F287599

General Info

Members Datasets Scaffolds Average Seq Length
187 123 374 367

Family's Representative Sequence

Representative Sequence 3300009174|Ga0105241_10041044|Ga0105241_100410442
Length 393
Sequence MSPADCRHSRSFATHGKSRLRVNSVVPLIHPLRHTGRRWVHEALECLAQEAARSADTHLLKLNFPGFHGIDFYFKDEASHPSGSLKHRLARSLYLYALCNGRLGPDQTVVDASSGSTAISEAWFARLLGLRFVAVMPACTAPGKIRDVQALGGEVDLVDDPAKVHARAAEHAARGACHLDQFGLAERATDWRGNNNIAESIIGQLARERSPEPHWIVCGAGTGGTSATIGRYLRYRRLHTRLCIADPVGSGFVCGWQSNDRSAVASRPTLIEGIGRPRVEPGFVFEVVDHVIGVPEEASIAGAWLLGELFGHRYGGSSGTNFVACLTLAATMRTEGQRGSIVSLLCDRGERYAETLFDPHWLTAHGIDRSHSEASLRHSIETGCAPLRRAASA

Samples

Sample ID Description Type Environment
1 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
2 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
3 3300002741 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL Metagenome Unclassified
4 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
5 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
6 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
7 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
8 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
9 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
10 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
11 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
12 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
13 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
14 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
15 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
16 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
17 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
18 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
19 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
20 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
21 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
22 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
23 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
24 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
25 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
26 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
27 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
28 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
29 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
30 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
31 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
32 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
33 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
34 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
35 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
36 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
37 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
38 3300015685 Plant tissue microbial consortia from sugarcane, Campinas, Sao Paulo, Brazil - 002.5_G12 Metagenome Unclassified
39 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
40 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
41 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
42 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
43 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
44 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
45 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
46 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
47 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300027360 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 PM (SPAdes) (version 2) Metagenome Rhizosphere
66 3300027471 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 AM (SPAdes) (version 2) Metagenome Rhizosphere
67 3300027543 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 AM (SPAdes) (version 2) Metagenome Rhizosphere
68 3300027552 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S AM (SPAdes) (version 2) Metagenome Rhizosphere
69 3300027614 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co S AM (SPAdes) (version 2) Metagenome Rhizosphere
70 3300027665 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S PM (SPAdes) (version 2) Metagenome Rhizosphere
71 3300027682 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM (SPAdes) (version 2) Metagenome Rhizosphere
72 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
73 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
74 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
75 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
76 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
77 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
78 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
79 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
80 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
81 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
82 3300041451 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_3 MetaG Metagenome Rhizoplane
83 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
84 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
85 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
86 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
87 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
88 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
89 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
90 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
91 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
92 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
93 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
94 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
95 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
96 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
97 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
98 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
99 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
100 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
101 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
102 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
103 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
104 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
105 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
106 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
107 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
108 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
109 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
110 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
111 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
112 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
113 2537561836 Rhodanobacter spathiphylli B39 Isolate Unclassified
114 2547132181 Kosakonia sacchari SP1 Isolate Stem
115 2561511199 Enterobacter sp. R4-368 Isolate Nodule
116 2571042365 Lysobacter oryzae DSM 21044 Isolate Rhizosphere
117 2643221562 Rhodanobacter sp. Root561 Isolate Unclassified
118 2687453130 Dyella thiooxydans ATSB10 Isolate Unclassified
119 2791355010 Kosakonia pseudosacchari NN143 Isolate Unclassified
120 2863067949 Saccharopolyspora phatthalungensis DSM 45584 (Annotation) (version 2) Isolate Rhizosphere
121 2895395659 Rhodanobacter sp. T12-5 Isolate Unclassified
122 2939611941 Rhodanobacter soli 1757 Isolate Rhizosphere
123 8002869464 Pseudoxanthomonas helianthi 110414 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 93.05
Metatranscriptomes 1.07
Isolates 5.88

