F288380

General Info

Members Datasets Scaffolds Average Seq Length
187 139 374 240

Family's Representative Sequence

Representative Sequence 3300049584|Ga0501068_0072629|Ga0501068_0072629_180_998
Length 272
Sequence MASPAATIPSSRVERPEDREALFPATVSRILGWASLVCIGVLVAYGLFVAPPDAVQGDAQRLMYLHVPAAWLAYLAFGVTAIASALYLWPRTRARVWDRVAGSSAELGVLFTALTLVLGSLWGKPVWDVWWAWDARLVTTAVLFFLYLGYLALRRIPAEPDTAAKRNAIAALIAFVDVPIVHFSVEWWRTLHQKATVFNPELDAHIHGVMALTLWFGVVAFTVLYVYLLDRRYRLAALEEGRDDLELERAIAERVAGAGMVGTSGADGGAVR

Samples

Sample ID Description Type Environment
1 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
2 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
3 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
4 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
5 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
6 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
7 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
8 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
9 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
10 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
11 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
12 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
13 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
14 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
15 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
16 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
17 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
18 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
19 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
20 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
21 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
22 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
23 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
24 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
25 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
26 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
27 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
28 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
29 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
30 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
31 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
32 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
33 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
34 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
35 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
36 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
37 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
38 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
39 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
40 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
41 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
42 3300020081 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
43 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
55 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
56 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
57 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
58 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
59 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
60 3300035084 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_1 Metagenome Rhizosphere
61 3300035085 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_2 Metagenome Rhizosphere
62 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
63 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
64 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
65 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
66 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
67 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
68 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
69 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
70 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
71 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
72 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
73 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
74 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
75 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
76 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
77 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
78 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
79 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
80 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
81 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
82 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
83 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
84 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
85 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
86 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
87 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
88 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
89 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
90 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
91 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
92 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
93 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
94 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
95 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
96 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
97 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
98 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
99 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
100 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
101 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
102 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
103 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
104 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
105 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
106 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
107 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
108 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
109 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
110 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
111 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
112 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
113 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
114 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
115 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
116 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
117 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
118 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
119 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
120 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
121 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
122 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
123 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
124 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
125 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
126 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
127 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
128 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
129 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
130 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
131 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
132 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
133 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
134 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
135 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
136 2622736626 Micromonospora rhizosphaerae DSM 45431 Isolate Rhizosphere
137 2858868258 Micromonospora sp. MH33 Isolate Unclassified
138 2902582711 Micromonospora sp. AP08 Isolate Unclassified
139 2929219909 Micromonospora sp. R-75348 Hybrid assembly Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 97.33
Metatranscriptomes 0.53
Isolates 2.14

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 8.56
Nodule 0
Rhizoplane 7.49
Rhizosphere 81.82
Stem 0
Stem Tuber 0
Unclassified 13.9

