F282777

General Info

Members Datasets Scaffolds Average Seq Length
184 146 184 225

Family's Representative Sequence

Representative Sequence 3300028800|Ga0265338_10027994|Ga0265338_100279946
Length 256
Sequence LKKVLACLILICMATKESVRSVAIEDYCKAIYTLETRDDEPVSTNALSERLELTTGSVSGMLKKLDELGLISHVPYRGVRLTPEGRRLALEVIRHHRLLELYLAEALHMPWDRVHDEAEVLEHVLSEELEALIAAKLGDPTIDPHGDPIPSVDLELEEHPTRSLDSLDPGDHGTFVRVSDADPAMLRYLADQGIMPGGRIEVLERQPFGGPLRVSVDGCEHTLGGGLLRAMRVNAEAVEPAGLGEARTATLGEGSA

Samples

Sample ID Description Type Environment
1 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
2 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
3 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
4 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
5 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
6 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
7 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
8 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
9 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
10 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
11 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
12 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
13 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
14 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
15 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
16 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
17 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
18 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
19 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
20 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
21 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
22 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
23 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
24 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
25 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
26 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
27 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
28 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
29 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
30 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
47 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
48 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
49 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
52 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
54 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
55 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
56 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
57 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
58 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
59 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
60 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
61 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
62 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
63 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
64 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
65 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
66 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
67 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
68 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
69 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
70 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
71 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
72 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
73 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
74 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
75 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
76 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
77 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
78 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
79 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
80 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
81 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
82 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
83 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
84 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
85 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
86 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
87 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
88 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
89 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
90 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
91 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
92 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
93 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
94 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
95 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
96 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
97 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
98 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
99 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
100 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
101 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
102 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
103 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
104 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
105 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
106 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
107 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
