F290178

General Info

Members Datasets Scaffolds Average Seq Length
188 162 186 290

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2904434214|2904439086
Length 349
Sequence YKAASSALLAAALFGAATPVAKVLLGSLSPFMVAGLFYVGSGIGLAAGIVIQRCRATAPERLDGSRIEFEDVPWLVGAIAAGGVAGPALLMLGLNTVSASTSSLLLNFEAVFTAMIAWIVFRENADLQIVLGMVAIVAGGVALSWQSGGADVSSGAWLVVGACLAWAIDNNLTRKVSTNNAVVIACAKGLAAGPVNLGIAFSMGAHLPNAETMTLAMLTGFAGYGISLVLFVVALRNLGTGRTSAYFSVGPLFGVALSLYLWPQMPSPLFWVAAALMGLGIWLHIRERHAHQHTHEVVTHNHRHRHDAHHQHKHDFEWDGHEPHAHLHQHEPITHMHAHFPDVHHRHMH

Samples

Sample ID Description Type Environment
1 2891088606 Methylosinus sp. 3S-1 Isolate Rhizosphere
2 2904434214 Robbsia andropogonis 1567 Isolate Rhizosphere
3 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
4 3300003751 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 Metagenome Endosphere
5 3300003752 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 Metagenome Endosphere
6 3300003756 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 Metagenome Endosphere
7 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
8 3300003841 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 Metagenome Endosphere
9 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
10 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
11 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
12 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
13 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
14 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
15 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
16 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
17 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
18 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
19 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
20 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
21 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
22 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
23 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
24 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
25 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
26 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
27 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
28 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
29 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
30 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
31 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
32 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
33 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
34 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
35 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
36 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
37 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
38 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
39 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
40 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
41 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
42 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
43 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
44 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
45 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
46 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
47 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
48 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
49 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
50 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
51 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
52 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
53 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
54 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
55 3300025224 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
56 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
57 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
58 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
59 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
60 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
61 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
62 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300027364 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co AM (SPAdes) (version 2) Metagenome Rhizosphere
76 3300027526 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 AM (SPAdes) (version 2) Metagenome Rhizosphere
77 3300027543 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 AM (SPAdes) (version 2) Metagenome Rhizosphere
78 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
80 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
81 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
82 3300035092 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_11 Metagenome Rhizosphere
83 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
84 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
85 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
86 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
87 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
88 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
89 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
90 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
91 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
92 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
93 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
94 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
95 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
96 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
97 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
98 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
99 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
100 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
101 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
102 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
103 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
104 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
105 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
106 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
107 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
108 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
109 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
110 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
111 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
112 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
113 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
114 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
115 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
116 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
117 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
118 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
119 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
120 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
121 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
122 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
123 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
124 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
125 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
126 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
127 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
128 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
129 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
130 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
131 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
132 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
133 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
134 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
135 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
136 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
137 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
138 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
139 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
140 3300049758 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D15_A_3_drought Metagenome Rhizosphere
141 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
142 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
143 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
144 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
145 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
146 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
147 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
148 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
149 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
150 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
151 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
152 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
153 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
154 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
155 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
156 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
157 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
158 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
159 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
160 3300053731 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 endosphere Metagenome Endosphere
161 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
162 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.94
Metatranscriptomes 0
Isolates 1.06

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 12.23
Nodule 0
Rhizoplane 4.79
Rhizosphere 78.19
Stem 0
Stem Tuber 0
Unclassified 4.79