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.21
Nodule 0.53
Rhizoplane 1.6
Rhizosphere 86.63
Stem 0.53
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0105241_10041044 3300009174 Bacteria 3494
2 JGI25162J39368_1001193 3300002737 Bacteria 15244
3 JGI25157J39369_1000425 3300002741 Bacteria 27809
4 JGI25157J39369_1004025 3300002741 Bacteria 2792
5 JGI25165J46597_1000379 3300003214 Bacteria 48698
6 Ga0070658_10212032 3300005327 Bacteria 1636
7 Ga0070680_100296856 3300005336 Bacteria 1370
8 Ga0070682_100004557 3300005337 Bacteria 7706
9 Ga0070661_100035604 3300005344 Bacteria 3615
10 Ga0070671_100101826 3300005355 Bacteria 2410
11 Ga0070671_100233606 3300005355 Bacteria 1560
12 Ga0070674_100112197 3300005356 Bacteria 2004
13 Ga0070659_100043600 3300005366 Bacteria 3508
14 Ga0070659_100044900 3300005366 Bacteria 3461
15 Ga0070714_100000209 3300005435 Bacteria 47271
16 Ga0070714_100005590 3300005435 Bacteria 9606
17 Ga0070714_100008554 3300005435 Bacteria 8002
18 Ga0070713_100020822 3300005436 Bacteria 5035
19 Ga0070710_10017486 3300005437 Bacteria 3671
20 Ga0070662_100095427 3300005457 Bacteria 2241
21 Ga0070681_10012143 3300005458 Bacteria 8543
22 Ga0070681_10027614 3300005458 Bacteria 5706
23 Ga0070679_100120311 3300005530 Bacteria 2611
24 Ga0070679_100238243 3300005530 Bacteria 1778
25 Ga0070679_100303992 3300005530 Bacteria 1546
26 Ga0068853_100264090 3300005539 Bacteria 1583
27 Ga0070672_100002084 3300005543 Bacteria 12600
28 Ga0070696_100190714 3300005546 Bacteria 1525
29 Ga0070693_100056956 3300005547 Bacteria 2257
30 Ga0068855_100012611 3300005563 Bacteria 10200
31 Ga0068855_100155319 3300005563 Bacteria 2600
32 Ga0068856_100045373 3300005614 Bacteria 4327
33 Ga0068856_100054243 3300005614 Bacteria 3953
34 Ga0105240_10007745 3300009093 Bacteria 15536
35 Ga0105240_10119051 3300009093 Bacteria 3182
36 Ga0105245_10082060 3300009098 Bacteria 2949
37 Ga0105245_10217986 3300009098 Bacteria 1840
38 Ga0105248_10032196 3300009177 Bacteria 5861
39 Ga0105237_10001315 3300009545 Bacteria 32979
40 Ga0105237_10038793 3300009545 Bacteria 4810
41 Ga0105237_10181762 3300009545 Bacteria 2103
42 Ga0105238_10013663 3300009551 Bacteria 8199
43 Ga0105238_10022760 3300009551 Bacteria 6386
44 Ga0105238_10085067 3300009551 Bacteria 3152
45 Ga0105238_10282288 3300009551 Bacteria 1642
46 Ga0157373_10004598 3300013100 Bacteria 10377
47 Ga0157373_10171598 3300013100 Bacteria 1526
48 Ga0157371_10010207 3300013102 Bacteria 7335
49 Ga0157371_10043158 3300013102 Bacteria 3213
50 Ga0157371_10044215 3300013102 Bacteria 3171
51 Ga0157371_10050890 3300013102 Bacteria 2944
52 Ga0157370_10004714 3300013104 Bacteria 15541
53 Ga0157370_10037206 3300013104 Bacteria 4718
54 Ga0157370_10042054 3300013104 Bacteria 4405
55 Ga0157369_10087506 3300013105 Bacteria 3326
56 Ga0157369_10204851 3300013105 Bacteria 2069
57 Ga0157372_10358908 3300013307 Bacteria 1698
58 Ga0157375_10030411 3300013308 Bacteria 5092
59 Ga0182008_10023534 3300014497 Bacteria 3144
60 Ga0157376_10203332 3300014969 Bacteria 1824
61 Ga0182006_1063127 3300015261 Bacteria 1392
62 Ga0183369_1021 3300015685 Bacteria 110842
63 Ga0206356_10908469 3300020070 Bacteria 1589
64 Ga0206353_10966223 3300020082 Bacteria 6672
65 Ga0207427_100101 3300025231 Bacteria 120866
66 Ga0209437_100090 3300025233 Bacteria 247138