108 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
109 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
110 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
111 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
112 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
113 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
114 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
115 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
116 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
117 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
118 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
119 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
120 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
121 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
122 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
123 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
124 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
125 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
126 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
127 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
128 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
129 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
130 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
131 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
132 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
133 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
134 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
135 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
136 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
137 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
138 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
139 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
140 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
141 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
142 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
143 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
144 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
145 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
146 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.09
Nodule 0
Rhizoplane 8.7
Rhizosphere 90.22
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070661_100618633 3300005344 Bacteria 877
2 Ga0070711_100722670 3300005439 Archaea 840
3 Ga0070700_100704687 3300005441 Bacteria 803
4 Ga0070697_100549083 3300005536 Archaea 1013
5 Ga0070665_100197832 3300005548 Bacteria 2011
6 Ga0070664_100088500 3300005564 Bacteria 2678
7 Ga0068864_100088741 3300005618 Bacteria 2724
8 Ga0068866_10444719 3300005718 Bacteria 846
9 Ga0068870_10192356 3300005840 Bacteria 1232
10 Ga0081538_10003092 3300005981 Bacteria 15828
11 Ga0081538_10003885 3300005981 Bacteria 13950
12 Ga0081539_10131437 3300005985 Bacteria 1229
13 Ga0070717_10001797 3300006028 Bacteria 14970
14 Ga0070717_10509491 3300006028 Bacteria 1088
15 Ga0070712_100020502 3300006175 Bacteria 4326
16 Ga0070712_100279267 3300006175 Bacteria 1345
17 Ga0075434_100492886 3300006871 Bacteria 1246
18 Ga0068865_100440674 3300006881 Bacteria 1075
19 Ga0105240_10502324 3300009093 Bacteria 1348
20 Ga0111539_10109772 3300009094 Bacteria 3237
21 Ga0111539_10309558 3300009094 Bacteria 1838
22 Ga0111539_10868182 3300009094 Bacteria 1050
23 Ga0105245_10728358 3300009098 Bacteria 1026
24 Ga0114129_11130243 3300009147 Bacteria 979
25 Ga0105243_10935088 3300009148 Bacteria 865
26 Ga0105241_10731881 3300009174 Bacteria 905
27 Ga0105242_10497902 3300009176 Bacteria 1158
28 Ga0105237_10483073 3300009545 Bacteria 1245
29 Ga0105239_10056042 3300010375 Bacteria 4324
30 Ga0105239_10313619 3300010375 Bacteria 1768
31 Ga0105246_10640047 3300011119 Bacteria 924
32 Ga0105246_10766986 3300011119 Bacteria 852
33 Ga0157369_10347780 3300013105 Bacteria 1540
34 Ga0157375_10680128 3300013308 Bacteria 1184
35 Ga0157379_10180982 3300014968 Bacteria 1904
36 Ga0207688_10096455 3300025901 Bacteria 1703
37 Ga0207680_10000964 3300025903 Bacteria 13587
38 Ga0207685_10138570 3300025905 Bacteria 1088
39 Ga0207643_10243342 3300025908 Bacteria 1106
40 Ga0207671_10392099 3300025914 Bacteria 1104
41 Ga0207693_10073130 3300025915 Bacteria 2684
42 Ga0207649_10407303 3300025920 Bacteria 1019
43 Ga0207694_10269806 3300025924 Unclassified 1396
44 Ga0207687_10346869 3300025927 Bacteria 1208
45 Ga0207664_10000004 3300025929 Bacteria 493014
46 Ga0207664_10011260 3300025929 Bacteria 6345
47 Ga0207706_10036640 3300025933 Bacteria 4357
48 Ga0207704_10117453 3300025938 Bacteria 1812
49 Ga0207665_10140787 3300025939 Bacteria 1720
50 Ga0207679_10151901 3300025945 Bacteria 1886
51 Ga0207667_11043938 3300025949 Bacteria 803
52 Ga0207712_10196684 3300025961 Bacteria 1595
53 Ga0207712_10762772 3300025961 Bacteria 848
54 Ga0207668_10056503 3300025972 Bacteria 2734
55 Ga0207648_10125051 3300026089 Bacteria 2262
56 Ga0207676_10056975 3300026095 Bacteria 3076
57 Ga0207676_10422420 3300026095 Bacteria 1251
58 Ga0207675_100305216 3300026118 Bacteria 1551
59 Ga0207683_10448604 3300026121 Bacteria 1189
60 Ga0207698_10115503 3300026142 Bacteria 2260
61 Ga0207428_10147732 3300027907 Bacteria 1791
62 Ga0268266_10088786 3300028379 Bacteria 2706
63 Ga0265319_1000435 3300028563 Bacteria 30001
64 Ga0265319_1004439 3300028563 Bacteria 6944
65 Ga0265334_10001430 3300028573 Bacteria 11488
66 Ga0265318_10002072 3300028577 Bacteria 10984
67 Ga0265323_10034694 3300028653 Bacteria 1863
