F281158

General Info

Members Datasets Scaffolds Average Seq Length
183 153 366 336

Family's Representative Sequence

Representative Sequence 3300035242|Ga0373962_0002748|Ga0373962_0002748_1519_2670
Length 383
Sequence LIFWSGFSGALGVSTCPQVEIGGGGRRRERLDSIRGRHQIRWCGEVPPVTVLADRFGRVATDLRVSLTDRCNLRCTYCMPEEGLAWLPRQEQLTDDEVVRLIRVGVERLGITEVRFTGGEPLLRRGLLGIVRATALLEPRPVLMLTTNGIGLERVAVPLREAGLDRINVSLDTLDPERFLALTRRDRHADVLRGLASAASAGLTPVKINTVLMRGINDDEAEALLGFALAYGYQLRFIEQMPLDAQHRWDRHTMVTADEILAALEPFDLRPDTVSRGTAPAETWLVPGYHDAAGEPARVGVIASVTRPFCGDCDRTRLTADGQVRNCLFATDESDLRGLLRSGASDERVAEAWQVAMRGKRAGHGIDDPSFLQPARPMSAIGG

Samples

Sample ID Description Type Environment
1 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
2 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
3 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
4 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
5 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
6 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
7 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
8 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
9 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
10 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
11 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
12 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
13 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
14 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
15 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
16 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
17 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
18 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
19 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
20 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
21 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
22 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
23 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
24 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
25 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
26 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
27 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
28 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
29 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
30 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
31 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
32 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
33 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
34 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
35 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
36 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
37 3300020081 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
38 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
39 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
58 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
59 3300030745 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 8 Metagenome Rhizosphere
60 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
61 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
62 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
63 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
64 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
65 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
66 3300031889 Wild Oat associated soil bacterial communities from Lone Jack Road, Encinitas, CA, USA - WO Metagenome Rhizosphere
67 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
68 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
69 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
70 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
71 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
72 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
73 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
74 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
75 3300035207 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 Metagenome Rhizosphere
76 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
77 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
78 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
79 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
80 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
81 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
82 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
83 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
84 3300042438 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311FE14Z081617_5533 Metagenome Rhizosphere
85 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
86 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
87 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
88 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
89 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
90 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
91 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
92 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
93 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
94 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
95 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
96 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
97 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
98 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
99 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
100 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
101 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
102 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
103 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
104 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
105 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
106 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
107 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
108 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
109 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
110 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
111 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
112 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
113 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
114 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
115 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
116 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
117 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
118 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
119 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
120 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
121 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
122 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
123 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
124 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
125 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
126 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
127 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
128 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
129 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
130 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
131 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
132 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
133 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
134 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
135 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
136 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
137 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
138 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
139 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
140 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
141 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
142 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
143 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
144 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
145 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
146 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
147 2643221615 Nocardioides sp. Root224 Isolate Unclassified
148 2643221657 Nocardioides sp. Root1257 Isolate Unclassified
149 2751185782 Actinoplanes subtropicus NRRL B-24665 Isolate Rhizosphere
150 2795385472 Herbihabitans rhizosphaerae DSM 101727 Isolate Rhizosphere
151 2799112218 Motilibacter rhizosphaerae DSM 45622 Isolate Rhizosphere
152 2990044586 Streptomyces sedi JCM 16909 Isolate Unclassified
153 8056447290 Streptomyces huiliensis SCA2-4 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 95.63
Metatranscriptomes 0.55
Isolates 3.83