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH1_10051707 3300003316 Bacteria 6215
2 Ga0055538_1000002 3300003751 Bacteria 999437
3 Ga0055539_1000002 3300003752 Bacteria 999437
4 Ga0055533_1000004 3300003756 Bacteria 999437
5 Ga0055525_1000002 3300003759 Bacteria 999437
6 Ga0055541_1000002 3300003841 Bacteria 896405
7 Ga0070658_10052307 3300005327 Bacteria 3312
8 Ga0070658_10081291 3300005327 Bacteria 2661
9 Ga0070658_10087722 3300005327 Bacteria 2561
10 Ga0070683_100153545 3300005329 Bacteria 2183
11 Ga0070680_100006287 3300005336 Bacteria 9018
12 Ga0070680_100208135 3300005336 Bacteria 1650
13 Ga0070660_100045329 3300005339 Bacteria 3365
14 Ga0070660_100210821 3300005339 Bacteria 1577
15 Ga0070671_100310514 3300005355 Bacteria 1343
16 Ga0070659_100003067 3300005366 Bacteria 11861
17 Ga0070659_100064306 3300005366 Bacteria 2903
18 Ga0070713_100085161 3300005436 Bacteria 2707
19 Ga0070711_100044395 3300005439 Bacteria 3017
20 Ga0070700_100276901 3300005441 Bacteria 1215
21 Ga0070708_100084994 3300005445 Bacteria 2871
22 Ga0070681_10013044 3300005458 Bacteria 8252
23 Ga0070706_100039531 3300005467 Bacteria 4355
24 Ga0070706_100045011 3300005467 Bacteria 4076
25 Ga0070707_100015941 3300005468 Bacteria 7054
26 Ga0070707_100138600 3300005468 Bacteria 2367
27 Ga0070679_100010314 3300005530 Bacteria 8857
28 Ga0070697_100003430 3300005536 Bacteria 12189
29 Ga0068853_100016433 3300005539 Bacteria 6090
30 Ga0070695_100142834 3300005545 Bacteria 1662
31 Ga0070704_100067747 3300005549 Bacteria 2579
32 Ga0070704_100127612 3300005549 Bacteria 1965
33 Ga0070702_100077116 3300005615 Bacteria 1986
34 Ga0068852_100065297 3300005616 Bacteria 3175
35 Ga0068852_100293819 3300005616 Bacteria 1571
36 Ga0068852_100401789 3300005616 Bacteria 1348
37 Ga0068863_100043084 3300005841 Bacteria 4285
38 Ga0068858_100394998 3300005842 Bacteria 1328
39 Ga0068860_100095049 3300005843 Bacteria 2840
40 Ga0081540_1018714 3300005983 Bacteria 4238
41 Ga0070712_100017319 3300006175 Bacteria 4663
42 Ga0075428_100118881 3300006844 Bacteria 2878
43 Ga0075430_100035940 3300006846 Bacteria 4201
44 Ga0075430_100095520 3300006846 Bacteria 2484
45 Ga0075431_100083656 3300006847 Bacteria 3295
46 Ga0075434_100000277 3300006871 Bacteria 36475
47 Ga0075436_100076683 3300006914 Bacteria 2315
48 Ga0075435_100003208 3300007076 Bacteria 11072
49 Ga0099795_10001324 3300007788 Bacteria 5287
50 Ga0105251_10000730 3300009011 Bacteria 30157
51 Ga0105240_10034804 3300009093 Bacteria 6495
52 Ga0105240_10037276 3300009093 Bacteria 6250
53 Ga0111539_10019504 3300009094 Bacteria 8367
54 Ga0114129_10016389 3300009147 Bacteria 10548
55 Ga0105243_10113665 3300009148 Bacteria 2271
56 Ga0105237_10279333 3300009545 Bacteria 1672
57 Ga0105238_10022052 3300009551 Bacteria 6491
58 Ga0105238_10099280 3300009551 Bacteria 2894
59 Ga0099796_10003517 3300010159 Bacteria 3649
60 Ga0157370_10011507 3300013104 Bacteria 9245
61 Ga0157369_10003746 3300013105 Bacteria 18062
