F295181

General Info

Members Datasets Scaffolds Average Seq Length
192 142 384 240

Family's Representative Sequence

Representative Sequence 3300005364|Ga0070673_100351967|Ga0070673_1003519672
Length 282
Sequence MDSQPGVAGLSKGITSIAGASAGQTVTARTASAEYYGPLAARYHGTVTANLRVRIFADGADKRGILDLYKNPLIQGFTTNPTLMRQVGIGDYEAFAREILAEIPDRPFSLEVFSDEFDEMGRQARKLARLGPNVYVKIPITNTRGESSDHLVRALTHENIKLNVTALMTVDQVRTTTAALAGSPSAYISVFAGRVADAGVDPLPIMRESLAIMRSQPQLELIWASPREIFNLVQADQIGCHIITITHDLLKKLPSLGKDLTEFSLDTVKMFHRDAQAAGYKL

Samples

Sample ID Description Type Environment
1 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
2 2162886006 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v1 Metagenome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
5 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
6 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
7 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
8 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
9 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
10 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
11 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
12 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
13 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
14 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
15 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
16 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
17 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
18 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
19 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
20 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
21 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
22 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
23 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
24 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
25 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
26 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
27 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
28 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
29 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
30 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
31 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
32 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
33 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
34 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
35 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
36 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
37 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
38 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
39 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
40 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
41 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
42 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
43 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
44 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
45 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
46 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
47 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
48 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
49 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
50 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
51 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
52 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
53 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
54 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
55 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
56 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
57 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
58 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
80 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
82 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
83 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
84 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
85 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
86 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
87 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
88 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
89 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
90 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
91 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
92 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
93 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
94 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
95 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
96 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
97 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
98 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
99 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
100 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
101 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
102 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
103 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
104 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
105 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
106 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
107 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
108 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
109 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
110 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
111 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
112 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
113 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
114 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
115 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
116 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
117 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
118 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
119 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
120 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
121 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
122 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
123 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
124 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
125 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
126 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
127 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
128 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
129 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
130 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
131 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
132 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
133 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
134 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
135 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
136 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
137 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
138 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
139 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
140 3300053102 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 endosphere Metagenome Endosphere
141 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
142 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.56
Nodule 0
Rhizoplane 2.6
Rhizosphere 92.71
Stem 0
Stem Tuber 0
Unclassified 15.62

