F280891
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 183 | 129 | 182 | 383 |
Family's Representative Sequence
| Representative Sequence | 3300014326|Ga0157380_10003824|Ga0157380_100038246 |
| Length | 393 |
| Sequence | MSERPTNKSTAIDNHRPTWAEIDLDALAHNFQIVRERVGPGVKVMGVVKADAYGHGAVECAHRLGAEGSDWFGVATPEEGIELRESGLTQPTLCLGGFWAGQESACVQHHLVPLIYRLDMLESLDQAAADAGVVADVHLKIDTGMGRLGFRFDRINELIDRIGNFKHIRIDGLMTHLAAADDHSCEPLTNKQVERFESAVSAFHEHGIAPEHLHLSNSAGIFDQPAARGTMVRPGGVLYGLWRDVLDPTREHQVSFKPVMSLRSRISLLKLVPAGETIGYGCTFEASRPTLVATLPIGYHDGYMRGLSNRGRVIVRGSYASVIGRVSMDLTLIDVTDVPEVALGDVVTLLGTDGKHSVTAEDLARIAGTISYELTCGISSRVPRLHKNGPSLS |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 2162886006 | Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v1 | Metagenome | Rhizosphere |
| 2 | 2162886011 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v2 (version 2) | Metagenome | Rhizosphere |
| 3 | 3300000532 | Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - CNA_Illumina_Assembled | Metagenome | Rhizosphere |
| 4 | 3300003203 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 | Metagenome | Rhizosphere |
| 5 | 3300005288 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) | Metagenome | Rhizosphere |
| 6 | 3300005289 | Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) | Metagenome | Rhizosphere |
| 7 | 3300005290 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) | Metagenome | Rhizosphere |
| 8 | 3300005293 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) | Metagenome | Rhizosphere |
| 9 | 3300005295 | Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) | Metagenome | Rhizosphere |
| 10 | 3300005327 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG | Metagenome | Rhizosphere |
| 11 | 3300005328 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG | Metagenome | Rhizosphere |
| 12 | 3300005330 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG | Metagenome | Rhizosphere |
| 13 | 3300005331 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG | Metagenome | Rhizosphere |
| 14 | 3300005334 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 | Metagenome | Rhizosphere |
| 15 | 3300005336 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG | Metagenome | Rhizosphere |
| 16 | 3300005338 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 | Metagenome | Rhizosphere |
| 17 | 3300005343 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG | Metagenome | Rhizosphere |
| 18 | 3300005355 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG | Metagenome | Rhizosphere |
| 19 | 3300005365 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG | Metagenome | Rhizosphere |
| 20 | 3300005366 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG | Metagenome | Rhizosphere |
| 21 | 3300005367 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG | Metagenome | Rhizosphere |
| 22 | 3300005438 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG | Metagenome | Rhizosphere |
| 23 | 3300005441 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG | Metagenome | Rhizosphere |
| 24 | 3300005444 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG | Metagenome | Rhizosphere |
| 25 | 3300005456 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG | Metagenome | Rhizosphere |
| 26 | 3300005457 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG | Metagenome | Rhizosphere |
| 27 | 3300005458 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG | Metagenome | Rhizosphere |
| 28 | 3300005459 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 | Metagenome | Rhizosphere |
| 29 | 3300005467 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG | Metagenome | Rhizosphere |
| 30 | 3300005471 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG | Metagenome | Rhizosphere |
| 31 | 3300005518 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG | Metagenome | Rhizosphere |
| 32 | 3300005530 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG | Metagenome | Rhizosphere |
| 33 | 3300005539 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 | Metagenome | Rhizosphere |
| 34 | 3300005543 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG | Metagenome | Rhizosphere |
| 35 | 3300005544 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG | Metagenome | Rhizosphere |
| 36 | 3300005545 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG | Metagenome | Rhizosphere |
| 37 | 3300005563 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 | Metagenome | Rhizosphere |
| 38 | 3300005577 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 | Metagenome | Rhizosphere |
| 39 | 3300005615 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG | Metagenome | Rhizosphere |
| 40 | 3300005617 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 | Metagenome | Rhizosphere |
| 41 | 3300005618 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 | Metagenome | Rhizosphere |
| 42 | 3300005718 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 | Metagenome | Rhizosphere |