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0501068_0072629 3300049584 Bacteria 2101
2 Ga0070671_100035514 3300005355 Bacteria 4129
3 Ga0070713_100550739 3300005436 Bacteria 1092
4 Ga0070713_100583076 3300005436 Bacteria 1061
5 Ga0070700_100359476 3300005441 Unclassified 1082
6 Ga0070708_100015826 3300005445 Bacteria 6237
7 Ga0070708_100348017 3300005445 Bacteria 1396
8 Ga0070678_100173299 3300005456 Bacteria 1759
9 Ga0070681_10020484 3300005458 Bacteria 6629
10 Ga0068867_100739273 3300005459 Unclassified 872
11 Ga0070706_100000894 3300005467 Bacteria 32671
12 Ga0070706_100014822 3300005467 Bacteria 7205
13 Ga0070706_100029332 3300005467 Bacteria 5069
14 Ga0070707_100003662 3300005468 Bacteria 14489
15 Ga0070707_100095287 3300005468 Bacteria 2882
16 Ga0070698_100014994 3300005471 Bacteria 8193
17 Ga0070698_100044763 3300005471 Bacteria 4529
18 Ga0070699_100000028 3300005518 Bacteria 156839
19 Ga0070699_100462990 3300005518 Bacteria 1150
20 Ga0070679_100050754 3300005530 Bacteria 4132
21 Ga0070697_100122553 3300005536 Bacteria 2176
22 Ga0070696_100582664 3300005546 Unclassified 900
23 Ga0070702_100291327 3300005615 Bacteria 1125
24 Ga0068852_100526310 3300005616 Bacteria 1180
25 Ga0068858_100002996 3300005842 Bacteria 16933
26 Ga0081455_10105372 3300005937 Bacteria 2253
27 Ga0081539_10029517 3300005985 Bacteria 3424
28 Ga0070717_10000157 3300006028 Bacteria 51356
29 Ga0070717_10001303 3300006028 Bacteria 17056
30 Ga0070717_10807224 3300006028 Bacteria 854
31 Ga0075365_10230049 3300006038 Bacteria 1301
32 Ga0075365_10407203 3300006038 Bacteria 960
33 Ga0075363_100228081 3300006048 Bacteria 1069
34 Ga0075363_100279683 3300006048 Bacteria 965
35 Ga0075364_10124692 3300006051 Bacteria 1726
36 Ga0075362_10034316 3300006177 Bacteria 2211
37 Ga0075369_10099967 3300006186 Bacteria 1301
38 Ga0075428_100125979 3300006844 Bacteria 2787
39 Ga0075430_100177232 3300006846 Unclassified 1773
40 Ga0075430_100220552 3300006846 Unclassified 1573
41 Ga0075431_100014758 3300006847 Bacteria 7910
42 Ga0075431_100224316 3300006847 Bacteria 1916
43 Ga0075433_10209932 3300006852 Unclassified 1730
44 Ga0075434_100033369 3300006871 Bacteria 5080
45 Ga0075429_100132501 3300006880 Unclassified 2181
46 Ga0075436_100024523 3300006914 Bacteria 4145
47 Ga0075435_100001803 3300007076 Bacteria 13930
48 Ga0105245_10000647 3300009098 Bacteria 31613
49 Ga0114129_10035080 3300009147 Bacteria 7087
50 Ga0114129_10133330 3300009147 Bacteria 3411
51 Ga0114129_10168968 3300009147 Bacteria 2982
52 Ga0114129_10657478 3300009147 Bacteria 1352
53 Ga0114129_10740913 3300009147 Unclassified 1259
54 Ga0105243_10181507 3300009148 Bacteria 1831
55 Ga0105243_10539439 3300009148 Unclassified 1112
56 Ga0105242_10813319 3300009176 Unclassified 926
57 Ga0105248_10632920 3300009177 Bacteria 1207
58 Ga0105237_10266549 3300009545 Bacteria 1716
59 Ga0157376_10168181 3300014969 Bacteria 1994
60 Ga0206354_11607521 3300020081 Bacteria 2023
61 Ga0207684_10000054 3300025910 Bacteria 220915
62 Ga0207684_10091577 3300025910 Bacteria 2591
63 Ga0207671_10216586 3300025914 Bacteria 1499
64 Ga0207646_10003586 3300025922 Bacteria 17398
65 Ga0207646_10069860 3300025922 Bacteria 3137
66 Ga0207646_10340722 3300025922 Bacteria 1355
67 Ga0207650_10260339 3300025925 Bacteria 1407
68 Ga0207687_10040000 3300025927 Bacteria 3212
69 Ga0207687_10286089 3300025927 Bacteria 1323
