F284676

General Info

Members Datasets Scaffolds Average Seq Length
185 158 370 214

Family's Representative Sequence

Representative Sequence 3300037418|Ga0395900_0298610|Ga0395900_0298610_645_1367
Length 240
Sequence MQIECAGRRAFYSSRANQEIAMSVTPILTAFERSPDRGRGLARDMRVRWALEEVGQPYEVRLLSFDAMKQPGHRALNPFGQIPTYEDGDLTLFESGAIVLHIAERHAGLLPLEANARSRAIMWMFAALNTVEPPVFDRTIALIVEGKEPWAQERLALVEERIRKRLAELAAHLGDADWLDGGFSAGDLLMVTVLRRLTGSGLLEEQPGLMDYIARAEARPAYQRAFEAQLAVFNANSNKQ

Samples

Sample ID Description Type Environment
1 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
2 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
3 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
4 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
5 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
6 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
7 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
8 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
9 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
10 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
11 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
12 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
13 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
14 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
15 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
16 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
17 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
18 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
19 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
20 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
21 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
22 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
23 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
24 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
25 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
26 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
27 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
28 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
29 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
30 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
31 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
32 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
33 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
34 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
35 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
36 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
37 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
38 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
39 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
40 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
41 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
42 3300022739 Root nodule microbial communities from Medicago polymorpha collected in Santa Monica, California, United States - brown nodules Metagenome Nodule
43 3300022740 Root nodule microbial communities from Medicago polymorpha collected in Santa Monica, California, United States - pink nodules Metagenome Nodule
44 3300025208 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
45 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
46 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
47 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
67 3300027666 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 (SPAdes) (version 2) Metagenome Nodule
68 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300031967 Medicago polymorpha root nodule microbial communities from Los Angeles, California, United States - elongated nodules Metagenome Nodule
70 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
71 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
72 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
73 3300033430 Medicago polymorpha root nodule microbial communities from Los Angeles, California, United States - small nodules Metagenome Nodule
74 3300033464 Medicago polymorpha root nodule microbial communities from Los Angeles, California, United States - branched nodules Metagenome Nodule
75 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
76 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
77 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
78 3300041451 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_3 MetaG Metagenome Rhizoplane
79 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
80 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
81 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
82 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
83 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
84 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
85 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
86 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
87 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
88 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
89 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
90 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
91 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
92 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
93 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
94 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
95 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
96 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
97 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
98 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
99 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
100 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
101 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
102 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
103 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
104 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
105 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
106 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
107 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
108 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
109 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
110 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
111 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
112 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
113 3300049679 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_B_3_drought Metagenome Rhizosphere
114 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
115 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
116 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
117 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
118 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
119 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
120 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
121 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
122 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
123 3300059426 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 11_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
124 2511231028 Bradyrhizobium sp. YR681 Isolate Rhizosphere
125 2512875026 Sinorhizobium medicae WSM1115 Isolate Nodule
126 2513237089 Sinorhizobium medicae DI28 Isolate Nodule
127 2513237160 Sinorhizobium medicae WSM244 Isolate Nodule
128 2802428858 Sinorhizobium medicae M14-1 Isolate Nodule
129 2802428859 Sinorhizobium medicae SF3.41 Isolate Nodule
130 2802428860 Sinorhizobium medicae M19-1 Isolate Nodule
131 2802428861 Sinorhizobium medicae USDA1037 Isolate Nodule
132 2802428862 Sinorhizobium medicae M7-4 Isolate Nodule
133 2802428863 Sinorhizobium medicae M26-2 Isolate Nodule
134 2895511927 Pseudoxanthomonas sp. SGD-5-1 Isolate Rhizosphere
135 2915980308 Sinorhizobium medicae USDA1149 Isolate Nodule
136 2916061851 Sinorhizobium medicae USDA1638 Isolate Nodule
137 2921250672 Sinorhizobium medicae USDA1169 Isolate Nodule
138 2935616580 Bradyrhizobium sp. RT7a Isolate Nodule
139 2935855204 Bradyrhizobium sp. RT7b Isolate Nodule
140 2935864058 Bradyrhizobium sp. RT9a Isolate Nodule
141 2935873716 Bradyrhizobium sp. RT9b Isolate Nodule
142 2937029754 Sinorhizobium medicae USDA1624 Isolate Nodule
143 2937036028 Sinorhizobium medicae USDA1608 Isolate Nodule
144 2937078374 Sinorhizobium medicae USDA1004 Isolate Nodule
145 2957375807 Sinorhizobium medicae USDA1632 Isolate Nodule
146 2957437181 Sinorhizobium medicae USDA1694 Isolate Nodule
147 2960591022 Sinorhizobium medicae USDA1066 Isolate Nodule
148 2960631154 Sinorhizobium medicae USDA1629 Isolate Nodule
149 2960680706 Sinorhizobium medicae USDA1150 Isolate Nodule
150 2960693952 Sinorhizobium medicae USDA1630 Isolate Nodule
151 2967686174 Sinorhizobium medicae USDA1641 Isolate Nodule
152 2967728569 Sinorhizobium medicae USDA1607 Isolate Nodule
153 2970122695 Sinorhizobium medicae 3082 Isolate Nodule
154 2970143518 Sinorhizobium medicae USDA1652 Isolate Nodule
155 2977530762 Sinorhizobium medicae USDA1606 Isolate Nodule
156 2977544691 Sinorhizobium medicae USDA1631 Isolate Nodule
157 3005452660 Rhizobium grahamii BG7 Isolate Unclassified
158 8003999396 Sinorhizobium medicae WSM1115 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 80.54
Metatranscriptomes 0.54
Isolates 18.92