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070673_100351967 3300005364 Bacteria 1307
2 SwRhRL3b_contig_1474509 2162886006 Bacteria 2053
3 SwRhRL3b_contig_403887 2162886006 Bacteria 2121
4 Ga0070683_100068848 3300005329 Bacteria 3298
5 Ga0070690_100047577 3300005330 Bacteria 2729
6 Ga0070677_10005763 3300005333 Bacteria 4096
7 Ga0068869_100367981 3300005334 Bacteria 1175
8 Ga0068868_100360678 3300005338 Bacteria 1247
9 Ga0070689_100035029 3300005340 Bacteria 3833
10 Ga0070687_100358405 3300005343 Unclassified 943
11 Ga0070669_100041650 3300005353 Bacteria 3340
12 Ga0070673_100001818 3300005364 Bacteria 12732
13 Ga0070667_100055039 3300005367 Bacteria 3360
14 Ga0070667_100313849 3300005367 Bacteria 1413
15 Ga0070701_10004148 3300005438 Bacteria 5824
16 Ga0070705_100424378 3300005440 Bacteria 991
17 Ga0070700_100008331 3300005441 Bacteria 5644
18 Ga0070678_100198941 3300005456 Unclassified 1653
19 Ga0070662_100263521 3300005457 Bacteria 1389
20 Ga0070707_100002051 3300005468 Bacteria 19291
21 Ga0070707_100041649 3300005468 Bacteria 4397
22 Ga0070684_100178194 3300005535 Bacteria 1932
23 Ga0068853_100432852 3300005539 Bacteria 1235
24 Ga0070672_100010057 3300005543 Bacteria 6548
25 Ga0070695_100093294 3300005545 Bacteria 2014
26 Ga0070693_100288153 3300005547 Bacteria 1102
27 Ga0068855_100000992 3300005563 Bacteria 35309
28 Ga0070664_100050782 3300005564 Bacteria 3511
29 Ga0068854_100491001 3300005578 Unclassified 1032
30 Ga0068852_100000429 3300005616 Bacteria 27941
31 Ga0068864_100186119 3300005618 Bacteria 1901
32 Ga0068861_100734900 3300005719 Unclassified 920
33 Ga0068863_100267980 3300005841 Unclassified 1652
34 Ga0068863_100360737 3300005841 Bacteria 1417
35 Ga0068858_100052971 3300005842 Unclassified 3755
36 Ga0068860_100270299 3300005843 Bacteria 1659
37 Ga0068862_100082649 3300005844 Bacteria 2788
38 Ga0081455_10008099 3300005937 Bacteria 10975
39 Ga0081455_10035326 3300005937 Archaea 4469
40 Ga0081455_10087797 3300005937 Bacteria 2529
41 Ga0081538_10082487 3300005981 Bacteria 1704
42 Ga0070717_10085746 3300006028 Bacteria 2651
43 Ga0070712_100181879 3300006175 Bacteria 1639
44 Ga0097621_100585430 3300006237 Bacteria 1019
45 Ga0075428_100020854 3300006844 Bacteria 7256
46 Ga0075430_100014207 3300006846 Bacteria 6787
47 Ga0075430_100049821 3300006846 Bacteria 3534
48 Ga0075430_100054482 3300006846 Bacteria 3365
49 Ga0075430_100190711 3300006846 Bacteria 1703
50 Ga0075431_100053329 3300006847 Bacteria 4170
51 Ga0075431_100422908 3300006847 Unclassified 1331
52 Ga0075431_100578329 3300006847 Bacteria 1109
53 Ga0075433_10204794 3300006852 Unclassified 1754
54 Ga0075433_10258156 3300006852 Unclassified 1545
55 Ga0075429_100018641 3300006880 Bacteria 6010
56 Ga0075429_100198995 3300006880 Bacteria 1755
57 Ga0075429_100523051 3300006880 Bacteria 1040
58 Ga0097620_100722913 3300006931 Bacteria 1086
59 Ga0075435_100005119 3300007076 Bacteria 9112
60 Ga0105240_10136771 3300009093 Unclassified 2934
61 Ga0111539_11062300 3300009094 Bacteria 941
62 Ga0105245_10592910 3300009098 Bacteria 1134
63 Ga0105245_10975175 3300009098 Unclassified 891
64 Ga0114129_10026832 3300009147 Bacteria 8155
65 Ga0114129_10595963 3300009147 Unclassified 1432
66 Ga0105248_10125602 3300009177 Bacteria 2894
67 Ga0105248_10653806 3300009177 Bacteria 1186
68 Ga0105249_10530266 3300009553 Bacteria 1226
69 Ga0105239_10340007 3300010375 Bacteria 1694
70 Ga0157369_10116636 3300013105 Bacteria 2835