67 Ga0209646_1002620 3300025246 Bacteria 3872
68 Ga0209026_1000114 3300025250 Bacteria 136985
69 Ga0209026_1002707 3300025250 Bacteria 6385
70 Ga0209233_1000077 3300025261 Bacteria 349570
71 Ga0209455_1000254 3300025272 Bacteria 62595
72 Ga0207692_10014320 3300025898 Bacteria 3463
73 Ga0207647_10002201 3300025904 Bacteria 14867
74 Ga0207705_10040724 3300025909 Bacteria 3333
75 Ga0207695_10001324 3300025913 Bacteria 41996
76 Ga0207695_10023803 3300025913 Bacteria 6912
77 Ga0207671_10000462 3300025914 Bacteria 55713
78 Ga0207671_10062077 3300025914 Bacteria 2774
79 Ga0207657_10041098 3300025919 Bacteria 4091
80 Ga0207657_10063773 3300025919 Bacteria 3148
81 Ga0207694_10012417 3300025924 Bacteria 6420
82 Ga0207650_10092536 3300025925 Bacteria 2313
83 Ga0207650_10092636 3300025925 Bacteria 2312
84 Ga0207700_10006738 3300025928 Bacteria 6976
85 Ga0207664_10000135 3300025929 Bacteria 63546
86 Ga0207664_10001594 3300025929 Bacteria 14913
87 Ga0207664_10008842 3300025929 Bacteria 7045
88 Ga0207690_10003605 3300025932 Bacteria 9219
89 Ga0207690_10004321 3300025932 Bacteria 8391
90 Ga0207691_10006611 3300025940 Bacteria 11193
91 Ga0207711_10029222 3300025941 Bacteria 4647
92 Ga0207667_10011114 3300025949 Bacteria 10482
93 Ga0207667_10058212 3300025949 Bacteria 4054
94 Ga0207651_10133006 3300025960 Bacteria 1908
95 Ga0207678_10004437 3300026067 Bacteria 12622
96 Ga0207678_10071416 3300026067 Bacteria 2977
97 Ga0207702_10028099 3300026078 Bacteria 4673
98 Ga0207674_10027147 3300026116 Bacteria 6063
99 Ga0209969_1005416 3300027360 Bacteria 1788
100 Ga0209995_1002795 3300027471 Bacteria 2766
101 Ga0209999_1003745 3300027543 Bacteria 2725
102 Ga0209982_1004144 3300027552 Bacteria 2071
103 Ga0209970_1012790 3300027614 Bacteria 1389
104 Ga0209983_1002186 3300027665 Bacteria 4303
105 Ga0209971_1000369 3300027682 Bacteria 12297
106 Ga0209974_10008821 3300027876 Bacteria 3437
107 Ga0307413_10010888 3300031824 Bacteria 4439
108 Ga0307413_10013081 3300031824 Bacteria 4156
109 Ga0307410_10130252 3300031852 Bacteria 1847
110 Ga0307414_10013087 3300032004 Bacteria 4929
111 Ga0307414_10109868 3300032004 Bacteria 2096
112 Ga0307414_10194545 3300032004 Bacteria 1644
113 Ga0307411_10014673 3300032005 Bacteria 4370
114 Ga0395899_0037937 3300037312 Bacteria 3612
115 Ga0395900_0036456 3300037418 Bacteria 5070
116 Ga0395898_0011640 3300037466 Bacteria 9126
117 Ga0395898_0405864 3300037466 Bacteria 1299
118 Ga0395905_0176508 3300037471 Bacteria 2006
119 Ga0395901_0001304 3300038443 Bacteria 26281
120 Ga0395901_0054560 3300038443 Bacteria 4154
121 Ga0395901_0090477 3300038443 Bacteria 3203
122 Ga0451791_0103606 3300041451 Bacteria 3379
123 Ga0451807_1184891 3300041486 Bacteria 1348
124 Ga0451837_1096112 3300041494 Bacteria 4295
125 Ga0439448_0015960 3300042005 Bacteria 2281
126 Ga0439432_007154 3300042006 Bacteria 3966
127 Ga0495663_0026931 3300046525 Bacteria 1685
128 Ga0495621_0000271 3300046539 Bacteria 12420
129 Ga0495656_0005419 3300046615 Bacteria 4404
130 Ga0495668_0036679 3300046616 Bacteria 2746
131 Ga0495588_0152981 3300046674 Bacteria 1219
132 Ga0495658_0103480 3300046683 Bacteria 1703
133 Ga0495636_0001671 3300047318 Bacteria 8453
134 Ga0495636_0013556 3300047318 Bacteria 3234
135 Ga0496113_0012884 3300048916 Bacteria 5638