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 6.49
Nodule 21.08
Rhizoplane 2.7
Rhizosphere 66.49
Stem 0
Stem Tuber 0
Unclassified 0.54

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0395900_0298610 3300037418 Bacteria 1598
2 Ga0065165_1004293 3300005262 Bacteria 8980
3 Ga0065165_1005222 3300005262 Bacteria 7460
4 Ga0065707_10092654 3300005295 Bacteria 3738
5 Ga0070670_100030041 3300005331 Bacteria 4679
6 Ga0070670_100459132 3300005331 Bacteria 1129
7 Ga0070680_100005674 3300005336 Bacteria 9465
8 Ga0070680_100108611 3300005336 Bacteria 2308
9 Ga0070682_100172045 3300005337 Bacteria 1506
10 Ga0070660_100118183 3300005339 Bacteria 2114
11 Ga0070691_10164434 3300005341 Bacteria 1146
12 Ga0070668_100000820 3300005347 Bacteria 21417
13 Ga0070668_100173627 3300005347 Bacteria 1756
14 Ga0070675_100262053 3300005354 Bacteria 1515
15 Ga0070671_100706485 3300005355 Bacteria 875
16 Ga0070659_100002203 3300005366 Bacteria 13857
17 Ga0070667_100006437 3300005367 Bacteria 9760
18 Ga0070663_100215652 3300005455 Bacteria 1505
19 Ga0070662_100055061 3300005457 Bacteria 2885
20 Ga0070681_10073220 3300005458 Bacteria 3388
21 Ga0070679_100003043 3300005530 Bacteria 15320
22 Ga0068853_100027086 3300005539 Bacteria 4817
23 Ga0070672_100630623 3300005543 Bacteria 935
24 Ga0070665_100000300 3300005548 Bacteria 77545
25 Ga0070665_100084971 3300005548 Bacteria 3170
26 Ga0068855_100005813 3300005563 Bacteria 15052
27 Ga0068855_100024478 3300005563 Bacteria 7222
28 Ga0070664_100023734 3300005564 Bacteria 5065
29 Ga0068857_100132672 3300005577 Bacteria 2247
30 Ga0068854_100002620 3300005578 Bacteria 11153
31 Ga0068852_100176887 3300005616 Bacteria 2004
32 Ga0068864_100414524 3300005618 Bacteria 1282
33 Ga0068863_101052980 3300005841 Bacteria 817
34 Ga0075366_10216254 3300006195 Bacteria 1167
35 Ga0075370_10001573 3300006353 Bacteria 10033
36 Ga0105240_10010384 3300009093 Bacteria 13094
37 Ga0105248_10156793 3300009177 Bacteria 2569
38 Ga0105237_10036955 3300009545 Bacteria 4938
39 Ga0105237_10289082 3300009545 Bacteria 1642
40 Ga0105238_10002215 3300009551 Bacteria 19607
41 Ga0105238_10323611 3300009551 Bacteria 1528
42 Ga0105249_10026772 3300009553 Bacteria 5200
43 Ga0105249_10068464 3300009553 Bacteria 3274
44 Ga0157370_10070046 3300013104 Bacteria 3311
45 Ga0157370_10074913 3300013104 Bacteria 3192
46 Ga0157369_10005865 3300013105 Bacteria 14269
47 Ga0157369_10051357 3300013105 Bacteria 4462
48 Ga0157375_10963887 3300013308 Bacteria 994
49 Ga0163163_10520381 3300014325 Bacteria 1252
50 Ga0163161_10966718 3300017792 Bacteria 725
51 Ga0206353_11840601 3300020082 Unclassified 1028
52 Ga0213872_10010138 3300021361 Bacteria 4494
53 Ga0228711_1010587 3300022739 Bacteria 12067
54 Ga0228710_1016203 3300022740 Bacteria 7869
55 Ga0209436_113166 3300025208 Bacteria 1365
56 Ga0209130_1000841 3300025284 Bacteria 25694
57 Ga0209025_1009353 3300025294 Bacteria 6850
58 Ga0207707_10001788 3300025912 Bacteria 19735
59 Ga0207707_10040106 3300025912 Bacteria 4091
60 Ga0207695_10002916 3300025913 Bacteria 24741
61 Ga0207695_10004614 3300025913 Bacteria 18683
62 Ga0207695_10223715 3300025913 Bacteria 1789
63 Ga0207671_10131100 3300025914 Bacteria 1924