62 Ga0163162_10293657 3300013306 Bacteria 1757
63 Ga0157372_10593557 3300013307 Bacteria 1291
64 Ga0157376_10477570 3300014969 Bacteria 1221
65 Ga0213872_10004680 3300021361 Bacteria 7188
66 Ga0209784_100002 3300025224 Bacteria 1753105
67 Ga0209566_100003 3300025225 Bacteria 1753105
68 Ga0209674_100004 3300025226 Bacteria 1753105
69 Ga0209563_100006 3300025230 Bacteria 1753105
70 Ga0209677_100003 3300025253 Bacteria 1753105
71 Ga0207426_1003394 3300025302 Bacteria 8718
72 Ga0209257_1018895 3300025304 Bacteria 2625
73 Ga0207705_10109231 3300025909 Bacteria 2042
74 Ga0207705_10130577 3300025909 Bacteria 1870
75 Ga0207684_10000942 3300025910 Bacteria 32844
76 Ga0207707_10006159 3300025912 Bacteria 10481
77 Ga0207693_10026799 3300025915 Bacteria 4559
78 Ga0207663_10111650 3300025916 Bacteria 1856
79 Ga0207657_10003191 3300025919 Bacteria 17542
80 Ga0207657_10230065 3300025919 Bacteria 1483
81 Ga0207646_10005519 3300025922 Bacteria 13295
82 Ga0207646_10152885 3300025922 Bacteria 2081
83 Ga0207694_10073396 3300025924 Bacteria 2677
84 Ga0207700_10049550 3300025928 Bacteria 3125
85 Ga0207665_10028742 3300025939 Bacteria 3675
86 Ga0207708_10137062 3300026075 Bacteria 1917
87 Ga0207641_10023917 3300026088 Bacteria 5036
88 Ga0207674_10459574 3300026116 Bacteria 1230
89 Ga0209967_1007037 3300027364 Bacteria 1536
90 Ga0209968_1005023 3300027526 Bacteria 1987
91 Ga0209999_1003656 3300027543 Bacteria 2752
92 Ga0268265_10260832 3300028380 Unclassified 1541
93 Ga0307508_10223831 3300031616 Bacteria 1481
94 Ga0307516_10000679 3300031730 Bacteria 46117
95 Ga0307406_10033511 3300031901 Bacteria 3145
96 Ga0373952_0000104 3300035092 Bacteria 11297
97 Ga0373931_0168812 3300035691 Bacteria 1288
98 Ga0373947_0020598 3300035725 Bacteria 3809
99 Ga0373937_0231253 3300036401 Bacteria 1741
100 Ga0436361_0049009 3300039447 Bacteria 6085
101 Ga0436361_0080010 3300039447 Bacteria 24018
102 Ga0436361_1037642 3300039447 Bacteria 2889
103 Ga0451577_0028148 3300042876 Bacteria 5084
104 Ga0466969_0011061 3300044656 Bacteria 4778
105 Ga0453683_0193625 3300044673 Bacteria 1290
106 Ga0466965_0025062 3300044683 Bacteria 2886
107 Ga0466966_0012929 3300044684 Bacteria 5528
108 Ga0466961_0113855 3300044693 Bacteria 1700
109 Ga0453684_0030641 3300044712 Bacteria 7591
110 Ga0453684_0206741 3300044712 Bacteria 2284
111 Ga0453684_0259090 3300044712 Bacteria 1993
112 Ga0466970_0014439 3300044765 Bacteria 4056
113 Ga0466957_0025821 3300044842 Bacteria 3482
114 Ga0466959_0009742 3300045049 Bacteria 6843
115 Ga0451576_0128598 3300045051 Bacteria 2640
116 Ga0451576_0325279 3300045051 Bacteria 1609
117 Ga0466958_0002064 3300045836 Bacteria 9933
118 Ga0495592_0175203 3300046454 Bacteria 1465
119 Ga0495590_0001006 3300046457 Bacteria 12443
120 Ga0495641_0004306 3300046461 Bacteria 10134
121 Ga0495639_0019688 3300046475 Bacteria 2945
122 Ga0495662_0113255 3300046476 Bacteria 1330
123 Ga0495664_0076307 3300046477 Bacteria 2006
124 Ga0495584_0015971 3300046491 Bacteria 3831
