F295408

General Info

Members Datasets Scaffolds Average Seq Length
192 131 384 208

Family's Representative Sequence

Representative Sequence 3300005937|Ga0081455_10409006|Ga0081455_104090061
Length 200
Sequence MSHVALVHLDESCLGNGREGENPGGAGGLIEVRSGRRIQRRDFYVHSPHTTNNRMALLGATRALQLLAAKGNRLRVLLVSDSEYLVKGMRQWVPGWAARGPIENLALWQELADAARLHDVQWTWVRGHAKHVKNEYADGLSVGAAREQKTSRGAVESGFLEWLAARQARGLYSGYDPDVDFEQVERRLAAGEAFALSERS

Samples

Sample ID Description Type Environment
1 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
2 2162886012 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v1 Metagenome Rhizosphere
3 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
4 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
5 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
6 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
7 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
8 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
9 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
10 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
11 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
12 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
13 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
14 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
15 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
16 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
17 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
18 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
19 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
20 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
21 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
22 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
23 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
24 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
25 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
26 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
27 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
28 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
29 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
30 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
31 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
41 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
42 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
45 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
46 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
47 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
48 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
50 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
51 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
52 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
53 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
54 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
55 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
56 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
57 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
58 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
59 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
60 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
61 3300034816 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_3 Metagenome Rhizosphere
62 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
63 3300035088 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_4 Metagenome Rhizosphere
64 3300035115 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_11 Metagenome Rhizosphere
65 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
66 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
67 3300038996 Genetically engineered switchgrass root microbial communities from Knoxville, USA - plot19 Metagenome Rhizosphere
68 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
69 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
70 3300042012 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z062817_5213 Metagenome Rhizosphere
71 3300042147 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627W_E14_080116_2618 Metagenome Rhizosphere
72 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
73 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
74 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
75 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
76 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
77 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
78 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
79 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
80 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
81 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
82 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
83 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
84 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
85 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
86 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
87 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
88 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
89 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
90 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
91 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
92 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
93 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
94 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
95 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
96 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
97 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
98 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
99 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
100 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
101 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
102 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
103 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
104 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
105 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
106 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
107 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
108 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
109 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
110 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
111 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
112 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
113 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
114 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
115 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
116 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
117 3300049678 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H12_B_3_drought Metagenome Rhizosphere
118 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
119 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
120 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
121 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
122 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
123 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
124 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
125 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
126 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
127 3300059423 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 8_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
128 3300059424 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 10_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
129 3300059426 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 11_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
130 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
131 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 6.25
Rhizosphere 93.75
Stem 0
Stem Tuber 0
Unclassified 20.31