68 Ga0265336_10054916 3300028666 Bacteria 1199
69 Ga0265338_10007091 3300028800 Bacteria 14041
70 Ga0265338_10022903 3300028800 Bacteria 6445
71 Ga0265338_10027994 3300028800 Bacteria 5636
72 Ga0265338_10028622 3300028800 Bacteria 5551
73 Ga0265324_10041368 3300029957 Bacteria 1595
74 Ga0265330_10009968 3300031235 Bacteria 4496
75 Ga0265332_10009637 3300031238 Bacteria 4308
76 Ga0265332_10046201 3300031238 Bacteria 1875
77 Ga0265328_10005844 3300031239 Bacteria 5250
78 Ga0265320_10089244 3300031240 Bacteria 1429
79 Ga0265325_10006916 3300031241 Bacteria 6845
80 Ga0265325_10051891 3300031241 Bacteria 2107
81 Ga0265340_10010486 3300031247 Bacteria 4954
82 Ga0265339_10009681 3300031249 Bacteria 6030
83 Ga0265331_10075390 3300031250 Bacteria 1573
84 Ga0265327_10024603 3300031251 Bacteria 3531
85 Ga0265316_10027164 3300031344 Bacteria 4745
86 Ga0265316_10029631 3300031344 Bacteria 4496
87 Ga0307408_100092327 3300031548 Bacteria 2288
88 Ga0265313_10015219 3300031595 Bacteria 4496
89 Ga0265313_10027074 3300031595 Bacteria 3007
90 Ga0265314_10011431 3300031711 Bacteria 7328
91 Ga0265314_10013600 3300031711 Bacteria 6565
92 Ga0265314_10144247 3300031711 Bacteria 1468
93 Ga0265342_10017233 3300031712 Bacteria 4704
94 Ga0307405_10158056 3300031731 Bacteria 1602
95 Ga0307405_10254980 3300031731 Bacteria 1307
96 Ga0307410_10003755 3300031852 Bacteria 7695
97 Ga0307406_10126652 3300031901 Bacteria 1786
98 Ga0307406_10657966 3300031901 Bacteria 870
99 Ga0307407_10046960 3300031903 Bacteria 2447
100 Ga0307412_10048570 3300031911 Bacteria 2792
101 Ga0307409_100011730 3300031995 Bacteria 5544
102 Ga0307409_100012852 3300031995 Bacteria 5356
103 Ga0307416_100016224 3300032002 Bacteria 5169
104 Ga0307414_10703773 3300032004 Bacteria 915
105 Ga0307411_10042505 3300032005 Bacteria 2900
106 Ga0307415_100000390 3300032126 Bacteria 18616
107 Ga0307415_100008824 3300032126 Bacteria 5612
108 Ga0307415_100018791 3300032126 Bacteria 4183
109 Ga0373931_0367708 3300035691 Bacteria 904
110 Ga0373925_0158768 3300037068 Bacteria 1780
111 Ga0395905_0409047 3300037471 Bacteria 1252
112 Ga0395901_0210548 3300038443 Bacteria 2035
113 Ga0466965_0091892 3300044683 Bacteria 1545
114 Ga0466963_0002291 3300044694 Bacteria 10645
115 Ga0466963_0020360 3300044694 Bacteria 4171
116 Ga0466964_0000148 3300044706 Bacteria 18851
117 Ga0466964_0033250 3300044706 Bacteria 2054
118 Ga0466971_0072895 3300044719 Bacteria 1560
119 Ga0466957_0009159 3300044842 Bacteria 5648
120 Ga0466960_0077975 3300044901 Bacteria 1663
121 Ga0466960_0264390 3300044901 Bacteria 959
122 Ga0466959_0540008 3300045049 Bacteria 787
123 Ga0466967_0005523 3300045976 Bacteria 8778
124 Ga0466967_0044599 3300045976 Bacteria 3847
125 Ga0466967_0090729 3300045976 Bacteria 2776
126 Ga0466967_0158118 3300045976 Bacteria 2125
127 Ga0466967_0841618 3300045976 Bacteria 911
128 Ga0495653_0141837 3300046463 Bacteria 1689
129 Ga0495664_0000007 3300046477 Bacteria 386710
130 Ga0495645_0005328 3300046543 Bacteria 8811
131 Ga0495658_0191403 3300046683 Bacteria 1272
132 Ga0495589_0126301 3300046794 Bacteria 1230
133 Ga0495581_0359718 3300047315 Archaea 850
134 Ga0496100_0011876 3300048903 Bacteria 4972
135 Ga0496101_0003686 3300048904 Bacteria 9560
136 Ga0496102_0000002 3300048905 Bacteria 814588
137 Ga0496102_0061760 3300048905 Bacteria 3430
138 Ga0496103_0000046 3300048906 Bacteria 161981
139 Ga0496106_0001928 3300048909 Bacteria 15561
140 Ga0496107_0000678 3300048910 Bacteria 19291
141 Ga0496108_0475140 3300048911 Bacteria 1092
142 Ga0496108_0682527 3300048911 Bacteria 891
143 Ga0496109_0082869 3300048912 Bacteria 2957
144 Ga0496109_0345075 3300048912 Bacteria 1406
145 Ga0496110_0247821 3300048913 Bacteria 1621
146 Ga0496111_0025144 3300048914 Bacteria 4200
147 Ga0496112_0354046 3300048915 Bacteria 1410
148 Ga0496113_0334243 3300048916 Bacteria 1215
149 Ga0496115_0008367 3300048918 Bacteria 7655
150 Ga0501031_0498096 3300049568 Bacteria 786
151 Ga0501032_0008745 3300049569 Bacteria 7375
152 Ga0501033_0066264 3300049570 Bacteria 2656
153 Ga0501034_0089533 3300049571 Bacteria 3075
154 Ga0501037_0010371 3300049573 Bacteria 6835
155 Ga0501038_0010156 3300049574 Bacteria 8618
156 Ga0501039_0294037 3300049575 Bacteria 1277
157 Ga0501042_0384998 3300049578 Bacteria 1015
158 Ga0501043_0006092 3300049579 Bacteria 9690
159 Ga0501046_0028249 3300049580 Bacteria 4570
160 Ga0501047_0259516 3300049581 Bacteria 1585
161 Ga0501048_0009100 3300049582 Bacteria 7475
162 Ga0501067_0005416 3300049583 Bacteria 7088
163 Ga0501067_0018117 3300049583 Bacteria 3899
164 Ga0501069_0020441 3300049585 Bacteria 3587
165 Ga0501070_0012811 3300049586 Bacteria 7069
166 Ga0501070_0035918 3300049586 Bacteria 4139
167 Ga0501071_0107273 3300049587 Bacteria 2062
168 Ga0501072_0611176 3300049588 Bacteria 859
169 Ga0501073_0005067 3300049589 Bacteria 9879
170 Ga0501076_0298243 3300049592 Bacteria 1321
171 Ga0501076_0535246 3300049592 Bacteria 966
172 Ga0501080_0021634 3300049742 Bacteria 5954
173 Ga0501035_0008265 3300049822 Bacteria 9697
174 Ga0501044_0201981 3300049823 Bacteria 1945
175 Ga0501045_0186227 3300049824 Bacteria 1547
176 nmdc:mga08y16_119906_c1 3300050511 Bacteria 2738
177 nmdc:mga0a205_701303_c1 3300050515 Bacteria 862
178 Ga0495601_0031391 3300053077 Bacteria 3302
179 Ga0500556_0002691 3300053104 Bacteria 5512
180 Ga0500616_0021265 3300053153 Bacteria 3640
181 Ga0501084_0571251 3300054114 Bacteria 955
182 Ga0501082_0022281 3300060353 Bacteria 5458
183 Ga0466962_0064392 3300061719 Bacteria 1750
184 Ga0530510_0027347 3300061734 Bacteria 4086