125 Ga0495620_0048829 3300046515 Bacteria 1814
126 Ga0495586_0001835 3300046535 Bacteria 11584
127 Ga0495597_0004701 3300046542 Bacteria 7404
128 Ga0495634_0066367 3300046642 Bacteria 2389
129 Ga0495658_0006547 3300046683 Bacteria 5723
130 Ga0495613_0017916 3300046689 Bacteria 5280
131 Ga0495649_0083086 3300046694 Bacteria 1711
132 Ga0495683_0001006 3300047323 Bacteria 19647
133 Ga0495686_0030310 3300047472 Bacteria 3514
134 Ga0496100_0007055 3300048903 Bacteria 6164
135 Ga0496103_0006300 3300048906 Bacteria 7091
136 Ga0496105_0032290 3300048908 Bacteria 4295
137 Ga0496105_0268243 3300048908 Bacteria 1379
138 Ga0496106_0093918 3300048909 Bacteria 2318
139 Ga0496107_0034248 3300048910 Bacteria 3637
140 Ga0496110_0004366 3300048913 Bacteria 10947
141 Ga0496112_0052657 3300048915 Bacteria 3995
142 Ga0496115_0056539 3300048918 Bacteria 3153
143 Ga0496116_0006409 3300048919 Bacteria 10678
144 Ga0496117_0010954 3300048920 Bacteria 8172
145 Ga0496121_0002057 3300048924 Bacteria 31838
146 Ga0496122_0012331 3300048925 Bacteria 8529
147 Ga0496123_0015579 3300048926 Bacteria 6225
148 Ga0496124_0018952 3300048927 Bacteria 6424
149 Ga0501036_0150291 3300049572 Bacteria 1964
150 Ga0501040_0036019 3300049576 Bacteria 3357
151 Ga0501041_0074043 3300049577 Bacteria 2093
152 Ga0501046_0146817 3300049580 Bacteria 1781
153 Ga0501048_0061618 3300049582 Bacteria 2656
154 Ga0501070_0398412 3300049586 Bacteria 1113
155 Ga0501072_0105731 3300049588 Bacteria 2238
156 Ga0501076_0020913 3300049592 Bacteria 5012
157 Ga0501077_0065088 3300049593 Bacteria 2312
158 Ga0501077_0086659 3300049593 Bacteria 1985
159 Ga0501077_0251590 3300049593 Bacteria 1124
160 Ga0501079_0115735 3300049741 Bacteria 2084
161 Ga0501081_0262031 3300049743 Bacteria 1263
162 Ga0501241_002142 3300049758 Bacteria 3855
163 nmdc:mga05p37_74414_c1 3300050507 Bacteria 4181
164 nmdc:mga0qj67_87863_c1 3300050509 Bacteria 2495
165 nmdc:mga06r32_46850_c1 3300050510 Bacteria 4126
166 nmdc:mga08y16_31780_c1 3300050511 Bacteria 5551
167 nmdc:mga0n895_3616_c1 3300050512 Bacteria 12498
168 nmdc:mga0rr50_4401_c1 3300050513 Bacteria 8279
169 nmdc:mga0a205_97333_c1 3300050515 Bacteria 2841
170 Ga0495601_0000979 3300053077 Bacteria 15612
171 Ga0495601_0052620 3300053077 Bacteria 2572
172 Ga0495619_0095699 3300053085 Unclassified 2015
173 Ga0500583_0125373 3300053092 Bacteria 1272
174 Ga0500651_0047921 3300053093 Bacteria 2686
175 Ga0500566_0038883 3300053094 Bacteria 2752
176 Ga0500641_0001703 3300053096 Bacteria 7822
177 Ga0500555_006681 3300053103 Bacteria 3277
178 Ga0500594_0032617 3300053118 Bacteria 1380
179 Ga0500595_003341 3300053119 Bacteria 7535
180 Ga0500642_0000588 3300053130 Bacteria 10896
181 Ga0500658_0020331 3300053134 Bacteria 2505
182 Ga0500577_0003483 3300053142 Bacteria 4088
183 Ga0500609_002590 3300053731 Bacteria 2576
184 Ga0501084_0053878 3300054114 Bacteria 3365
185 Ga0501084_0146056 3300054114 Bacteria 1992
186 Ga0466962_0006514 3300061719 Bacteria 5604