136 Ga0496119_0001155 3300048922 Bacteria 33099
137 Ga0501031_0069164 3300049568 Bacteria 2300
138 Ga0501032_0003364 3300049569 Bacteria 12276
139 Ga0501033_0001210 3300049570 Bacteria 23194
140 Ga0501033_0012617 3300049570 Bacteria 6449
141 Ga0501034_0000544 3300049571 Bacteria 59969
142 Ga0501034_0002057 3300049571 Bacteria 25184
143 Ga0501034_0010411 3300049571 Bacteria 9692
144 Ga0501036_0018668 3300049572 Bacteria 5815
145 Ga0501036_0137522 3300049572 Bacteria 2062
146 Ga0501037_0011730 3300049573 Bacteria 6452
147 Ga0501039_0027973 3300049575 Bacteria 4337
148 Ga0501039_0165377 3300049575 Bacteria 1739
149 Ga0501043_0038714 3300049579 Bacteria 3749
150 Ga0501043_0103509 3300049579 Bacteria 2237
151 Ga0501043_0142235 3300049579 Bacteria 1878
152 Ga0501043_0208911 3300049579 Bacteria 1513
153 Ga0501046_0080263 3300049580 Bacteria 2521
154 Ga0501047_0026723 3300049581 Bacteria 5555
155 Ga0501047_0029513 3300049581 Bacteria 5287
156 Ga0501047_0036891 3300049581 Bacteria 4724
157 Ga0501047_0063867 3300049581 Bacteria 3551
158 Ga0501048_0011790 3300049582 Bacteria 6515
159 Ga0501070_0035914 3300049586 Bacteria 4139
160 Ga0501070_0132256 3300049586 Bacteria 2061
161 Ga0501070_0171972 3300049586 Bacteria 1784
162 Ga0501074_0138027 3300049590 Bacteria 1744
163 Ga0501080_0016723 3300049742 Bacteria 6773
164 Ga0501080_0094852 3300049742 Bacteria 2771
165 Ga0501080_0297610 3300049742 Bacteria 1464
166 Ga0501035_0032035 3300049822 Bacteria 4786
167 Ga0501035_0035101 3300049822 Bacteria 4553
168 Ga0501035_0044998 3300049822 Bacteria 3972
169 Ga0501035_0050705 3300049822 Bacteria 3718
170 Ga0501035_0187700 3300049822 Bacteria 1778
171 Ga0501044_0015884 3300049823 Bacteria 8102
172 Ga0501044_0038839 3300049823 Bacteria 4971
173 Ga0501044_0083485 3300049823 Bacteria 3230
174 Ga0501044_0084215 3300049823 Bacteria 3214
175 Ga0501044_0121102 3300049823 Bacteria 2617
176 Ga0501082_0036080 3300060353 Bacteria 4260
177 2538833895 2537561836 Bacteria 3910579
178 2547697627 2547132181 Bacteria 4945084
179 2562466270 2561511199 Bacteria 5155034
180 2572253631 2571042365 Bacteria 3289345
181 2643831768 2643221562 Bacteria 4048635
182 2687584902 2687453130 Bacteria 4227172
183 2792313692 2791355010 Bacteria 4864581
184 2863074992 2863067949 Bacteria 8541735
185 2895396253 2895395659 Bacteria 3983269
186 2939615443 2939611941 Bacteria 3892017
187 8002870156 8002869464 Bacteria 3588529
188 Ga0105241_10041044
189 JGI25162J39368_1001193
190 JGI25157J39369_1000425
191 JGI25157J39369_1004025
192 JGI25165J46597_1000379
193 Ga0070658_10212032
194 Ga0070680_100296856
195 Ga0070682_100004557
196 Ga0070661_100035604
197 Ga0070671_100101826
198 Ga0070671_100233606
199 Ga0070674_100112197
200 Ga0070659_100043600
201 Ga0070659_100044900
202 Ga0070714_100000209
203 Ga0070714_100005590
204 Ga0070714_100008554
205 Ga0070713_100020822
206 Ga0070710_10017486
207 Ga0070662_100095427
208 Ga0070681_10012143
209 Ga0070681_10027614
210 Ga0070679_100120311
211 Ga0070679_100238243
212 Ga0070679_100303992
213 Ga0068853_100264090
214 Ga0070672_100002084
215 Ga0070696_100190714
216 Ga0070693_100056956
217 Ga0068855_100012611
218 Ga0068855_100155319
219 Ga0068856_100045373
220 Ga0068856_100054243
221 Ga0105240_10007745
222 Ga0105240_10119051
223 Ga0105245_10082060
224 Ga0105245_10217986