70 Ga0207700_10176368 3300025928 Unclassified 1786
71 Ga0207700_10444436 3300025928 Bacteria 1142
72 Ga0207700_10482115 3300025928 Bacteria 1096
73 Ga0207644_10022894 3300025931 Bacteria 4272
74 Ga0207669_10352240 3300025937 Bacteria 1138
75 Ga0207679_10212765 3300025945 Unclassified 1622
76 Ga0207703_10003513 3300026035 Bacteria 13110
77 Ga0207683_10246926 3300026121 Unclassified 1628
78 Ga0265327_10007303 3300031251 Bacteria 8567
79 Ga0265327_10030941 3300031251 Bacteria 3015
80 Ga0307410_10013450 3300031852 Bacteria 4776
81 Ga0307412_10116781 3300031911 Bacteria 1915
82 Ga0307409_100033118 3300031995 Bacteria 3756
83 Ga0307409_100912602 3300031995 Bacteria 893
84 Ga0307416_100007268 3300032002 Bacteria 7021
85 Ga0307415_100015160 3300032126 Bacteria 4555
86 Ga0373928_0000224 3300035084 Bacteria 11011
87 Ga0373929_0003401 3300035085 Bacteria 2871
88 Ga0373929_0021157 3300035085 Bacteria 1317
89 Ga0373932_0013387 3300035112 Bacteria 2039
90 Ga0373943_0271970 3300035170 Unclassified 956
91 Ga0373931_0000029 3300035691 Bacteria 116290
92 Ga0373931_0000033 3300035691 Bacteria 94739
93 Ga0373935_0205674 3300035692 Bacteria 1362
94 Ga0395898_0325527 3300037466 Bacteria 1466
95 Ga0395901_0031773 3300038443 Bacteria 5444
96 Ga0436365_0753298 3300039437 Unclassified 1960
97 Ga0451577_0333363 3300042876 Unclassified 1376
98 Ga0466966_0488626 3300044684 Unclassified 740
99 Ga0466963_0012095 3300044694 Bacteria 5274
100 Ga0453684_0029980 3300044712 Bacteria 7701
101 Ga0453684_0564109 3300044712 Bacteria 1252
102 Ga0466971_0049386 3300044719 Bacteria 1893
103 Ga0466960_0033724 3300044901 Bacteria 2381
104 Ga0466967_0251210 3300045976 Bacteria 1689
105 Ga0495603_0183140 3300046455 Bacteria 1212
106 Ga0495651_0250474 3300046462 Bacteria 1210
107 Ga0495653_0027528 3300046463 Bacteria 4548
108 Ga0495618_0037206 3300046514 Bacteria 3056
109 Ga0495628_0022045 3300046516 Bacteria 5235
110 Ga0495630_0076462 3300046517 Bacteria 2522
111 Ga0495630_0241541 3300046517 Bacteria 1380
112 Ga0495666_0044382 3300046526 Bacteria 2146
113 Ga0495667_0137494 3300046559 Bacteria 1575
114 Ga0495588_0102055 3300046674 Bacteria 1508
115 Ga0495647_0088227 3300046681 Bacteria 1268
116 Ga0495658_0014273 3300046683 Bacteria 4056
117 Ga0495658_0022158 3300046683 Bacteria 3357
118 Ga0495581_0074317 3300047315 Unclassified 1967
119 Ga0495674_0118155 3300047319 Bacteria 2242
120 Ga0495684_0011887 3300047471 Bacteria 6715
121 Ga0496101_0018384 3300048904 Bacteria 4753
122 Ga0496102_0079310 3300048905 Bacteria 3024
123 Ga0496102_0439192 3300048905 Unclassified 1225
124 Ga0496104_0038898 3300048907 Bacteria 4452
125 Ga0496105_0002223 3300048908 Bacteria 14062
126 Ga0496107_0014312 3300048910 Bacteria 5555
127 Ga0496108_0045681 3300048911 Bacteria 3658
128 Ga0496109_0485413 3300048912 Bacteria 1166
129 Ga0496110_0265402 3300048913 Bacteria 1563
130 Ga0496111_0270080 3300048914 Bacteria 1262
131 Ga0496112_0097597 3300048915 Bacteria 2909
132 Ga0496113_0190762 3300048916 Bacteria 1627
133 Ga0496114_0134725 3300048917 Bacteria 2135
134 Ga0496115_0001622 3300048918 Bacteria 16193
135 Ga0501034_0006150 3300049571 Bacteria 12944
136 Ga0501036_0023801 3300049572 Bacteria 5161
137 Ga0501036_0308110 3300049572 Unclassified 1324
138 Ga0501038_0219426 3300049574 Unclassified 1518
139 Ga0501038_0230782 3300049574 Bacteria 1473