71 Ga0157372_10034603 3300013307 Bacteria 5555
72 Ga0157372_10281674 3300013307 Unclassified 1933
73 Ga0157375_10515373 3300013308 Bacteria 1359
74 Ga0163163_10081590 3300014325 Bacteria 3236
75 Ga0157376_11010442 3300014969 Bacteria 854
76 Ga0213875_10008280 3300021388 Bacteria 5332
77 Ga0207682_10019213 3300025893 Bacteria 2675
78 Ga0207688_10014735 3300025901 Bacteria 4243
79 Ga0207645_10036980 3300025907 Bacteria 3135
80 Ga0207663_10307922 3300025916 Bacteria 1186
81 Ga0207662_10003446 3300025918 Bacteria 8142
82 Ga0207662_10378281 3300025918 Unclassified 956
83 Ga0207652_10431698 3300025921 Bacteria 1188
84 Ga0207646_10037080 3300025922 Bacteria 4397
85 Ga0207681_10026063 3300025923 Bacteria 3768
86 Ga0207681_10647634 3300025923 Bacteria 876
87 Ga0207650_10011361 3300025925 Bacteria 6129
88 Ga0207644_10058678 3300025931 Bacteria 2782
89 Ga0207670_10040875 3300025936 Bacteria 3046
90 Ga0207670_10155248 3300025936 Viruses 1703
91 Ga0207691_10013999 3300025940 Bacteria 7652
92 Ga0207711_10081981 3300025941 Bacteria 2819
93 Ga0207689_10140613 3300025942 Bacteria 1988
94 Ga0207651_10008862 3300025960 Bacteria 5462
95 Ga0207677_10264598 3300026023 Unclassified 1403
96 Ga0207703_10046130 3300026035 Bacteria 3509
97 Ga0207639_10200232 3300026041 Bacteria 1712
98 Ga0207708_10002308 3300026075 Bacteria 14027
99 Ga0207676_10172703 3300026095 Bacteria 1885
100 Ga0207683_10064075 3300026121 Bacteria 3239
101 Ga0207683_10148074 3300026121 Bacteria 2118
102 Ga0207428_10048659 3300027907 Bacteria 3400
103 Ga0268266_10517903 3300028379 Unclassified 1140
104 Ga0265326_10001203 3300028558 Bacteria 9263
105 Ga0265319_1000388 3300028563 Bacteria 31872
106 Ga0265318_10000793 3300028577 Bacteria 20910
107 Ga0265322_10030783 3300028654 Bacteria 1532
108 Ga0265336_10000019 3300028666 Bacteria 218636
109 Ga0265338_10000272 3300028800 Bacteria 94567
110 Ga0265340_10000004 3300031247 Bacteria 218649
111 Ga0265339_10108426 3300031249 Bacteria 1439
112 Ga0265331_10003206 3300031250 Bacteria 10674
113 Ga0265327_10000150 3300031251 Bacteria 150039
114 Ga0265316_10012051 3300031344 Bacteria 7772
115 Ga0265316_10040178 3300031344 Unclassified 3752
116 Ga0373927_0050229 3300035695 Bacteria 2696
117 Ga0373947_0052267 3300035725 Bacteria 2461
118 Ga0373937_0161840 3300036401 Bacteria 2098
119 Ga0373925_0329436 3300037068 Bacteria 1237
120 Ga0395900_0057879 3300037418 Bacteria 3990
121 Ga0395898_0016025 3300037466 Bacteria 7676
122 Ga0436364_0512178 3300037853 Bacteria 4865
123 Ga0436364_1537225 3300037853 Bacteria 18254
124 Ga0395901_0043589 3300038443 Bacteria 4653
125 Ga0436362_1111817 3300039453 Bacteria 949
126 Ga0466969_0142313 3300044656 Bacteria 1108
127 Ga0453683_0041036 3300044673 Bacteria 2906
128 Ga0453683_0263684 3300044673 Bacteria 1099
129 Ga0453684_0020796 3300044712 Bacteria 9863
130 Ga0453684_0099814 3300044712 Bacteria 3554
131 Ga0453684_0163631 3300044712 Unclassified 2629
132 Ga0453684_0350156 3300044712 Bacteria 1666
133 Ga0466968_0034177 3300044735 Bacteria 2121
134 Ga0466960_0375871 3300044901 Unclassified 815
135 Ga0451576_0024920 3300045051 Bacteria 6455
136 Ga0451576_0345098 3300045051 Bacteria 1559
137 Ga0466967_0594696 3300045976 Bacteria 1092
138 Ga0495580_0000286 3300046472 Bacteria 41000
139 Ga0495580_0477925 3300046472 Bacteria 834
140 Ga0495582_0372382 3300046473 Unclassified 823
141 Ga0495594_0213014 3300046499 Bacteria 1102
142 Ga0495628_0127238 3300046516 Bacteria 1951
143 Ga0495628_0321282 3300046516 Bacteria 1142