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300026116 Ga0207674_10459574 Ga0207674_104595742 211
2 3300013307 Ga0157372_10593557 Ga0157372_105935572 244
3 3300053130 Ga0500642_0000588 Ga0500642_0000588_8556_9581 244
4 3300005336 Ga0070680_100006287 Ga0070680_1000062879 247
5 3300005458 Ga0070681_10013044 Ga0070681_100130448 247
6 3300005530 Ga0070679_100010314 Ga0070679_1000103144 247
7 3300009093 Ga0105240_10034804 Ga0105240_100348047 247
8 3300013104 Ga0157370_10011507 Ga0157370_100115079 247
9 3300025912 Ga0207707_10006159 Ga0207707_100061594 247
10 3300044712 Ga0453684_0206741 Ga0453684_0206741_1106_2068 250
11 3300005468 Ga0070707_100015941 Ga0070707_1000159412 251
12 3300006846 Ga0075430_100095520 Ga0075430_1000955202 252
13 3300050509 nmdc:mga0qj67_87863_c1 nmdc:mga0qj67_87863_c1_816_1871 252
14 3300005336 Ga0070680_100208135 Ga0070680_1002081352 254
15 3300025304 Ga0209257_1018895 Ga0209257_10188954 254
16 3300053093 Ga0500651_0047921 Ga0500651_0047921_1651_2676 255
17 3300053142 Ga0500577_0003483 Ga0500577_0003483_2615_3640 255
18 3300035691 Ga0373931_0168812 Ga0373931_0168812_166_1239 256
19 3300006844 Ga0075428_100118881 Ga0075428_1001188813 258
20 3300006846 Ga0075430_100035940 Ga0075430_1000359402 258
21 3300006847 Ga0075431_100083656 Ga0075431_1000836562 258
22 3300009147 Ga0114129_10016389 Ga0114129_100163899 258
23 3300049586 Ga0501070_0398412 Ga0501070_0398412_32_1072 258
24 3300050507 nmdc:mga05p37_74414_c1 nmdc:mga05p37_74414_c1_847_1896 258
25 3300050510 nmdc:mga06r32_46850_c1 nmdc:mga06r32_46850_c1_733_1782 258
26 3300050515 nmdc:mga0a205_97333_c1 nmdc:mga0a205_97333_c1_62_1111 258
27 3300027364 Ga0209967_1007037 Ga0209967_10070371 259
28 3300027526 Ga0209968_1005023 Ga0209968_10050232 259
29 3300027543 Ga0209999_1003656 Ga0209999_10036563 259
30 3300044673 Ga0453683_0193625 Ga0453683_0193625_252_1268 260
31 3300049572 Ga0501036_0150291 Ga0501036_0150291_139_1167 260
32 3300049576 Ga0501040_0036019 Ga0501040_0036019_1257_2285 260
33 3300049577 Ga0501041_0074043 Ga0501041_0074043_186_1214 260
34 3300049580 Ga0501046_0146817 Ga0501046_0146817_563_1591 260
35 3300049582 Ga0501048_0061618 Ga0501048_0061618_1226_2254 260
36 3300049588 Ga0501072_0105731 Ga0501072_0105731_1026_2054 260
37 3300049592 Ga0501076_0020913 Ga0501076_0020913_2610_3638 260
38 3300049593 Ga0501077_0086659 Ga0501077_0086659_630_1658 260
39 3300054114 Ga0501084_0146056 Ga0501084_0146056_394_1422 260
40 3300005615 Ga0070702_100077116 Ga0070702_1000771162 261
41 3300045051 Ga0451576_0325279 Ga0451576_0325279_148_1167 261
42 3300009094 Ga0111539_10019504 Ga0111539_100195042 262
43 3300050511 nmdc:mga08y16_31780_c1 nmdc:mga08y16_31780_c1_2444_3463 262
44 3300009545 Ga0105237_10279333 Ga0105237_102793332 264
45 3300053118 Ga0500594_0032617 Ga0500594_0032617_39_1064 264
46 3300005327 Ga0070658_10087722 Ga0070658_100877223 265
47 3300005329 Ga0070683_100153545 Ga0070683_1001535452 265
48 3300005339 Ga0070660_100210821 Ga0070660_1002108212 265
49 3300005366 Ga0070659_100064306 Ga0070659_1000643062 265
50 3300005539 Ga0068853_100016433 Ga0068853_1000164335 265
51 3300009093 Ga0105240_10037276 Ga0105240_100372765 265
52 3300009551 Ga0105238_10022052 Ga0105238_100220524 265
53 3300013105 Ga0157369_10003746 Ga0157369_1000374615 265
54 3300025909 Ga0207705_10130577 Ga0207705_101305772 265
55 3300025919 Ga0207657_10230065 Ga0207657_102300652 265
56 3300025924 Ga0207694_10073396 Ga0207694_100733962 265
57 3300031616 Ga0307508_10223831 Ga0307508_102238312 265
58 3300036401 Ga0373937_0231253 Ga0373937_0231253_354_1379 265
59 3300048908 Ga0496105_0268243 Ga0496105_0268243_107_1132 265
60 3300053092 Ga0500583_0125373 Ga0500583_0125373_96_1121 265
61 3300053094 Ga0500566_0038883 Ga0500566_0038883_1068_2093 265
62 3300053103 Ga0500555_006681 Ga0500555_006681_651_1676 265