140 Ga0501043_0034801 3300049579 Bacteria 3962
141 Ga0501043_0444012 3300049579 Bacteria 976
142 Ga0501046_0005801 3300049580 Bacteria 11016
143 Ga0501047_0337121 3300049581 Bacteria 1346
144 Ga0501048_0138346 3300049582 Bacteria 1721
145 Ga0501069_0033175 3300049585 Bacteria 2843
146 Ga0501070_0010945 3300049586 Bacteria 7659
147 Ga0501072_0532233 3300049588 Bacteria 929
148 Ga0501074_0105358 3300049590 Bacteria 2019
149 Ga0501079_0405980 3300049741 Unclassified 1069
150 Ga0501080_0008236 3300049742 Bacteria 9440
151 Ga0501080_0256535 3300049742 Bacteria 1594
152 Ga0501044_0019119 3300049823 Bacteria 7334
153 nmdc:mga03683_14977_c1 3300050489 Bacteria 2883
154 nmdc:mga03n38_91001_c1 3300050490 Bacteria 1452
155 nmdc:mga00v17_155596_c1 3300050491 Bacteria 1470
156 nmdc:mga00v17_197493_c1 3300050491 Bacteria 1300
157 nmdc:mga0yw44_2787_c1 3300050492 Bacteria 7570
158 nmdc:mga0yw44_287984_c1 3300050492 Bacteria 1099
159 nmdc:mga0yw44_73156_c1 3300050492 Bacteria 2132
160 nmdc:mga05p37_176309_c1 3300050507 Bacteria 2604
161 nmdc:mga05p37_176681_c1 3300050507 Bacteria 2601
162 nmdc:mga05p37_694899_c1 3300050507 Bacteria 1131
163 nmdc:mga09592_26212_c1 3300050508 Bacteria 4829
164 nmdc:mga09592_357347_c1 3300050508 Bacteria 1264
165 nmdc:mga0qj67_165065_c1 3300050509 Unclassified 1798
166 nmdc:mga0qj67_259761_c1 3300050509 Bacteria 1409
167 nmdc:mga0qj67_374180_c1 3300050509 Bacteria 1150
168 nmdc:mga0qj67_64253_c1 3300050509 Bacteria 2919
169 nmdc:mga06r32_15846_c1 3300050510 Bacteria 6856
170 nmdc:mga06r32_181857_c1 3300050510 Bacteria 2088
171 nmdc:mga08y16_363384_c1 3300050511 Unclassified 1486
172 nmdc:mga0n895_30798_c1 3300050512 Bacteria 5131
173 nmdc:mga0rr50_315620_c1 3300050513 Unclassified 1310
174 nmdc:mga08x19_18237_c1 3300050514 Bacteria 4301
175 nmdc:mga0a205_2782_c1 3300050515 Bacteria 15462
176 nmdc:mga0sz30_59966_c1 3300050516 Bacteria 1624
177 Ga0495619_0080734 3300053085 Bacteria 2189
178 Ga0500566_0000830 3300053094 Bacteria 17650
179 Ga0501084_0000059 3300054114 Bacteria 86630
180 Ga0501084_0536911 3300054114 Bacteria 988
181 Ga0501082_0090001 3300060353 Bacteria 2650
182 Ga0466962_0015251 3300061719 Bacteria 3705
183 Ga0466962_0248277 3300061719 Unclassified 874
184 2623589515 2622736626 Bacteria 7181580
185 2858872743 2858868258 Bacteria 7683772
186 2902585035 2902582711 Bacteria 6187705
187 2929223919 2929219909 Bacteria 6984360
188 Ga0501068_0072629
189 Ga0070671_100035514
190 Ga0070713_100550739
191 Ga0070713_100583076
192 Ga0070700_100359476
193 Ga0070708_100015826
194 Ga0070708_100348017
195 Ga0070678_100173299
196 Ga0070681_10020484
197 Ga0068867_100739273
198 Ga0070706_100000894
199 Ga0070706_100014822
200 Ga0070706_100029332
201 Ga0070707_100003662
202 Ga0070707_100095287
203 Ga0070698_100014994
204 Ga0070698_100044763
205 Ga0070699_100000028
206 Ga0070699_100462990
207 Ga0070679_100050754
208 Ga0070697_100122553
209 Ga0070696_100582664
210 Ga0070702_100291327
211 Ga0068852_100526310
212 Ga0068858_100002996
213 Ga0081455_10105372
214 Ga0081539_10029517
215 Ga0070717_10000157
216 Ga0070717_10001303
217 Ga0070717_10807224
218 Ga0075365_10230049
219 Ga0075365_10407203
220 Ga0075363_100228081
221 Ga0075363_100279683
222 Ga0075364_10124692
223 Ga0075362_10034316
224 Ga0075369_10099967
225 Ga0075428_100125979
226 Ga0075430_100177232
227 Ga0075430_100220552
228 Ga0075431_100014758
229 Ga0075431_100224316
