F283284
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 184 | 150 | 168 | 235 |
Family's Representative Sequence
| Representative Sequence | 3300049572|Ga0501036_0114302|Ga0501036_0114302_1200_1991 |
| Length | 263 |
| Sequence | MKGNIVILTGAGISAESGVPTFRASDGLWCGHRVEDVATPEGFRANPDLVQDFYNQRRRQLREVAPNAAHHALARLAAEWPNEVLLVTQNVDDLHDRARLAVEQGLPSAQAGVGDVSPPPRRHERSELAVRDKNELIHMHGELLKSRCTRTGQVCTWSEDILPDTVSPFHPDATLRPHIVWFGEMPLRMDRIEQALGDCALFISIGTSGNVYPAAGFVSAARHAGAHTVELNLEPSLGQNLFHEHHYGPATQVVPEFVERLLA |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 2643221566 | Microbacterium sp. Root166 | Isolate | Unclassified |
| 2 | 2643221574 | Brevundimonas sp. Root608 | Isolate | Unclassified |
| 3 | 2643221597 | Microbacterium sp. Root180 | Isolate | Unclassified |
| 4 | 2643221663 | Brevundimonas sp. Root1279 | Isolate | Unclassified |
| 5 | 2643221699 | Brevundimonas sp. Root1423 | Isolate | Unclassified |
| 6 | 2739367756 | Asticcacaulis sp. CF398 | Isolate | Unclassified |
| 7 | 2773857763 | Microbacterium sp. SAI-030 | Isolate | Unclassified |
| 8 | 2808606306 | Microbacterium sp. SLBN-146 | Isolate | Unclassified |
| 9 | 2811994872 | Microbacterium sp. MU4Y-5-1 | Isolate | Unclassified |
| 10 | 2821268502 | Microbacterium sp. YT0620BN | Isolate | Unclassified |
| 11 | 2833709550 | Microbacterium sp. 3290 | Isolate | Rhizosphere |
| 12 | 2928972540 | Brevundimonas sp. 1080 | Isolate | Rhizosphere |
| 13 | 2941485952 | Brevundimonas faecalis 2814 | Isolate | Rhizosphere |
| 14 | 2977240413 | Brevundimonas vesicularis SORGH_AS 431 | Isolate | Unclassified |
| 15 | 3300002459 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6 | Metagenome | Rhizosphere |
| 16 | 3300003320 | Sugarcane root Sample H2 | Metagenome | Unclassified |
| 17 | 3300003322 | Sugarcane root Sample L2 | Metagenome | Unclassified |
| 18 | 3300003323 | Sugarcane root Sample H1 | Metagenome | Unclassified |
| 19 | 3300003578 | Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) | Metatranscriptome | Unclassified |
| 20 | 3300003781 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 | Metagenome | Endosphere |
| 21 | 3300003794 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 | Metagenome | Endosphere |
| 22 | 3300005295 | Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) | Metagenome | Rhizosphere |
| 23 | 3300005331 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG | Metagenome | Rhizosphere |
| 24 | 3300005335 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG | Metagenome | Rhizosphere |
| 25 | 3300005337 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG | Metagenome | Rhizosphere |
| 26 | 3300005338 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 | Metagenome | Rhizosphere |
| 27 | 3300005345 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG | Metagenome | Rhizosphere |
| 28 | 3300005347 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG | Metagenome | Rhizosphere |
| 29 | 3300005353 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG | Metagenome | Rhizosphere |
| 30 | 3300005354 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG | Metagenome | Rhizosphere |
| 31 | 3300005355 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG | Metagenome | Rhizosphere |
| 32 | 3300005366 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG | Metagenome | Rhizosphere |
| 33 | 3300005367 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG | Metagenome | Rhizosphere |
| 34 | 3300005438 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG | Metagenome | Rhizosphere |
| 35 | 3300005441 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG | Metagenome | Rhizosphere |
| 36 | 3300005455 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG | Metagenome | Rhizosphere |
| 37 | 3300005459 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 | Metagenome | Rhizosphere |
| 38 | 3300005539 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 | Metagenome | Rhizosphere |
| 39 | 3300005548 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG | Metagenome | Rhizosphere |
| 40 | 3300005578 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 | Metagenome | Rhizosphere |
| 41 | 3300005615 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG | Metagenome | Rhizosphere |
| 42 | 3300005616 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 | Metagenome | Rhizosphere |
| 43 | 3300005617 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 | Metagenome | Rhizosphere |
| 44 | 3300005719 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 | Metagenome | Rhizosphere |
| 45 | 3300005840 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 | Metagenome | Rhizosphere |
| 46 | 3300005841 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 | Metagenome | Rhizosphere |
| 47 | 3300005843 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 | Metagenome | Rhizosphere |
| 48 | 3300005844 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 | Metagenome | Rhizosphere |
| 49 | 3300006038 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 | Metagenome | Endosphere |