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.19
Nodule 0
Rhizoplane 1.09
Rhizosphere 89.07
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0373962_0002748 3300035242 Bacteria 4195
2 Ga0070658_10001838 3300005327 Bacteria 17860
3 Ga0070668_100001464 3300005347 Bacteria 17063
4 Ga0070667_100271553 3300005367 Bacteria 1520
5 Ga0070714_100007920 3300005435 Bacteria 8275
6 Ga0070714_100388191 3300005435 Bacteria 1317
7 Ga0070663_100015668 3300005455 Bacteria 4902
8 Ga0068853_100160039 3300005539 Bacteria 2031
9 Ga0070665_100066805 3300005548 Bacteria 3607
10 Ga0068855_100065442 3300005563 Bacteria 4238
11 Ga0070664_100083502 3300005564 Bacteria 2756
12 Ga0068857_100105540 3300005577 Bacteria 2530
13 Ga0068854_100001436 3300005578 Bacteria 14423
14 Ga0068856_100028020 3300005614 Bacteria 5497
15 Ga0068859_100369754 3300005617 Bacteria 1529
16 Ga0068864_100023829 3300005618 Bacteria 5144
17 Ga0068864_100286550 3300005618 Bacteria 1539
18 Ga0068860_100154830 3300005843 Bacteria 2209
19 Ga0081455_10009965 3300005937 Bacteria 9715
20 Ga0081539_10000070 3300005985 Bacteria 235651
21 Ga0081539_10001984 3300005985 Bacteria 31132
22 Ga0081539_10011157 3300005985 Bacteria 7163
23 Ga0070717_10186975 3300006028 Bacteria 1808
24 Ga0075428_100418560 3300006844 Bacteria 1436
25 Ga0075431_100302747 3300006847 Bacteria 1615
26 Ga0075429_100022423 3300006880 Bacteria 5476
27 Ga0075429_100046009 3300006880 Bacteria 3797
28 Ga0097620_100369737 3300006931 Bacteria 1529
29 Ga0075435_100112152 3300007076 Bacteria 2269
30 Ga0105240_10125487 3300009093 Bacteria 3085
31 Ga0105245_10190141 3300009098 Bacteria 1966
32 Ga0114129_10163780 3300009147 Bacteria 3036
33 Ga0105241_10001534 3300009174 Bacteria 17704
34 Ga0105248_10061799 3300009177 Bacteria 4207
35 Ga0105237_10151053 3300009545 Bacteria 2319
36 Ga0105238_10100221 3300009551 Bacteria 2880
37 Ga0105249_10085995 3300009553 Bacteria 2932
38 Ga0105239_10107861 3300010375 Bacteria 3085
39 Ga0157369_10149855 3300013105 Bacteria 2465
40 Ga0157369_10222864 3300013105 Bacteria 1973
41 Ga0157374_10028654 3300013296 Bacteria 5032
42 Ga0163162_10105353 3300013306 Bacteria 2915
43 Ga0206354_10586889 3300020081 Bacteria 1571
44 Ga0213875_10000303 3300021388 Bacteria 47142
45 Ga0207647_10010516 3300025904 Bacteria 6533
46 Ga0207654_10040778 3300025911 Bacteria 2617
47 Ga0207695_10004442 3300025913 Bacteria 19134
48 Ga0207671_10005994 3300025914 Bacteria 10999
49 Ga0207663_10012689 3300025916 Bacteria 4562
50 Ga0207663_10133971 3300025916 Bacteria 1716
51 Ga0207646_10178366 3300025922 Bacteria 1918
52 Ga0207694_10001603 3300025924 Bacteria 19130
53 Ga0207664_10011446 3300025929 Bacteria 6308
54 Ga0207667_10083437 3300025949 Bacteria 3309
55 Ga0207668_10035546 3300025972 Bacteria 3318
56 Ga0207640_10026218 3300025981 Bacteria 3536
57 Ga0207658_10118946 3300025986 Bacteria 2103
58 Ga0207639_10188154 3300026041 Bacteria 1761
59 Ga0207678_10052523 3300026067 Bacteria 3516
60 Ga0207702_10097737 3300026078 Bacteria 2585
61 Ga0207674_10099827 3300026116 Bacteria 2885
62 Ga0207698_10007126 3300026142 Bacteria 7002
63 Ga0268266_10048438 3300028379 Bacteria 3643
64 Ga0307515_10000454 3300028794 Bacteria 97728
65 Ga0307515_10035451 3300028794 Bacteria 8116