225 Ga0105248_10032196
226 Ga0105237_10001315
227 Ga0105237_10038793
228 Ga0105237_10181762
229 Ga0105238_10013663
230 Ga0105238_10022760
231 Ga0105238_10085067
232 Ga0105238_10282288
233 Ga0157373_10004598
234 Ga0157373_10171598
235 Ga0157371_10010207
236 Ga0157371_10043158
237 Ga0157371_10044215
238 Ga0157371_10050890
239 Ga0157370_10004714
240 Ga0157370_10037206
241 Ga0157370_10042054
242 Ga0157369_10087506
243 Ga0157369_10204851
244 Ga0157372_10358908
245 Ga0157375_10030411
246 Ga0182008_10023534
247 Ga0157376_10203332
248 Ga0182006_1063127
249 Ga0183369_1021
250 Ga0206356_10908469
251 Ga0206353_10966223
252 Ga0207427_100101
253 Ga0209437_100090
254 Ga0209646_1002620
255 Ga0209026_1000114
256 Ga0209026_1002707
257 Ga0209233_1000077
258 Ga0209455_1000254
259 Ga0207692_10014320
260 Ga0207647_10002201
261 Ga0207705_10040724
262 Ga0207695_10001324
263 Ga0207695_10023803
264 Ga0207671_10000462
265 Ga0207671_10062077
266 Ga0207657_10041098
267 Ga0207657_10063773
268 Ga0207694_10012417
269 Ga0207650_10092536
270 Ga0207650_10092636
271 Ga0207700_10006738
272 Ga0207664_10000135
273 Ga0207664_10001594
274 Ga0207664_10008842
275 Ga0207690_10003605
276 Ga0207690_10004321
277 Ga0207691_10006611
278 Ga0207711_10029222
279 Ga0207667_10011114
280 Ga0207667_10058212
281 Ga0207651_10133006
282 Ga0207678_10004437
283 Ga0207678_10071416
284 Ga0207702_10028099
285 Ga0207674_10027147
286 Ga0209969_1005416
287 Ga0209995_1002795
288 Ga0209999_1003745
289 Ga0209982_1004144
290 Ga0209970_1012790
291 Ga0209983_1002186
292 Ga0209971_1000369
293 Ga0209974_10008821
294 Ga0307413_10010888
295 Ga0307413_10013081
296 Ga0307410_10130252
297 Ga0307414_10013087
298 Ga0307414_10109868
299 Ga0307414_10194545
300 Ga0307411_10014673
301 Ga0395899_0037937
302 Ga0395900_0036456
303 Ga0395898_0011640
304 Ga0395898_0405864
305 Ga0395905_0176508
306 Ga0395901_0001304
307 Ga0395901_0054560
308 Ga0395901_0090477
309 Ga0451791_0103606
310 Ga0451807_1184891
311 Ga0451837_1096112
312 Ga0439448_0015960
313 Ga0439432_007154
314 Ga0495663_0026931
315 Ga0495621_0000271
316 Ga0495656_0005419
317 Ga0495668_0036679
318 Ga0495588_0152981
319 Ga0495658_0103480
320 Ga0495636_0001671
321 Ga0495636_0013556
322 Ga0496113_0012884
323 Ga0496119_0001155
324 Ga0501031_0069164
325 Ga0501032_0003364
326 Ga0501033_0001210
327 Ga0501033_0012617
328 Ga0501034_0000544
329 Ga0501034_0002057
330 Ga0501034_0010411
331 Ga0501036_0018668
332 Ga0501036_0137522
333 Ga0501037_0011730
334 Ga0501039_0027973
335 Ga0501039_0165377
336 Ga0501043_0038714
337 Ga0501043_0103509
338 Ga0501043_0142235
339 Ga0501043_0208911
340 Ga0501046_0080263
341 Ga0501047_0026723
342 Ga0501047_0029513
343 Ga0501047_0036891
344 Ga0501047_0063867
345 Ga0501048_0011790
346 Ga0501070_0035914
347 Ga0501070_0132256
348 Ga0501070_0171972
349 Ga0501074_0138027
350 Ga0501080_0016723
351 Ga0501080_0094852
352 Ga0501080_0297610
353 Ga0501035_0032035
354 Ga0501035_0035101
355 Ga0501035_0044998
356 Ga0501035_0050705
357 Ga0501035_0187700
358 Ga0501044_0015884
359 Ga0501044_0038839
360 Ga0501044_0083485
361 Ga0501044_0084215
362 Ga0501044_0121102
363 Ga0501082_0036080
364 2538833895
365 2547697627
366 2562466270
367 2572253631
368 2643831768
369 2687584902
370 2792313692
371 2863074992
372 2895396253
373 2939615443
374 8002870156