| 43 | 3300005840 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 | Metagenome | Rhizosphere |
| 44 | 3300005842 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 | Metagenome | Rhizosphere |
| 45 | 3300005843 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 | Metagenome | Rhizosphere |
| 46 | 3300005844 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 | Metagenome | Rhizosphere |
| 47 | 3300005985 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 | Metagenome | Rhizosphere |
| 48 | 3300006358 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 | Metagenome | Rhizosphere |
| 49 | 3300006844 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 | Metagenome | Rhizosphere |
| 50 | 3300006846 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 | Metagenome | Rhizosphere |
| 51 | 3300006847 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 | Metagenome | Rhizosphere |
| 52 | 3300006852 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 | Metagenome | Rhizosphere |
| 53 | 3300006880 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 | Metagenome | Rhizosphere |
| 54 | 3300006881 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 | Metagenome | Rhizosphere |
| 55 | 3300006931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 56 | 3300007076 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 | Metagenome | Rhizosphere |
| 57 | 3300007265 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 | Metagenome | Rhizosphere |
| 58 | 3300009011 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG | Metagenome | Rhizosphere |
| 59 | 3300009093 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG | Metagenome | Rhizosphere |
| 60 | 3300009094 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 61 | 3300009147 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 62 | 3300009148 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG | Metagenome | Rhizosphere |
| 63 | 3300009174 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG | Metagenome | Rhizosphere |
| 64 | 3300009176 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG | Metagenome | Rhizosphere |
| 65 | 3300009177 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG | Metagenome | Rhizosphere |
| 66 | 3300009545 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG | Metagenome | Rhizosphere |
| 67 | 3300010375 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG | Metagenome | Rhizosphere |
| 68 | 3300011119 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG | Metagenome | Rhizosphere |
| 69 | 3300013297 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG | Metagenome | Rhizosphere |
| 70 | 3300013307 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG | Metagenome | Rhizosphere |
| 71 | 3300013308 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG | Metagenome | Rhizosphere |
| 72 | 3300014325 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG | Metagenome | Rhizosphere |
| 73 | 3300014326 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG | Metagenome | Rhizosphere |
| 74 | 3300014745 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG | Metagenome | Rhizosphere |
| 75 | 3300014968 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG | Metagenome | Rhizosphere |
| 76 | 3300014969 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG | Metagenome | Rhizosphere |
| 77 | 3300017792 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG | Metagenome | Rhizosphere |
| 78 | 3300021384 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 | Metagenome | Unclassified |
| 79 | 3300025899 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 80 | 3300025904 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 81 | 3300025908 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 82 | 3300025909 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 83 | 3300025910 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 84 | 3300025912 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 85 | 3300025914 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 86 | 3300025917 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 87 | 3300025918 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 88 | 3300025921 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 89 | 3300025923 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 90 | 3300025925 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 91 | 3300025931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 92 | 3300025935 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 93 | 3300025938 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 94 | 3300025940 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 95 | 3300025941 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 96 | 3300025942 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 97 | 3300025960 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 98 | 3300026035 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 99 | 3300026041 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 100 | 3300026088 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 101 | 3300026089 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 102 | 3300026095 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 103 | 3300026116 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 104 | 3300027907 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) | Metagenome | Rhizosphere |