| 50 | 3300006048 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 | Metagenome | Endosphere |
| 51 | 3300006051 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 | Metagenome | Endosphere |
| 52 | 3300006178 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 | Metagenome | Endosphere |
| 53 | 3300006353 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 | Metagenome | Endosphere |
| 54 | 3300006881 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 | Metagenome | Rhizosphere |
| 55 | 3300006931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 56 | 3300009094 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 57 | 3300009098 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG | Metagenome | Rhizosphere |
| 58 | 3300009177 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG | Metagenome | Rhizosphere |
| 59 | 3300009551 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG | Metagenome | Rhizosphere |
| 60 | 3300009553 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG | Metagenome | Rhizosphere |
| 61 | 3300013102 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG | Metagenome | Rhizosphere |
| 62 | 3300013104 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG | Metagenome | Rhizosphere |
| 63 | 3300013105 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG | Metagenome | Rhizosphere |
| 64 | 3300013308 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG | Metagenome | Rhizosphere |
| 65 | 3300014325 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG | Metagenome | Rhizosphere |
| 66 | 3300014326 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG | Metagenome | Rhizosphere |
| 67 | 3300014745 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG | Metagenome | Rhizosphere |
| 68 | 3300015684 | Plant tissue microbial consortia from sugarcane, Campinas, Sao Paulo, Brazil - 002.2_F02 | Metagenome | Unclassified |
| 69 | 3300015689 | Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_A02 | Metagenome | Rhizosphere |
| 70 | 3300025292 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 71 | 3300025304 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 72 | 3300025903 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 73 | 3300025918 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 74 | 3300025923 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 75 | 3300025925 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 76 | 3300025927 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 77 | 3300025931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 78 | 3300025932 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 79 | 3300025935 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 80 | 3300025938 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 81 | 3300025940 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 82 | 3300025941 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 83 | 3300025944 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 84 | 3300025972 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 85 | 3300025986 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 86 | 3300026035 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 87 | 3300026067 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 88 | 3300026075 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 89 | 3300026088 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 90 | 3300026089 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 91 | 3300026118 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 92 | 3300027617 | Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 S AM (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 93 | 3300028379 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 94 | 3300028381 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 95 | 3300031901 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 | Metagenome | Rhizosphere |
| 96 | 3300031911 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 | Metagenome | Rhizosphere |
| 97 | 3300031995 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 | Metagenome | Rhizosphere |
| 98 | 3300032004 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 | Metagenome | Rhizosphere |
| 99 | 3300037471 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 | Metagenome | Rhizosphere |
| 100 | 3300041486 | Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG | Metagenome | Rhizoplane |
| 101 | 3300042876 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED | Metagenome | Rhizosphere |
| 102 | 3300044656 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R | Metagenome | Rhizosphere |
| 103 | 3300044684 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R | Metagenome | Rhizosphere |
| 104 | 3300044693 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R | Metagenome | Rhizosphere |
| 105 | 3300044712 | Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED | Metagenome | Rhizosphere |
| 106 | 3300044765 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R | Metagenome | Rhizosphere |
