F281433

General Info

Members Datasets Scaffolds Average Seq Length
183 147 176 450

Family's Representative Sequence

Representative Sequence 3300048907|Ga0496104_0117749|Ga0496104_0117749_403_1866
Length 487
Sequence MYDLDIERIQTVAGLHIARTRRSAFCIAMAVDSSPDATPTSADEVCDLARAQGVRYVFAQFVDMHGKPSAKLVPTSHLEDLMEDGAGFAGFAAGDIGQRPNDPDVAAIPDPTTYTRLPWRPEIARLACDVTVEGEAWPYCPRTILRNQIARAAELGLELRMGIELEYFLLRRHDDGSLTVADHLDTMAQPCYDMRGLTRSLDFVTDVAGHLDALGWDNYATDHEDANGQFEQNFGYADALTTCDRAIFFRYMVESLAQERGLIATFMPKPFAHMTGNGCHLHLSLWRGDENVFHDADDPQGLGLSPSAYNFIGGLKEHAAAYIALTAPSVNSYKRLVVGSQSGSAWAPVYISYGSNNRTQMLRIPAAGRIEDRSVDGSCNPYLAATALLASGLDGVERGLDPGESTSAINLHQLSPAERDGLGIEMLPDNLLDATRALERDDVLREAMGSCRNEDYVDYFVRVKREEWQQAHSEITAWELERYLQLF

Samples

Sample ID Description Type Environment
1 2558860112 Pseudonocardia acaciae DSM 45401 Isolate Unclassified
2 2588253510 Rhizobacter sp. OV335 Isolate Rhizosphere
3 2857729791 Plantibacter sp. R-72288 Isolate Unclassified
4 2870782633 Pseudonocardia eucalypti DSM 45351 Isolate Unclassified
5 2905926851 Arthrobacter sedimenti MIC A30 Isolate Rhizosphere
6 2928121344 Plantibacter flavus 1756 Isolate Rhizosphere
7 2964326757 Planctomonas psychrotolerans J5903 Isolate Rhizosphere
8 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
9 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
10 3300004803 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-2 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
11 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
12 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
13 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
14 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
15 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
16 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
17 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
18 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
19 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
20 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
21 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
22 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
23 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
24 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
25 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
26 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
27 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
28 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
29 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
30 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
31 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
32 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
33 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
34 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
35 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
36 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
37 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
38 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
39 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
40 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
41 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
42 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
43 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
44 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
45 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
46 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
47 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
48 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
49 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300027526 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 AM (SPAdes) (version 2) Metagenome Rhizosphere
66 3300027695 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Rhizosphere soil Co-N PM (SPAdes) (version 2) Metagenome Rhizosphere
67 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
68 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
69 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
70 3300030760 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
71 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
72 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
73 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
74 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
75 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
76 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
77 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
78 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
79 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
80 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
81 3300035207 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 Metagenome Rhizosphere
82 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
83 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
84 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
85 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
86 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
87 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
88 3300038996 Genetically engineered switchgrass root microbial communities from Knoxville, USA - plot19 Metagenome Rhizosphere
89 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
90 3300042115 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926W_E14_080116_2642 Metagenome Rhizosphere
91 3300042531 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0117D_E14_082716_2253 Metagenome Rhizosphere
92 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
93 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
94 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
95 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
96 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
97 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
98 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
99 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
100 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
101 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
102 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
103 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
104 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
105 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
106 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
107 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
108 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
109 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
110 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
111 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
112 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
113 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
114 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
115 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
116 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
117 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
118 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
119 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
120 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
121 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
122 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
123 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
124 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
125 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
126 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
127 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
128 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
129 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
130 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
131 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
132 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
133 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
134 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
135 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
136 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
137 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
138 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
139 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
140 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
141 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
142 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
143 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
144 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
145 3300053739 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co1_10_3 endosphere Metagenome Endosphere
146 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
147 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 95.08
Metatranscriptomes 1.09
Isolates 3.83

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.83
Nodule 0
Rhizoplane 2.19
Rhizosphere 78.69
Stem 0
Stem Tuber 0
Unclassified 15.3