64 Ga0207671_10252246 3300025914 Bacteria 1387
65 Ga0207660_10009275 3300025917 Bacteria 6370
66 Ga0207660_10128135 3300025917 Bacteria 1929
67 Ga0207657_10001673 3300025919 Bacteria 23919
68 Ga0207649_10481414 3300025920 Bacteria 941
69 Ga0207652_10008171 3300025921 Bacteria 8404
70 Ga0207652_10064425 3300025921 Bacteria 3171
71 Ga0207694_10823465 3300025924 Bacteria 784
72 Ga0207644_10069870 3300025931 Bacteria 2565
73 Ga0207690_10004175 3300025932 Bacteria 8533
74 Ga0207690_10027633 3300025932 Bacteria 3587
75 Ga0207706_10029781 3300025933 Bacteria 4871
76 Ga0207711_10095686 3300025941 Bacteria 2620
77 Ga0207667_10004678 3300025949 Bacteria 16759
78 Ga0207667_10210027 3300025949 Bacteria 1995
79 Ga0207712_10116197 3300025961 Bacteria 2015
80 Ga0207668_10000288 3300025972 Bacteria 33102
81 Ga0207668_10181777 3300025972 Bacteria 1659
82 Ga0207668_11145800 3300025972 Bacteria 698
83 Ga0207640_10001181 3300025981 Bacteria 14279
84 Ga0207658_10006506 3300025986 Bacteria 7976
85 Ga0207674_10152871 3300026116 Bacteria 2264
86 Ga0207674_10901825 3300026116 Bacteria 852
87 Ga0207698_10320384 3300026142 Bacteria 1452
88 Ga0207698_10570768 3300026142 Bacteria 1112
89 Ga0209281_1001297 3300027111 Bacteria 15992
90 Ga0209282_1000754 3300027666 Bacteria 16331
91 Ga0268266_10001512 3300028379 Bacteria 27338
92 Ga0268266_10065012 3300028379 Bacteria 3153
93 Ga0315914_1010385 3300031967 Bacteria 11600
94 Ga0307409_100239082 3300031995 Bacteria 1652
95 Ga0307414_10023819 3300032004 Bacteria 3891
96 Ga0307414_10097390 3300032004 Bacteria 2204
97 Ga0307411_10521425 3300032005 Bacteria 1009
98 Ga0315913_1026874 3300033430 Bacteria 4524
99 Ga0315915_1004904 3300033464 Bacteria 16756
100 Ga0395905_0251209 3300037471 Bacteria 1652
101 Ga0395905_0641455 3300037471 Bacteria 964
102 Ga0436360_1233317 3300039438 Bacteria 2358
103 Ga0436361_0105353 3300039447 Bacteria 1392
104 Ga0451791_0425912 3300041451 Bacteria 7355
105 Ga0451807_0274126 3300041486 Bacteria 1275
106 Ga0466961_0180263 3300044693 Bacteria 1312
107 Ga0466959_0095818 3300045049 Bacteria 2128
108 Ga0495590_0001871 3300046457 Bacteria 8900
109 Ga0495629_0313014 3300046459 Bacteria 1074
110 Ga0495653_0002485 3300046463 Bacteria 14669
111 Ga0495650_0051805 3300046471 Bacteria 1689
112 Ga0495582_0004813 3300046473 Bacteria 7575
113 Ga0495639_0194594 3300046475 Bacteria 991
114 Ga0495594_0102184 3300046499 Bacteria 1612
115 Ga0495666_0006863 3300046526 Bacteria 5717
116 Ga0495665_0075886 3300046531 Bacteria 1769
117 Ga0495586_0036583 3300046535 Bacteria 2635
118 Ga0495587_0141263 3300046536 Bacteria 1374
119 Ga0495587_0143012 3300046536 Bacteria 1364
120 Ga0495668_0233952 3300046616 Bacteria 1006
121 Ga0495661_0202951 3300046665 Bacteria 1037
122 Ga0495624_0132892 3300046690 Bacteria 1526
123 Ga0495600_0107193 3300046809 Bacteria 1820
124 Ga0495604_0100503 3300047317 Bacteria 2126
125 Ga0495674_0351913 3300047319 Bacteria 1196
126 Ga0495675_0023122 3300047444 Bacteria 3961
127 Ga0495673_0003688 3300047469 Bacteria 9981
128 Ga0495686_0045696 3300047472 Bacteria 2770
129 Ga0495602_0005871 3300048088 Bacteria 12886
130 Ga0496107_0301529 3300048910 Bacteria 1192
131 Ga0496109_0006190 3300048912 Bacteria 10059