| 107 | 3300044842 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R | Metagenome | Rhizosphere |
| 108 | 3300044901 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R | Metagenome | Rhizosphere |
| 109 | 3300045049 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R | Metagenome | Rhizosphere |
| 110 | 3300045051 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED | Metagenome | Rhizosphere |
| 111 | 3300045836 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R | Metagenome | Rhizosphere |
| 112 | 3300046515 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere | Metagenome | Rhizosphere |
| 113 | 3300046558 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere | Metagenome | Rhizosphere |
| 114 | 3300046694 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere | Metagenome | Rhizosphere |
| 115 | 3300047472 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere | Metagenome | Rhizosphere |
| 116 | 3300048090 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co1_10_3 rhizosphere | Metagenome | Rhizosphere |
| 117 | 3300048903 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled | Metagenome | Rhizoplane |
| 118 | 3300048907 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 | Metagenome | Rhizoplane |
| 119 | 3300048908 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 | Metagenome | Rhizoplane |
| 120 | 3300048912 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled | Metagenome | Rhizoplane |
| 121 | 3300048913 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 | Metagenome | Rhizoplane |
| 122 | 3300048914 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 | Metagenome | Rhizoplane |
| 123 | 3300048917 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 | Metagenome | Rhizoplane |
| 124 | 3300048918 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 | Metagenome | Rhizoplane |
| 125 | 3300048919 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled | Metagenome | Unclassified |
| 126 | 3300048924 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 | Metagenome | Unclassified |
| 127 | 3300048925 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled | Metagenome | Unclassified |
| 128 | 3300048928 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 | Metagenome | Unclassified |
| 129 | 3300049571 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 130 | 3300049572 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 131 | 3300049579 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 132 | 3300049583 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 | Metagenome | Rhizosphere |
| 133 | 3300049585 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 | Metagenome | Rhizosphere |
| 134 | 3300049586 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 | Metagenome | Rhizosphere |
| 135 | 3300049590 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 | Metagenome | Rhizosphere |
| 136 | 3300049744 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 | Metagenome | Rhizosphere |
| 137 | 3300049822 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 138 | 3300050491 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation | Metagenome | Endosphere |
| 139 | 3300050492 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation | Metagenome | Endosphere |
| 140 | 3300053080 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere | Metagenome | Endosphere |
| 141 | 3300053088 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere | Metagenome | Endosphere |
| 142 | 3300053093 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere | Metagenome | Endosphere |
| 143 | 3300053116 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 endosphere | Metagenome | Endosphere |
| 144 | 3300053122 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere | Metagenome | Endosphere |
| 145 | 3300053136 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere | Metagenome | Endosphere |
| 146 | 3300053140 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere | Metagenome | Endosphere |
| 147 | 3300060353 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 | Metagenome | Rhizosphere |
| 148 | 3300061719 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 | Metagenome | Rhizosphere |
| 149 | 3300061734 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) | Metagenome | Rhizosphere |
| 150 | 8045830549 | Microbacterium yannicii DSM 23203 | Isolate | Unclassified |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 90.22 |
| Metatranscriptomes | 1.09 |
| Isolates | 8.7 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 10.87 |
| Nodule | 0 |
| Rhizoplane | 5.98 |
| Rhizosphere | 67.93 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 15.22 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | JGI24751J29686_10020293 | 3300002459 | Bacteria | 1376 |
| 2 | rootH2_10069841 | 3300003320 | Bacteria | 4971 |
| 3 | rootH2_10081453 | 3300003320 | Bacteria | 2634 |
| 4 | rootL2_10049270 | 3300003322 | Bacteria | 3101 |
| 5 | rootL2_10049271 | 3300003322 | Bacteria | 1235 |
| 6 | rootL2_10246254 | 3300003322 | Bacteria | 3322 |