63 3300053119 Ga0500595_003341 Ga0500595_003341_2263_3288 265
64 3300053134 Ga0500658_0020331 Ga0500658_0020331_403_1428 265
65 3300053731 Ga0500609_002590 Ga0500609_002590_87_1112 265
66 3300005545 Ga0070695_100142834 Ga0070695_1001428341 266
67 3300047472 Ga0495686_0030310 Ga0495686_0030310_1698_2741 266
68 3300053096 Ga0500641_0001703 Ga0500641_0001703_3947_4990 266
69 3300039447 Ga0436361_1037642 Ga0436361_1037642_169_1221 268
70 3300003751 Ga0055538_1000002 Ga0055538_1000002174 269
71 3300003752 Ga0055539_1000002 Ga0055539_1000002174 269
72 3300003756 Ga0055533_1000004 Ga0055533_1000004174 269
73 3300003759 Ga0055525_1000002 Ga0055525_1000002174 269
74 3300003841 Ga0055541_1000002 Ga0055541_1000002667 269
75 3300005441 Ga0070700_100276901 Ga0070700_1002769012 269
76 3300006871 Ga0075434_100000277 Ga0075434_10000027730 269
77 3300006914 Ga0075436_100076683 Ga0075436_1000766833 269
78 3300007076 Ga0075435_100003208 Ga0075435_1000032083 269
79 3300021361 Ga0213872_10004680 Ga0213872_100046805 269
80 3300025224 Ga0209784_100002 Ga0209784_100002408 269
81 3300025225 Ga0209566_100003 Ga0209566_100003408 269
82 3300025226 Ga0209674_100004 Ga0209674_100004408 269
83 3300025230 Ga0209563_100006 Ga0209563_100006408 269
84 3300025253 Ga0209677_100003 Ga0209677_100003408 269
85 3300026075 Ga0207708_10137062 Ga0207708_101370622 269
86 3300035092 Ga0373952_0000104 Ga0373952_0000104_9880_10929 269
87 3300039447 Ga0436361_0080010 Ga0436361_0080010_4016_5104 269
88 3300044712 Ga0453684_0030641 Ga0453684_0030641_5123_6172 269
89 3300050512 nmdc:mga0n895_3616_c1 nmdc:mga0n895_3616_c1_8066_9109 269
90 3300050513 nmdc:mga0rr50_4401_c1 nmdc:mga0rr50_4401_c1_1076_2119 269
91 iso_pu_bacteria 2891088606 2891089198 269
92 3300005327 Ga0070658_10081291 Ga0070658_100812913 270
93 3300005436 Ga0070713_100085161 Ga0070713_1000851612 270
94 3300005616 Ga0068852_100065297 Ga0068852_1000652973 270
95 3300005983 Ga0081540_1018714 Ga0081540_10187143 270
96 3300014969 Ga0157376_10477570 Ga0157376_104775701 270
97 3300025909 Ga0207705_10109231 Ga0207705_101092312 270
98 3300025928 Ga0207700_10049550 Ga0207700_100495503 270
99 3300025939 Ga0207665_10028742 Ga0207665_100287423 270
100 3300028380 Ga0268265_10260832 Ga0268265_102608322 270
101 3300048908 Ga0496105_0032290 Ga0496105_0032290_73_1119 270
102 3300048918 Ga0496115_0056539 Ga0496115_0056539_742_1788 270
103 3300005339 Ga0070660_100045329 Ga0070660_1000453293 271
104 3300005366 Ga0070659_100003067 Ga0070659_1000030673 271
105 3300005616 Ga0068852_100293819 Ga0068852_1002938192 271
106 3300025919 Ga0207657_10003191 Ga0207657_100031918 271
107 3300046461 Ga0495641_0004306 Ga0495641_0004306_3850_4905 271
108 3300046475 Ga0495639_0019688 Ga0495639_0019688_1758_2813 271
109 3300046476 Ga0495662_0113255 Ga0495662_0113255_188_1243 271
110 3300046535 Ga0495586_0001835 Ga0495586_0001835_1737_2792 271
111 3300046642 Ga0495634_0066367 Ga0495634_0066367_829_1884 271
112 3300046683 Ga0495658_0006547 Ga0495658_0006547_1365_2420 271
113 3300046689 Ga0495613_0017916 Ga0495613_0017916_3833_4888 271
114 3300005327 Ga0070658_10052307 Ga0070658_100523072 272
115 3300005468 Ga0070707_100138600 Ga0070707_1001386002 272
116 3300005549 Ga0070704_100127612 Ga0070704_1001276122 272
117 3300005616 Ga0068852_100401789 Ga0068852_1004017892 272
118 3300007788 Ga0099795_10001324 Ga0099795_100013245 272
119 3300009011 Ga0105251_10000730 Ga0105251_100007302 272
120 3300009551 Ga0105238_10099280 Ga0105238_100992802 272
121 3300010159 Ga0099796_10003517 Ga0099796_100035176 272
122 3300025302 Ga0207426_1003394 Ga0207426_10033942 272
123 3300025922 Ga0207646_10152885 Ga0207646_101528852 272
124 3300031730 Ga0307516_10000679 Ga0307516_1000067936 272
125 3300031901 Ga0307406_10033511 Ga0307406_100335111 272
126 3300035725 Ga0373947_0020598 Ga0373947_0020598_1556_2611 272
127 3300046454 Ga0495592_0175203 Ga0495592_0175203_48_1103 272