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24735J21928_10000258 3300002067 Bacteria 18483
2 rootH1_10164745 3300003323 Bacteria 2387
3 Ga0058862_12692499 3300004803 Bacteria 1567
4 Ga0065165_1002563 3300005262 Bacteria 15013
5 Ga0070683_100000616 3300005329 Bacteria 25601
6 Ga0070670_100002991 3300005331 Bacteria 13985
7 Ga0070680_100068103 3300005336 Bacteria 2921
8 Ga0070689_100116305 3300005340 Bacteria 2132
9 Ga0070675_100128286 3300005354 Bacteria 2159
10 Ga0070674_100040479 3300005356 Bacteria 3153
11 Ga0070674_100074101 3300005356 Bacteria 2415
12 Ga0070688_100105341 3300005365 Bacteria 1866
13 Ga0070667_100025135 3300005367 Bacteria 4951
14 Ga0070667_100047281 3300005367 Bacteria 3620
15 Ga0070714_100071593 3300005435 Bacteria 2998
16 Ga0070701_10052066 3300005438 Bacteria 2125
17 Ga0070708_100194071 3300005445 Bacteria 1900
18 Ga0068867_100088817 3300005459 Bacteria 2343
19 Ga0070707_100083951 3300005468 Bacteria 3077
20 Ga0070698_100168201 3300005471 Unclassified 2134
21 Ga0070697_100014885 3300005536 Bacteria 6105
22 Ga0068853_100077346 3300005539 Bacteria 2907
23 Ga0070672_100001011 3300005543 Bacteria 17069
24 Ga0070696_100067174 3300005546 Bacteria 2516
25 Ga0070665_100009675 3300005548 Bacteria 9744
26 Ga0068855_100000058 3300005563 Bacteria 134718
27 Ga0068855_100001373 3300005563 Bacteria 30117
28 Ga0068855_100003449 3300005563 Bacteria 19342
29 Ga0068861_100057013 3300005719 Bacteria 2983
30 Ga0068870_10025993 3300005840 Bacteria 2913
31 Ga0081538_10008457 3300005981 Bacteria 8728
32 Ga0081538_10024687 3300005981 Bacteria 4275
33 Ga0075370_10120304 3300006353 Bacteria 1528
34 Ga0075430_100000510 3300006846 Bacteria 29188
35 Ga0075434_100104547 3300006871 Bacteria 2841
36 Ga0075435_100032711 3300007076 Bacteria 4108
37 Ga0105240_10001892 3300009093 Bacteria 34765
38 Ga0105240_10048288 3300009093 Bacteria 5381
39 Ga0111539_10050743 3300009094 Bacteria 4943
40 Ga0105241_10099341 3300009174 Bacteria 2311
41 Ga0105237_10000012 3300009545 Bacteria 298377
42 Ga0105237_10000296 3300009545 Bacteria 68633
43 Ga0105237_10025522 3300009545 Bacteria 6043
44 Ga0105238_10010282 3300009551 Bacteria 9385
45 Ga0105239_10000250 3300010375 Bacteria 80439
46 Ga0105239_10001578 3300010375 Bacteria 30110
47 Ga0105246_10028811 3300011119 Bacteria 3650
48 Ga0157369_10028129 3300013105 Bacteria 6224
49 Ga0157369_10029320 3300013105 Bacteria 6082
50 Ga0163162_10149864 3300013306 Bacteria 2449
51 Ga0157376_10081198 3300014969 Bacteria 2783
52 Ga0157376_10164518 3300014969 Bacteria 2014
53 Ga0207692_10045944 3300025898 Bacteria 2187
54 Ga0207699_10134989 3300025906 Unclassified 1614
55 Ga0207643_10010865 3300025908 Bacteria 4910
56 Ga0207695_10035756 3300025913 Bacteria 5381
57 Ga0207671_10000029 3300025914 Bacteria 254968
58 Ga0207671_10002927 3300025914 Bacteria 17596
