F280352

General Info

Members Datasets Scaffolds Average Seq Length
183 127 366 188

Family's Representative Sequence

Representative Sequence 3300005353|Ga0070669_100460862|Ga0070669_1004608622
Length 201
Sequence MVLTPSSMLPLGTQLPSFSLPDFNGLSRAQSRGRTVSTDDFREAPALLVAFICGHCPFVTHIRKGFADFAREYQARGLAIVAVNSNDVETFPDDGPDGMREEAARAGYVFPYLFDETQEVAKRFHAACTPDLYLFDQERSLVYRGRFDDSRPRTNPPMPVTGKDIRAAADAVLSGRPVPIDQKGSVGCNIKWKWGNEPDYF

Samples

Sample ID Description Type Environment
1 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
2 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
3 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
4 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
5 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
6 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
7 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
8 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
9 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
10 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
11 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
12 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
13 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
14 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
15 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
16 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
17 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
18 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
19 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
20 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
21 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
22 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
23 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
24 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
25 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
26 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
27 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
28 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
29 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
30 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
31 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
32 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
33 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
34 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
35 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
36 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
37 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
38 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
39 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
60 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
63 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
64 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
65 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
66 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
67 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
68 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
69 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
70 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
71 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
72 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
73 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
74 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
75 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
76 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
77 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
78 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
79 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
80 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
81 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
82 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
83 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
84 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
85 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
86 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
87 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
88 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
89 3300033541 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
90 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
91 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
92 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
93 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
94 3300041443 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_2 MetaG Metagenome Rhizoplane
95 3300041451 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_3 MetaG Metagenome Rhizoplane
96 3300041453 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_6 MetaG Metagenome Rhizoplane
97 3300041463 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_7 MetaG Metagenome Rhizoplane
98 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
99 3300041491 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_1 MetaG Metagenome Unclassified
100 3300041505 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_9 MetaG Metagenome Unclassified
101 3300041507 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_10 MetaG Metagenome Unclassified
102 3300041509 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_6 MetaG Metagenome Unclassified
103 3300041511 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_12 MetaG Metagenome Unclassified
104 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
105 3300042004 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 Metagenome Rhizosphere
106 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
107 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
108 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
109 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
110 3300049526 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D25_B_7_control Metagenome Rhizosphere
111 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
112 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
113 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
114 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
115 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
116 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
117 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
118 3300049663 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought Metagenome Rhizosphere
119 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
120 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
121 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
122 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
123 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
124 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
125 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
126 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
127 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.45
Metatranscriptomes 0.55
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.19
Nodule 0
Rhizoplane 3.83
Rhizosphere 85.25
Stem 0
Stem Tuber 0
Unclassified 4.37