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0081455_10409006 3300005937 Bacteria 939
2 MBSR1b_contig_12478199 2162886012 Bacteria 838
3 Ga0070692_10304111 3300005345 Unclassified 975
4 Ga0070675_100752216 3300005354 Unclassified 889
5 Ga0070705_100054366 3300005440 Bacteria 2348
6 Ga0070694_100065725 3300005444 Bacteria 2486
7 Ga0070694_100190665 3300005444 Bacteria 1522
8 Ga0070681_10436638 3300005458 Unclassified 1221
9 Ga0070706_100006142 3300005467 Bacteria 11366
10 Ga0070706_100079001 3300005467 Bacteria 3045
11 Ga0070707_100251166 3300005468 Unclassified 1721
12 Ga0070707_100460207 3300005468 Bacteria 1233
13 Ga0070698_100017842 3300005471 Bacteria 7476
14 Ga0070699_100003127 3300005518 Bacteria 14651
15 Ga0070699_100072646 3300005518 Bacteria 2993
16 Ga0070684_100330289 3300005535 Bacteria 1401
17 Ga0070697_100016545 3300005536 Bacteria 5802
18 Ga0070697_100041144 3300005536 Bacteria 3739
19 Ga0070695_100022682 3300005545 Bacteria 3852
20 Ga0070695_100371856 3300005545 Bacteria 1076
21 Ga0070695_100432128 3300005545 Bacteria 1005
22 Ga0070696_100002099 3300005546 Bacteria 13098
23 Ga0070704_100376309 3300005549 Bacteria 1205
24 Ga0070704_100943285 3300005549 Unclassified 778
25 Ga0070664_100027739 3300005564 Bacteria 4707
26 Ga0068854_100265665 3300005578 Bacteria 1376
27 Ga0070702_100116328 3300005615 Bacteria 1667
28 Ga0081455_10044066 3300005937 Bacteria 3896
29 Ga0075430_100078633 3300006846 Bacteria 2765
30 Ga0075430_100081267 3300006846 Bacteria 2715
31 Ga0075431_100057271 3300006847 Bacteria 4020
32 Ga0075433_10007249 3300006852 Bacteria 8786
33 Ga0068865_100514709 3300006881 Bacteria 1000
34 Ga0111539_10070542 3300009094 Bacteria 4125
35 Ga0114129_10086224 3300009147 Bacteria 4355
36 Ga0114129_10825811 3300009147 Unclassified 1180
37 Ga0105248_10797448 3300009177 Bacteria 1066
38 Ga0105248_11233569 3300009177 Unclassified 846
39 Ga0105249_11035536 3300009553 Bacteria 890
40 Ga0157375_10711025 3300013308 Bacteria 1158
41 Ga0182008_10083990 3300014497 Unclassified 1568
42 Ga0163161_10366861 3300017792 Bacteria 1148
43 Ga0207642_10195579 3300025899 Bacteria 1113
44 Ga0207684_10046292 3300025910 Bacteria 3690
45 Ga0207684_10070744 3300025910 Bacteria 2965
46 Ga0207663_10024452 3300025916 Bacteria 3479
47 Ga0207646_10048713 3300025922 Bacteria 3797
48 Ga0207646_10464002 3300025922 Bacteria 1142
49 Ga0207681_10500649 3300025923 Unclassified 995
50 Ga0207644_10007694 3300025931 Bacteria 7029
51 Ga0207669_10266225 3300025937 Bacteria 1285
52 Ga0207691_10119344 3300025940 Bacteria 2339
53 Ga0207661_10079466 3300025944 Bacteria 2703
54 Ga0207640_10281573 3300025981 Bacteria 1306
55 Ga0207677_10795022 3300026023 Bacteria 846
56 Ga0207678_10217392 3300026067 Bacteria 1635
57 Ga0207708_10361806 3300026075 Bacteria 1193
58 Ga0207641_10576205 3300026088 Unclassified 1100
59 Ga0207676_10029612 3300026095 Bacteria 4101
60 Ga0207674_10292349 3300026116 Bacteria 1578
61 Ga0207675_100111983 3300026118 Bacteria 2575
62 Ga0207683_10439375 3300026121 Unclassified 1202
63 Ga0307408_100093171 3300031548 Unclassified 2278
64 Ga0307408_100186107 3300031548 Bacteria 1669
65 Ga0307408_100222196 3300031548 Bacteria 1542
66 Ga0307405_10020975 3300031731 Bacteria 3664
67 Ga0307405_10163523 3300031731 Unclassified 1579
68 Ga0307413_10013992 3300031824 Bacteria 4058
69 Ga0307413_10024511 3300031824 Bacteria 3290
70 Ga0307413_10219931 3300031824 Unclassified 1386