59 Ga0207693_10041958 3300025915 Bacteria 3601
60 Ga0207681_10122236 3300025923 Bacteria 1911
61 Ga0207650_10008884 3300025925 Bacteria 6864
62 Ga0207669_10003706 3300025937 Bacteria 6648
63 Ga0207669_10016942 3300025937 Bacteria 3722
64 Ga0207665_10011447 3300025939 Bacteria 5826
65 Ga0207665_10145824 3300025939 Bacteria 1692
66 Ga0207691_10001982 3300025940 Bacteria 20019
67 Ga0207691_10088930 3300025940 Bacteria 2770
68 Ga0207667_10001403 3300025949 Bacteria 30213
69 Ga0207668_10115306 3300025972 Bacteria 2024
70 Ga0207658_10060781 3300025986 Bacteria 2821
71 Ga0207648_10038685 3300026089 Bacteria 4197
72 Ga0207675_100007327 3300026118 Bacteria 10428
73 Ga0209968_1000766 3300027526 Bacteria 4952
74 Ga0209966_1000031 3300027695 Bacteria 63685
75 Ga0307517_10006892 3300028786 Bacteria 16715
76 Ga0265338_10010131 3300028800 Bacteria 11123
77 Ga0307512_10024586 3300030522 Bacteria 5356
78 Ga0265762_1000003 3300030760 Bacteria 26988
79 Ga0265327_10021572 3300031251 Bacteria 3882
80 Ga0307513_10098666 3300031456 Bacteria 2951
81 Ga0307509_10000120 3300031507 Bacteria 114238
82 Ga0307509_10003007 3300031507 Bacteria 26366
83 Ga0307509_10148253 3300031507 Bacteria 2267
84 Ga0307408_100112607 3300031548 Bacteria 2093
85 Ga0307508_10000163 3300031616 Bacteria 80086
86 Ga0307508_10000221 3300031616 Bacteria 69169
87 Ga0307508_10018824 3300031616 Bacteria 6275
88 Ga0307516_10008907 3300031730 Bacteria 11263
89 Ga0307409_100065364 3300031995 Bacteria 2862
90 Ga0307416_100229967 3300032002 Bacteria 1787
91 Ga0307507_10128845 3300033179 Bacteria 1989
92 Ga0307510_10017786 3300033180 Bacteria 8375
93 Ga0307510_10039883 3300033180 Bacteria 5164
94 Ga0307510_10082415 3300033180 Bacteria 3112
95 Ga0373942_0010071 3300035207 Bacteria 2219
96 Ga0373927_0001536 3300035695 Bacteria 17351
97 Ga0373947_0028176 3300035725 Bacteria 3290
98 Ga0373925_0000488 3300037068 Bacteria 39832
99 Ga0395898_0183936 3300037466 Bacteria 1997
100 Ga0395905_0004715 3300037471 Bacteria 14084
101 Ga0395901_0374208 3300038443 Bacteria 1467
102 Ga0242420_000621 3300038996 Bacteria 4148
103 Ga0400483_159873 3300039062 Bacteria 2644
104 Ga0450911_000100 3300042115 Bacteria 34941
105 Ga0450918_007583 3300042531 Bacteria 1917
106 Ga0466963_0005183 3300044694 Bacteria 7608
107 Ga0466963_0014127 3300044694 Bacteria 4918
108 Ga0495592_0000222 3300046454 Bacteria 48902
109 Ga0495590_0001957 3300046457 Bacteria 8693
110 Ga0495629_0003601 3300046459 Bacteria 11706
111 Ga0495580_0033308 3300046472 Bacteria 3714
112 Ga0495582_0000080 3300046473 Bacteria 48724
113 Ga0495621_0001102 3300046539 Bacteria 6956
114 Ga0495658_0005342 3300046683 Bacteria 6315
115 Ga0495613_0001098 3300046689 Bacteria 20663
116 Ga0495581_0001013 3300047315 Bacteria 15181
117 Ga0495680_0113610 3300047322 Bacteria 2005