128 3300046457 Ga0495590_0001006 Ga0495590_0001006_3934_4989 272
129 3300046477 Ga0495664_0076307 Ga0495664_0076307_123_1178 272
130 3300046491 Ga0495584_0015971 Ga0495584_0015971_481_1536 272
131 3300046515 Ga0495620_0048829 Ga0495620_0048829_681_1736 272
132 3300046542 Ga0495597_0004701 Ga0495597_0004701_3643_4698 272
133 3300046694 Ga0495649_0083086 Ga0495649_0083086_120_1175 272
134 3300047323 Ga0495683_0001006 Ga0495683_0001006_7506_8561 272
135 3300048903 Ga0496100_0007055 Ga0496100_0007055_1994_3049 272
136 3300048906 Ga0496103_0006300 Ga0496103_0006300_236_1291 272
137 3300048909 Ga0496106_0093918 Ga0496106_0093918_732_1787 272
138 3300048910 Ga0496107_0034248 Ga0496107_0034248_979_2034 272
139 3300048913 Ga0496110_0004366 Ga0496110_0004366_2811_3866 272
140 3300048915 Ga0496112_0052657 Ga0496112_0052657_2456_3511 272
141 3300048919 Ga0496116_0006409 Ga0496116_0006409_7758_8813 272
142 3300048920 Ga0496117_0010954 Ga0496117_0010954_2357_3412 272
143 3300048924 Ga0496121_0002057 Ga0496121_0002057_17139_18194 272
144 3300048925 Ga0496122_0012331 Ga0496122_0012331_2291_3346 272
145 3300048926 Ga0496123_0015579 Ga0496123_0015579_2575_3630 272
146 3300048927 Ga0496124_0018952 Ga0496124_0018952_2914_3969 272
147 3300049593 Ga0501077_0251590 Ga0501077_0251590_26_1075 272
148 3300049758 Ga0501241_002142 Ga0501241_002142_1391_2449 272
149 3300053077 Ga0495601_0000979 Ga0495601_0000979_3368_4423 272
150 3300053085 Ga0495619_0095699 Ga0495619_0095699_651_1706 272
151 3300044712 Ga0453684_0259090 Ga0453684_0259090_378_1433 273
152 3300053077 Ga0495601_0052620 Ga0495601_0052620_881_1933 273
153 3300054114 Ga0501084_0053878 Ga0501084_0053878_24_1091 273
154 iso_pu_bacteria 2904434214 2904439086 273
155 3300005445 Ga0070708_100084994 Ga0070708_1000849944 274
156 3300039447 Ga0436361_0049009 Ga0436361_0049009_1058_2122 274
157 3300049593 Ga0501077_0065088 Ga0501077_0065088_447_1514 274
158 3300005355 Ga0070671_100310514 Ga0070671_1003105141 275
159 3300005439 Ga0070711_100044395 Ga0070711_1000443952 275
160 3300005467 Ga0070706_100039531 Ga0070706_1000395312 275
161 3300005467 Ga0070706_100045011 Ga0070706_1000450114 275
162 3300005536 Ga0070697_100003430 Ga0070697_1000034307 275
163 3300005549 Ga0070704_100067747 Ga0070704_1000677472 275
164 3300005841 Ga0068863_100043084 Ga0068863_1000430842 275
165 3300005842 Ga0068858_100394998 Ga0068858_1003949981 275
166 3300005843 Ga0068860_100095049 Ga0068860_1000950492 275
167 3300006175 Ga0070712_100017319 Ga0070712_1000173193 275
168 3300009148 Ga0105243_10113665 Ga0105243_101136652 275
169 3300013306 Ga0163162_10293657 Ga0163162_102936572 275
170 3300025910 Ga0207684_10000942 Ga0207684_100009424 275
171 3300025915 Ga0207693_10026799 Ga0207693_100267992 275
172 3300025916 Ga0207663_10111650 Ga0207663_101116501 275
173 3300025922 Ga0207646_10005519 Ga0207646_1000551913 275
174 3300026088 Ga0207641_10023917 Ga0207641_100239171 275
175 3300042876 Ga0451577_0028148 Ga0451577_0028148_1180_2259 275
176 3300045051 Ga0451576_0128598 Ga0451576_0128598_425_1504 275
177 3300049741 Ga0501079_0115735 Ga0501079_0115735_219_1286 275
178 3300049743 Ga0501081_0262031 Ga0501081_0262031_149_1216 275
179 3300044656 Ga0466969_0011061 Ga0466969_0011061_655_1734 281
180 3300044683 Ga0466965_0025062 Ga0466965_0025062_81_1160 281
181 3300044684 Ga0466966_0012929 Ga0466966_0012929_1612_2691 281
182 3300044693 Ga0466961_0113855 Ga0466961_0113855_541_1620 281
183 3300044765 Ga0466970_0014439 Ga0466970_0014439_538_1617 281
184 3300044842 Ga0466957_0025821 Ga0466957_0025821_1863_2942 281
185 3300045049 Ga0466959_0009742 Ga0466959_0009742_782_1861 281
186 3300045836 Ga0466958_0002064 Ga0466958_0002064_4995_6074 281
187 3300061719 Ga0466962_0006514 Ga0466962_0006514_3424_4503 281
188 3300003316 rootH1_10051707 rootH1_100517073 283