| 105 | 3300028381 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 106 | 3300031240 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG | Metagenome | Rhizosphere |
| 107 | 3300031727 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 | Metagenome | Rhizosphere |
| 108 | 3300035207 | Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 | Metagenome | Rhizosphere |
| 109 | 3300037471 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 | Metagenome | Rhizosphere |
| 110 | 3300038996 | Genetically engineered switchgrass root microbial communities from Knoxville, USA - plot19 | Metagenome | Rhizosphere |
| 111 | 3300039437 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 | Metagenome | Unclassified |
| 112 | 3300042435 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 | Metagenome | Rhizosphere |
| 113 | 3300042876 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED | Metagenome | Rhizosphere |
| 114 | 3300044673 | Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED | Metagenome | Rhizosphere |
| 115 | 3300044712 | Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED | Metagenome | Rhizosphere |
| 116 | 3300045051 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED | Metagenome | Rhizosphere |
| 117 | 3300048907 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 | Metagenome | Rhizoplane |
| 118 | 3300048911 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled | Metagenome | Rhizoplane |
| 119 | 3300048915 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 | Metagenome | Rhizoplane |
| 120 | 3300049664 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B5_A_2_drought | Metagenome | Rhizosphere |
| 121 | 3300049705 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought | Metagenome | Rhizosphere |
| 122 | 3300050507 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation | Metagenome | Rhizosphere |
| 123 | 3300050508 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation | Metagenome | Rhizosphere |
| 124 | 3300050509 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation | Metagenome | Rhizosphere |
| 125 | 3300050511 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation | Metagenome | Rhizosphere |
| 126 | 3300050512 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation | Metagenome | Rhizosphere |
| 127 | 3300050513 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation | Metagenome | Rhizosphere |
| 128 | 3300050515 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation | Metagenome | Rhizosphere |
| 129 | 8054002106 | Azospirillum lipoferum 59b | Isolate | Unclassified |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 99.45 |
| Metatranscriptomes | 0 |
| Isolates | 0.55 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 0 |
| Nodule | 0 |
| Rhizoplane | 1.64 |
| Rhizosphere | 95.63 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 2.73 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | SwRhRL3b_contig_2779684 | 2162886006 | Bacteria | 3191 |
| 2 | MRS1b_contig_224522 | 2162886011 | Unclassified | 4131 |
| 3 | CNAas_1000608 | 3300000532 | Unclassified | 3463 |
| 4 | JGI25406J46586_10002557 | 3300003203 | Bacteria | 8603 |
| 5 | Ga0065714_10065325 | 3300005288 | Bacteria | 10908 |
| 6 | Ga0065704_10071785 | 3300005289 | Bacteria | 9933 |
| 7 | Ga0065712_10006704 | 3300005290 | Bacteria | 3548 |
| 8 | Ga0065712_10011717 | 3300005290 | Bacteria | 1972 |
| 9 | Ga0065712_10068401 | 3300005290 | Bacteria | 10913 |
| 10 | Ga0065715_10094670 | 3300005293 | Bacteria | 4273 |
| 11 | Ga0065715_10146858 | 3300005293 | Bacteria | 1778 |
| 12 | Ga0065707_10000960 | 3300005295 | Bacteria | 10503 |
| 13 | Ga0070658_10007336 | 3300005327 | Bacteria | 8903 |
| 14 | Ga0070676_10073296 | 3300005328 | Unclassified | 2060 |
| 15 | Ga0070690_100003010 | 3300005330 | Bacteria | 9133 |
| 16 | Ga0070670_100039371 | 3300005331 | Bacteria | 4065 |
| 17 | Ga0068869_100020085 | 3300005334 | Unclassified | 4575 |
| 18 | Ga0068869_100085391 | 3300005334 | Bacteria | 2364 |
| 19 | Ga0070680_100002363 | 3300005336 | Bacteria | 13941 |
| 20 | Ga0070680_100043011 | 3300005336 | Unclassified | 3668 |
| 21 | Ga0068868_100020437 | 3300005338 | Unclassified | 4975 |
| 22 | Ga0070687_100024999 | 3300005343 | Bacteria | 2860 |
| 23 | Ga0070687_100114718 | 3300005343 | Bacteria | 1531 |
| 24 | Ga0070671_100001483 | 3300005355 | Bacteria | 17524 |
| 25 | Ga0070688_100009429 | 3300005365 | Bacteria | 5338 |
| 26 | Ga0070659_100115233 | 3300005366 | Bacteria | 2172 |
| 27 | Ga0070667_100112584 | 3300005367 | Unclassified | 2361 |