MSA Aligner

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00291

PALP

Pyridoxal-phosphate dependent enzyme

53

347

0.88

Structural Annotation

Top 5 Hits

ID Description Score Start End
1o58-assembly1.cif.gz_C crystal structure of o-acetylserine sulfhydrylase (tm0665) from thermotoga maritima at 1.80 a resolution 0.8906 28 333
5i7a-assembly1.cif.gz_A mycobacterium tuberculosis cysm in complex with the urea-scaffold inhibitor 1 [3-(3-(3,4-dichlorophenyl)ureido)benzoic acid] 0.8861 29 333
5i6d-assembly1.cif.gz_A mycobacterium tuberculosis cysm in complex with the urea-scaffold inhibitor 5 [3-(3-(p-tolyl)ureido) benzoic acid] 0.8857 29 333
5i7o-assembly1.cif.gz_A mycobacterium tuberculosis cysm in complex with the urea-scaffold inhibitor 7 [3-(3-(4-chlorophenyl)ureido)benzoic acid] 0.8827 29 333
5i6d-assembly1.cif.gz_B mycobacterium tuberculosis cysm in complex with the urea-scaffold inhibitor 5 [3-(3-(p-tolyl)ureido) benzoic acid] 0.8816 29 333
ID Description Score Start End Superfamily
af_O69652_166_314_3.40.50.1100 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.9712 186 332 3.40.50.1100
af_O69652_166_314_3.40.50.1100 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.9521 186 332 3.40.50.1100
af_Q965I8_90_187_3.40.50.1100 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.9451 61 157 3.40.50.1100
af_G5EF21_87_180_3.40.50.1100 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.9436 64 154 3.40.50.1100
3dkiB01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.9376 177 334 3.40.50.1100
ID Description Score Start End GO Terms
AF-A0A6G8NTJ6-F1-model_v4 Cysteine synthase 0.9721 273 359
AF-A0A6B3EEZ6-F1-model_v4 PLP-dependent cysteine synthase family protein 0.9696 229 344
AF-A0A485DAR8-F1-model_v4 L-cysteine desulfhydrase Cds1 (EC 4.4.1.1) 0.9656 18 344 GO:0004124
GO:0005737
GO:0019450
GO:0030170
GO:0080146
AF-A0A4P2VK11-F1-model_v4 L-cysteine desulfhydrase Cds1 (EC 4.4.1.1) 0.9621 17 359 GO:0005737
GO:0016829
GO:0019450
GO:0030170
AF-A0A209A193-F1-model_v4 L-cysteine desulfhydrase Cds1 (EC 4.4.1.1) 0.962 18 357 GO:0005737
GO:0016829
GO:0019450
GO:0030170

Map