144 Ga0495628_0483988 3300046516 Bacteria 895
145 Ga0495665_0223234 3300046531 Unclassified 974
146 Ga0495645_0000053 3300046543 Bacteria 85500
147 Ga0495645_0000560 3300046543 Bacteria 25580
148 Ga0495645_0045037 3300046543 Unclassified 3219
149 Ga0495645_0071100 3300046543 Bacteria 2510
150 Ga0495622_0120600 3300046557 Bacteria 1197
151 Ga0495667_0226572 3300046559 Unclassified 1192
152 Ga0495634_0311141 3300046642 Unclassified 950
153 Ga0495599_0051771 3300046678 Bacteria 2573
154 Ga0495623_0071523 3300046679 Bacteria 2158
155 Ga0495623_0073845 3300046679 Archaea 2120
156 Ga0495658_0055182 3300046683 Unclassified 2263
157 Ga0495613_0387310 3300046689 Unclassified 955
158 Ga0495581_0040310 3300047315 Unclassified 2703
159 Ga0495604_0032760 3300047317 Bacteria 4117
160 Ga0495674_0014671 3300047319 Bacteria 7331
161 Ga0495674_0093542 3300047319 Bacteria 2565
162 Ga0495676_0166001 3300047321 Bacteria 1558
163 Ga0495675_0038400 3300047444 Bacteria 3049
164 Ga0495675_0259153 3300047444 Bacteria 1042
165 Ga0495684_0011001 3300047471 Bacteria 6997
166 Ga0495602_0053430 3300048088 Bacteria 3578
167 Ga0495602_0292966 3300048088 Bacteria 1194
168 Ga0496104_0213192 3300048907 Unclassified 1843
169 Ga0496107_0217887 3300048910 Bacteria 1420
170 Ga0496114_0049294 3300048917 Bacteria 3504
171 Ga0496115_0021181 3300048918 Bacteria 5019
172 Ga0496115_0231879 3300048918 Bacteria 1522
173 Ga0496121_0001336 3300048924 Bacteria 42234
174 Ga0496121_0105623 3300048924 Bacteria 2161
175 Ga0496126_0018580 3300048929 Bacteria 6882
176 nmdc:mga05p37_1364612_c1 3300050507 Bacteria 717
177 nmdc:mga05p37_20349_c1 3300050507 Bacteria 8029
178 nmdc:mga09592_16567_c1 3300050508 Bacteria 6031
179 nmdc:mga09592_67755_c1 3300050508 Bacteria 3028
180 nmdc:mga09592_79086_c1 3300050508 Bacteria 2799
181 nmdc:mga0qj67_2193_c1 3300050509 Bacteria 13874
182 nmdc:mga0qj67_87798_c1 3300050509 Bacteria 2496
183 nmdc:mga0qj67_9295_c1 3300050509 Bacteria 7311
184 nmdc:mga06r32_298073_c1 3300050510 Bacteria 1598
185 nmdc:mga06r32_4796_c1 3300050510 Bacteria 12166
186 nmdc:mga06r32_482430_c1 3300050510 Unclassified 1218
187 nmdc:mga0rr50_9213_c1 3300050513 Bacteria 6192
188 nmdc:mga0a205_282240_c1 3300050515 Unclassified 1536
189 nmdc:mga0a205_684621_c1 3300050515 Bacteria 876
190 Ga0500554_010909 3300053102 Bacteria 2233
191 Ga0500604_0067643 3300053151 Bacteria 1134
192 Ga0500637_0038067 3300053178 Bacteria 2708
193 Ga0070673_100351967
194 SwRhRL3b_contig_1474509
195 SwRhRL3b_contig_403887
196 Ga0070683_100068848
197 Ga0070690_100047577
198 Ga0070677_10005763
199 Ga0068869_100367981
200 Ga0068868_100360678
201 Ga0070689_100035029
202 Ga0070687_100358405
203 Ga0070669_100041650
204 Ga0070673_100001818
205 Ga0070667_100055039
206 Ga0070667_100313849
207 Ga0070701_10004148
208 Ga0070705_100424378
209 Ga0070700_100008331
210 Ga0070678_100198941
211 Ga0070662_100263521
212 Ga0070707_100002051
213 Ga0070707_100041649
214 Ga0070684_100178194
215 Ga0068853_100432852
216 Ga0070672_100010057
217 Ga0070695_100093294
218 Ga0070693_100288153
219 Ga0068855_100000992
220 Ga0070664_100050782
221 Ga0068854_100491001
222 Ga0068852_100000429
223 Ga0068864_100186119
224 Ga0068861_100734900
225 Ga0068863_100267980
226 Ga0068863_100360737
227 Ga0068858_100052971
228 Ga0068860_100270299
229 Ga0068862_100082649
230 Ga0081455_10008099
231 Ga0081455_10035326
232 Ga0081455_10087797
233 Ga0081538_10082487
234 Ga0070717_10085746