| 28 | Ga0070701_10041883 | 3300005438 | Bacteria | 2335 |
| 29 | Ga0070701_10062444 | 3300005438 | Bacteria | 1968 |
| 30 | Ga0070700_100046725 | 3300005441 | Bacteria | 2676 |
| 31 | Ga0070694_100027841 | 3300005444 | Bacteria | 3674 |
| 32 | Ga0070694_100087103 | 3300005444 | Unclassified | 2184 |
| 33 | Ga0070678_100061197 | 3300005456 | Unclassified | 2774 |
| 34 | Ga0070662_100089025 | 3300005457 | Bacteria | 2315 |
| 35 | Ga0070681_10001239 | 3300005458 | Bacteria | 22228 |
| 36 | Ga0068867_100016294 | 3300005459 | Bacteria | 5278 |
| 37 | Ga0070706_100060206 | 3300005467 | Bacteria | 3505 |
| 38 | Ga0070698_100089101 | 3300005471 | Bacteria | 3069 |
| 39 | Ga0070698_100137166 | 3300005471 | Bacteria | 2400 |
| 40 | Ga0070699_100156727 | 3300005518 | Bacteria | 2015 |
| 41 | Ga0070679_100005621 | 3300005530 | Bacteria | 11612 |
| 42 | Ga0068853_100004925 | 3300005539 | Bacteria | 10395 |
| 43 | Ga0068853_100102439 | 3300005539 | Bacteria | 2533 |
| 44 | Ga0068853_100215158 | 3300005539 | Bacteria | 1753 |
| 45 | Ga0070672_100043849 | 3300005543 | Unclassified | 3452 |
| 46 | Ga0070686_100013033 | 3300005544 | Bacteria | 4747 |
| 47 | Ga0070695_100022598 | 3300005545 | Bacteria | 3859 |
| 48 | Ga0068855_100279683 | 3300005563 | Bacteria | 1853 |
| 49 | Ga0068857_100039245 | 3300005577 | Bacteria | 4194 |
| 50 | Ga0070702_100058982 | 3300005615 | Bacteria | 2225 |
| 51 | Ga0068859_100009641 | 3300005617 | Bacteria | 9748 |
| 52 | Ga0068864_100029322 | 3300005618 | Unclassified | 4658 |
| 53 | Ga0068864_100291328 | 3300005618 | Bacteria | 1526 |
| 54 | Ga0068866_10004266 | 3300005718 | Bacteria | 5871 |
| 55 | Ga0068870_10010022 | 3300005840 | Unclassified | 4334 |
| 56 | Ga0068858_100037567 | 3300005842 | Unclassified | 4491 |
| 57 | Ga0068858_100131719 | 3300005842 | Unclassified | 2345 |
| 58 | Ga0068860_100043342 | 3300005843 | Unclassified | 4293 |
| 59 | Ga0068862_100040243 | 3300005844 | Unclassified | 3973 |
| 60 | Ga0081539_10000407 | 3300005985 | Bacteria | 91696 |
| 61 | Ga0081539_10000814 | 3300005985 | Bacteria | 60530 |
| 62 | Ga0068871_100059428 | 3300006358 | Bacteria | 3115 |
| 63 | Ga0075428_100063197 | 3300006844 | Bacteria | 4053 |
| 64 | Ga0075430_100027962 | 3300006846 | Bacteria | 4790 |
| 65 | Ga0075431_100017911 | 3300006847 | Bacteria | 7205 |
| 66 | Ga0075433_10001603 | 3300006852 | Bacteria | 16763 |
| 67 | Ga0075429_100041653 | 3300006880 | Unclassified | 3999 |
| 68 | Ga0068865_100005469 | 3300006881 | Bacteria | 7706 |
| 69 | Ga0097620_100009642 | 3300006931 | Bacteria | 9748 |
| 70 | Ga0075435_100010210 | 3300007076 | Bacteria | 6860 |
| 71 | Ga0099794_10001392 | 3300007265 | Bacteria | 8433 |
| 72 | Ga0105251_10041202 | 3300009011 | Bacteria | 2249 |
| 73 | Ga0105240_10065949 | 3300009093 | Unclassified | 4493 |
| 74 | Ga0111539_10001336 | 3300009094 | Bacteria | 32835 |
| 75 | Ga0111539_10024242 | 3300009094 | Bacteria | 7450 |
| 76 | Ga0111539_10064050 | 3300009094 | Bacteria | 4350 |
| 77 | Ga0114129_10011837 | 3300009147 | Bacteria | 12409 |
| 78 | Ga0114129_10106571 | 3300009147 | Bacteria | 3871 |
| 79 | Ga0114129_10187757 | 3300009147 | Unclassified | 2808 |
| 80 | Ga0114129_10398770 | 3300009147 | Bacteria | 1813 |
| 81 | Ga0105243_10012403 | 3300009148 | Bacteria | 6443 |
| 82 | Ga0105241_10031115 | 3300009174 | Unclassified | 3994 |
| 83 | Ga0105241_10234354 | 3300009174 | Bacteria | 1549 |
| 84 | Ga0105242_10007895 | 3300009176 | Bacteria | 8190 |
| 85 | Ga0105248_10012712 | 3300009177 | Bacteria | 9289 |
| 86 | Ga0105248_10053667 | 3300009177 | Bacteria | 4522 |
| 87 | Ga0105237_10012303 | 3300009545 | Bacteria | 9017 |
| 88 | Ga0105239_10057254 | 3300010375 | Bacteria | 4275 |
| 89 | Ga0105239_10103288 | 3300010375 | Bacteria | 3154 |
| 90 | Ga0105239_10104926 | 3300010375 | Unclassified | 3129 |
| 91 | Ga0105239_10416876 | 3300010375 | Bacteria | 1521 |
| 92 | Ga0105246_10297351 | 3300011119 | Bacteria | 1302 |
| 93 | Ga0157378_10002886 | 3300013297 | Bacteria | 15303 |
| 94 | Ga0157378_10011080 | 3300013297 | Bacteria | 7892 |
| 95 | Ga0157378_10235802 | 3300013297 | Bacteria | 1746 |
| 96 | Ga0157372_10030042 | 3300013307 | Bacteria | 5942 |
| 97 | Ga0157372_10032007 | 3300013307 | Bacteria | 5763 |
| 98 | Ga0157375_10057123 | 3300013308 | Unclassified | 3857 |
| 99 | Ga0163163_10019545 | 3300014325 | Bacteria | 6363 |
| 100 | Ga0163163_10091498 | 3300014325 | Unclassified | 3056 |
| 101 | Ga0157380_10003824 | 3300014326 | Bacteria | 10368 |
| 102 | Ga0157377_10011704 | 3300014745 | Bacteria | 4387 |
| 103 | Ga0157379_10095980 | 3300014968 | Bacteria | 2661 |
| 104 | Ga0157376_10105654 | 3300014969 | Bacteria | 2469 |
| 105 | Ga0163161_10013456 | 3300017792 | Bacteria | 5694 |
| 106 | Ga0213876_10000156 | 3300021384 | Bacteria | 71972 |
| 107 | Ga0213876_10000219 | 3300021384 | Bacteria | 57264 |
| 108 | Ga0207642_10029868 | 3300025899 | Bacteria | 2263 |
| 109 | Ga0207647_10090641 | 3300025904 | Bacteria | 1823 |
| 110 | Ga0207643_10019117 | 3300025908 | Unclassified | 3754 |