| 7 | rootH1_10035577 | 3300003323 | Bacteria | 7096 |
| 8 | rootH1_10075498 | 3300003323 | Bacteria | 1269 |
| 9 | rootH1_10142682 | 3300003323 | Bacteria | 2608 |
| 10 | Ga0006562J51391_1187832 | 3300003578 | Bacteria | 4316 |
| 11 | Ga0006562J51391_1187833 | 3300003578 | Bacteria | 3890 |
| 12 | Ga0055536_1000840 | 3300003781 | Bacteria | 20269 |
| 13 | Ga0055531_10007789 | 3300003794 | Bacteria | 5770 |
| 14 | Ga0065707_10224201 | 3300005295 | Bacteria | 1213 |
| 15 | Ga0070670_100000371 | 3300005331 | Bacteria | 37336 |
| 16 | Ga0070670_100562274 | 3300005331 | Bacteria | 1018 |
| 17 | Ga0070666_10066379 | 3300005335 | Bacteria | 2448 |
| 18 | Ga0070682_100065170 | 3300005337 | Bacteria | 2314 |
| 19 | Ga0068868_100085559 | 3300005338 | Bacteria | 2534 |
| 20 | Ga0070692_10000566 | 3300005345 | Bacteria | 11581 |
| 21 | Ga0070668_100000006 | 3300005347 | Bacteria | 176486 |
| 22 | Ga0070669_100004839 | 3300005353 | Bacteria | 9719 |
| 23 | Ga0070669_100053156 | 3300005353 | Bacteria | 2965 |
| 24 | Ga0070675_100133651 | 3300005354 | Bacteria | 2116 |
| 25 | Ga0070671_100000120 | 3300005355 | Bacteria | 50898 |
| 26 | Ga0070671_100276428 | 3300005355 | Bacteria | 1428 |
| 27 | Ga0070659_100047391 | 3300005366 | Bacteria | 3371 |
| 28 | Ga0070667_100000003 | 3300005367 | Bacteria | 447715 |
| 29 | Ga0070701_10057467 | 3300005438 | Bacteria | 2039 |
| 30 | Ga0070700_100034310 | 3300005441 | Bacteria | 3064 |
| 31 | Ga0070663_100185371 | 3300005455 | Bacteria | 1617 |
| 32 | Ga0070663_100366275 | 3300005455 | Bacteria | 1170 |
| 33 | Ga0068867_100013599 | 3300005459 | Bacteria | 5764 |
| 34 | Ga0068853_100113800 | 3300005539 | Bacteria | 2406 |
| 35 | Ga0070665_100152446 | 3300005548 | Bacteria | 2314 |
| 36 | Ga0068854_100135733 | 3300005578 | Bacteria | 1883 |
| 37 | Ga0070702_100074443 | 3300005615 | Bacteria | 2015 |
| 38 | Ga0068852_100001760 | 3300005616 | Bacteria | 14741 |
| 39 | Ga0068859_100029568 | 3300005617 | Bacteria | 5498 |
| 40 | Ga0068861_100003636 | 3300005719 | Bacteria | 10276 |
| 41 | Ga0068870_10012127 | 3300005840 | Bacteria | 4019 |
| 42 | Ga0068863_100001154 | 3300005841 | Bacteria | 26381 |
| 43 | Ga0068863_100119337 | 3300005841 | Bacteria | 2514 |
| 44 | Ga0068860_100000068 | 3300005843 | Bacteria | 179208 |
| 45 | Ga0068862_100000267 | 3300005844 | Bacteria | 58000 |
| 46 | Ga0075365_10003637 | 3300006038 | Bacteria | 7990 |
| 47 | Ga0075365_10003919 | 3300006038 | Bacteria | 7791 |
| 48 | Ga0075363_100074090 | 3300006048 | Bacteria | 1853 |
| 49 | Ga0075364_10241722 | 3300006051 | Bacteria | 1226 |
| 50 | Ga0075367_10179845 | 3300006178 | Bacteria | 1318 |
| 51 | Ga0075370_10010179 | 3300006353 | Bacteria | 4904 |
| 52 | Ga0068865_100008156 | 3300006881 | Bacteria | 6464 |
| 53 | Ga0097620_100029568 | 3300006931 | Bacteria | 5498 |
| 54 | Ga0111539_10254705 | 3300009094 | Bacteria | 2044 |
| 55 | Ga0105245_10018413 | 3300009098 | Bacteria | 6106 |
| 56 | Ga0105248_10020365 | 3300009177 | Bacteria | 7349 |
| 57 | Ga0105238_10119389 | 3300009551 | Bacteria | 2617 |
| 58 | Ga0105249_10006479 | 3300009553 | Bacteria | 10183 |
| 59 | Ga0157371_10055208 | 3300013102 | Bacteria | 2819 |
| 60 | Ga0157370_10023618 | 3300013104 | Bacteria | 6102 |
| 61 | Ga0157369_10014261 | 3300013105 | Bacteria | 8978 |
| 62 | Ga0157375_10363375 | 3300013308 | Bacteria | 1614 |
| 63 | Ga0163163_10427869 | 3300014325 | Bacteria | 1383 |
| 64 | Ga0157380_10013153 | 3300014326 | Bacteria | 6026 |
| 65 | Ga0157380_10196317 | 3300014326 | Bacteria | 1786 |
| 66 | Ga0157377_10027767 | 3300014745 | Bacteria | 3041 |
| 67 | Ga0183365_10001 | 3300015684 | Bacteria | 2090444 |
| 68 | Ga0183360_11117 | 3300015689 | Bacteria | 894 |
| 69 | Ga0209676_1000082 | 3300025292 | Bacteria | 280400 |
| 70 | Ga0209257_1000459 | 3300025304 | Bacteria | 75629 |
| 71 | Ga0207680_10308808 | 3300025903 | Bacteria | 1104 |
| 72 | Ga0207662_10148867 | 3300025918 | Bacteria | 1488 |
| 73 | Ga0207681_10002686 | 3300025923 | Bacteria | 11265 |
| 74 | Ga0207681_10050777 | 3300025923 | Bacteria | 2807 |
| 75 | Ga0207650_10001839 | 3300025925 | Bacteria | 14979 |
| 76 | Ga0207687_10286286 | 3300025927 | Bacteria | 1323 |
| 77 | Ga0207644_10000442 | 3300025931 | Bacteria | 26820 |
| 78 | Ga0207690_10090698 | 3300025932 | Bacteria | 2158 |
| 79 | Ga0207709_10010686 | 3300025935 | Bacteria | 5057 |
| 80 | Ga0207704_10120859 | 3300025938 | Bacteria | 1792 |
| 81 | Ga0207691_10164030 | 3300025940 | Bacteria | 1948 |
| 82 | Ga0207711_10146148 | 3300025941 | Bacteria | 2130 |
| 83 | Ga0207661_10173474 | 3300025944 | Bacteria | 1878 |
| 84 | Ga0207668_10000110 | 3300025972 | Bacteria | 58891 |
| 85 | Ga0207658_10000002 | 3300025986 | Bacteria | 1364188 |
| 86 | Ga0207703_10000489 | 3300026035 | Bacteria | 41162 |
| 87 | Ga0207678_10333099 | 3300026067 | Bacteria | 1307 |
| 88 | Ga0207678_10455733 | 3300026067 | Bacteria | 1112 |
| 89 | Ga0207708_10005854 | 3300026075 | Bacteria | 9095 |
| 90 | Ga0207641_10000282 | 3300026088 | Bacteria | 63828 |
| 91 | Ga0207641_10005995 | 3300026088 | Bacteria | 10299 |