235 Ga0070712_100181879
236 Ga0097621_100585430
237 Ga0075428_100020854
238 Ga0075430_100014207
239 Ga0075430_100049821
240 Ga0075430_100054482
241 Ga0075430_100190711
242 Ga0075431_100053329
243 Ga0075431_100422908
244 Ga0075431_100578329
245 Ga0075433_10204794
246 Ga0075433_10258156
247 Ga0075429_100018641
248 Ga0075429_100198995
249 Ga0075429_100523051
250 Ga0097620_100722913
251 Ga0075435_100005119
252 Ga0105240_10136771
253 Ga0111539_11062300
254 Ga0105245_10592910
255 Ga0105245_10975175
256 Ga0114129_10026832
257 Ga0114129_10595963
258 Ga0105248_10125602
259 Ga0105248_10653806
260 Ga0105249_10530266
261 Ga0105239_10340007
262 Ga0157369_10116636
263 Ga0157372_10034603
264 Ga0157372_10281674
265 Ga0157375_10515373
266 Ga0163163_10081590
267 Ga0157376_11010442
268 Ga0213875_10008280
269 Ga0207682_10019213
270 Ga0207688_10014735
271 Ga0207645_10036980
272 Ga0207663_10307922
273 Ga0207662_10003446
274 Ga0207662_10378281
275 Ga0207652_10431698
276 Ga0207646_10037080
277 Ga0207681_10026063
278 Ga0207681_10647634
279 Ga0207650_10011361
280 Ga0207644_10058678
281 Ga0207670_10040875
282 Ga0207670_10155248
283 Ga0207691_10013999
284 Ga0207711_10081981
285 Ga0207689_10140613
286 Ga0207651_10008862
287 Ga0207677_10264598
288 Ga0207703_10046130
289 Ga0207639_10200232
290 Ga0207708_10002308
291 Ga0207676_10172703
292 Ga0207683_10064075
293 Ga0207683_10148074
294 Ga0207428_10048659
295 Ga0268266_10517903
296 Ga0265326_10001203
297 Ga0265319_1000388
298 Ga0265318_10000793
299 Ga0265322_10030783
300 Ga0265336_10000019
301 Ga0265338_10000272
302 Ga0265340_10000004
303 Ga0265339_10108426
304 Ga0265331_10003206
305 Ga0265327_10000150
306 Ga0265316_10012051
307 Ga0265316_10040178
308 Ga0373927_0050229
309 Ga0373947_0052267
310 Ga0373937_0161840
311 Ga0373925_0329436
312 Ga0395900_0057879
313 Ga0395898_0016025
314 Ga0436364_0512178
315 Ga0436364_1537225
316 Ga0395901_0043589
317 Ga0436362_1111817
318 Ga0466969_0142313
319 Ga0453683_0041036
320 Ga0453683_0263684
321 Ga0453684_0020796
322 Ga0453684_0099814
323 Ga0453684_0163631
324 Ga0453684_0350156
325 Ga0466968_0034177
326 Ga0466960_0375871
327 Ga0451576_0024920
328 Ga0451576_0345098
329 Ga0466967_0594696
330 Ga0495580_0000286
331 Ga0495580_0477925
332 Ga0495582_0372382
333 Ga0495594_0213014
334 Ga0495628_0127238
335 Ga0495628_0321282
336 Ga0495628_0483988
337 Ga0495665_0223234
338 Ga0495645_0000053
339 Ga0495645_0000560
340 Ga0495645_0045037
341 Ga0495645_0071100
342 Ga0495622_0120600
343 Ga0495667_0226572
344 Ga0495634_0311141
345 Ga0495599_0051771
346 Ga0495623_0071523
347 Ga0495623_0073845
348 Ga0495658_0055182
349 Ga0495613_0387310
350 Ga0495581_0040310
351 Ga0495604_0032760
352 Ga0495674_0014671
353 Ga0495674_0093542
354 Ga0495676_0166001
355 Ga0495675_0038400
356 Ga0495675_0259153
357 Ga0495684_0011001
358 Ga0495602_0053430
359 Ga0495602_0292966
360 Ga0496104_0213192
361 Ga0496107_0217887
362 Ga0496114_0049294
363 Ga0496115_0021181
364 Ga0496115_0231879
365 Ga0496121_0001336
366 Ga0496121_0105623
367 Ga0496126_0018580
368 nmdc:mga05p37_1364612_c1
369 nmdc:mga05p37_20349_c1
370 nmdc:mga09592_16567_c1
371 nmdc:mga09592_67755_c1
372 nmdc:mga09592_79086_c1
373 nmdc:mga0qj67_2193_c1
374 nmdc:mga0qj67_87798_c1
375 nmdc:mga0qj67_9295_c1
376 nmdc:mga06r32_298073_c1
377 nmdc:mga06r32_4796_c1
378 nmdc:mga06r32_482430_c1
379 nmdc:mga0rr50_9213_c1
380 nmdc:mga0a205_282240_c1
381 nmdc:mga0a205_684621_c1
382 Ga0500554_010909
383 Ga0500604_0067643
384 Ga0500637_0038067