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300009545 Ga0105237_10483073 Ga0105237_104830732 188
2 3300025914 Ga0207671_10392099 Ga0207671_103920992 188
3 3300044694 Ga0466963_0002291 Ga0466963_0002291_3530_4222 192
4 3300049575 Ga0501039_0294037 Ga0501039_0294037_428_1132 193
5 3300049592 Ga0501076_0298243 Ga0501076_0298243_317_1021 193
6 3300026121 Ga0207683_10448604 Ga0207683_104486042 200
7 3300009176 Ga0105242_10497902 Ga0105242_104979021 206
8 3300046794 Ga0495589_0126301 Ga0495589_0126301_262_939 206
9 3300053104 Ga0500556_0002691 Ga0500556_0002691_2722_3414 207
10 3300053153 Ga0500616_0021265 Ga0500616_0021265_1021_1713 207
11 3300009147 Ga0114129_11130243 Ga0114129_111302432 211
12 3300013105 Ga0157369_10347780 Ga0157369_103477802 211
13 3300044901 Ga0466960_0264390 Ga0466960_0264390_77_742 211
14 3300048912 Ga0496109_0345075 Ga0496109_0345075_427_1077 211
15 3300048913 Ga0496110_0247821 Ga0496110_0247821_467_1117 211
16 3300048914 Ga0496111_0025144 Ga0496111_0025144_2145_2795 211
17 3300048915 Ga0496112_0354046 Ga0496112_0354046_544_1194 211
18 3300048916 Ga0496113_0334243 Ga0496113_0334243_103_753 211
19 3300026118 Ga0207675_100305216 Ga0207675_1003052162 212
20 3300005441 Ga0070700_100704687 Ga0070700_1007046872 213
21 3300009174 Ga0105241_10731881 Ga0105241_107318811 213
22 3300025905 Ga0207685_10138570 Ga0207685_101385701 213
23 3300031901 Ga0307406_10657966 Ga0307406_106579662 213
24 3300032004 Ga0307414_10703773 Ga0307414_107037731 213
25 3300032126 Ga0307415_100018791 Ga0307415_1000187914 213
26 3300035691 Ga0373931_0367708 Ga0373931_0367708_84_746 213
27 3300044719 Ga0466971_0072895 Ga0466971_0072895_379_1041 213
28 3300046683 Ga0495658_0191403 Ga0495658_0191403_153_815 213
29 3300048903 Ga0496100_0011876 Ga0496100_0011876_3501_4163 213
30 3300048904 Ga0496101_0003686 Ga0496101_0003686_930_1592 213
31 3300048905 Ga0496102_0061760 Ga0496102_0061760_1069_1731 213
32 3300048909 Ga0496106_0001928 Ga0496106_0001928_10444_11106 213
33 3300048910 Ga0496107_0000678 Ga0496107_0000678_16824_17486 213
34 3300048918 Ga0496115_0008367 Ga0496115_0008367_4472_5134 213
35 3300050515 nmdc:mga0a205_701303_c1 nmdc:mga0a205_701303_c1_75_737 213
36 3300061719 Ga0466962_0064392 Ga0466962_0064392_853_1515 213
37 3300005981 Ga0081538_10003092 Ga0081538_100030923 214
38 3300011119 Ga0105246_10766986 Ga0105246_107669861 214
39 3300045976 Ga0466967_0090729 Ga0466967_0090729_1703_2368 214
40 3300049569 Ga0501032_0008745 Ga0501032_0008745_5666_6340 214
41 3300049570 Ga0501033_0066264 Ga0501033_0066264_338_1012 214
42 3300049571 Ga0501034_0089533 Ga0501034_0089533_17_691 214
43 3300049573 Ga0501037_0010371 Ga0501037_0010371_4942_5616 214
44 3300049574 Ga0501038_0010156 Ga0501038_0010156_6310_6984 214
45 3300049578 Ga0501042_0384998 Ga0501042_0384998_287_961 214