66 Ga0307512_10005903 3300030522 Bacteria 12587
67 Ga0316182_1042494 3300030745 Bacteria 9466
68 Ga0307509_10016356 3300031507 Bacteria 8587
69 Ga0307508_10001533 3300031616 Bacteria 25846
70 Ga0307516_10000528 3300031730 Bacteria 51172
71 Ga0307405_10039997 3300031731 Bacteria 2838
72 Ga0307413_10005782 3300031824 Bacteria 5566
73 Ga0307410_10034058 3300031852 Bacteria 3295
74 Ga0307410_10067120 3300031852 Bacteria 2474
75 Ga0326468_10000127 3300031889 Bacteria 7104
76 Ga0307406_10059925 3300031901 Bacteria 2452
77 Ga0307412_10048209 3300031911 Bacteria 2801
78 Ga0307409_100140921 3300031995 Bacteria 2077
79 Ga0307416_100007563 3300032002 Bacteria 6924
80 Ga0307411_10088076 3300032005 Bacteria 2158
81 Ga0307415_100042630 3300032126 Bacteria 3021
82 Ga0307415_100117432 3300032126 Bacteria 1987
83 Ga0307507_10064230 3300033179 Bacteria 3390
84 Ga0373936_0074279 3300035113 Bacteria 1406
85 Ga0373942_0005923 3300035207 Bacteria 2826
86 Ga0316574_0007597 3300035398 Bacteria 5954
87 Ga0373935_0080312 3300035692 Bacteria 2118
88 Ga0395899_0002344 3300037312 Bacteria 15418
89 Ga0395899_0027171 3300037312 Bacteria 4316
90 Ga0395899_0029119 3300037312 Bacteria 4153
91 Ga0395898_0006137 3300037466 Bacteria 12879
92 Ga0395898_0126721 3300037466 Bacteria 2446
93 Ga0436364_0330965 3300037853 Bacteria 247749
94 Ga0436364_0809663 3300037853 Bacteria 3864
95 Ga0395901_0002372 3300038443 Bacteria 19149
96 Ga0395901_0172864 3300038443 Bacteria 2266
97 Ga0395901_0704381 3300038443 Bacteria 1007
98 Ga0436363_1669369 3300039450 Bacteria 1477
99 Ga0439465_0048965 3300041413 Bacteria 1380
100 Ga0439459_0033314 3300042438 Bacteria 1060
101 Ga0466969_0003921 3300044656 Bacteria 7900
102 Ga0466972_0049874 3300044658 Bacteria 2021
103 Ga0466965_0016935 3300044683 Bacteria 3477
104 Ga0466961_0029288 3300044693 Bacteria 3540
105 Ga0466961_0065050 3300044693 Bacteria 2317
106 Ga0466963_0048190 3300044694 Bacteria 2814
107 Ga0466963_0115630 3300044694 Bacteria 1843
108 Ga0453684_0001212 3300044712 Bacteria 79225
109 Ga0466957_0181186 3300044842 Bacteria 1376
110 Ga0466960_0000493 3300044901 Bacteria 13470
111 Ga0466959_0002069 3300045049 Bacteria 12688
112 Ga0466959_0067615 3300045049 Bacteria 2590
113 Ga0466959_0106931 3300045049 Bacteria 2000
114 Ga0466958_0164191 3300045836 Bacteria 1404
115 Ga0466967_0023892 3300045976 Bacteria 5017
116 Ga0466967_0045680 3300045976 Bacteria 3807
117 Ga0466967_0120809 3300045976 Bacteria 2420
118 Ga0466967_0312981 3300045976 Bacteria 1513
119 Ga0466967_0520099 3300045976 Bacteria 1169
120 Ga0495592_0022125 3300046454 Bacteria 4836
121 Ga0495629_0103313 3300046459 Bacteria 1988
122 Ga0495651_0005062 3300046462 Bacteria 10062
123 Ga0495651_0051144 3300046462 Bacteria 3187
124 Ga0495653_0001671 3300046463 Bacteria 17440
125 Ga0495580_0049598 3300046472 Bacteria 2970
126 Ga0495662_0012103 3300046476 Bacteria 4215
127 Ga0495664_0002397 3300046477 Bacteria 10060
128 Ga0495608_0009463 3300046511 Bacteria 6809
129 Ga0495628_0007014 3300046516 Bacteria 9768
130 Ga0495630_0054152 3300046517 Bacteria 3005
131 Ga0495666_0000269 3300046526 Bacteria 22418
132 Ga0495652_0022919 3300046529 Bacteria 5538
133 Ga0495665_0002899 3300046531 Bacteria 9267