230 Ga0075433_10209932
231 Ga0075434_100033369
232 Ga0075429_100132501
233 Ga0075436_100024523
234 Ga0075435_100001803
235 Ga0105245_10000647
236 Ga0114129_10035080
237 Ga0114129_10133330
238 Ga0114129_10168968
239 Ga0114129_10657478
240 Ga0114129_10740913
241 Ga0105243_10181507
242 Ga0105243_10539439
243 Ga0105242_10813319
244 Ga0105248_10632920
245 Ga0105237_10266549
246 Ga0157376_10168181
247 Ga0206354_11607521
248 Ga0207684_10000054
249 Ga0207684_10091577
250 Ga0207671_10216586
251 Ga0207646_10003586
252 Ga0207646_10069860
253 Ga0207646_10340722
254 Ga0207650_10260339
255 Ga0207687_10040000
256 Ga0207687_10286089
257 Ga0207700_10176368
258 Ga0207700_10444436
259 Ga0207700_10482115
260 Ga0207644_10022894
261 Ga0207669_10352240
262 Ga0207679_10212765
263 Ga0207703_10003513
264 Ga0207683_10246926
265 Ga0265327_10007303
266 Ga0265327_10030941
267 Ga0307410_10013450
268 Ga0307412_10116781
269 Ga0307409_100033118
270 Ga0307409_100912602
271 Ga0307416_100007268
272 Ga0307415_100015160
273 Ga0373928_0000224
274 Ga0373929_0003401
275 Ga0373929_0021157
276 Ga0373932_0013387
277 Ga0373943_0271970
278 Ga0373931_0000029
279 Ga0373931_0000033
280 Ga0373935_0205674
281 Ga0395898_0325527
282 Ga0395901_0031773
283 Ga0436365_0753298
284 Ga0451577_0333363
285 Ga0466966_0488626
286 Ga0466963_0012095
287 Ga0453684_0029980
288 Ga0453684_0564109
289 Ga0466971_0049386
290 Ga0466960_0033724
291 Ga0466967_0251210
292 Ga0495603_0183140
293 Ga0495651_0250474
294 Ga0495653_0027528
295 Ga0495618_0037206
296 Ga0495628_0022045
297 Ga0495630_0076462
298 Ga0495630_0241541
299 Ga0495666_0044382
300 Ga0495667_0137494
301 Ga0495588_0102055
302 Ga0495647_0088227
303 Ga0495658_0014273
304 Ga0495658_0022158
305 Ga0495581_0074317
306 Ga0495674_0118155
307 Ga0495684_0011887
308 Ga0496101_0018384
309 Ga0496102_0079310
310 Ga0496102_0439192
311 Ga0496104_0038898
312 Ga0496105_0002223
313 Ga0496107_0014312
314 Ga0496108_0045681
315 Ga0496109_0485413
316 Ga0496110_0265402
317 Ga0496111_0270080
318 Ga0496112_0097597
319 Ga0496113_0190762
320 Ga0496114_0134725
321 Ga0496115_0001622
322 Ga0501034_0006150
323 Ga0501036_0023801
324 Ga0501036_0308110
325 Ga0501038_0219426
326 Ga0501038_0230782
327 Ga0501043_0034801
328 Ga0501043_0444012
329 Ga0501046_0005801
330 Ga0501047_0337121
331 Ga0501048_0138346
332 Ga0501069_0033175
333 Ga0501070_0010945
334 Ga0501072_0532233
335 Ga0501074_0105358
336 Ga0501079_0405980
337 Ga0501080_0008236
338 Ga0501080_0256535
339 Ga0501044_0019119
340 nmdc:mga03683_14977_c1
341 nmdc:mga03n38_91001_c1
342 nmdc:mga00v17_155596_c1
343 nmdc:mga00v17_197493_c1
344 nmdc:mga0yw44_2787_c1
345 nmdc:mga0yw44_287984_c1
346 nmdc:mga0yw44_73156_c1
347 nmdc:mga05p37_176309_c1
348 nmdc:mga05p37_176681_c1
349 nmdc:mga05p37_694899_c1
350 nmdc:mga09592_26212_c1
351 nmdc:mga09592_357347_c1
352 nmdc:mga0qj67_165065_c1
353 nmdc:mga0qj67_259761_c1
354 nmdc:mga0qj67_374180_c1
355 nmdc:mga0qj67_64253_c1
356 nmdc:mga06r32_15846_c1
357 nmdc:mga06r32_181857_c1
358 nmdc:mga08y16_363384_c1
359 nmdc:mga0n895_30798_c1
360 nmdc:mga0rr50_315620_c1
361 nmdc:mga08x19_18237_c1
362 nmdc:mga0a205_2782_c1
363 nmdc:mga0sz30_59966_c1
364 Ga0495619_0080734
365 Ga0500566_0000830
366 Ga0501084_0000059
367 Ga0501084_0536911
368 Ga0501082_0090001
369 Ga0466962_0015251
370 Ga0466962_0248277
371 2623589515
372 2858872743
373 2902585035
374 2929223919