46 3300049579 Ga0501043_0006092 Ga0501043_0006092_2086_2760 214
47 3300049580 Ga0501046_0028249 Ga0501046_0028249_2454_3128 214
48 3300049581 Ga0501047_0259516 Ga0501047_0259516_449_1123 214
49 3300049582 Ga0501048_0009100 Ga0501048_0009100_3101_3775 214
50 3300049583 Ga0501067_0005416 Ga0501067_0005416_2821_3495 214
51 3300049586 Ga0501070_0012811 Ga0501070_0012811_2220_2894 214
52 3300049587 Ga0501071_0107273 Ga0501071_0107273_789_1463 214
53 3300049588 Ga0501072_0611176 Ga0501072_0611176_144_818 214
54 3300049589 Ga0501073_0005067 Ga0501073_0005067_3191_3865 214
55 3300049592 Ga0501076_0535246 Ga0501076_0535246_35_709 214
56 3300049742 Ga0501080_0021634 Ga0501080_0021634_466_1140 214
57 3300049822 Ga0501035_0008265 Ga0501035_0008265_3767_4441 214
58 3300049823 Ga0501044_0201981 Ga0501044_0201981_1148_1822 214
59 3300054114 Ga0501084_0571251 Ga0501084_0571251_264_938 214
60 3300060353 Ga0501082_0022281 Ga0501082_0022281_3966_4640 214
61 3300014968 Ga0157379_10180982 Ga0157379_101809821 215
62 3300028666 Ga0265336_10054916 Ga0265336_100549162 215
63 3300028800 Ga0265338_10007091 Ga0265338_1000709114 215
64 3300031238 Ga0265332_10046201 Ga0265332_100462012 215
65 3300031241 Ga0265325_10051891 Ga0265325_100518912 215
66 3300031250 Ga0265331_10075390 Ga0265331_100753901 215
67 3300031344 Ga0265316_10027164 Ga0265316_100271645 215
68 3300031595 Ga0265313_10027074 Ga0265313_100270742 215
69 3300031711 Ga0265314_10011431 Ga0265314_100114317 215
70 3300031712 Ga0265342_10017233 Ga0265342_100172336 215
71 3300045976 Ga0466967_0158118 Ga0466967_0158118_1407_2084 215
72 3300005548 Ga0070665_100197832 Ga0070665_1001978321 216
73 3300005564 Ga0070664_100088500 Ga0070664_1000885002 216
74 3300005618 Ga0068864_100088741 Ga0068864_1000887413 216
75 3300005840 Ga0068870_10192356 Ga0068870_101923562 216
76 3300005981 Ga0081538_10003885 Ga0081538_100038859 216
77 3300006028 Ga0070717_10001797 Ga0070717_1000179712 216
78 3300006881 Ga0068865_100440674 Ga0068865_1004406742 216
79 3300009093 Ga0105240_10502324 Ga0105240_105023242 216
80 3300009094 Ga0111539_10309558 Ga0111539_103095582 216
81 3300009094 Ga0111539_10868182 Ga0111539_108681822 216
82 3300009098 Ga0105245_10728358 Ga0105245_107283582 216
83 3300010375 Ga0105239_10056042 Ga0105239_100560422 216
84 3300010375 Ga0105239_10313619 Ga0105239_103136193 216
85 3300013308 Ga0157375_10680128 Ga0157375_106801282 216
86 3300025924 Ga0207694_10269806 Ga0207694_102698062 216
87 3300025927 Ga0207687_10346869 Ga0207687_103468692 216
88 3300025929 Ga0207664_10011260 Ga0207664_100112605 216
89 3300025933 Ga0207706_10036640 Ga0207706_100366401 216
90 3300025938 Ga0207704_10117453 Ga0207704_101174533 216
91 3300025945 Ga0207679_10151901 Ga0207679_101519013 216
92 3300025961 Ga0207712_10196684 Ga0207712_101966842 216