134 Ga0495640_0006977 3300046533 Bacteria 8895
135 Ga0495645_0003265 3300046543 Bacteria 11006
136 Ga0495645_0091227 3300046543 Bacteria 2176
137 Ga0495667_0019283 3300046559 Bacteria 4602
138 Ga0495634_0028252 3300046642 Bacteria 3894
139 Ga0495635_0009351 3300046663 Bacteria 6849
140 Ga0495635_0089160 3300046663 Bacteria 2110
141 Ga0495657_0002872 3300046675 Bacteria 14302
142 Ga0495657_0003519 3300046675 Bacteria 12767
143 Ga0495623_0017801 3300046679 Bacteria 4589
144 Ga0495646_0010428 3300046680 Bacteria 5905
145 Ga0495613_0002329 3300046689 Bacteria 14377
146 Ga0495613_0059885 3300046689 Bacteria 2789
147 Ga0495600_0011393 3300046809 Bacteria 5539
148 Ga0495581_0008270 3300047315 Bacteria 6030
149 Ga0495604_0000216 3300047317 Bacteria 52795
150 Ga0495674_0002673 3300047319 Bacteria 17352
151 Ga0495675_0005811 3300047444 Bacteria 7538
152 Ga0495684_0064698 3300047471 Bacteria 2779
153 Ga0495593_0097567 3300047673 Bacteria 1509
154 Ga0495602_0023919 3300048088 Bacteria 5938
155 Ga0496109_0101558 3300048912 Bacteria 2669
156 Ga0496111_0072820 3300048914 Bacteria 2501
157 Ga0501038_0084834 3300049574 Bacteria 2665
158 Ga0501043_0370083 3300049579 Bacteria 1086
159 Ga0501046_0011193 3300049580 Bacteria 7685
160 Ga0501047_0040319 3300049581 Bacteria 4516
161 Ga0501048_0321245 3300049582 Bacteria 1103
162 Ga0501067_0089713 3300049583 Bacteria 1706
163 Ga0501044_0135457 3300049823 Bacteria 2454
164 nmdc:mga05p37_146067_c1 3300050507 Bacteria 2896
165 nmdc:mga0qj67_18019_c1 3300050509 Bacteria 5379
166 nmdc:mga0qj67_321845_c1 3300050509 Bacteria 1252
167 nmdc:mga0rr50_105240_c1 3300050513 Bacteria 2224
168 nmdc:mga08x19_137911_c1 3300050514 Bacteria 1645
169 Ga0495612_0021889 3300053078 Bacteria 2563
170 Ga0495595_0006052 3300053084 Bacteria 4917
171 Ga0495619_0009983 3300053085 Bacteria 5981
172 Ga0500556_0000676 3300053104 Bacteria 21088
173 Ga0500593_002233 3300053117 Bacteria 7072
174 Ga0500568_0006411 3300053139 Bacteria 5905
175 Ga0500573_0082718 3300053140 Bacteria 1823
176 Ga0466962_0037300 3300061719 Bacteria 2327
177 2644089034 2643221615 Bacteria 5487866
178 2644318879 2643221657 Bacteria 5490246
179 2753269691 2751185782 Bacteria 11227053
180 2795793628 2795385472 Bacteria 6627535
181 2799185978 2799112218 Bacteria 4315149
182 2990044615 2990044586 Bacteria 6603797
183 8056447774 8056447290 Bacteria 7680491
184 Ga0373962_0002748
185 Ga0070658_10001838
186 Ga0070668_100001464
187 Ga0070667_100271553
188 Ga0070714_100007920
189 Ga0070714_100388191
190 Ga0070663_100015668
191 Ga0068853_100160039
192 Ga0070665_100066805
193 Ga0068855_100065442
194 Ga0070664_100083502
195 Ga0068857_100105540
196 Ga0068854_100001436
197 Ga0068856_100028020
198 Ga0068859_100369754
199 Ga0068864_100023829
200 Ga0068864_100286550
201 Ga0068860_100154830
202 Ga0081455_10009965
203 Ga0081539_10000070
204 Ga0081539_10001984
205 Ga0081539_10011157
206 Ga0070717_10186975
207 Ga0075428_100418560
208 Ga0075431_100302747
209 Ga0075429_100022423
210 Ga0075429_100046009
211 Ga0097620_100369737
212 Ga0075435_100112152
213 Ga0105240_10125487
214 Ga0105245_10190141
215 Ga0114129_10163780
216 Ga0105241_10001534
217 Ga0105248_10061799
218 Ga0105237_10151053
219 Ga0105238_10100221
220 Ga0105249_10085995
221 Ga0105239_10107861