| 111 | Ga0207705_10021087 | 3300025909 | Bacteria | 4647 |
| 112 | Ga0207684_10077936 | 3300025910 | Bacteria | 2819 |
| 113 | Ga0207707_10000022 | 3300025912 | Bacteria | 198808 |
| 114 | Ga0207671_10021528 | 3300025914 | Unclassified | 4888 |
| 115 | Ga0207660_10000065 | 3300025917 | Bacteria | 55387 |
| 116 | Ga0207660_10028351 | 3300025917 | Unclassified | 3829 |
| 117 | Ga0207662_10007071 | 3300025918 | Bacteria | 6094 |
| 118 | Ga0207652_10002734 | 3300025921 | Bacteria | 14805 |
| 119 | Ga0207681_10049479 | 3300025923 | Unclassified | 2841 |
| 120 | Ga0207650_10096546 | 3300025925 | Bacteria | 2267 |
| 121 | Ga0207644_10004759 | 3300025931 | Bacteria | 8826 |
| 122 | Ga0207709_10075716 | 3300025935 | Bacteria | 2152 |
| 123 | Ga0207704_10057570 | 3300025938 | Bacteria | 2388 |
| 124 | Ga0207691_10002711 | 3300025940 | Bacteria | 17294 |
| 125 | Ga0207711_10008231 | 3300025941 | Bacteria | 8730 |
| 126 | Ga0207711_10029559 | 3300025941 | Bacteria | 4624 |
| 127 | Ga0207689_10003053 | 3300025942 | Bacteria | 15416 |
| 128 | Ga0207689_10016170 | 3300025942 | Bacteria | 6320 |
| 129 | Ga0207651_10036408 | 3300025960 | Unclassified | 3212 |
| 130 | Ga0207703_10159668 | 3300026035 | Unclassified | 1973 |
| 131 | Ga0207639_10059354 | 3300026041 | Bacteria | 2946 |
| 132 | Ga0207639_10103258 | 3300026041 | Bacteria | 2309 |
| 133 | Ga0207641_10024394 | 3300026088 | Unclassified | 4985 |
| 134 | Ga0207648_10003569 | 3300026089 | Bacteria | 16272 |
| 135 | Ga0207648_10166066 | 3300026089 | Unclassified | 1950 |
| 136 | Ga0207676_10003190 | 3300026095 | Bacteria | 11679 |
| 137 | Ga0207674_10205643 | 3300026116 | Bacteria | 1918 |
| 138 | Ga0207428_10065373 | 3300027907 | Bacteria | 2869 |
| 139 | Ga0207428_10176832 | 3300027907 | Bacteria | 1614 |
| 140 | Ga0268264_10206289 | 3300028381 | Bacteria | 1801 |
| 141 | Ga0265320_10016963 | 3300031240 | Bacteria | 4059 |
| 142 | Ga0316576_10053243 | 3300031727 | Bacteria | 2949 |
| 143 | Ga0373942_0007321 | 3300035207 | Bacteria | 2559 |
| 144 | Ga0395905_0004483 | 3300037471 | Bacteria | 14486 |
| 145 | Ga0242420_001602 | 3300038996 | Unclassified | 3061 |
| 146 | Ga0436365_0227208 | 3300039437 | Bacteria | 70252 |
| 147 | Ga0436365_1695306 | 3300039437 | Bacteria | 69740 |
| 148 | Ga0439434_0052755 | 3300042435 | Unclassified | 1263 |
| 149 | Ga0451577_0000560 | 3300042876 | Bacteria | 60734 |
| 150 | Ga0451577_0002257 | 3300042876 | Bacteria | 23390 |
| 151 | Ga0451577_0023310 | 3300042876 | Bacteria | 5646 |
| 152 | Ga0451577_0037143 | 3300042876 | Bacteria | 4385 |
| 153 | Ga0453683_0000018 | 3300044673 | Bacteria | 309212 |
| 154 | Ga0453683_0000586 | 3300044673 | Bacteria | 40377 |
| 155 | Ga0453683_0000799 | 3300044673 | Bacteria | 30907 |
| 156 | Ga0453683_0034909 | 3300044673 | Bacteria | 3170 |
| 157 | Ga0453684_0000254 | 3300044712 | Bacteria | 229888 |
| 158 | Ga0453684_0001216 | 3300044712 | Bacteria | 79021 |
| 159 | Ga0453684_0038614 | 3300044712 | Bacteria | 6523 |
| 160 | Ga0453684_0104579 | 3300044712 | Bacteria | 3455 |
| 161 | Ga0451576_0000271 | 3300045051 | Bacteria | 126815 |
| 162 | Ga0451576_0087680 | 3300045051 | Bacteria | 3237 |
| 163 | Ga0451576_0154422 | 3300045051 | Bacteria | 2394 |
| 164 | Ga0451576_0517389 | 3300045051 | Bacteria | 1254 |
| 165 | Ga0496104_0216811 | 3300048907 | Bacteria | 1826 |
| 166 | Ga0496108_0016157 | 3300048911 | Bacteria | 6086 |
| 167 | Ga0496112_0176566 | 3300048915 | Bacteria | 2101 |
| 168 | Ga0501224_002390 | 3300049664 | Bacteria | 2548 |
| 169 | Ga0501225_0005224 | 3300049705 | Unclassified | 3822 |
| 170 | nmdc:mga05p37_200435_c1 | 3300050507 | Bacteria | 2418 |
| 171 | nmdc:mga05p37_423665_c1 | 3300050507 | Bacteria | 1548 |
| 172 | nmdc:mga05p37_78680_c1 | 3300050507 | Bacteria | 4060 |
| 173 | nmdc:mga09592_260646_c1 | 3300050508 | Bacteria | 1503 |
| 174 | nmdc:mga0qj67_21226_c1 | 3300050509 | Bacteria | 4981 |
| 175 | nmdc:mga08y16_1383_c1 | 3300050511 | Bacteria | 24251 |
| 176 | nmdc:mga08y16_418111_c1 | 3300050511 | Bacteria | 1370 |
| 177 | nmdc:mga08y16_5057_c1 | 3300050511 | Bacteria | 13780 |
| 178 | nmdc:mga08y16_51381_c1 | 3300050511 | Bacteria | 4313 |
| 179 | nmdc:mga0n895_298585_c1 | 3300050512 | Unclassified | 1633 |
| 180 | nmdc:mga0rr50_22507_c1 | 3300050513 | Unclassified | 4327 |
| 181 | nmdc:mga0a205_202687_c1 | 3300050515 | Bacteria | 1874 |
| 182 | nmdc:mga0a205_33103_c1 | 3300050515 | Unclassified | 4957 |
Family Sequences
| Sample | Scaffold | Protein | Protein Length | |
|---|---|---|---|---|
| 1 | 3300042435 | Ga0439434_0052755 | Ga0439434_0052755_242_1222 | 319 |
| 2 | 3300025904 | Ga0207647_10090641 | Ga0207647_100906412 | 324 |
| 3 | 3300025909 | Ga0207705_10021087 | Ga0207705_100210877 | 330 |
| 4 | 3300026041 | Ga0207639_10103258 | Ga0207639_101032584 | 330 |
| 5 | 3300048907 | Ga0496104_0216811 | Ga0496104_0216811_52_1089 | 338 |
| 6 | 3300050507 | nmdc:mga05p37_423665_c1 | nmdc:mga05p37_423665_c1_462_1499 | 338 |