93 3300025961 Ga0207712_10762772 Ga0207712_107627721 216
94 3300026089 Ga0207648_10125051 Ga0207648_101250511 216
95 3300026095 Ga0207676_10056975 Ga0207676_100569752 216
96 3300026095 Ga0207676_10422420 Ga0207676_104224202 216
97 3300026142 Ga0207698_10115503 Ga0207698_101155032 216
98 3300028379 Ga0268266_10088786 Ga0268266_100887863 216
99 3300028563 Ga0265319_1004439 Ga0265319_10044395 216
100 3300028573 Ga0265334_10001430 Ga0265334_100014302 216
101 3300028577 Ga0265318_10002072 Ga0265318_100020726 216
102 3300028653 Ga0265323_10034694 Ga0265323_100346943 216
103 3300028800 Ga0265338_10022903 Ga0265338_100229031 216
104 3300028800 Ga0265338_10028622 Ga0265338_100286225 216
105 3300029957 Ga0265324_10041368 Ga0265324_100413682 216
106 3300031235 Ga0265330_10009968 Ga0265330_100099683 216
107 3300031238 Ga0265332_10009637 Ga0265332_100096372 216
108 3300031239 Ga0265328_10005844 Ga0265328_100058443 216
109 3300031240 Ga0265320_10089244 Ga0265320_100892441 216
110 3300031241 Ga0265325_10006916 Ga0265325_100069164 216
111 3300031247 Ga0265340_10010486 Ga0265340_100104865 216
112 3300031249 Ga0265339_10009681 Ga0265339_100096814 216
113 3300031344 Ga0265316_10029631 Ga0265316_100296313 216
114 3300031595 Ga0265313_10015219 Ga0265313_100152193 216
115 3300031711 Ga0265314_10013600 Ga0265314_100136004 216
116 3300031711 Ga0265314_10144247 Ga0265314_101442472 216
117 3300031731 Ga0307405_10254980 Ga0307405_102549802 216
118 3300031911 Ga0307412_10048570 Ga0307412_100485702 216
119 3300031995 Ga0307409_100012852 Ga0307409_1000128522 216
120 3300032126 Ga0307415_100000390 Ga0307415_1000003906 216
121 3300037471 Ga0395905_0409047 Ga0395905_0409047_218_907 216
122 3300038443 Ga0395901_0210548 Ga0395901_0210548_546_1235 216
123 3300044694 Ga0466963_0020360 Ga0466963_0020360_731_1423 216
124 3300044706 Ga0466964_0000148 Ga0466964_0000148_5953_6645 216
125 3300044842 Ga0466957_0009159 Ga0466957_0009159_3338_4030 216
126 3300045976 Ga0466967_0005523 Ga0466967_0005523_3906_4598 216
127 3300048911 Ga0496108_0682527 Ga0496108_0682527_162_830 216
128 3300049583 Ga0501067_0018117 Ga0501067_0018117_630_1313 216
129 3300049585 Ga0501069_0020441 Ga0501069_0020441_133_816 216
130 3300049586 Ga0501070_0035918 Ga0501070_0035918_2414_3097 216
131 3300061734 Ga0530510_0027347 Ga0530510_0027347_3095_3778 216
132 3300005344 Ga0070661_100618633 Ga0070661_1006186331 217
133 3300005439 Ga0070711_100722670 Ga0070711_1007226701 217
134 3300005536 Ga0070697_100549083 Ga0070697_1005490831 217
135 3300005718 Ga0068866_10444719 Ga0068866_104447191 217
136 3300005985 Ga0081539_10131437 Ga0081539_101314371 217
137 3300006028 Ga0070717_10509491 Ga0070717_105094912 217
138 3300006175 Ga0070712_100020502 Ga0070712_1000205021 217