222 Ga0157369_10149855
223 Ga0157369_10222864
224 Ga0157374_10028654
225 Ga0163162_10105353
226 Ga0206354_10586889
227 Ga0213875_10000303
228 Ga0207647_10010516
229 Ga0207654_10040778
230 Ga0207695_10004442
231 Ga0207671_10005994
232 Ga0207663_10012689
233 Ga0207663_10133971
234 Ga0207646_10178366
235 Ga0207694_10001603
236 Ga0207664_10011446
237 Ga0207667_10083437
238 Ga0207668_10035546
239 Ga0207640_10026218
240 Ga0207658_10118946
241 Ga0207639_10188154
242 Ga0207678_10052523
243 Ga0207702_10097737
244 Ga0207674_10099827
245 Ga0207698_10007126
246 Ga0268266_10048438
247 Ga0307515_10000454
248 Ga0307515_10035451
249 Ga0307512_10005903
250 Ga0316182_1042494
251 Ga0307509_10016356
252 Ga0307508_10001533
253 Ga0307516_10000528
254 Ga0307405_10039997
255 Ga0307413_10005782
256 Ga0307410_10034058
257 Ga0307410_10067120
258 Ga0326468_10000127
259 Ga0307406_10059925
260 Ga0307412_10048209
261 Ga0307409_100140921
262 Ga0307416_100007563
263 Ga0307411_10088076
264 Ga0307415_100042630
265 Ga0307415_100117432
266 Ga0307507_10064230
267 Ga0373936_0074279
268 Ga0373942_0005923
269 Ga0316574_0007597
270 Ga0373935_0080312
271 Ga0395899_0002344
272 Ga0395899_0027171
273 Ga0395899_0029119
274 Ga0395898_0006137
275 Ga0395898_0126721
276 Ga0436364_0330965
277 Ga0436364_0809663
278 Ga0395901_0002372
279 Ga0395901_0172864
280 Ga0395901_0704381
281 Ga0436363_1669369
282 Ga0439465_0048965
283 Ga0439459_0033314
284 Ga0466969_0003921
285 Ga0466972_0049874
286 Ga0466965_0016935
287 Ga0466961_0029288
288 Ga0466961_0065050
289 Ga0466963_0048190
290 Ga0466963_0115630
291 Ga0453684_0001212
292 Ga0466957_0181186
293 Ga0466960_0000493
294 Ga0466959_0002069
295 Ga0466959_0067615
296 Ga0466959_0106931
297 Ga0466958_0164191
298 Ga0466967_0023892
299 Ga0466967_0045680
300 Ga0466967_0120809
301 Ga0466967_0312981
302 Ga0466967_0520099
303 Ga0495592_0022125
304 Ga0495629_0103313
305 Ga0495651_0005062
306 Ga0495651_0051144
307 Ga0495653_0001671
308 Ga0495580_0049598
309 Ga0495662_0012103
310 Ga0495664_0002397
311 Ga0495608_0009463
312 Ga0495628_0007014
313 Ga0495630_0054152
314 Ga0495666_0000269
315 Ga0495652_0022919
316 Ga0495665_0002899
317 Ga0495640_0006977
318 Ga0495645_0003265
319 Ga0495645_0091227
320 Ga0495667_0019283
321 Ga0495634_0028252
322 Ga0495635_0009351
323 Ga0495635_0089160
324 Ga0495657_0002872
325 Ga0495657_0003519
326 Ga0495623_0017801
327 Ga0495646_0010428
328 Ga0495613_0002329
329 Ga0495613_0059885
330 Ga0495600_0011393
331 Ga0495581_0008270
332 Ga0495604_0000216
333 Ga0495674_0002673
334 Ga0495675_0005811
335 Ga0495684_0064698
336 Ga0495593_0097567
337 Ga0495602_0023919
338 Ga0496109_0101558
339 Ga0496111_0072820
340 Ga0501038_0084834
341 Ga0501043_0370083
342 Ga0501046_0011193
343 Ga0501047_0040319
344 Ga0501048_0321245
345 Ga0501067_0089713
346 Ga0501044_0135457
347 nmdc:mga05p37_146067_c1
348 nmdc:mga0qj67_18019_c1
349 nmdc:mga0qj67_321845_c1
350 nmdc:mga0rr50_105240_c1
351 nmdc:mga08x19_137911_c1
352 Ga0495612_0021889
353 Ga0495595_0006052
354 Ga0495619_0009983
355 Ga0500556_0000676
356 Ga0500593_002233
357 Ga0500568_0006411
358 Ga0500573_0082718
359 Ga0466962_0037300
360 2644089034
361 2644318879
362 2753269691
363 2795793628
364 2799185978
365 2990044615
366 8056447774