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070669_100460862 3300005353 Bacteria 1049
2 rootH2_10016833 3300003320 Bacteria 18286
3 rootH2_10083332 3300003320 Bacteria 5389
4 rootH1_10033085 3300003323 Bacteria 4845
5 rootH1_10079258 3300003323 Bacteria 2721
6 rootH1_10199710 3300003323 Bacteria 8215
7 rootH1_10222348 3300003323 Unclassified 4585
8 Ga0065712_10006830 3300005290 Bacteria 4540
9 Ga0070670_100065888 3300005331 Bacteria 3108
10 Ga0068869_100467217 3300005334 Bacteria 1048
11 Ga0070689_100000007 3300005340 Bacteria 312944
12 Ga0070689_100048974 3300005340 Bacteria 3261
13 Ga0070689_100364788 3300005340 Bacteria 1214
14 Ga0070687_100227169 3300005343 Bacteria 1147
15 Ga0070669_100202399 3300005353 Bacteria 1563
16 Ga0070675_100082136 3300005354 Unclassified 2688
17 Ga0070673_100060907 3300005364 Bacteria 2992
18 Ga0070688_100016874 3300005365 Bacteria 4181
19 Ga0070701_10033694 3300005438 Bacteria 2561
20 Ga0070700_100633641 3300005441 Bacteria 842
21 Ga0070694_100243174 3300005444 Unclassified 1358
22 Ga0070662_100126744 3300005457 Bacteria 1963
23 Ga0068867_100671932 3300005459 Bacteria 911
24 Ga0068853_100003795 3300005539 Bacteria 11580
25 Ga0070665_101259111 3300005548 Bacteria 750
26 Ga0068855_100002957 3300005563 Bacteria 20767
27 Ga0068855_100084575 3300005563 Bacteria 3672
28 Ga0068855_100134295 3300005563 Bacteria 2823
29 Ga0070664_100038282 3300005564 Unclassified 4036
30 Ga0068857_100709371 3300005577 Bacteria 956
31 Ga0068859_100034661 3300005617 Bacteria 5066
32 Ga0068859_100109898 3300005617 Bacteria 2818
33 Ga0068859_100129171 3300005617 Bacteria 2598
34 Ga0068864_100027467 3300005618 Bacteria 4807
35 Ga0068861_100161212 3300005719 Bacteria 1850
36 Ga0068863_100460740 3300005841 Bacteria 1248
37 Ga0068860_100168868 3300005843 Bacteria 2112
38 Ga0075366_10009458 3300006195 Bacteria 5440
39 Ga0075366_10037927 3300006195 Bacteria 2846
40 Ga0075429_100101107 3300006880 Bacteria 2517
41 Ga0068865_101017874 3300006881 Bacteria 726
42 Ga0097620_100034661 3300006931 Bacteria 5066
43 Ga0097620_100109901 3300006931 Bacteria 2818
44 Ga0097620_100129173 3300006931 Bacteria 2598
45 Ga0111539_10002400 3300009094 Bacteria 24912
46 Ga0111539_10003141 3300009094 Bacteria 21849
47 Ga0111539_10050284 3300009094 Unclassified 4965
48 Ga0114129_10177939 3300009147 Bacteria 2896
49 Ga0114129_10877039 3300009147 Bacteria 1139
50 Ga0105237_10054681 3300009545 Bacteria 4000
51 Ga0105238_10762392 3300009551 Bacteria 982
52 Ga0157375_10170330 3300013308 Bacteria 2325
53 Ga0163163_10716917 3300014325 Bacteria 1064
54 Ga0157377_10193304 3300014745 Unclassified 1287
55 Ga0157379_10716653 3300014968 Bacteria 940
56 Ga0207671_10037462 3300025914 Bacteria 3596
57 Ga0207681_10084723 3300025923 Bacteria 2248
58 Ga0207681_10592943 3300025923 Bacteria 915
59 Ga0207694_10220412 3300025924 Bacteria 1547
60 Ga0207650_10006060 3300025925 Bacteria 8248
61 Ga0207659_10417581 3300025926 Bacteria 1125
62 Ga0207706_10153428 3300025933 Bacteria 2026
63 Ga0207670_10000025 3300025936 Bacteria 141352
64 Ga0207670_10046438 3300025936 Bacteria 2886
65 Ga0207669_10758086 3300025937 Bacteria 802
66 Ga0207691_10199100 3300025940 Bacteria 1744
67 Ga0207689_10658725 3300025942 Bacteria 882
68 Ga0207679_10014446 3300025945 Bacteria 5194
69 Ga0207667_10003685 3300025949 Bacteria 18895
70 Ga0207667_10008139 3300025949 Bacteria 12488
71 Ga0207667_10189176 3300025949 Bacteria 2112
72 Ga0207667_10528570 3300025949 Bacteria 1194
73 Ga0207651_10095195 3300025960 Bacteria 2192
74 Ga0207668_10486907 3300025972 Bacteria 1059
75 Ga0207639_10046585 3300026041 Bacteria 3272
76 Ga0207708_10298577 3300026075 Bacteria 1309
77 Ga0207648_10541715 3300026089 Bacteria 1068