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00923

TAL_FSA

Transaldolase/Fructose-6-phosphate aldolase

55

282

0.91

Structural Annotation

Top 5 Hits

ID Description Score Start End
1vpx-assembly1.cif.gz_H crystal structure of transaldolase (ec 2.2.1.2) (tm0295) from thermotoga maritima at 2.40 a resolution 0.8878 11 225
1vpx-assembly2.cif.gz_N crystal structure of transaldolase (ec 2.2.1.2) (tm0295) from thermotoga maritima at 2.40 a resolution 0.8828 11 226
1vpx-assembly2.cif.gz_M crystal structure of transaldolase (ec 2.2.1.2) (tm0295) from thermotoga maritima at 2.40 a resolution 0.8813 11 224
1vpx-assembly2.cif.gz_L crystal structure of transaldolase (ec 2.2.1.2) (tm0295) from thermotoga maritima at 2.40 a resolution 0.8803 11 226
3r8r-assembly2.cif.gz_M transaldolase from bacillus subtilis 0.88 13 232
ID Description Score Start End Superfamily
af_Q2FXE8_2_234_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9709 9 238 3.20.20.70
af_Q2FXE8_2_234_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9547 9 238 3.20.20.70
3r8rB00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.8689 13 234 3.20.20.70
3r8rB00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.8533 13 234 3.20.20.70
1l6wA00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.8155 11 233 3.20.20.70
ID Description Score Start End GO Terms
AF-A0A382YD26-F1-model_v4 Transaldolase 0.9936 11 190 GO:0005975
AF-A0A383ER18-F1-model_v4 Transaldolase 0.9923 10 138 GO:0005975
AF-A0A383AHD2-F1-model_v4 Transaldolase 0.991 21 118 GO:0005975
AF-A0A2V5TS11-F1-model_v4 Transaldolase (EC 2.2.1.2) 0.9888 6 127 GO:0004801
GO:0005975
AF-A0A3D3GG24-F1-model_v4 Transaldolase 0.9841 9 240 GO:0005975

Map