| 92 | Ga0207648_10000833 | 3300026089 | Bacteria | 34734 |
| 93 | Ga0207675_100005432 | 3300026118 | Bacteria | 12212 |
| 94 | Ga0210002_1011745 | 3300027617 | Bacteria | 1356 |
| 95 | Ga0268266_10137091 | 3300028379 | Bacteria | 2193 |
| 96 | Ga0268264_10000103 | 3300028381 | Bacteria | 222439 |
| 97 | Ga0307406_10216226 | 3300031901 | Bacteria | 1421 |
| 98 | Ga0307412_10031785 | 3300031911 | Bacteria | 3337 |
| 99 | Ga0307409_101112708 | 3300031995 | Bacteria | 811 |
| 100 | Ga0307414_10010997 | 3300032004 | Bacteria | 5288 |
| 101 | Ga0307414_10029798 | 3300032004 | Bacteria | 3556 |
| 102 | Ga0307414_10074071 | 3300032004 | Bacteria | 2465 |
| 103 | Ga0307414_10079927 | 3300032004 | Bacteria | 2389 |
| 104 | Ga0307414_10161176 | 3300032004 | Bacteria | 1782 |
| 105 | Ga0307414_10311962 | 3300032004 | Bacteria | 1335 |
| 106 | Ga0307414_10472222 | 3300032004 | Bacteria | 1104 |
| 107 | Ga0307414_10892866 | 3300032004 | Bacteria | 814 |
| 108 | Ga0395905_0000074 | 3300037471 | Bacteria | 167312 |
| 109 | Ga0451807_1697861 | 3300041486 | Bacteria | 1257 |
| 110 | Ga0451807_2606636 | 3300041486 | Bacteria | 849 |
| 111 | Ga0451577_0279872 | 3300042876 | Bacteria | 1511 |
| 112 | Ga0466969_0000623 | 3300044656 | Bacteria | 19161 |
| 113 | Ga0466966_0000150 | 3300044684 | Bacteria | 44602 |
| 114 | Ga0466961_0000244 | 3300044693 | Bacteria | 36645 |
| 115 | Ga0453684_0074822 | 3300044712 | Bacteria | 4261 |
| 116 | Ga0466970_0002093 | 3300044765 | Bacteria | 9645 |
| 117 | Ga0466957_0004182 | 3300044842 | Bacteria | 7997 |
| 118 | Ga0466957_0233246 | 3300044842 | Bacteria | 1219 |
| 119 | Ga0466960_0015930 | 3300044901 | Bacteria | 3250 |
| 120 | Ga0466960_0184737 | 3300044901 | Bacteria | 1132 |
| 121 | Ga0466959_0000072 | 3300045049 | Bacteria | 66935 |
| 122 | Ga0451576_0003538 | 3300045051 | Bacteria | 21305 |
| 123 | Ga0466958_0040356 | 3300045836 | Bacteria | 2805 |
| 124 | Ga0495620_0087770 | 3300046515 | Bacteria | 1251 |
| 125 | Ga0495633_0002153 | 3300046558 | Bacteria | 14119 |
| 126 | Ga0495649_0000134 | 3300046694 | Bacteria | 64953 |
| 127 | Ga0495686_0091286 | 3300047472 | Bacteria | 1849 |
| 128 | Ga0495615_0020705 | 3300048090 | Bacteria | 1477 |
| 129 | Ga0496100_0455918 | 3300048903 | Bacteria | 981 |
| 130 | Ga0496104_0025556 | 3300048907 | Bacteria | 5445 |
| 131 | Ga0496105_0174121 | 3300048908 | Bacteria | 1763 |
| 132 | Ga0496109_0247871 | 3300048912 | Bacteria | 1677 |
| 133 | Ga0496110_0047763 | 3300048913 | Bacteria | 3750 |
| 134 | Ga0496111_0168386 | 3300048914 | Bacteria | 1628 |
| 135 | Ga0496111_0229549 | 3300048914 | Bacteria | 1379 |
| 136 | Ga0496114_0849961 | 3300048917 | Bacteria | 793 |
| 137 | Ga0496115_0412310 | 3300048918 | Bacteria | 1095 |
| 138 | Ga0496116_0041309 | 3300048919 | Bacteria | 3165 |
| 139 | Ga0496121_0533036 | 3300048924 | Bacteria | 738 |
| 140 | Ga0496122_0043854 | 3300048925 | Bacteria | 3499 |
| 141 | Ga0496125_0000771 | 3300048928 | Bacteria | 52335 |
| 142 | Ga0501034_0049247 | 3300049571 | Bacteria | 4252 |
| 143 | Ga0501034_0470184 | 3300049571 | Bacteria | 1173 |
| 144 | Ga0501036_0114302 | 3300049572 | Bacteria | 2281 |
| 145 | Ga0501043_0063875 | 3300049579 | Bacteria | 2891 |
| 146 | Ga0501043_0363844 | 3300049579 | Bacteria | 1097 |
| 147 | Ga0501067_0040081 | 3300049583 | Bacteria | 2602 |
| 148 | Ga0501067_0170444 | 3300049583 | Bacteria | 1212 |
| 149 | Ga0501069_0114886 | 3300049585 | Bacteria | 1535 |
| 150 | Ga0501070_0325135 | 3300049586 | Bacteria | 1250 |
| 151 | Ga0501074_0280795 | 3300049590 | Bacteria | 1184 |
| 152 | Ga0501083_0164478 | 3300049744 | Bacteria | 1451 |
| 153 | Ga0501035_0002613 | 3300049822 | Bacteria | 17571 |
| 154 | Ga0501035_0174523 | 3300049822 | Bacteria | 1855 |
| 155 | nmdc:mga00v17_279552_c1 | 3300050491 | Bacteria | 1083 |
| 156 | nmdc:mga0yw44_23650_c1 | 3300050492 | Bacteria | 3465 |
| 157 | Ga0500635_0003354 | 3300053080 | Bacteria | 4019 |
| 158 | Ga0500644_0012247 | 3300053088 | Bacteria | 2367 |
| 159 | Ga0500651_0068775 | 3300053093 | Bacteria | 2205 |
| 160 | Ga0500592_008534 | 3300053116 | Bacteria | 1626 |
| 161 | Ga0500608_000279 | 3300053122 | Bacteria | 19768 |
| 162 | Ga0500559_0051448 | 3300053136 | Bacteria | 1819 |
| 163 | Ga0500559_0084307 | 3300053136 | Bacteria | 1449 |
| 164 | Ga0500573_0029022 | 3300053140 | Bacteria | 3188 |
| 165 | Ga0501082_0302691 | 3300060353 | Bacteria | 1392 |
| 166 | Ga0466962_0001324 | 3300061719 | Bacteria | 11433 |
| 167 | Ga0466962_0096520 | 3300061719 | Bacteria | 1417 |
| 168 | Ga0530510_0188418 | 3300061734 | Bacteria | 1531 |
Family Sequences
| Sample | Scaffold | Protein | Protein Length | |
|---|---|---|---|---|
| 1 | 3300015689 | Ga0183360_11117 | Ga0183360_111172 | 209 |
| 2 | 3300003322 | rootL2_10246254 | rootL2_102462542 | 220 |
| 3 | 3300047472 | Ga0495686_0091286 | Ga0495686_0091286_166_840 | 220 |
| 4 | 3300048924 | Ga0496121_0533036 | Ga0496121_0533036_35_709 | 220 |
| 5 | 3300053122 | Ga0500608_000279 | Ga0500608_000279_10199_10873 | 220 |
| 6 | 3300049571 | Ga0501034_0049247 | Ga0501034_0049247_897_1574 | 221 |