118 Ga0496104_0117749 3300048907 Bacteria 2549
119 Ga0496105_0047871 3300048908 Bacteria 3528
120 Ga0496110_0025541 3300048913 Bacteria 5049
121 Ga0496113_0065564 3300048916 Bacteria 2749
122 Ga0496119_0004127 3300048922 Bacteria 14626
123 Ga0496119_0079804 3300048922 Bacteria 1889
124 Ga0496121_0002609 3300048924 Bacteria 27233
125 Ga0496121_0030769 3300048924 Bacteria 4923
126 Ga0496124_0011132 3300048927 Bacteria 9025
127 Ga0496125_0006005 3300048928 Bacteria 13294
128 Ga0496125_0007835 3300048928 Bacteria 11287
129 Ga0496125_0045073 3300048928 Bacteria 3717
130 Ga0496126_0063185 3300048929 Bacteria 3320
131 Ga0501031_0055871 3300049568 Bacteria 2572
132 Ga0501033_0013203 3300049570 Bacteria 6292
133 Ga0501036_0003046 3300049572 Bacteria 13351
134 Ga0501038_0009280 3300049574 Bacteria 9023
135 Ga0501039_0007295 3300049575 Bacteria 8421
136 Ga0501041_0019387 3300049577 Bacteria 4061
137 Ga0501043_0021271 3300049579 Bacteria 5085
138 Ga0501046_0013385 3300049580 Bacteria 6947
139 Ga0501047_0031732 3300049581 Bacteria 5096
140 Ga0501048_0003623 3300049582 Bacteria 11760
141 Ga0501067_0000018 3300049583 Bacteria 101701
142 Ga0501067_0004036 3300049583 Bacteria 8101
143 Ga0501068_0006119 3300049584 Bacteria 6619
144 Ga0501069_0000087 3300049585 Bacteria 44347
145 Ga0501070_0013919 3300049586 Bacteria 6773
146 Ga0501070_0052274 3300049586 Bacteria 3391
147 Ga0501071_0051065 3300049587 Bacteria 2979
148 Ga0501071_0110695 3300049587 Bacteria 2029
149 Ga0501071_0112291 3300049587 Bacteria 2015
150 Ga0501072_0066429 3300049588 Bacteria 2845
151 Ga0501075_0153953 3300049591 Bacteria 1753
152 Ga0501076_0148219 3300049592 Bacteria 1908
153 Ga0501077_0001700 3300049593 Bacteria 13270
154 Ga0501079_0007894 3300049741 Bacteria 8065
155 Ga0501079_0028582 3300049741 Bacteria 4280
156 Ga0501079_0197239 3300049741 Bacteria 1572
157 Ga0501080_0171875 3300049742 Bacteria 1998
158 Ga0501081_0018890 3300049743 Bacteria 4580
159 Ga0501035_0007182 3300049822 Bacteria 10422
160 Ga0501045_0006884 3300049824 Bacteria 7879
161 Ga0501045_0134291 3300049824 Bacteria 1840
162 nmdc:mga07m45_58368_c1 3300050496 Bacteria 2183
163 nmdc:mga0qj67_162_c1 3300050509 Bacteria 45067
164 nmdc:mga06r32_258648_c1 3300050510 Bacteria 1728
165 nmdc:mga0n895_252384_c1 3300050512 Bacteria 1790
166 nmdc:mga0n895_89232_c1 3300050512 Bacteria 3084
167 nmdc:mga0rr50_252947_c1 3300050513 Bacteria 1464
168 nmdc:mga0a205_24116_c1 3300050515 Bacteria 5777
169 nmdc:mga0a205_77676_c1 3300050515 Bacteria 3208
170 Ga0500644_0002308 3300053088 Bacteria 4801
171 Ga0500559_0000011 3300053136 Bacteria 164751
172 Ga0500622_0017473 3300053156 Bacteria 3816
173 Ga0500587_002104 3300053739 Bacteria 2844
174 Ga0501084_0015948 3300054114 Bacteria 6234
175 Ga0501084_0075407 3300054114 Bacteria 2826
176 Ga0530510_0022548 3300061734 Bacteria 4486