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01578

Cytochrom_C_asm

Cytochrome C assembly protein

21

192

0.93

Structural Annotation

Top 5 Hits

ID Description Score Start End
7f02-assembly1.cif.gz_C cytochrome c-type biogenesis protein ccmabcd from e. coli 0.8721 15 227
7f02-assembly1.cif.gz_C cytochrome c-type biogenesis protein ccmabcd from e. coli 0.7912 15 227
1oed-assembly1.cif.gz_E structure of acetylcholine receptor pore from electron images 0.6253 58 178
7s9y-assembly1.cif.gz_A helicobacter hepaticus ccsba open conformation 0.6226 49 212
7c7s-assembly1.cif.gz_A cryo-em structure of the cgp54626-bound human gaba(b) receptor in inactive state. 0.6148 92 181
ID Description Score Start End Superfamily
af_Q8S8F1_85_256_1.20.120.1770 Mainly Alpha;Up-down Bundle;Four Helix Bundle (Hemerythrin (Met), subunit A); 0.6977 49 179 1.20.120.1770
af_A0A1D6JN65_108_240_1.20.120.1770 Mainly Alpha;Up-down Bundle;Four Helix Bundle (Hemerythrin (Met), subunit A); 0.6886 53 179 1.20.120.1770
af_A0A1D6JN65_108_240_1.20.120.1770 Mainly Alpha;Up-down Bundle;Four Helix Bundle (Hemerythrin (Met), subunit A); 0.6588 53 179 1.20.120.1770
1oedE00 Mainly Alpha;Up-down Bundle;Methane Monooxygenase Hydroxylase; Chain G, domain 1;Neurotransmitter-gated ion-channel transmembrane domain 0.6253 58 178 1.20.58.390
1y4cA03 Mainly Alpha;Up-down Bundle;Four Helix Bundle (Hemerythrin (Met), subunit A);IL-4 antagonist (De novo design) like domain 0.6037 46 173 1.20.120.660
ID Description Score Start End GO Terms
AF-A0A1N6ZL81-F1-model_v4 Heme exporter protein C 0.9122 12 227 GO:0005886
GO:0015232
GO:0017004
GO:0020037
AF-A0A7V9SP18-F1-model_v4 Heme exporter protein C 0.9111 15 247 GO:0005886
GO:0015232
GO:0017004
GO:0020037
AF-A0A538FND0-F1-model_v4 Heme exporter protein C 0.9007 15 244 GO:0005886
GO:0015232
GO:0017004
GO:0020037
AF-F5L3F0-F1-model_v4 Heme exporter protein C 0.8998 9 236 GO:0005886
GO:0015232
GO:0017004
GO:0020037
AF-A0A5E4KQP4-F1-model_v4 Cytochrome c biogenesis protein CcsA 0.899 15 229 GO:0005886
GO:0015232
GO:0017004
GO:0020037

Map