| 7 | 3300005327 | Ga0070658_10007336 | Ga0070658_100073369 | 341 |
| 8 | 3300005539 | Ga0068853_100102439 | Ga0068853_1001024393 | 348 |
| 9 | 3300026116 | Ga0207674_10205643 | Ga0207674_102056432 | 355 |
| 10 | 3300044673 | Ga0453683_0000586 | Ga0453683_0000586_21388_22539 | 355 |
| 11 | iso_pu_bacteria | 8054002106 | 8054005681 | 360 |
| 12 | 3300005563 | Ga0068855_100279683 | Ga0068855_1002796832 | 362 |
| 13 | 3300005577 | Ga0068857_100039245 | Ga0068857_1000392452 | 362 |
| 14 | 3300026041 | Ga0207639_10059354 | Ga0207639_100593542 | 362 |
| 15 | 3300031727 | Ga0316576_10053243 | Ga0316576_100532433 | 362 |
| 16 | 3300005842 | Ga0068858_100131719 | Ga0068858_1001317192 | 363 |
| 17 | 3300009545 | Ga0105237_10012303 | Ga0105237_100123039 | 363 |
| 18 | 3300025914 | Ga0207671_10021528 | Ga0207671_100215283 | 363 |
| 19 | 3300026035 | Ga0207703_10159668 | Ga0207703_101596682 | 363 |
| 20 | 3300042876 | Ga0451577_0000560 | Ga0451577_0000560_7429_8541 | 363 |
| 21 | 3300044673 | Ga0453683_0000799 | Ga0453683_0000799_15261_16373 | 363 |
| 22 | 3300044712 | Ga0453684_0001216 | Ga0453684_0001216_51555_52667 | 363 |
| 23 | 3300045051 | Ga0451576_0087680 | Ga0451576_0087680_1272_2384 | 363 |
| 24 | 3300031240 | Ga0265320_10016963 | Ga0265320_100169633 | 366 |
| 25 | 3300042876 | Ga0451577_0023310 | Ga0451577_0023310_1547_2680 | 367 |
| 26 | 3300042876 | Ga0451577_0037143 | Ga0451577_0037143_103_1236 | 367 |
| 27 | 3300044673 | Ga0453683_0000018 | Ga0453683_0000018_62393_63526 | 367 |
| 28 | 3300044712 | Ga0453684_0038614 | Ga0453684_0038614_2404_3537 | 367 |
| 29 | 3300044712 | Ga0453684_0104579 | Ga0453684_0104579_834_1967 | 367 |
| 30 | 3300045051 | Ga0451576_0000271 | Ga0451576_0000271_101680_102813 | 367 |
| 31 | 3300045051 | Ga0451576_0154422 | Ga0451576_0154422_281_1414 | 367 |
| 32 | 3300005539 | Ga0068853_100004925 | Ga0068853_1000049257 | 374 |
| 33 | 3300005444 | Ga0070694_100027841 | Ga0070694_1000278413 | 375 |
| 34 | 3300037471 | Ga0395905_0004483 | Ga0395905_0004483_10221_11366 | 375 |
| 35 | 3300044673 | Ga0453683_0034909 | Ga0453683_0034909_484_1641 | 375 |
| 36 | 3300005471 | Ga0070698_100137166 | Ga0070698_1001371662 | 376 |
| 37 | 3300005985 | Ga0081539_10000814 | Ga0081539_1000081428 | 376 |
| 38 | 3300006847 | Ga0075431_100017911 | Ga0075431_1000179116 | 376 |
| 39 | 3300007265 | Ga0099794_10001392 | Ga0099794_100013924 | 376 |
| 40 | 3300009147 | Ga0114129_10106571 | Ga0114129_101065712 | 376 |
| 41 | 3300021384 | Ga0213876_10000156 | Ga0213876_100001568 | 376 |
| 42 | 3300039437 | Ga0436365_1695306 | Ga0436365_1695306_7866_9014 | 376 |
| 43 | 3300042876 | Ga0451577_0002257 | Ga0451577_0002257_21666_22880 | 376 |
| 44 | 3300044712 | Ga0453684_0000254 | Ga0453684_0000254_6199_7413 | 376 |
| 45 | 3300050507 | nmdc:mga05p37_78680_c1 | nmdc:mga05p37_78680_c1_1854_3008 | 376 |
| 46 | 3300005467 | Ga0070706_100060206 | Ga0070706_1000602062 | 377 |
| 47 | 3300006844 | Ga0075428_100063197 | Ga0075428_1000631973 | 377 |
| 48 | 3300009093 | Ga0105240_10065949 | Ga0105240_100659493 | 377 |
| 49 | 3300009147 | Ga0114129_10011837 | Ga0114129_100118374 | 377 |
| 50 | 3300010375 | Ga0105239_10103288 | Ga0105239_101032882 | 377 |
| 51 | 3300013307 | Ga0157372_10032007 | Ga0157372_100320073 | 377 |
| 52 | 3300025910 | Ga0207684_10077936 | Ga0207684_100779362 | 377 |
| 53 | 3300049664 | Ga0501224_002390 | Ga0501224_002390_380_1528 | 377 |
| 54 | 3300049705 | Ga0501225_0005224 | Ga0501225_0005224_959_2107 | 377 |
| 55 | 3300050507 | nmdc:mga05p37_200435_c1 | nmdc:mga05p37_200435_c1_513_1661 | 377 |
| 56 | 3300050511 | nmdc:mga08y16_418111_c1 | nmdc:mga08y16_418111_c1_122_1270 | 377 |
| 57 | 3300003203 | JGI25406J46586_10002557 | JGI25406J46586_100025574 | 378 |
| 58 | 3300005293 | Ga0065715_10146858 | Ga0065715_101468582 | 378 |
| 59 | 3300005330 | Ga0070690_100003010 | Ga0070690_1000030103 | 378 |
| 60 | 3300005331 | Ga0070670_100039371 | Ga0070670_1000393712 | 378 |
| 61 | 3300005343 | Ga0070687_100024999 | Ga0070687_1000249993 | 378 |
| 62 | 3300005366 | Ga0070659_100115233 | Ga0070659_1001152331 | 378 |
| 63 | 3300005438 | Ga0070701_10041883 | Ga0070701_100418832 | 378 |
| 64 | 3300005457 | Ga0070662_100089025 | Ga0070662_1000890252 | 378 |
| 65 | 3300005544 | Ga0070686_100013033 | Ga0070686_1000130334 | 378 |
| 66 | 3300005985 | Ga0081539_10000407 | Ga0081539_1000040775 | 378 |
| 67 | 3300009174 | Ga0105241_10234354 | Ga0105241_102343541 | 378 |
| 68 | 3300009177 | Ga0105248_10053667 | Ga0105248_100536675 | 378 |
| 69 | 3300010375 | Ga0105239_10416876 | Ga0105239_104168761 | 378 |
| 70 | 3300013297 | Ga0157378_10011080 | Ga0157378_100110802 | 378 |
| 71 | 3300014968 | Ga0157379_10095980 | Ga0157379_100959802 | 378 |
| 72 | 3300025925 | Ga0207650_10096546 | Ga0207650_100965462 | 378 |
| 73 | 3300025941 | Ga0207711_10008231 | Ga0207711_100082317 | 378 |
| 74 | 3300035207 | Ga0373942_0007321 | Ga0373942_0007321_439_1596 | 378 |
| 75 | 3300048911 | Ga0496108_0016157 | Ga0496108_0016157_703_1860 | 378 |