139 3300006175 Ga0070712_100279267 Ga0070712_1002792672 217
140 3300006871 Ga0075434_100492886 Ga0075434_1004928862 217
141 3300009094 Ga0111539_10109772 Ga0111539_101097725 217
142 3300009148 Ga0105243_10935088 Ga0105243_109350882 217
143 3300011119 Ga0105246_10640047 Ga0105246_106400472 217
144 3300025901 Ga0207688_10096455 Ga0207688_100964552 217
145 3300025903 Ga0207680_10000964 Ga0207680_100009648 217
146 3300025908 Ga0207643_10243342 Ga0207643_102433422 217
147 3300025915 Ga0207693_10073130 Ga0207693_100731304 217
148 3300025920 Ga0207649_10407303 Ga0207649_104073032 217
149 3300025929 Ga0207664_10000004 Ga0207664_10000004224 217
150 3300025939 Ga0207665_10140787 Ga0207665_101407872 217
151 3300025949 Ga0207667_11043938 Ga0207667_110439381 217
152 3300025972 Ga0207668_10056503 Ga0207668_100565033 217
153 3300027907 Ga0207428_10147732 Ga0207428_101477321 217
154 3300028563 Ga0265319_1000435 Ga0265319_100043510 217
155 3300028800 Ga0265338_10027994 Ga0265338_100279946 217
156 3300031251 Ga0265327_10024603 Ga0265327_100246034 217
157 3300031548 Ga0307408_100092327 Ga0307408_1000923274 217
158 3300031731 Ga0307405_10158056 Ga0307405_101580564 217
159 3300031852 Ga0307410_10003755 Ga0307410_100037555 217
160 3300031901 Ga0307406_10126652 Ga0307406_101266524 217
161 3300031903 Ga0307407_10046960 Ga0307407_100469605 217
162 3300031995 Ga0307409_100011730 Ga0307409_1000117306 217
163 3300032002 Ga0307416_100016224 Ga0307416_1000162243 217
164 3300032005 Ga0307411_10042505 Ga0307411_100425051 217
165 3300032126 Ga0307415_100008824 Ga0307415_1000088245 217
166 3300037068 Ga0373925_0158768 Ga0373925_0158768_335_1012 217
167 3300044683 Ga0466965_0091892 Ga0466965_0091892_434_1114 217
168 3300044706 Ga0466964_0033250 Ga0466964_0033250_42_719 217
169 3300044901 Ga0466960_0077975 Ga0466960_0077975_599_1279 217
170 3300045049 Ga0466959_0540008 Ga0466959_0540008_54_731 217
171 3300045976 Ga0466967_0044599 Ga0466967_0044599_2872_3549 217
172 3300045976 Ga0466967_0841618 Ga0466967_0841618_177_863 217
173 3300046463 Ga0495653_0141837 Ga0495653_0141837_338_1039 217
174 3300046477 Ga0495664_0000007 Ga0495664_0000007_68732_69433 217
175 3300046543 Ga0495645_0005328 Ga0495645_0005328_4249_4947 217
176 3300047315 Ga0495581_0359718 Ga0495581_0359718_109_786 217
177 3300048905 Ga0496102_0000002 Ga0496102_0000002_696688_697389 217
178 3300048906 Ga0496103_0000046 Ga0496103_0000046_115855_116556 217
179 3300048911 Ga0496108_0475140 Ga0496108_0475140_204_884 217
180 3300048912 Ga0496109_0082869 Ga0496109_0082869_45_725 217
181 3300049568 Ga0501031_0498096 Ga0501031_0498096_55_750 217
182 3300049824 Ga0501045_0186227 Ga0501045_0186227_198_893 217
183 3300050511 nmdc:mga08y16_119906_c1 nmdc:mga08y16_119906_c1_957_1637 217
184 3300053077 Ga0495601_0031391 Ga0495601_0031391_2561_3262 217