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00892

EamA

EamA-like transporter family

153

286

0.95

PF00892

EamA

EamA-like transporter family

1

145

0.91

Structural Annotation

Top 5 Hits

ID Description Score Start End
7paf-assembly1.cif.gz_D streptococcus pneumoniae choline importer licb in lipid nanodiscs 0.7799 9 281
7paf-assembly1.cif.gz_D streptococcus pneumoniae choline importer licb in lipid nanodiscs 0.7648 9 281
7b0k-assembly1.cif.gz_A membrane protein structure 0.7625 4 281
5i20-assembly2.cif.gz_B crystal structure of protein 0.74 2 280
7b0k-assembly1.cif.gz_A membrane protein structure 0.7356 4 281
ID Description Score Start End Superfamily
af_Q47377_2_110_1.10.3730.20 Mainly Alpha;Orthogonal Bundle;ProC C-terminal domain-like fold; 0.7573 205 280 1.10.3730.20
af_Q20583_6_327_1.20.1740.10 Mainly Alpha;Up-down Bundle;Amino acid/polyamine transporter I;Amino acid/polyamine transporter I 0.7262 7 280 1.20.1740.10
af_Q20583_6_327_1.20.1740.10 Mainly Alpha;Up-down Bundle;Amino acid/polyamine transporter I;Amino acid/polyamine transporter I 0.7036 7 280 1.20.1740.10
af_A0A0P0WMA8_96_409_1.20.1740.10 Mainly Alpha;Up-down Bundle;Amino acid/polyamine transporter I;Amino acid/polyamine transporter I 0.6843 1 281 1.20.1740.10
af_Q8RY83_36_351_1.20.1740.10 Mainly Alpha;Up-down Bundle;Amino acid/polyamine transporter I;Amino acid/polyamine transporter I 0.6815 5 280 1.20.1740.10
ID Description Score Start End GO Terms
AF-A0A2W1JN07-F1-model_v4 EamA domain-containing protein 0.9569 27 280 GO:0005886
AF-G9XRS7-F1-model_v4 Putative membrane protein 0.9293 27 281 GO:0005886
AF-A0A843IN86-F1-model_v4 deleted 0.9242 37 281
AF-A0A1B2J2A2-F1-model_v4 EamA domain-containing protein 0.9212 27 280 GO:0005886
AF-A0A843M2T1-F1-model_v4 DMT family transporter 0.9152 26 281 GO:0005886

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pLDDT pTM Quality
82.52 0.83 High
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Predicted Structure (AlphaFold2)

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