71 Ga0307413_10239101 3300031824 Bacteria 1339
72 Ga0307410_10007947 3300031852 Bacteria 5848
73 Ga0307410_10013607 3300031852 Bacteria 4754
74 Ga0307410_10025009 3300031852 Unclassified 3739
75 Ga0307410_10044810 3300031852 Bacteria 2941
76 Ga0307410_10078161 3300031852 Bacteria 2315
77 Ga0307410_10103251 3300031852 Bacteria 2047
78 Ga0307410_10526270 3300031852 Bacteria 976
79 Ga0307410_10593460 3300031852 Bacteria 923
80 Ga0307410_10635592 3300031852 Unclassified 894
81 Ga0307406_10028552 3300031901 Unclassified 3372
82 Ga0307407_10039950 3300031903 Bacteria 2612
83 Ga0307407_10069999 3300031903 Bacteria 2084
84 Ga0307407_10158086 3300031903 Unclassified 1480
85 Ga0307407_10300180 3300031903 Bacteria 1119
86 Ga0307412_10022836 3300031911 Unclassified 3842
87 Ga0307412_10079618 3300031911 Bacteria 2261
88 Ga0307409_100020270 3300031995 Bacteria 4528
89 Ga0307409_100031690 3300031995 Unclassified 3820
90 Ga0307409_100055221 3300031995 Bacteria 3065
91 Ga0307409_100070885 3300031995 Bacteria 2768
92 Ga0307409_100147622 3300031995 Bacteria 2036
93 Ga0307409_100275212 3300031995 Bacteria 1553
94 Ga0307409_100537544 3300031995 Bacteria 1145
95 Ga0307416_100038011 3300032002 Unclassified 3709
96 Ga0307416_100116901 3300032002 Bacteria 2366
97 Ga0307416_101563129 3300032002 Bacteria 765
98 Ga0307414_10032972 3300032004 Bacteria 3417
99 Ga0307414_10056389 3300032004 Bacteria 2756
100 Ga0307414_10111562 3300032004 Bacteria 2083
101 Ga0307414_10150016 3300032004 Bacteria 1838
102 Ga0307414_10180112 3300032004 Bacteria 1699
103 Ga0307411_10003177 3300032005 Bacteria 7553
104 Ga0307411_10015898 3300032005 Unclassified 4243
105 Ga0307411_10055964 3300032005 Bacteria 2597
106 Ga0307411_10087968 3300032005 Bacteria 2159
107 Ga0307411_10220417 3300032005 Unclassified 1471
108 Ga0307411_10613942 3300032005 Unclassified 937
109 Ga0307411_11110577 3300032005 Unclassified 713
110 Ga0307415_100176059 3300032126 Bacteria 1673
111 Ga0373930_0035571 3300034816 Unclassified 1042
112 Ga0373926_0203685 3300035083 Unclassified 762
113 Ga0373940_0033790 3300035088 Unclassified 1377
114 Ga0373941_0065120 3300035115 Bacteria 1196
115 Ga0373931_0071659 3300035691 Bacteria 1893
116 Ga0395905_0265426 3300037471 Bacteria 1602
117 Ga0242420_000150 3300038996 Bacteria 7186
118 Ga0439439_0025225 3300041406 Bacteria 1496
119 Ga0451807_0753713 3300041486 Bacteria 905
120 Ga0439455_0008579 3300042012 Bacteria 2194
121 Ga0450910_005013 3300042147 Bacteria 1800
122 Ga0439446_0183526 3300042156 Unclassified 700
123 Ga0439434_0091200 3300042435 Unclassified 974
124 Ga0451577_0004140 3300042876 Bacteria 15542
125 Ga0453684_0858714 3300044712 Unclassified 975
126 Ga0495592_0242154 3300046454 Bacteria 1196
127 Ga0495603_0031650 3300046455 Bacteria 3185
128 Ga0495641_0022124 3300046461 Bacteria 3186
129 Ga0495580_0014743 3300046472 Bacteria 5924
130 Ga0495582_0038655 3300046473 Bacteria 2626
131 Ga0495639_0005859 3300046475 Bacteria 5283
132 Ga0495662_0012045 3300046476 Bacteria 4226
133 Ga0495594_0003568 3300046499 Bacteria 8003
134 Ga0495618_0025281 3300046514 Bacteria 3684
135 Ga0495630_0004043 3300046517 Bacteria 10266
136 Ga0495666_0000862 3300046526 Bacteria 14127
137 Ga0495665_0146044 3300046531 Bacteria 1235
138 Ga0495640_0068815 3300046533 Bacteria 2381
139 Ga0495586_0011915 3300046535 Bacteria 4618
140 Ga0495634_0010840 3300046642 Bacteria 6664
141 Ga0495635_0505421 3300046663 Bacteria 795