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300005543 Ga0070672_100001011 Ga0070672_1000010114 348
2 3300025940 Ga0207691_10001982 Ga0207691_1000198213 348
3 3300049587 Ga0501071_0112291 Ga0501071_0112291_305_1672 404
4 3300044694 Ga0466963_0014127 Ga0466963_0014127_3651_4901 408
5 3300025906 Ga0207699_10134989 Ga0207699_101349891 412
6 3300005981 Ga0081538_10008457 Ga0081538_100084575 421
7 3300047322 Ga0495680_0113610 Ga0495680_0113610_88_1401 421
8 3300005981 Ga0081538_10024687 Ga0081538_100246872 427
9 3300030522 Ga0307512_10024586 Ga0307512_100245862 427
10 3300031995 Ga0307409_100065364 Ga0307409_1000653642 428
11 3300046472 Ga0495580_0033308 Ga0495580_0033308_892_2235 428
12 3300048922 Ga0496119_0079804 Ga0496119_0079804_533_1828 429
13 3300003323 rootH1_10164745 rootH1_101647451 431
14 3300005719 Ga0068861_100057013 Ga0068861_1000570132 431
15 3300006871 Ga0075434_100104547 Ga0075434_1001045472 431
16 3300007076 Ga0075435_100032711 Ga0075435_1000327112 431
17 3300026118 Ga0207675_100007327 Ga0207675_1000073272 431
18 3300050512 nmdc:mga0n895_89232_c1 nmdc:mga0n895_89232_c1_1222_2589 431
19 3300050513 nmdc:mga0rr50_252947_c1 nmdc:mga0rr50_252947_c1_15_1382 431
20 3300050515 nmdc:mga0a205_77676_c1 nmdc:mga0a205_77676_c1_1436_2803 431
21 3300005340 Ga0070689_100116305 Ga0070689_1001163052 432
22 3300005563 Ga0068855_100000058 Ga0068855_10000005860 432
23 3300005563 Ga0068855_100003449 Ga0068855_1000034493 432
24 3300014969 Ga0157376_10081198 Ga0157376_100811982 432
25 3300026089 Ga0207648_10038685 Ga0207648_100386854 432
26 3300031616 Ga0307508_10000221 Ga0307508_1000022112 432
27 3300031730 Ga0307516_10008907 Ga0307516_100089075 432
28 3300049741 Ga0501079_0197239 Ga0501079_0197239_198_1550 432
29 iso_pu_bacteria 2588253510 2588294599 432
30 3300049593 Ga0501077_0001700 Ga0501077_0001700_4836_6200 434
31 3300025939 Ga0207665_10011447 Ga0207665_100114471 436
32 3300035725 Ga0373947_0028176 Ga0373947_0028176_1604_2974 436
33 3300046459 Ga0495629_0003601 Ga0495629_0003601_3414_4784 436
34 3300046473 Ga0495582_0000080 Ga0495582_0000080_27736_29106 436
35 3300046683 Ga0495658_0005342 Ga0495658_0005342_141_1511 436
36 3300046689 Ga0495613_0001098 Ga0495613_0001098_18432_19802 436
37 3300047315 Ga0495581_0001013 Ga0495581_0001013_8856_10226 436
38 3300005331 Ga0070670_100002991 Ga0070670_1000029914 437
39 3300005354 Ga0070675_100128286 Ga0070675_1001282861 437
40 3300005840 Ga0068870_10025993 Ga0068870_100259932 437
41 3300011119 Ga0105246_10028811 Ga0105246_100288112 437
42 3300025908 Ga0207643_10010865 Ga0207643_100108652 437
43 3300025925 Ga0207650_10008884 Ga0207650_100088844 437
44 3300005367 Ga0070667_100025135 Ga0070667_1000251352 438
45 3300005459 Ga0068867_100088817 Ga0068867_1000888172 438
46 3300005548 Ga0070665_100009675 Ga0070665_1000096753 438
47 3300009545 Ga0105237_10025522 Ga0105237_100255223 438
48 3300025986 Ga0207658_10060781 Ga0207658_100607812 438
49 3300027526 Ga0209968_1000766 Ga0209968_10007663 438
50 3300027695 Ga0209966_1000031 Ga0209966_100003156 438
51 iso_pu_bacteria 2558860112 2558905567 438
52 3300005262 Ga0065165_1002563 Ga0065165_10025636 439
53 3300037471 Ga0395905_0004715 Ga0395905_0004715_11815_13161 439
54 3300046457 Ga0495590_0001957 Ga0495590_0001957_3449_4795 439
55 3300049568 Ga0501031_0055871 Ga0501031_0055871_719_2083 439
56 3300049570 Ga0501033_0013203 Ga0501033_0013203_2357_3721 439
57 3300049572 Ga0501036_0003046 Ga0501036_0003046_7020_8384 439
58 3300049574 Ga0501038_0009280 Ga0501038_0009280_4841_6205 439
59 3300049575 Ga0501039_0007295 Ga0501039_0007295_5092_6456 439
60 3300049577 Ga0501041_0019387 Ga0501041_0019387_2407_3771 439
61 3300049579 Ga0501043_0021271 Ga0501043_0021271_3316_4680 439