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF04055

Radical_SAM

Radical SAM superfamily

65

228

0.98

PF06463

Mob_synth_C

Molybdenum Cofactor Synthesis C

233

366

0.92

PF13353

Fer4_12

4Fe-4S single cluster domain

62

174

0.74

Structural Annotation

Top 5 Hits

ID Description Score Start End
1tv8-assembly1.cif.gz_A structure of moaa in complex with s-adenosylmethionine 0.9262 2 295
2fb2-assembly1.cif.gz_B structure of the moaa arg17/266/268/ala triple mutant 0.9256 1 295
2fb2-assembly1.cif.gz_B structure of the moaa arg17/266/268/ala triple mutant 0.8539 1 295
1tv8-assembly1.cif.gz_A structure of moaa in complex with s-adenosylmethionine 0.852 2 295
7tol-assembly1.cif.gz_A x-ray crystal structure of glycerol dibiphytanyl glycerol tetraether - macrocyclic archaeol synthase (gdgt-mas) from methanocaldococcus jannaschii with archaeal lipid, 5'deoxyadenosine, and methionine bound 0.8341 7 209
ID Description Score Start End Superfamily
af_P9WJS1_27_360_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9698 2 320 3.20.20.70
af_P9WJS1_27_360_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9638 2 320 3.20.20.70
af_P9WJS3_16_359_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9362 2 320 3.20.20.70
af_I1KTQ5_72_400_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9346 2 320 3.20.20.70
af_P9WJS3_16_359_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9305 2 320 3.20.20.70
ID Description Score Start End GO Terms
AF-A0A512D4E7-F1-model_v4 GTP 3',8-cyclase (EC 4.1.99.22) (Molybdenum cofactor biosynthesis protein A) 0.9844 2 320 GO:0005525
GO:0006777
GO:0046872
GO:0051539
GO:0061798
GO:0061799
GO:1904047
AF-A0A7W0ID98-F1-model_v4 GTP 3',8-cyclase (EC 4.1.99.22) (Molybdenum cofactor biosynthesis protein A) 0.9827 2 320 GO:0005525
GO:0006777
GO:0046872
GO:0051539
GO:0061798
GO:0061799
GO:1904047
AF-A0A3M2LB62-F1-model_v4 GTP 3',8-cyclase (EC 4.1.99.22) (Molybdenum cofactor biosynthesis protein A) 0.9816 1 320 GO:0005525
GO:0006777
GO:0046872
GO:0051539
GO:0061798
GO:0061799
GO:1904047
AF-A0A6H1A2P6-F1-model_v4 GTP 3',8-cyclase (EC 4.1.99.22) (Molybdenum cofactor biosynthesis protein A) 0.9806 2 320 GO:0005525
GO:0006777
GO:0046872
GO:0051539
GO:0061798
GO:0061799
GO:1904047
AF-A0A368VPE5-F1-model_v4 GTP 3',8-cyclase (EC 4.1.99.22) (Molybdenum cofactor biosynthesis protein A) 0.9802 2 320 GO:0005525
GO:0006777
GO:0046872
GO:0051539
GO:0061798
GO:0061799
GO:1904047

Map