| 7 | 3300015684 | Ga0183365_10001 | Ga0183365_100011450 | 222 |
| 8 | 3300025940 | Ga0207691_10164030 | Ga0207691_101640303 | 222 |
| 9 | 3300049571 | Ga0501034_0470184 | Ga0501034_0470184_279_959 | 222 |
| 10 | 3300049822 | Ga0501035_0002613 | Ga0501035_0002613_7282_7971 | 222 |
| 11 | 3300053080 | Ga0500635_0003354 | Ga0500635_0003354_715_1404 | 222 |
| 12 | iso_pu_bacteria | 2941485952 | 2941489334 | 222 |
| 13 | iso_pu_bacteria | 2977240413 | 2977242831 | 222 |
| 14 | 3300048917 | Ga0496114_0849961 | Ga0496114_0849961_78_767 | 224 |
| 15 | 3300053136 | Ga0500559_0051448 | Ga0500559_0051448_138_839 | 224 |
| 16 | 3300053136 | Ga0500559_0084307 | Ga0500559_0084307_128_829 | 224 |
| 17 | 3300049579 | Ga0501043_0363844 | Ga0501043_0363844_208_969 | 225 |
| 18 | iso_pu_bacteria | 2928972540 | 2928973052 | 225 |
| 19 | 3300003323 | rootH1_10142682 | rootH1_101426824 | 226 |
| 20 | 3300005295 | Ga0065707_10224201 | Ga0065707_102242011 | 226 |
| 21 | 3300005354 | Ga0070675_100133651 | Ga0070675_1001336513 | 226 |
| 22 | 3300013105 | Ga0157369_10014261 | Ga0157369_100142616 | 226 |
| 23 | 3300027617 | Ga0210002_1011745 | Ga0210002_10117451 | 226 |
| 24 | 3300032004 | Ga0307414_10161176 | Ga0307414_101611763 | 226 |
| 25 | 3300044656 | Ga0466969_0000623 | Ga0466969_0000623_1382_2104 | 226 |
| 26 | 3300044684 | Ga0466966_0000150 | Ga0466966_0000150_39566_40288 | 226 |
| 27 | 3300044693 | Ga0466961_0000244 | Ga0466961_0000244_27444_28166 | 226 |
| 28 | 3300044712 | Ga0453684_0074822 | Ga0453684_0074822_3397_4101 | 226 |
| 29 | 3300044765 | Ga0466970_0002093 | Ga0466970_0002093_5245_5967 | 226 |
| 30 | 3300044842 | Ga0466957_0004182 | Ga0466957_0004182_6297_7019 | 226 |
| 31 | 3300045049 | Ga0466959_0000072 | Ga0466959_0000072_48994_49716 | 226 |
| 32 | 3300045836 | Ga0466958_0040356 | Ga0466958_0040356_2020_2742 | 226 |
| 33 | 3300046694 | Ga0495649_0000134 | Ga0495649_0000134_3567_4268 | 226 |
| 34 | 3300048919 | Ga0496116_0041309 | Ga0496116_0041309_102_803 | 226 |
| 35 | 3300048928 | Ga0496125_0000771 | Ga0496125_0000771_19822_20523 | 226 |
| 36 | 3300053140 | Ga0500573_0029022 | Ga0500573_0029022_2373_3074 | 226 |
| 37 | 3300061719 | Ga0466962_0001324 | Ga0466962_0001324_5547_6269 | 226 |
| 38 | iso_pu_bacteria | 2739367756 | 2739790322 | 226 |
| 39 | iso_pu_bacteria | 2811994872 | 2812323853 | 226 |
| 40 | iso_pu_bacteria | 2833709550 | 2833711536 | 227 |
| 41 | 3300005331 | Ga0070670_100562274 | Ga0070670_1005622742 | 228 |
| 42 | 3300005337 | Ga0070682_100065170 | Ga0070682_1000651701 | 228 |
| 43 | 3300005338 | Ga0068868_100085559 | Ga0068868_1000855592 | 228 |
| 44 | 3300005345 | Ga0070692_10000566 | Ga0070692_1000056611 | 228 |
| 45 | 3300005366 | Ga0070659_100047391 | Ga0070659_1000473912 | 228 |
| 46 | 3300005438 | Ga0070701_10057467 | Ga0070701_100574673 | 228 |
| 47 | 3300005441 | Ga0070700_100034310 | Ga0070700_1000343103 | 228 |
| 48 | 3300005455 | Ga0070663_100185371 | Ga0070663_1001853712 | 228 |
| 49 | 3300005459 | Ga0068867_100013599 | Ga0068867_1000135994 | 228 |
| 50 | 3300005539 | Ga0068853_100113800 | Ga0068853_1001138002 | 228 |
| 51 | 3300005578 | Ga0068854_100135733 | Ga0068854_1001357332 | 228 |
| 52 | 3300005615 | Ga0070702_100074443 | Ga0070702_1000744433 | 228 |
| 53 | 3300005616 | Ga0068852_100001760 | Ga0068852_1000017605 | 228 |
| 54 | 3300005719 | Ga0068861_100003636 | Ga0068861_10000363610 | 228 |
| 55 | 3300005840 | Ga0068870_10012127 | Ga0068870_100121275 | 228 |
| 56 | 3300006038 | Ga0075365_10003637 | Ga0075365_100036373 | 228 |
| 57 | 3300006881 | Ga0068865_100008156 | Ga0068865_1000081565 | 228 |
| 58 | 3300009094 | Ga0111539_10254705 | Ga0111539_102547052 | 228 |
| 59 | 3300009098 | Ga0105245_10018413 | Ga0105245_100184133 | 228 |
| 60 | 3300009177 | Ga0105248_10020365 | Ga0105248_100203656 | 228 |
| 61 | 3300009551 | Ga0105238_10119389 | Ga0105238_101193893 | 228 |
| 62 | 3300009553 | Ga0105249_10006479 | Ga0105249_100064798 | 228 |
| 63 | 3300013102 | Ga0157371_10055208 | Ga0157371_100552082 | 228 |
| 64 | 3300013308 | Ga0157375_10363375 | Ga0157375_103633752 | 228 |
| 65 | 3300014325 | Ga0163163_10427869 | Ga0163163_104278692 | 228 |
| 66 | 3300014326 | Ga0157380_10013153 | Ga0157380_100131534 | 228 |
| 67 | 3300014745 | Ga0157377_10027767 | Ga0157377_100277672 | 228 |
| 68 | 3300025918 | Ga0207662_10148867 | Ga0207662_101488672 | 228 |
| 69 | 3300025927 | Ga0207687_10286286 | Ga0207687_102862862 | 228 |
| 70 | 3300025932 | Ga0207690_10090698 | Ga0207690_100906982 | 228 |
| 71 | 3300025935 | Ga0207709_10010686 | Ga0207709_100106863 | 228 |
| 72 | 3300025938 | Ga0207704_10120859 | Ga0207704_101208592 | 228 |
| 73 | 3300025941 | Ga0207711_10146148 | Ga0207711_101461483 | 228 |
| 74 | 3300025944 | Ga0207661_10173474 | Ga0207661_101734742 | 228 |
| 75 | 3300026067 | Ga0207678_10333099 | Ga0207678_103330992 | 228 |
| 76 | 3300026075 | Ga0207708_10005854 | Ga0207708_100058546 | 228 |
| 77 | 3300026089 | Ga0207648_10000833 | Ga0207648_1000083320 | 228 |
| 78 | 3300026118 | Ga0207675_100005432 | Ga0207675_1000054326 | 228 |