142 Ga0495647_0010674 3300046681 Bacteria 3131
143 Ga0495658_0003363 3300046683 Bacteria 7927
144 Ga0495613_0039952 3300046689 Bacteria 3476
145 Ga0495624_0184284 3300046690 Unclassified 1271
146 Ga0495581_0049986 3300047315 Bacteria 2415
147 Ga0495636_0179347 3300047318 Bacteria 961
148 Ga0495674_0008071 3300047319 Bacteria 10050
149 Ga0495676_0075930 3300047321 Bacteria 2568
150 Ga0495680_0004092 3300047322 Bacteria 14049
151 Ga0495684_0024355 3300047471 Bacteria 4660
152 Ga0496101_0363697 3300048904 Bacteria 1137
153 Ga0496101_0666808 3300048904 Unclassified 822
154 Ga0496102_0052504 3300048905 Unclassified 3715
155 Ga0496102_0260747 3300048905 Bacteria 1634
156 Ga0496102_0863313 3300048905 Unclassified 827
157 Ga0496103_0056241 3300048906 Bacteria 2442
158 Ga0496106_0241507 3300048909 Bacteria 1443
159 Ga0496106_0363980 3300048909 Bacteria 1162
160 Ga0496106_0673629 3300048909 Bacteria 826
161 Ga0496107_0243941 3300048910 Bacteria 1337
162 Ga0496114_0252833 3300048917 Bacteria 1551
163 Ga0501038_0058437 3300049574 Bacteria 3307
164 Ga0501039_0292473 3300049575 Bacteria 1280
165 Ga0501040_0571360 3300049576 Unclassified 816
166 Ga0501042_0049323 3300049578 Unclassified 3003
167 Ga0501046_0014683 3300049580 Bacteria 6597
168 Ga0501069_0008232 3300049585 Bacteria 5475
169 Ga0501075_0005962 3300049591 Bacteria 8341
170 Ga0501075_0113461 3300049591 Bacteria 2061
171 Ga0501076_0005220 3300049592 Bacteria 9310
172 Ga0501077_0000181 3300049593 Bacteria 36197
173 Ga0501077_0117340 3300049593 Archaea 1687
174 Ga0501248_005036 3300049678 Bacteria 1024
175 Ga0501079_0025997 3300049741 Bacteria 4489
176 Ga0501081_0017349 3300049743 Bacteria 4764
177 Ga0501035_0398822 3300049822 Bacteria 1145
178 Ga0501045_0004694 3300049824 Bacteria 9439
179 nmdc:mga0qj67_216034_c1 3300050509 Unclassified 1557
180 nmdc:mga06r32_2816_c1 3300050510 Bacteria 15591
181 nmdc:mga06r32_741481_c1 3300050510 Unclassified 946
182 nmdc:mga0a205_18596_c1 3300050515 Bacteria 6537
183 nmdc:mga0a205_97585_c1 3300050515 Bacteria 2837
184 Ga0495619_0248016 3300053085 Bacteria 1234
185 Ga0501084_0039206 3300054114 Bacteria 3962
186 Ga0590074_006415 3300059423 Bacteria 1952
187 Ga0590075_018832 3300059424 Bacteria 1710
188 Ga0590077_007444 3300059426 Bacteria 2239
189 Ga0590077_020320 3300059426 Bacteria 1410
190 Ga0501082_0030606 3300060353 Bacteria 4638
191 Ga0501082_0264764 3300060353 Bacteria 1496
192 Ga0530510_0052223 3300061734 Bacteria 2954
193 Ga0081455_10409006
194 MBSR1b_contig_12478199
195 Ga0070692_10304111
196 Ga0070675_100752216
197 Ga0070705_100054366
198 Ga0070694_100065725
199 Ga0070694_100190665
200 Ga0070681_10436638
201 Ga0070706_100006142
202 Ga0070706_100079001
203 Ga0070707_100251166
204 Ga0070707_100460207
205 Ga0070698_100017842
206 Ga0070699_100003127
207 Ga0070699_100072646
208 Ga0070684_100330289
209 Ga0070697_100016545
210 Ga0070697_100041144
211 Ga0070695_100022682
212 Ga0070695_100371856
213 Ga0070695_100432128
214 Ga0070696_100002099
215 Ga0070704_100376309
216 Ga0070704_100943285
217 Ga0070664_100027739
218 Ga0068854_100265665
219 Ga0070702_100116328
220 Ga0081455_10044066
221 Ga0075430_100078633
222 Ga0075430_100081267
223 Ga0075431_100057271
224 Ga0075433_10007249
225 Ga0068865_100514709
226 Ga0111539_10070542
227 Ga0114129_10086224
228 Ga0114129_10825811
229 Ga0105248_10797448
230 Ga0105248_11233569
231 Ga0105249_11035536
232 Ga0157375_10711025
233 Ga0182008_10083990