132 Ga0496110_0204150 3300048913 Bacteria 1796
133 Ga0496118_0114894 3300048921 Bacteria 1774
134 Ga0496119_0001340 3300048922 Bacteria 30138
135 Ga0496120_0000226 3300048923 Bacteria 96713
136 Ga0496124_0415280 3300048927 Bacteria 929
137 Ga0496125_0157657 3300048928 Bacteria 1547
138 Ga0501069_0238588 3300049585 Bacteria 1059
139 Ga0501074_0123956 3300049590 Bacteria 1848
140 Ga0501249_022211 3300049679 Bacteria 1388
141 Ga0501225_0003236 3300049705 Bacteria 4970
142 Ga0501080_0805993 3300049742 Bacteria 823
143 Ga0501083_0427363 3300049744 Bacteria 862
144 nmdc:mga00v17_217921_c1 3300050491 Bacteria 1235
145 nmdc:mga0k408_59787_c1 3300050493 Bacteria 2214
146 nmdc:mga07m45_105_c1 3300050496 Bacteria 33210
147 nmdc:mga08y16_1422945_c1 3300050511 Bacteria 656
148 Ga0500556_0071987 3300053104 Bacteria 1293
149 Ga0500594_0013706 3300053118 Bacteria 1930
150 Ga0590077_007651 3300059426 Bacteria 2208
151 2511399115 2511231028 Bacteria 8046582
152 2512969336 2512875026 Bacteria 6861065
153 2513605294 2513237089 Bacteria 6553624
154 2514007208 2513237160 Bacteria 6650282
155 2802720443 2802428858 Bacteria 6636079
156 2802727717 2802428859 Bacteria 6667919
157 2802732819 2802428860 Bacteria 6525526
158 2802739983 2802428861 Bacteria 6534206
159 2802747696 2802428862 Bacteria 6633353
160 2802752604 2802428863 Bacteria 6410669
161 2895513103 2895511927 Bacteria 6802080
162 2915986421 2915980308 Bacteria 6624279
163 2916067607 2916061851 Bacteria 6737736
164 2921253336 2921250672 Bacteria 6677771
165 2935620922 2935616580 Bacteria 9032984
166 2935858730 2935855204 Bacteria 9035059
167 2935866848 2935864058 Bacteria 9784707
168 2935876979 2935873716 Bacteria 9632195
169 2937030671 2937029754 Bacteria 6424026
170 2937040288 2937036028 Bacteria 6846469
171 2937080986 2937078374 Bacteria 6610289
172 2957378256 2957375807 Bacteria 6425588
173 2957439364 2957437181 Bacteria 6568994
174 2960593551 2960591022 Bacteria 6622873
175 2960637001 2960631154 Bacteria 6732508
176 2960683666 2960680706 Bacteria 6624464
177 2960694610 2960693952 Bacteria 6749742
178 2967691801 2967686174 Bacteria 6678622
179 2967732610 2967728569 Bacteria 6641507
180 2970123548 2970122695 Bacteria 6625855
181 2970149532 2970143518 Bacteria 6446480
182 2977536751 2977530762 Bacteria 6951399
183 2977547597 2977544691 Bacteria 6875412
184 3005457614 3005452660 Bacteria 5889319
185 8004004378 8003999396 Bacteria 7063185
186 Ga0395900_0298610
187 Ga0065165_1004293
188 Ga0065165_1005222
189 Ga0065707_10092654
190 Ga0070670_100030041
191 Ga0070670_100459132
192 Ga0070680_100005674
193 Ga0070680_100108611
194 Ga0070682_100172045
195 Ga0070660_100118183
196 Ga0070691_10164434
197 Ga0070668_100000820
198 Ga0070668_100173627
199 Ga0070675_100262053
200 Ga0070671_100706485
201 Ga0070659_100002203
202 Ga0070667_100006437
203 Ga0070663_100215652
204 Ga0070662_100055061
205 Ga0070681_10073220
206 Ga0070679_100003043
207 Ga0068853_100027086
208 Ga0070672_100630623
209 Ga0070665_100000300
210 Ga0070665_100084971
211 Ga0068855_100005813
212 Ga0068855_100024478
213 Ga0070664_100023734
214 Ga0068857_100132672
215 Ga0068854_100002620
216 Ga0068852_100176887
217 Ga0068864_100414524