| 79 | 3300042876 | Ga0451577_0279872 | Ga0451577_0279872_424_1143 | 228 |
| 80 | 3300048903 | Ga0496100_0455918 | Ga0496100_0455918_40_738 | 228 |
| 81 | 3300048912 | Ga0496109_0247871 | Ga0496109_0247871_943_1641 | 228 |
| 82 | 3300049583 | Ga0501067_0170444 | Ga0501067_0170444_320_1018 | 228 |
| 83 | 3300050492 | nmdc:mga0yw44_23650_c1 | nmdc:mga0yw44_23650_c1_327_1025 | 228 |
| 84 | 3300061734 | Ga0530510_0188418 | Ga0530510_0188418_464_1162 | 228 |
| 85 | iso_pu_bacteria | 2643221597 | 2643995350 | 228 |
| 86 | iso_pu_bacteria | 2643221663 | 2644352971 | 228 |
| 87 | iso_pu_bacteria | 2643221699 | 2644550262 | 228 |
| 88 | iso_pu_bacteria | 2808606306 | 2808630658 | 228 |
| 89 | 3300003578 | Ga0006562J51391_1187832 | Ga0006562J51391_11878324 | 229 |
| 90 | 3300003578 | Ga0006562J51391_1187833 | Ga0006562J51391_11878332 | 229 |
| 91 | 3300013104 | Ga0157370_10023618 | Ga0157370_100236188 | 229 |
| 92 | 3300032004 | Ga0307414_10010997 | Ga0307414_100109973 | 229 |
| 93 | 3300032004 | Ga0307414_10029798 | Ga0307414_100297983 | 229 |
| 94 | 3300032004 | Ga0307414_10311962 | Ga0307414_103119621 | 229 |
| 95 | 3300046515 | Ga0495620_0087770 | Ga0495620_0087770_277_975 | 229 |
| 96 | 3300046558 | Ga0495633_0002153 | Ga0495633_0002153_10635_11345 | 229 |
| 97 | 3300048090 | Ga0495615_0020705 | Ga0495615_0020705_531_1229 | 229 |
| 98 | 3300048914 | Ga0496111_0229549 | Ga0496111_0229549_507_1217 | 229 |
| 99 | 3300048925 | Ga0496122_0043854 | Ga0496122_0043854_1299_2009 | 229 |
| 100 | iso_pu_bacteria | 2773857763 | 2774398882 | 229 |
| 101 | iso_pu_bacteria | 8045830549 | 8045830663 | 229 |
| 102 | 3300003320 | rootH2_10081453 | rootH2_100814534 | 230 |
| 103 | 3300003322 | rootL2_10049270 | rootL2_100492703 | 230 |
| 104 | 3300003322 | rootL2_10049271 | rootL2_100492712 | 230 |
| 105 | 3300003323 | rootH1_10035577 | rootH1_100355778 | 230 |
| 106 | 3300031995 | Ga0307409_101112708 | Ga0307409_1011127081 | 230 |
| 107 | 3300032004 | Ga0307414_10074071 | Ga0307414_100740712 | 230 |
| 108 | 3300032004 | Ga0307414_10079927 | Ga0307414_100799273 | 230 |
| 109 | 3300032004 | Ga0307414_10892866 | Ga0307414_108928661 | 230 |
| 110 | 3300037471 | Ga0395905_0000074 | Ga0395905_0000074_150044_150757 | 230 |
| 111 | 3300049572 | Ga0501036_0114302 | Ga0501036_0114302_1200_1991 | 230 |
| 112 | 3300049579 | Ga0501043_0063875 | Ga0501043_0063875_1380_2171 | 230 |
| 113 | 3300049822 | Ga0501035_0174523 | Ga0501035_0174523_540_1331 | 230 |
| 114 | 3300061719 | Ga0466962_0096520 | Ga0466962_0096520_628_1341 | 230 |
| 115 | iso_pu_bacteria | 2643221574 | 2643882805 | 230 |
| 116 | iso_pu_bacteria | 2643221699 | 2644552566 | 230 |
| 117 | 3300003781 | Ga0055536_1000840 | Ga0055536_100084021 | 231 |
| 118 | 3300003794 | Ga0055531_10007789 | Ga0055531_100077893 | 231 |
| 119 | 3300025292 | Ga0209676_1000082 | Ga0209676_100008278 | 231 |
| 120 | 3300025304 | Ga0209257_1000459 | Ga0209257_100045935 | 231 |
| 121 | 3300031911 | Ga0307412_10031785 | Ga0307412_100317856 | 231 |
| 122 | 3300032004 | Ga0307414_10472222 | Ga0307414_104722222 | 231 |
| 123 | 3300048907 | Ga0496104_0025556 | Ga0496104_0025556_3795_4490 | 231 |
| 124 | 3300048908 | Ga0496105_0174121 | Ga0496105_0174121_575_1270 | 231 |
| 125 | 3300048913 | Ga0496110_0047763 | Ga0496110_0047763_22_717 | 231 |
| 126 | 3300048914 | Ga0496111_0168386 | Ga0496111_0168386_145_840 | 231 |
| 127 | 3300048918 | Ga0496115_0412310 | Ga0496115_0412310_209_904 | 231 |
| 128 | 3300041486 | Ga0451807_1697861 | Ga0451807_1697861_487_1185 | 232 |
| 129 | 3300044842 | Ga0466957_0233246 | Ga0466957_0233246_15_713 | 232 |
| 130 | 3300044901 | Ga0466960_0184737 | Ga0466960_0184737_407_1105 | 232 |
| 131 | 3300049583 | Ga0501067_0040081 | Ga0501067_0040081_1511_2215 | 232 |
| 132 | 3300049585 | Ga0501069_0114886 | Ga0501069_0114886_511_1215 | 232 |
| 133 | 3300049586 | Ga0501070_0325135 | Ga0501070_0325135_252_956 | 232 |
| 134 | 3300049590 | Ga0501074_0280795 | Ga0501074_0280795_107_811 | 232 |
| 135 | 3300049744 | Ga0501083_0164478 | Ga0501083_0164478_466_1170 | 232 |
| 136 | 3300060353 | Ga0501082_0302691 | Ga0501082_0302691_394_1098 | 232 |
| 137 | 3300003320 | rootH2_10069841 | rootH2_100698412 | 233 |
| 138 | 3300003323 | rootH1_10075498 | rootH1_100754982 | 233 |
| 139 | 3300005455 | Ga0070663_100366275 | Ga0070663_1003662752 | 233 |
| 140 | 3300005548 | Ga0070665_100152446 | Ga0070665_1001524462 | 233 |
| 141 | 3300014326 | Ga0157380_10196317 | Ga0157380_101963173 | 233 |
| 142 | 3300026067 | Ga0207678_10455733 | Ga0207678_104557332 | 233 |
| 143 | 3300028379 | Ga0268266_10137091 | Ga0268266_101370912 | 233 |
| 144 | 3300031901 | Ga0307406_10216226 | Ga0307406_102162261 | 233 |
| 145 | 3300044901 | Ga0466960_0015930 | Ga0466960_0015930_490_1221 | 233 |
| 146 | 3300053088 | Ga0500644_0012247 | Ga0500644_0012247_213_935 | 233 |
| 147 | 3300053093 | Ga0500651_0068775 | Ga0500651_0068775_450_1172 | 233 |
| 148 | iso_pu_bacteria | 2643221566 | 2643849144 | 233 |
| 149 | 3300041486 | Ga0451807_2606636 | Ga0451807_2606636_56_799 | 234 |