234 Ga0163161_10366861
235 Ga0207642_10195579
236 Ga0207684_10046292
237 Ga0207684_10070744
238 Ga0207663_10024452
239 Ga0207646_10048713
240 Ga0207646_10464002
241 Ga0207681_10500649
242 Ga0207644_10007694
243 Ga0207669_10266225
244 Ga0207691_10119344
245 Ga0207661_10079466
246 Ga0207640_10281573
247 Ga0207677_10795022
248 Ga0207678_10217392
249 Ga0207708_10361806
250 Ga0207641_10576205
251 Ga0207676_10029612
252 Ga0207674_10292349
253 Ga0207675_100111983
254 Ga0207683_10439375
255 Ga0307408_100093171
256 Ga0307408_100186107
257 Ga0307408_100222196
258 Ga0307405_10020975
259 Ga0307405_10163523
260 Ga0307413_10013992
261 Ga0307413_10024511
262 Ga0307413_10219931
263 Ga0307413_10239101
264 Ga0307410_10007947
265 Ga0307410_10013607
266 Ga0307410_10025009
267 Ga0307410_10044810
268 Ga0307410_10078161
269 Ga0307410_10103251
270 Ga0307410_10526270
271 Ga0307410_10593460
272 Ga0307410_10635592
273 Ga0307406_10028552
274 Ga0307407_10039950
275 Ga0307407_10069999
276 Ga0307407_10158086
277 Ga0307407_10300180
278 Ga0307412_10022836
279 Ga0307412_10079618
280 Ga0307409_100020270
281 Ga0307409_100031690
282 Ga0307409_100055221
283 Ga0307409_100070885
284 Ga0307409_100147622
285 Ga0307409_100275212
286 Ga0307409_100537544
287 Ga0307416_100038011
288 Ga0307416_100116901
289 Ga0307416_101563129
290 Ga0307414_10032972
291 Ga0307414_10056389
292 Ga0307414_10111562
293 Ga0307414_10150016
294 Ga0307414_10180112
295 Ga0307411_10003177
296 Ga0307411_10015898
297 Ga0307411_10055964
298 Ga0307411_10087968
299 Ga0307411_10220417
300 Ga0307411_10613942
301 Ga0307411_11110577
302 Ga0307415_100176059
303 Ga0373930_0035571
304 Ga0373926_0203685
305 Ga0373940_0033790
306 Ga0373941_0065120
307 Ga0373931_0071659
308 Ga0395905_0265426
309 Ga0242420_000150
310 Ga0439439_0025225
311 Ga0451807_0753713
312 Ga0439455_0008579
313 Ga0450910_005013
314 Ga0439446_0183526
315 Ga0439434_0091200
316 Ga0451577_0004140
317 Ga0453684_0858714
318 Ga0495592_0242154
319 Ga0495603_0031650
320 Ga0495641_0022124
321 Ga0495580_0014743
322 Ga0495582_0038655
323 Ga0495639_0005859
324 Ga0495662_0012045
325 Ga0495594_0003568
326 Ga0495618_0025281
327 Ga0495630_0004043
328 Ga0495666_0000862
329 Ga0495665_0146044
330 Ga0495640_0068815
331 Ga0495586_0011915
332 Ga0495634_0010840
333 Ga0495635_0505421
334 Ga0495647_0010674
335 Ga0495658_0003363
336 Ga0495613_0039952
337 Ga0495624_0184284
338 Ga0495581_0049986
339 Ga0495636_0179347
340 Ga0495674_0008071
341 Ga0495676_0075930
342 Ga0495680_0004092
343 Ga0495684_0024355
344 Ga0496101_0363697
345 Ga0496101_0666808
346 Ga0496102_0052504
347 Ga0496102_0260747
348 Ga0496102_0863313
349 Ga0496103_0056241
350 Ga0496106_0241507
351 Ga0496106_0363980
352 Ga0496106_0673629
353 Ga0496107_0243941
354 Ga0496114_0252833
355 Ga0501038_0058437
356 Ga0501039_0292473
357 Ga0501040_0571360
358 Ga0501042_0049323
359 Ga0501046_0014683
360 Ga0501069_0008232
361 Ga0501075_0005962
362 Ga0501075_0113461
363 Ga0501076_0005220
364 Ga0501077_0000181
365 Ga0501077_0117340
366 Ga0501248_005036
367 Ga0501079_0025997
368 Ga0501081_0017349
369 Ga0501035_0398822
370 Ga0501045_0004694
371 nmdc:mga0qj67_216034_c1
372 nmdc:mga06r32_2816_c1
373 nmdc:mga06r32_741481_c1
374 nmdc:mga0a205_18596_c1
375 nmdc:mga0a205_97585_c1
376 Ga0495619_0248016
377 Ga0501084_0039206
378 Ga0590074_006415
379 Ga0590075_018832
380 Ga0590077_007444
381 Ga0590077_020320
382 Ga0501082_0030606
383 Ga0501082_0264764
384 Ga0530510_0052223