218 Ga0068863_101052980
219 Ga0075366_10216254
220 Ga0075370_10001573
221 Ga0105240_10010384
222 Ga0105248_10156793
223 Ga0105237_10036955
224 Ga0105237_10289082
225 Ga0105238_10002215
226 Ga0105238_10323611
227 Ga0105249_10026772
228 Ga0105249_10068464
229 Ga0157370_10070046
230 Ga0157370_10074913
231 Ga0157369_10005865
232 Ga0157369_10051357
233 Ga0157375_10963887
234 Ga0163163_10520381
235 Ga0163161_10966718
236 Ga0206353_11840601
237 Ga0213872_10010138
238 Ga0228711_1010587
239 Ga0228710_1016203
240 Ga0209436_113166
241 Ga0209130_1000841
242 Ga0209025_1009353
243 Ga0207707_10001788
244 Ga0207707_10040106
245 Ga0207695_10002916
246 Ga0207695_10004614
247 Ga0207695_10223715
248 Ga0207671_10131100
249 Ga0207671_10252246
250 Ga0207660_10009275
251 Ga0207660_10128135
252 Ga0207657_10001673
253 Ga0207649_10481414
254 Ga0207652_10008171
255 Ga0207652_10064425
256 Ga0207694_10823465
257 Ga0207644_10069870
258 Ga0207690_10004175
259 Ga0207690_10027633
260 Ga0207706_10029781
261 Ga0207711_10095686
262 Ga0207667_10004678
263 Ga0207667_10210027
264 Ga0207712_10116197
265 Ga0207668_10000288
266 Ga0207668_10181777
267 Ga0207668_11145800
268 Ga0207640_10001181
269 Ga0207658_10006506
270 Ga0207674_10152871
271 Ga0207674_10901825
272 Ga0207698_10320384
273 Ga0207698_10570768
274 Ga0209281_1001297
275 Ga0209282_1000754
276 Ga0268266_10001512
277 Ga0268266_10065012
278 Ga0315914_1010385
279 Ga0307409_100239082
280 Ga0307414_10023819
281 Ga0307414_10097390
282 Ga0307411_10521425
283 Ga0315913_1026874
284 Ga0315915_1004904
285 Ga0395905_0251209
286 Ga0395905_0641455
287 Ga0436360_1233317
288 Ga0436361_0105353
289 Ga0451791_0425912
290 Ga0451807_0274126
291 Ga0466961_0180263
292 Ga0466959_0095818
293 Ga0495590_0001871
294 Ga0495629_0313014
295 Ga0495653_0002485
296 Ga0495650_0051805
297 Ga0495582_0004813
298 Ga0495639_0194594
299 Ga0495594_0102184
300 Ga0495666_0006863
301 Ga0495665_0075886
302 Ga0495586_0036583
303 Ga0495587_0141263
304 Ga0495587_0143012
305 Ga0495668_0233952
306 Ga0495661_0202951
307 Ga0495624_0132892
308 Ga0495600_0107193
309 Ga0495604_0100503
310 Ga0495674_0351913
311 Ga0495675_0023122
312 Ga0495673_0003688
313 Ga0495686_0045696
314 Ga0495602_0005871
315 Ga0496107_0301529
316 Ga0496109_0006190
317 Ga0496110_0204150
318 Ga0496118_0114894
319 Ga0496119_0001340
320 Ga0496120_0000226
321 Ga0496124_0415280
322 Ga0496125_0157657
323 Ga0501069_0238588
324 Ga0501074_0123956
325 Ga0501249_022211
326 Ga0501225_0003236
327 Ga0501080_0805993
328 Ga0501083_0427363
329 nmdc:mga00v17_217921_c1
330 nmdc:mga0k408_59787_c1
331 nmdc:mga07m45_105_c1
332 nmdc:mga08y16_1422945_c1
333 Ga0500556_0071987
334 Ga0500594_0013706
335 Ga0590077_007651
336 2511399115
337 2512969336
338 2513605294
339 2514007208
340 2802720443
341 2802727717
342 2802732819
343 2802739983
344 2802747696
345 2802752604
346 2895513103
347 2915986421
348 2916067607
349 2921253336
350 2935620922
351 2935858730
352 2935866848
353 2935876979
354 2937030671
355 2937040288
356 2937080986
357 2957378256
358 2957439364
359 2960593551
360 2960637001
361 2960683666
362 2960694610
363 2967691801
364 2967732610
365 2970123548
366 2970149532
367 2977536751
368 2977547597
369 3005457614
370 8004004378