62 3300049580 Ga0501046_0013385 Ga0501046_0013385_1967_3331 439
63 3300049582 Ga0501048_0003623 Ga0501048_0003623_7308_8672 439
64 3300049584 Ga0501068_0006119 Ga0501068_0006119_2962_4326 439
65 3300049586 Ga0501070_0013919 Ga0501070_0013919_2962_4326 439
66 3300049587 Ga0501071_0110695 Ga0501071_0110695_206_1570 439
67 3300049741 Ga0501079_0007894 Ga0501079_0007894_4929_6293 439
68 3300049742 Ga0501080_0171875 Ga0501080_0171875_157_1521 439
69 3300049743 Ga0501081_0018890 Ga0501081_0018890_76_1440 439
70 3300049822 Ga0501035_0007182 Ga0501035_0007182_2154_3518 439
71 3300049824 Ga0501045_0006884 Ga0501045_0006884_4677_6041 439
72 3300054114 Ga0501084_0015948 Ga0501084_0015948_2689_4053 439
73 iso_pu_bacteria 2870782633 2870786566 440
74 3300028786 Ga0307517_10006892 Ga0307517_1000689214 441
75 3300030760 Ga0265762_1000003 Ga0265762_10000034 441
76 3300033180 Ga0307510_10039883 Ga0307510_100398834 441
77 3300053088 Ga0500644_0002308 Ga0500644_0002308_1601_2932 441
78 3300053136 Ga0500559_0000011 Ga0500559_0000011_22962_24293 441
79 3300053156 Ga0500622_0017473 Ga0500622_0017473_1019_2350 441
80 3300053739 Ga0500587_002104 Ga0500587_002104_1214_2545 441
81 3300005539 Ga0068853_100077346 Ga0068853_1000773462 442
82 3300006353 Ga0075370_10120304 Ga0075370_101203042 442
83 3300009093 Ga0105240_10001892 Ga0105240_1000189210 442
84 3300009545 Ga0105237_10000296 Ga0105237_1000029615 442
85 3300009551 Ga0105238_10010282 Ga0105238_100102823 442
86 3300010375 Ga0105239_10000250 Ga0105239_1000025026 442
87 3300025914 Ga0207671_10002927 Ga0207671_1000292715 442
88 3300031456 Ga0307513_10098666 Ga0307513_100986662 442
89 3300031507 Ga0307509_10003007 Ga0307509_100030072 442
90 3300031507 Ga0307509_10148253 Ga0307509_101482532 442
91 3300031616 Ga0307508_10000163 Ga0307508_1000016366 442
92 3300031616 Ga0307508_10018824 Ga0307508_100188243 442
93 3300033179 Ga0307507_10128845 Ga0307507_101288452 442
94 3300033180 Ga0307510_10017786 Ga0307510_100177866 442
95 3300038443 Ga0395901_0374208 Ga0395901_0374208_20_1399 442
96 3300046454 Ga0495592_0000222 Ga0495592_0000222_15215_16549 442
97 3300050496 nmdc:mga07m45_58368_c1 nmdc:mga07m45_58368_c1_610_1944 442
98 3300031507 Ga0307509_10000120 Ga0307509_1000012039 443
99 3300033180 Ga0307510_10082415 Ga0307510_100824152 443
100 3300042115 Ga0450911_000100 Ga0450911_000100_30485_31822 443
101 3300042531 Ga0450918_007583 Ga0450918_007583_359_1717 443
102 3300048927 Ga0496124_0011132 Ga0496124_0011132_5285_6622 443
103 3300048928 Ga0496125_0006005 Ga0496125_0006005_9681_11018 443
104 3300048928 Ga0496125_0007835 Ga0496125_0007835_4718_6055 443
105 3300048929 Ga0496126_0063185 Ga0496126_0063185_96_1433 443
106 3300009174 Ga0105241_10099341 Ga0105241_100993412 444
107 3300009545 Ga0105237_10000012 Ga0105237_10000012235 444
108 3300025914 Ga0207671_10000029 Ga0207671_1000002939 444
109 3300035207 Ga0373942_0010071 Ga0373942_0010071_863_2197 444
110 3300035695 Ga0373927_0001536 Ga0373927_0001536_6161_7495 444
111 3300037068 Ga0373925_0000488 Ga0373925_0000488_21549_22883 444
112 3300039062 Ga0400483_159873 Ga0400483_159873_1110_2453 444
113 3300049591 Ga0501075_0153953 Ga0501075_0153953_325_1677 444
114 3300049741 Ga0501079_0028582 Ga0501079_0028582_2850_4202 444
115 3300014969 Ga0157376_10164518 Ga0157376_101645182 445
116 3300049581 Ga0501047_0031732 Ga0501047_0031732_2070_3569 445
117 3300005356 Ga0070674_100040479 Ga0070674_1000404792 446
118 3300005356 Ga0070674_100074101 Ga0070674_1000741012 446
119 3300005367 Ga0070667_100047281 Ga0070667_1000472813 446
120 3300025923 Ga0207681_10122236 Ga0207681_101222362 446
121 3300025937 Ga0207669_10003706 Ga0207669_100037065 446
122 3300025937 Ga0207669_10016942 Ga0207669_100169423 446