| 76 | 3300048915 | Ga0496112_0176566 | Ga0496112_0176566_827_1963 | 378 |
| 77 | 3300005328 | Ga0070676_10073296 | Ga0070676_100732962 | 379 |
| 78 | 3300005336 | Ga0070680_100043011 | Ga0070680_1000430114 | 379 |
| 79 | 3300005441 | Ga0070700_100046725 | Ga0070700_1000467253 | 379 |
| 80 | 3300005545 | Ga0070695_100022598 | Ga0070695_1000225982 | 379 |
| 81 | 3300005617 | Ga0068859_100009641 | Ga0068859_1000096417 | 379 |
| 82 | 3300006846 | Ga0075430_100027962 | Ga0075430_1000279622 | 379 |
| 83 | 3300006931 | Ga0097620_100009642 | Ga0097620_1000096425 | 379 |
| 84 | 3300007076 | Ga0075435_100010210 | Ga0075435_1000102106 | 379 |
| 85 | 3300009094 | Ga0111539_10064050 | Ga0111539_100640504 | 379 |
| 86 | 3300009147 | Ga0114129_10187757 | Ga0114129_101877571 | 379 |
| 87 | 3300013308 | Ga0157375_10057123 | Ga0157375_100571233 | 379 |
| 88 | 3300021384 | Ga0213876_10000219 | Ga0213876_1000021910 | 379 |
| 89 | 3300025917 | Ga0207660_10028351 | Ga0207660_100283512 | 379 |
| 90 | 3300026089 | Ga0207648_10166066 | Ga0207648_101660662 | 379 |
| 91 | 3300039437 | Ga0436365_0227208 | Ga0436365_0227208_4778_5938 | 379 |
| 92 | 3300050509 | nmdc:mga0qj67_21226_c1 | nmdc:mga0qj67_21226_c1_1859_3019 | 379 |
| 93 | 3300050511 | nmdc:mga08y16_51381_c1 | nmdc:mga08y16_51381_c1_720_1883 | 379 |
| 94 | 3300050513 | nmdc:mga0rr50_22507_c1 | nmdc:mga0rr50_22507_c1_1845_3023 | 379 |
| 95 | 2162886006 | SwRhRL3b_contig_2779684 | SwRhRL3b_0297.00000660 | 380 |
| 96 | 2162886011 | MRS1b_contig_224522 | MRS1b_0555.00000930 | 380 |
| 97 | 3300000532 | CNAas_1000608 | CNAas_10006084 | 380 |
| 98 | 3300005288 | Ga0065714_10065325 | Ga0065714_100653251 | 380 |
| 99 | 3300005289 | Ga0065704_10071785 | Ga0065704_100717858 | 380 |
| 100 | 3300005290 | Ga0065712_10006704 | Ga0065712_100067043 | 380 |
| 101 | 3300005290 | Ga0065712_10011717 | Ga0065712_100117172 | 380 |
| 102 | 3300005290 | Ga0065712_10068401 | Ga0065712_100684011 | 380 |
| 103 | 3300005293 | Ga0065715_10094670 | Ga0065715_100946703 | 380 |
| 104 | 3300005295 | Ga0065707_10000960 | Ga0065707_1000096011 | 380 |
| 105 | 3300005334 | Ga0068869_100020085 | Ga0068869_1000200852 | 380 |
| 106 | 3300005334 | Ga0068869_100085391 | Ga0068869_1000853911 | 380 |
| 107 | 3300005336 | Ga0070680_100002363 | Ga0070680_1000023635 | 380 |
| 108 | 3300005338 | Ga0068868_100020437 | Ga0068868_1000204374 | 380 |
| 109 | 3300005343 | Ga0070687_100114718 | Ga0070687_1001147181 | 380 |
| 110 | 3300005355 | Ga0070671_100001483 | Ga0070671_1000014837 | 380 |
| 111 | 3300005365 | Ga0070688_100009429 | Ga0070688_1000094294 | 380 |
| 112 | 3300005367 | Ga0070667_100112584 | Ga0070667_1001125843 | 380 |
| 113 | 3300005438 | Ga0070701_10062444 | Ga0070701_100624442 | 380 |
| 114 | 3300005444 | Ga0070694_100087103 | Ga0070694_1000871032 | 380 |
| 115 | 3300005456 | Ga0070678_100061197 | Ga0070678_1000611972 | 380 |
| 116 | 3300005458 | Ga0070681_10001239 | Ga0070681_1000123911 | 380 |
| 117 | 3300005459 | Ga0068867_100016294 | Ga0068867_1000162942 | 380 |
| 118 | 3300005471 | Ga0070698_100089101 | Ga0070698_1000891011 | 380 |
| 119 | 3300005518 | Ga0070699_100156727 | Ga0070699_1001567272 | 380 |
| 120 | 3300005530 | Ga0070679_100005621 | Ga0070679_1000056217 | 380 |
| 121 | 3300005539 | Ga0068853_100215158 | Ga0068853_1002151582 | 380 |
| 122 | 3300005543 | Ga0070672_100043849 | Ga0070672_1000438492 | 380 |
| 123 | 3300005615 | Ga0070702_100058982 | Ga0070702_1000589822 | 380 |
| 124 | 3300005618 | Ga0068864_100029322 | Ga0068864_1000293222 | 380 |
| 125 | 3300005618 | Ga0068864_100291328 | Ga0068864_1002913282 | 380 |
| 126 | 3300005718 | Ga0068866_10004266 | Ga0068866_100042664 | 380 |
| 127 | 3300005840 | Ga0068870_10010022 | Ga0068870_100100223 | 380 |
| 128 | 3300005842 | Ga0068858_100037567 | Ga0068858_1000375673 | 380 |
| 129 | 3300005843 | Ga0068860_100043342 | Ga0068860_1000433424 | 380 |
| 130 | 3300005844 | Ga0068862_100040243 | Ga0068862_1000402432 | 380 |
| 131 | 3300006358 | Ga0068871_100059428 | Ga0068871_1000594282 | 380 |
| 132 | 3300006852 | Ga0075433_10001603 | Ga0075433_100016035 | 380 |
| 133 | 3300006880 | Ga0075429_100041653 | Ga0075429_1000416533 | 380 |
| 134 | 3300006881 | Ga0068865_100005469 | Ga0068865_1000054697 | 380 |
| 135 | 3300009011 | Ga0105251_10041202 | Ga0105251_100412022 | 380 |
| 136 | 3300009094 | Ga0111539_10001336 | Ga0111539_1000133638 | 380 |
| 137 | 3300009094 | Ga0111539_10024242 | Ga0111539_100242424 | 380 |
| 138 | 3300009147 | Ga0114129_10398770 | Ga0114129_103987702 | 380 |
| 139 | 3300009148 | Ga0105243_10012403 | Ga0105243_100124033 | 380 |
| 140 | 3300009174 | Ga0105241_10031115 | Ga0105241_100311152 | 380 |
| 141 | 3300009176 | Ga0105242_10007895 | Ga0105242_100078956 | 380 |
| 142 | 3300009177 | Ga0105248_10012712 | Ga0105248_1001271210 | 380 |
| 143 | 3300010375 | Ga0105239_10057254 | Ga0105239_100572544 | 380 |
| 144 | 3300010375 | Ga0105239_10104926 | Ga0105239_101049262 | 380 |
| 145 | 3300011119 | Ga0105246_10297351 | Ga0105246_102973511 | 380 |