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02798

GST_N

Glutathione S-transferase, N-terminal domain

37

104

0.92

PF13417

GST_N_3

Glutathione S-transferase, N-terminal domain

44

109

0.92

PF13409

GST_N_2

Glutathione S-transferase, N-terminal domain

45

105

0.89

Structural Annotation

Top 5 Hits

ID Description Score Start End
2ycd-assembly1.cif.gz_A-2 structure of a novel glutathione transferase from agrobacterium tumefaciens. 0.9833 2 211
3lq7-assembly1.cif.gz_B crystal structure of glutathione s-transferase from agrobacterium tumefaciens str. c58 0.9811 1 212
3lq7-assembly1.cif.gz_A crystal structure of glutathione s-transferase from agrobacterium tumefaciens str. c58 0.9774 1 212
3lq7-assembly1.cif.gz_A crystal structure of glutathione s-transferase from agrobacterium tumefaciens str. c58 0.9679 1 212
3lq7-assembly1.cif.gz_B crystal structure of glutathione s-transferase from agrobacterium tumefaciens str. c58 0.9664 1 212
ID Description Score Start End Superfamily
2ycdA02 Mainly Alpha;Up-down Bundle;Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2; 0.9791 88 203 1.20.1050.10
3lq7B02 Mainly Alpha;Up-down Bundle;Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2; 0.9765 88 203 1.20.1050.10
3lq7C02 Mainly Alpha;Up-down Bundle;Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2; 0.9733 88 203 1.20.1050.10
2ycdA01 Alpha Beta;3-Layer(aba) Sandwich;Glutaredoxin;Glutaredoxin 0.9679 2 87 3.40.30.10
2ycdA02 Mainly Alpha;Up-down Bundle;Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2; 0.9628 88 203 1.20.1050.10
ID Description Score Start End GO Terms
AF-J7QHL1-F1-model_v4 Glutathione S-transferase domain protein 0.9986 23 215
AF-A0A087N7W3-F1-model_v4 Glutathione S-transferase 0.9985 29 213
AF-A0A534EIW3-F1-model_v4 Glutathione S-transferase family protein 0.9953 50 212 GO:0016740
AF-A0A7Y4T7F7-F1-model_v4 Glutathione S-transferase family protein 0.9952 59 212 GO:0016740
AF-A0A7W6WI89-F1-model_v4 Glutathione S-transferase (EC 2.5.1.18) 0.9928 1 210 GO:0004364

Map