123 3300025940 Ga0207691_10088930 Ga0207691_100889302 446
124 3300025972 Ga0207668_10115306 Ga0207668_101153062 446
125 3300046539 Ga0495621_0001102 Ga0495621_0001102_1059_2477 446
126 3300048913 Ga0496110_0025541 Ga0496110_0025541_204_1571 446
127 3300049588 Ga0501072_0066429 Ga0501072_0066429_513_1871 446
128 3300049592 Ga0501076_0148219 Ga0501076_0148219_179_1537 446
129 3300049824 Ga0501045_0134291 Ga0501045_0134291_42_1400 446
130 3300050510 nmdc:mga06r32_258648_c1 nmdc:mga06r32_258648_c1_166_1533 446
131 3300054114 Ga0501084_0075407 Ga0501084_0075407_1139_2497 446
132 iso_pu_bacteria 2857729791 2857731184 446
133 iso_pu_bacteria 2905926851 2905928507 446
134 iso_pu_bacteria 2928121344 2928122257 446
135 iso_pu_bacteria 2964326757 2964328002 446
136 3300048924 Ga0496121_0002609 Ga0496121_0002609_17364_18734 447
137 3300006846 Ga0075430_100000510 Ga0075430_1000005109 448
138 3300028800 Ga0265338_10010131 Ga0265338_100101316 448
139 3300031251 Ga0265327_10021572 Ga0265327_100215722 448
140 3300048907 Ga0496104_0117749 Ga0496104_0117749_403_1866 448
141 3300048908 Ga0496105_0047871 Ga0496105_0047871_1880_3343 448
142 3300048916 Ga0496113_0065564 Ga0496113_0065564_345_1742 448
143 3300048922 Ga0496119_0004127 Ga0496119_0004127_1861_3324 448
144 3300048924 Ga0496121_0030769 Ga0496121_0030769_1877_3340 448
145 3300048928 Ga0496125_0045073 Ga0496125_0045073_366_1829 448
146 3300050509 nmdc:mga0qj67_162_c1 nmdc:mga0qj67_162_c1_33861_35237 448
147 3300005329 Ga0070683_100000616 Ga0070683_1000006166 450
148 3300005336 Ga0070680_100068103 Ga0070680_1000681031 450
149 3300005365 Ga0070688_100105341 Ga0070688_1001053411 450
150 3300005435 Ga0070714_100071593 Ga0070714_1000715931 450
151 3300005438 Ga0070701_10052066 Ga0070701_100520662 450
152 3300009094 Ga0111539_10050743 Ga0111539_100507433 450
153 3300013105 Ga0157369_10029320 Ga0157369_100293202 450
154 3300013306 Ga0163162_10149864 Ga0163162_101498642 450
155 3300025898 Ga0207692_10045944 Ga0207692_100459442 450
156 3300025915 Ga0207693_10041958 Ga0207693_100419583 450
157 3300031548 Ga0307408_100112607 Ga0307408_1001126071 450
158 3300032002 Ga0307416_100229967 Ga0307416_1002299672 450
159 3300044694 Ga0466963_0005183 Ga0466963_0005183_2742_4238 450
160 3300049583 Ga0501067_0000018 Ga0501067_0000018_62687_64063 450
161 3300049585 Ga0501069_0000087 Ga0501069_0000087_19907_21283 450
162 3300049586 Ga0501070_0052274 Ga0501070_0052274_1467_2843 450
163 3300049587 Ga0501071_0051065 Ga0501071_0051065_579_1955 450
164 3300061734 Ga0530510_0022548 Ga0530510_0022548_304_1680 450
165 3300050515 nmdc:mga0a205_24116_c1 nmdc:mga0a205_24116_c1_3895_5262 452
166 3300005546 Ga0070696_100067174 Ga0070696_1000671741 459
167 3300004803 Ga0058862_12692499 Ga0058862_126924991 460
168 3300005445 Ga0070708_100194071 Ga0070708_1001940711 460
169 3300005468 Ga0070707_100083951 Ga0070707_1000839512 460
170 3300005471 Ga0070698_100168201 Ga0070698_1001682012 460
171 3300005536 Ga0070697_100014885 Ga0070697_1000148852 460
172 3300025939 Ga0207665_10145824 Ga0207665_101458242 460
173 3300050512 nmdc:mga0n895_252384_c1 nmdc:mga0n895_252384_c1_141_1544 460
174 3300037466 Ga0395898_0183936 Ga0395898_0183936_433_1830 462
175 3300049583 Ga0501067_0004036 Ga0501067_0004036_124_1521 462
176 3300038996 Ga0242420_000621 Ga0242420_000621_1709_3127 463
177 3300002067 JGI24735J21928_10000258 JGI24735J21928_100002584 470
178 3300005563 Ga0068855_100001373 Ga0068855_1000013738 470
179 3300009093 Ga0105240_10048288 Ga0105240_100482882 470
180 3300010375 Ga0105239_10001578 Ga0105239_100015788 470
181 3300013105 Ga0157369_10028129 Ga0157369_100281293 470
182 3300025913 Ga0207695_10035756 Ga0207695_100357562 470
183 3300025949 Ga0207667_10001403 Ga0207667_100014038 470