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02742

Fe_dep_repr_C

Iron dependent repressor, metal binding and dimerisation domain

82

151

0.99

PF01325

Fe_dep_repress

Iron dependent repressor, N-terminal DNA binding domain

21

79

0.97

PF04023

FeoA

FeoA domain

162

235

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
2tdx-assembly1.cif.gz_A-2 diphtheria tox repressor (c102d mutant) complexed with nickel 0.9502 10 123
2ev0-assembly1.cif.gz_B bacillus subtilis manganese transport regulator (mntr) bound to cadmium 0.9488 7 125
1on1-assembly1.cif.gz_A bacillus subtilis manganese transport regulator (mntr) bound to manganese, ab conformation. 0.9485 7 125
1f5t-assembly1.cif.gz_A diphtheria tox repressor (c102d mutant) complexed with nickel and dtxr consensus binding sequence 0.9473 10 124
2isy-assembly1.cif.gz_B crystal structure of the nickel-activated two-domain iron-dependent regulator (ider) 0.9462 10 128
ID Description Score Start End Superfamily
af_Q57988_1_71_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9878 8 76 1.10.10.10
af_I6Y187_16_79_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9873 28 59 1.10.10.10
2qq9A02 Mainly Alpha;Orthogonal Bundle;Diphtheria Toxin Repressor; domain 2;Iron dependent repressor, metal binding and dimerisation domain 0.9834 79 122 1.10.60.10
1ddnC02 Mainly Alpha;Orthogonal Bundle;Diphtheria Toxin Repressor; domain 2;Iron dependent repressor, metal binding and dimerisation domain 0.9816 81 123 1.10.60.10
2qqaA02 Mainly Alpha;Orthogonal Bundle;Diphtheria Toxin Repressor; domain 2;Iron dependent repressor, metal binding and dimerisation domain 0.9808 79 122 1.10.60.10
ID Description Score Start End GO Terms
AF-A0A7Z9KQU1-F1-model_v4 Manganese transport regulator 0.9874 8 128 GO:0003677
GO:0003700
GO:0046914
GO:0046983
AF-A0A832TPC8-F1-model_v4 Metal-dependent transcriptional regulator 0.9858 8 128 GO:0003677
GO:0003700
GO:0046914
GO:0046983
AF-Q6LZJ6-F1-model_v4 Putatuve iron dependent repressor 0.9838 7 128 GO:0003677
GO:0003700
GO:0046914
GO:0046983
AF-L9XRF2-F1-model_v4 DtxR family iron (Metal) dependent repressor 0.9803 7 127 GO:0003677
GO:0003700
GO:0046914
GO:0046983
AF-A0A099T2D0-F1-model_v4 DtxR family iron (Metal) dependent repressor 0.9771 7 123 GO:0003677
GO:0003700
GO:0046914
GO:0046983

Feature Viewer

pLDDT pTM Quality
90.11 0.76 High
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Predicted Structure (AlphaFold2)

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