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00075

RNase_H

RNase H

2

146

0.82

Structural Annotation

Top 5 Hits

ID Description Score Start End
3h08-assembly2.cif.gz_B crystal structure of the ribonuclease h1 from chlorobium tepidum 0.9307 3 154
3h08-assembly1.cif.gz_A crystal structure of the ribonuclease h1 from chlorobium tepidum 0.9276 4 154
3h08-assembly2.cif.gz_B crystal structure of the ribonuclease h1 from chlorobium tepidum 0.912 3 154
1wsj-assembly3.cif.gz_C crystal structure of e.coli rnase hi active site mutant (k87a/h124a) 0.903 1 159
3h08-assembly1.cif.gz_A crystal structure of the ribonuclease h1 from chlorobium tepidum 0.9022 4 154
ID Description Score Start End Superfamily
4ibnA01 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;Ribonuclease H-like superfamily/Ribonuclease H 0.9281 1 171 3.30.420.10
2zqbB00 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;Ribonuclease H-like superfamily/Ribonuclease H 0.8628 3 158 3.30.420.10
4ibnA01 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;Ribonuclease H-like superfamily/Ribonuclease H 0.8429 1 171 3.30.420.10
1jl2C00 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;Ribonuclease H-like superfamily/Ribonuclease H 0.8417 4 166 3.30.420.10
5kynA01 Mainly Beta;Sandwich;Immunoglobulin-like;beta-sandwich domain of Sec23/24 0.8285 23 51 2.60.40.1670
ID Description Score Start End GO Terms
AF-A0A2E5GYE8-F1-model_v4 ribonuclease H (EC 3.1.26.4) 0.9779 27 171 GO:0003676
GO:0004523
GO:0043137
AF-A0A838RBN3-F1-model_v4 ribonuclease H (EC 3.1.26.4) 0.9709 1 207 GO:0003676
GO:0004523
GO:0043137
AF-A0A7W1ADM6-F1-model_v4 ribonuclease H (EC 3.1.26.4) 0.9687 7 207 GO:0003676
GO:0004523
GO:0043137
AF-A0A838RBN3-F1-model_v4 ribonuclease H (EC 3.1.26.4) 0.9663 1 207 GO:0003676
GO:0004523
GO:0043137
AF-A0A7W0JZN8-F1-model_v4 RNase H type-1 domain-containing protein 0.9661 1 125 GO:0003676
GO:0004523

Map