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00120

Gln-synt_C

Glutamine synthetase, catalytic domain

138

483

0.94

PF03951

Gln-synt_N

Glutamine synthetase, beta-Grasp domain

53

133

0.89

Structural Annotation

Top 5 Hits

ID Description Score Start End
7cql-assembly1.cif.gz_A apo gmas without ligand 0.9545 33 464
7cqw-assembly1.cif.gz_A gmas/adp complex-conformation 1 0.9425 33 467
7cql-assembly1.cif.gz_A apo gmas without ligand 0.9323 33 464
7cqw-assembly1.cif.gz_A gmas/adp complex-conformation 1 0.9275 33 467
8tfk-assembly1.cif.gz_C cryo-em structure of the methanosarcina mazei glutamine synthetase (gs) with met-sox-p and adp 0.9168 27 470
ID Description Score Start End Superfamily
af_P9WN37_2_108_3.10.20.70 Alpha Beta;Roll;Ubiquitin-like (UB roll);Glutamine synthetase, N-terminal domain 0.9216 33 124 3.10.20.70
af_O07752_108_445_3.30.590.10 Alpha Beta;2-Layer Sandwich;Creatine Kinase; Chain A, domain 2;Glutamine synthetase/guanido kinase, catalytic domain 0.9176 122 466 3.30.590.10
af_Q0IX96_508_833_3.30.590.10 Alpha Beta;2-Layer Sandwich;Creatine Kinase; Chain A, domain 2;Glutamine synthetase/guanido kinase, catalytic domain 0.9151 129 455 3.30.590.10
af_O07752_108_445_3.30.590.10 Alpha Beta;2-Layer Sandwich;Creatine Kinase; Chain A, domain 2;Glutamine synthetase/guanido kinase, catalytic domain 0.9124 122 466 3.30.590.10
af_I6X5K1_121_455_3.30.590.10 Alpha Beta;2-Layer Sandwich;Creatine Kinase; Chain A, domain 2;Glutamine synthetase/guanido kinase, catalytic domain 0.908 126 465 3.30.590.10
ID Description Score Start End GO Terms
AF-M7PPC0-F1-model_v4 Glutamine synthetase 0.9883 26 303 GO:0004356
GO:0006542
AF-A0A3B8L2D1-F1-model_v4 Type III glutamate--ammonia ligase 0.9772 26 319 GO:0004356
GO:0006542
AF-A0A6P0R0Y8-F1-model_v4 deleted 0.9638 27 167
AF-A0A1H1G035-F1-model_v4 Gamma-glutamylmethylamide synthetase (Type III glutamate--ammonia ligase (EC 6.3.1.2)) 0.9601 26 470 GO:0004356
GO:0006542
AF-A0A0N8R002-F1-model_v4 Glutamine synthetase, type III 0.9587 26 470 GO:0004356
GO:0006542

Feature Viewer

pLDDT pTM Quality
90.77 0.92 High
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Predicted Structure (AlphaFold2)

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