| 150 | 3300045051 | Ga0451576_0003538 | Ga0451576_0003538_20251_20961 | 234 |
| 151 | iso_pu_bacteria | 2821268502 | 2821270543 | 235 |
| 152 | 3300006038 | Ga0075365_10003919 | Ga0075365_100039192 | 236 |
| 153 | 3300006048 | Ga0075363_100074090 | Ga0075363_1000740902 | 236 |
| 154 | 3300006051 | Ga0075364_10241722 | Ga0075364_102417222 | 236 |
| 155 | 3300006178 | Ga0075367_10179845 | Ga0075367_101798452 | 236 |
| 156 | 3300006353 | Ga0075370_10010179 | Ga0075370_100101793 | 236 |
| 157 | 3300050491 | nmdc:mga00v17_279552_c1 | nmdc:mga00v17_279552_c1_103_843 | 236 |
| 158 | 3300053116 | Ga0500592_008534 | Ga0500592_008534_781_1527 | 236 |
| 159 | 3300002459 | JGI24751J29686_10020293 | JGI24751J29686_100202932 | 237 |
| 160 | 3300005331 | Ga0070670_100000371 | Ga0070670_10000037125 | 237 |
| 161 | 3300005335 | Ga0070666_10066379 | Ga0070666_100663792 | 237 |
| 162 | 3300005347 | Ga0070668_100000006 | Ga0070668_10000000699 | 237 |
| 163 | 3300005353 | Ga0070669_100004839 | Ga0070669_1000048398 | 237 |
| 164 | 3300005353 | Ga0070669_100053156 | Ga0070669_1000531562 | 237 |
| 165 | 3300005355 | Ga0070671_100000120 | Ga0070671_10000012024 | 237 |
| 166 | 3300005355 | Ga0070671_100276428 | Ga0070671_1002764282 | 237 |
| 167 | 3300005367 | Ga0070667_100000003 | Ga0070667_100000003135 | 237 |
| 168 | 3300005617 | Ga0068859_100029568 | Ga0068859_1000295687 | 237 |
| 169 | 3300005841 | Ga0068863_100001154 | Ga0068863_1000011548 | 237 |
| 170 | 3300005841 | Ga0068863_100119337 | Ga0068863_1001193373 | 237 |
| 171 | 3300005843 | Ga0068860_100000068 | Ga0068860_10000006852 | 237 |
| 172 | 3300005844 | Ga0068862_100000267 | Ga0068862_10000026739 | 237 |
| 173 | 3300006931 | Ga0097620_100029568 | Ga0097620_1000295683 | 237 |
| 174 | 3300025903 | Ga0207680_10308808 | Ga0207680_103088082 | 237 |
| 175 | 3300025923 | Ga0207681_10002686 | Ga0207681_1000268610 | 237 |
| 176 | 3300025923 | Ga0207681_10050777 | Ga0207681_100507772 | 237 |
| 177 | 3300025925 | Ga0207650_10001839 | Ga0207650_100018396 | 237 |
| 178 | 3300025931 | Ga0207644_10000442 | Ga0207644_1000044217 | 237 |
| 179 | 3300025972 | Ga0207668_10000110 | Ga0207668_1000011049 | 237 |
| 180 | 3300025986 | Ga0207658_10000002 | Ga0207658_100000021034 | 237 |
| 181 | 3300026035 | Ga0207703_10000489 | Ga0207703_1000048921 | 237 |
| 182 | 3300026088 | Ga0207641_10000282 | Ga0207641_1000028215 | 237 |
| 183 | 3300026088 | Ga0207641_10005995 | Ga0207641_100059953 | 237 |
| 184 | 3300028381 | Ga0268264_10000103 | Ga0268264_1000010398 | 237 |
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 6rxl-assembly1.cif.gz_A | crystal structure of cobb wt in complex with h4k16-crotonyl peptide | 0.9687 | 5 | 234 |
| 6rxr-assembly1.cif.gz_A | crystal structure of cobb ac2 (a76g, i131c, v162g) in complex with h4k16cr-2'oh-adpr peptide intermediate after co-crystallisation | 0.9662 | 5 | 234 |
| 6rxm-assembly1.cif.gz_A | crystal structure of cobb ac2 (a76g, i131c, v162g) in complex with h4k16-acetyl peptide | 0.9592 | 5 | 234 |
| 6rxm-assembly4.cif.gz_D | crystal structure of cobb ac2 (a76g, i131c, v162g) in complex with h4k16-acetyl peptide | 0.9591 | 5 | 234 |
| 6rxr-assembly4.cif.gz_D | crystal structure of cobb ac2 (a76g, i131c, v162g) in complex with h4k16cr-2'oh-adpr peptide intermediate after co-crystallisation | 0.9559 | 5 | 234 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| af_A4IAM7_70_238_3.40.50.1220 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;TPP-binding domain | 0.9787 | 68 | 232 | 3.40.50.1220 |
| af_P75960_40_271_3.40.50.1220 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;TPP-binding domain | 0.9676 | 5 | 232 | 3.40.50.1220 |
| 1s5pA01 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;TPP-binding domain | 0.9644 | 5 | 234 | 3.40.50.1220 |
| af_A4IAM7_70_238_3.40.50.1220 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;TPP-binding domain | 0.9504 | 68 | 232 | 3.40.50.1220 |
| af_P75960_40_271_3.40.50.1220 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;TPP-binding domain | 0.9472 | 5 | 232 | 3.40.50.1220 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A088S7Y6-F1-model_v4 | NAD-dependent protein deacylase (EC 2.3.1.-) (Regulatory protein SIR2 homolog 5) | 0.9855 | 4 | 236 |
GO:0005634
GO:0005739 GO:0008270 GO:0017136 GO:0036054 GO:0036055 GO:0061697 GO:0070403 |
| AF-A0A2T5FTV8-F1-model_v4 | NAD-dependent protein deacylase (EC 2.3.1.286) (Regulatory protein SIR2 homolog) | 0.9848 | 1 | 236 |
GO:0005737
GO:0008270 GO:0032041 GO:0036054 GO:0036055 GO:0046969 GO:0046970 GO:0070403 GO:0097372 GO:0140765 GO:0141222 |
| AF-A0A7T9QA48-F1-model_v4 | deleted | 0.9839 | 4 | 233 |
|
| AF-A0A858RRV6-F1-model_v4 | NAD-dependent protein deacylase (EC 2.3.1.286) (Regulatory protein SIR2 homolog) | 0.9827 | 6 | 231 |
GO:0005737
GO:0008270 GO:0017136 GO:0036054 GO:0036055 GO:0070403 |
| AF-A0A848SJA8-F1-model_v4 | protein acetyllysine N-acetyltransferase (EC 2.3.1.286) | 0.9825 | 1 | 163 |
GO:0017136
GO:0046872 GO:0070403 |
Predicted Structure (AlphaFold2)
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