | 3300025913 | Ga0207695_10009890 | Ga0207695_100098908 | 345 |
| 176 | 3300025914 | Ga0207671_10003602 | Ga0207671_1000360213 | 345 |
| 177 | 3300025924 | Ga0207694_10000126 | Ga0207694_1000012640 | 345 |
| 178 | 3300025981 | Ga0207640_10003848 | Ga0207640_100038483 | 345 |
| 179 | 3300031238 | Ga0265332_10000022 | Ga0265332_10000022128 | 345 |
| 180 | 3300031548 | Ga0307408_100456889 | Ga0307408_1004568891 | 345 |
| 181 | 3300035120 | Ga0373957_0035638 | Ga0373957_0035638_665_1702 | 345 |
| 182 | 3300035724 | Ga0373933_0013985 | Ga0373933_0013985_1815_2852 | 345 |
| 183 | 3300041512 | Ga0451853_0570058 | Ga0451853_0570058_123_1181 | 345 |
| 184 | 3300046462 | Ga0495651_0037208 | Ga0495651_0037208_217_1254 | 345 |
| 185 | iso_pu_bacteria | 2521172590 | 2521557140 | 345 |
| 186 | iso_pu_bacteria | 2551306416 | 2553005156 | 345 |
| 187 | iso_pu_bacteria | 2904439833 | 2904442572 | 345 |
| 188 | iso_pu_bacteria | 2904530477 | 2904535221 | 345 |
| 189 | iso_pu_bacteria | 2904584206 | 2904589564 | 345 |
| 190 | iso_pu_bacteria | 2904589729 | 2904594472 | 345 |
| 191 | iso_pu_bacteria | 2904601388 | 2904606270 | 345 |
| 192 | iso_pu_bacteria | 2919079590 | 2919084219 | 345 |
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 1hdy-assembly1.cif.gz_B | three-dimensional structures of three human alcohol dehydrogenase variants: correlations with their functional differences | 0.9277 | 2 | 343 |
| 5kj6-assembly1.cif.gz_B | v197i horse liver alcohol dehydrogenase complexed with nad+ and pentafluorobenzyl alcohol | 0.9246 | 2 | 343 |
| 5kje-assembly1.cif.gz_B | f322l horse liver alcohol dehydrogenase complexed with nad+ and pentafluorobenzyl alcohol | 0.9243 | 2 | 343 |
| 5cds-assembly1.cif.gz_B | i220l horse liver alcohol dehydrogenase complexed with nad and pentafluorobenzyl alcohol | 0.9239 | 2 | 343 |
| 6oa7-assembly1.cif.gz_B | horse liver l57f alcohol dehydrogenase e complexed with nad and trifluoroethanol | 0.9239 | 2 | 343 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| af_K7MH10_157_229_3.90.180.10 | Alpha Beta;Alpha-Beta Complex;Quinone Oxidoreductase; Chain A, domain 1;Medium-chain alcohol dehydrogenases, catalytic domain | 0.9387 | 150 | 211 | 3.90.180.10 |
| af_B4G1G0_229_356_3.40.50.720 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain | 0.9322 | 157 | 282 | 3.40.50.720 |
| 5tnxA02 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain | 0.9207 | 150 | 284 | 3.40.50.720 |
| 6adhA02 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain | 0.9189 | 150 | 284 | 3.40.50.720 |
| af_A1L4Y2_14_383_3.90.180.10 | Alpha Beta;Alpha-Beta Complex;Quinone Oxidoreductase; Chain A, domain 1;Medium-chain alcohol dehydrogenases, catalytic domain | 0.9184 | 4 | 336 | 3.90.180.10 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A382EYP1-F1-model_v4 | Enoyl reductase (ER) domain-containing protein | 0.9872 | 2 | 281 |
GO:0008270
GO:0016491 |
| AF-A0A382YBF7-F1-model_v4 | Alcohol dehydrogenase-like C-terminal domain-containing protein | 0.9839 | 50 | 311 |
GO:0005829
GO:0008270 GO:0046294 GO:0051903 |
| AF-A0A6B3ENM0-F1-model_v4 | Zinc-binding dehydrogenase | 0.9807 | 130 | 217 |
GO:0005829
GO:0008270 GO:0046294 GO:0051903 |
| AF-A0A1J3H6W4-F1-model_v4 | Alcohol dehydrogenase class-3 | 0.9737 | 114 | 211 |
GO:0005829
GO:0008270 GO:0046294 GO:0051903 |
| AF-A0A382YBF7-F1-model_v4 | Alcohol dehydrogenase-like C-terminal domain-containing protein | 0.9693 | 50 | 311 |
GO:0005829
GO:0008270 GO:0046294 GO:0051903 |
Predicted Structure (AlphaFold2)
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