| 146 | 3300013297 | Ga0157378_10002886 | Ga0157378_1000288618 | 380 |
| 147 | 3300013297 | Ga0157378_10235802 | Ga0157378_102358021 | 380 |
| 148 | 3300013307 | Ga0157372_10030042 | Ga0157372_100300421 | 380 |
| 149 | 3300014325 | Ga0163163_10019545 | Ga0163163_100195453 | 380 |
| 150 | 3300014325 | Ga0163163_10091498 | Ga0163163_100914982 | 380 |
| 151 | 3300014326 | Ga0157380_10003824 | Ga0157380_100038246 | 380 |
| 152 | 3300014745 | Ga0157377_10011704 | Ga0157377_100117042 | 380 |
| 153 | 3300014969 | Ga0157376_10105654 | Ga0157376_101056542 | 380 |
| 154 | 3300017792 | Ga0163161_10013456 | Ga0163161_100134562 | 380 |
| 155 | 3300025899 | Ga0207642_10029868 | Ga0207642_100298682 | 380 |
| 156 | 3300025908 | Ga0207643_10019117 | Ga0207643_100191172 | 380 |
| 157 | 3300025912 | Ga0207707_10000022 | Ga0207707_10000022163 | 380 |
| 158 | 3300025917 | Ga0207660_10000065 | Ga0207660_100000655 | 380 |
| 159 | 3300025918 | Ga0207662_10007071 | Ga0207662_100070714 | 380 |
| 160 | 3300025921 | Ga0207652_10002734 | Ga0207652_1000273414 | 380 |
| 161 | 3300025923 | Ga0207681_10049479 | Ga0207681_100494793 | 380 |
| 162 | 3300025931 | Ga0207644_10004759 | Ga0207644_100047593 | 380 |
| 163 | 3300025935 | Ga0207709_10075716 | Ga0207709_100757162 | 380 |
| 164 | 3300025938 | Ga0207704_10057570 | Ga0207704_100575702 | 380 |
| 165 | 3300025940 | Ga0207691_10002711 | Ga0207691_100027119 | 380 |
| 166 | 3300025941 | Ga0207711_10029559 | Ga0207711_100295595 | 380 |
| 167 | 3300025942 | Ga0207689_10003053 | Ga0207689_100030536 | 380 |
| 168 | 3300025942 | Ga0207689_10016170 | Ga0207689_100161701 | 380 |
| 169 | 3300025960 | Ga0207651_10036408 | Ga0207651_100364081 | 380 |
| 170 | 3300026088 | Ga0207641_10024394 | Ga0207641_100243942 | 380 |
| 171 | 3300026089 | Ga0207648_10003569 | Ga0207648_100035693 | 380 |
| 172 | 3300026095 | Ga0207676_10003190 | Ga0207676_100031904 | 380 |
| 173 | 3300027907 | Ga0207428_10065373 | Ga0207428_100653732 | 380 |
| 174 | 3300027907 | Ga0207428_10176832 | Ga0207428_101768321 | 380 |
| 175 | 3300028381 | Ga0268264_10206289 | Ga0268264_102062891 | 380 |
| 176 | 3300038996 | Ga0242420_001602 | Ga0242420_001602_1053_2216 | 380 |
| 177 | 3300045051 | Ga0451576_0517389 | Ga0451576_0517389_65_1228 | 380 |
| 178 | 3300050508 | nmdc:mga09592_260646_c1 | nmdc:mga09592_260646_c1_96_1259 | 380 |
| 179 | 3300050511 | nmdc:mga08y16_1383_c1 | nmdc:mga08y16_1383_c1_1232_2374 | 380 |
| 180 | 3300050511 | nmdc:mga08y16_5057_c1 | nmdc:mga08y16_5057_c1_1951_3123 | 380 |
| 181 | 3300050512 | nmdc:mga0n895_298585_c1 | nmdc:mga0n895_298585_c1_198_1361 | 380 |
| 182 | 3300050515 | nmdc:mga0a205_202687_c1 | nmdc:mga0a205_202687_c1_379_1521 | 380 |
| 183 | 3300050515 | nmdc:mga0a205_33103_c1 | nmdc:mga0a205_33103_c1_3750_4913 | 380 |
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 2dy3-assembly1.cif.gz_A | crystal structure of alanine racemase from corynebacterium glutamicum | 0.9382 | 14 | 380 |
| 4lut-assembly1.cif.gz_B | alanine racemase [clostridium difficile 630] complex with cycloserine | 0.9367 | 9 | 380 |
| 4lus-assembly2.cif.gz_C | alanine racemase [clostridium difficile 630] | 0.9362 | 12 | 380 |
| 4luy-assembly1.cif.gz_B | crystal structure of cdalr mutant k 271 t | 0.936 | 9 | 380 |
| 2dy3-assembly2.cif.gz_C | crystal structure of alanine racemase from corynebacterium glutamicum | 0.9358 | 16 | 380 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| af_Q9P5N3_224_370_2.40.37.10 | Mainly Beta;Beta Barrel;Lyase, Ornithine Decarboxylase; Chain A, domain 1;Lyase, Ornithine Decarboxylase; Chain A, domain 1 | 0.954 | 253 | 380 | 2.40.37.10 |
| 5yycC01 | Mainly Beta;Beta Barrel;Lyase, Ornithine Decarboxylase; Chain A, domain 1;Lyase, Ornithine Decarboxylase; Chain A, domain 1 | 0.9531 | 257 | 377 | 2.40.37.10 |
| 4y2wB01 | Mainly Beta;Beta Barrel;Lyase, Ornithine Decarboxylase; Chain A, domain 1;Lyase, Ornithine Decarboxylase; Chain A, domain 1 | 0.9497 | 257 | 380 | 2.40.37.10 |
| 4dzaA01 | Mainly Beta;Beta Barrel;Lyase, Ornithine Decarboxylase; Chain A, domain 1;Lyase, Ornithine Decarboxylase; Chain A, domain 1 | 0.9438 | 255 | 380 | 2.40.37.10 |
| 4lusB02 | Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Alanine racemase | 0.9433 | 23 | 233 | 3.20.20.10 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A2V8M156-F1-model_v4 | Alanine racemase | 0.9816 | 119 | 380 |
GO:0005829
GO:0006522 GO:0008784 GO:0030170 |
| AF-A0A7Y2GIF3-F1-model_v4 | Alanine racemase (EC 5.1.1.1) | 0.9756 | 207 | 380 |
GO:0005829
GO:0008784 GO:0030170 GO:0030632 |
| AF-A0A7V2NQC1-F1-model_v4 | Alanine racemase | 0.9749 | 20 | 148 |
GO:0005829
GO:0008784 GO:0030170 GO:0030632 |
| AF-A0A831TG46-F1-model_v4 | Alanine racemase | 0.9747 | 254 | 380 |
GO:0005829
GO:0008784 GO:0009252 GO:0030170 GO:0030632 |
| AF-A0A7V9SZC4-F1-model_v4 | Alanine racemase (EC 5.1.1.1) | 0.9731 | 187 | 380 |
GO:0005829
GO:0008784 GO:0030170 GO:0030632 |
Predicted Structure (AlphaFold2)
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