78 Ga0207676_10668833 3300026095 Bacteria 1003
79 Ga0207676_10693390 3300026095 Bacteria 986
80 Ga0207675_100233140 3300026118 Bacteria 1776
81 Ga0207675_100732922 3300026118 Bacteria 999
82 Ga0207698_10072001 3300026142 Bacteria 2745
83 Ga0207428_10083348 3300027907 Bacteria 2494
84 Ga0207428_10240653 3300027907 Bacteria 1352
85 Ga0268266_10525191 3300028379 Bacteria 1132
86 Ga0268264_10139167 3300028381 Bacteria 2162
87 Ga0265337_1003803 3300028556 Bacteria 6428
88 Ga0265326_10055835 3300028558 Bacteria 1117
89 Ga0265319_1001138 3300028563 Bacteria 16520
90 Ga0265319_1026139 3300028563 Bacteria 2083
91 Ga0265323_10037281 3300028653 Bacteria 1782
92 Ga0265322_10002261 3300028654 Bacteria 5962
93 Ga0265322_10013834 3300028654 Bacteria 2335
94 Ga0265338_10241833 3300028800 Bacteria 1336
95 Ga0265330_10004225 3300031235 Bacteria 7325
96 Ga0265330_10022393 3300031235 Bacteria 2875
97 Ga0265320_10000130 3300031240 Bacteria 65406
98 Ga0265320_10009790 3300031240 Bacteria 5749
99 Ga0265320_10036630 3300031240 Bacteria 2477
100 Ga0265320_10037197 3300031240 Bacteria 2453
101 Ga0265325_10006637 3300031241 Bacteria 6999
102 Ga0265329_10000062 3300031242 Bacteria 47661
103 Ga0265329_10017044 3300031242 Bacteria 2507
104 Ga0265339_10063410 3300031249 Bacteria 1984
105 Ga0265331_10006224 3300031250 Bacteria 7081
106 Ga0265316_10000235 3300031344 Bacteria 63962
107 Ga0265316_10020271 3300031344 Bacteria 5664
108 Ga0307408_100019276 3300031548 Bacteria 4592
109 Ga0265313_10003053 3300031595 Bacteria 13896
110 Ga0307508_10002704 3300031616 Bacteria 18558
111 Ga0307508_10145758 3300031616 Bacteria 1972
112 Ga0265314_10000015 3300031711 Bacteria 397180
113 Ga0265314_10030096 3300031711 Bacteria 4023
114 Ga0265314_10037418 3300031711 Bacteria 3516
115 Ga0265342_10000486 3300031712 Bacteria 43046
116 Ga0265342_10000724 3300031712 Bacteria 34052
117 Ga0316576_10155974 3300031727 Bacteria 1721
118 Ga0316576_10204219 3300031727 Bacteria 1488
119 Ga0316576_10280103 3300031727 Bacteria 1249
120 Ga0307516_10009735 3300031730 Bacteria 10664
121 Ga0307405_10186628 3300031731 Bacteria 1493
122 Ga0307406_10031523 3300031901 Bacteria 3229
123 Ga0307407_10420757 3300031903 Unclassified 963
124 Ga0307407_10586696 3300031903 Bacteria 828
125 Ga0307409_100161713 3300031995 Bacteria 1959
126 Ga0307409_100975727 3300031995 Bacteria 864
127 Ga0307416_100093574 3300032002 Bacteria 2589
128 Ga0307416_100156890 3300032002 Bacteria 2097
129 Ga0307414_10132927 3300032004 Bacteria 1934
130 Ga0307414_10639336 3300032004 Bacteria 958
131 Ga0307411_10022596 3300032005 Bacteria 3706
132 Ga0307411_10141802 3300032005 Bacteria 1773
133 Ga0316596_1024256 3300033541 Bacteria 1557
134 Ga0373927_0391253 3300035695 Bacteria 917
135 Ga0316582_0054256 3300036647 Bacteria 2551
136 Ga0316584_0210014 3300036712 Bacteria 1433
137 Ga0395901_1377769 3300038443 Bacteria 664
138 Ga0451789_1031768 3300041443 Bacteria 1734
139 Ga0451791_0335750 3300041451 Bacteria 1104
140 Ga0451797_0792380 3300041453 Bacteria 3090
141 Ga0451804_0936274 3300041463 Bacteria 819
142 Ga0451807_0210375 3300041486 Bacteria 3022
143 Ga0451807_1512065 3300041486 Bacteria 813
144 Ga0451807_1526694 3300041486 Bacteria 786
145 Ga0451833_0037036 3300041491 Bacteria 678
146 Ga0451849_1332365 3300041505 Bacteria 717
147 Ga0451851_0922886 3300041507 Bacteria 738
148 Ga0451843_0300466 3300041509 Bacteria 1081
149 Ga0451855_1122578 3300041511 Bacteria 1985
150 Ga0451855_1181481 3300041511 Bacteria 684
151 Ga0451853_0608723 3300041512 Bacteria 27406
152 Ga0439445_0024188 3300042004 Bacteria 1542
153 Ga0451576_0097706 3300045051 Bacteria 3054
154 Ga0451576_0739856 3300045051 Bacteria 1033
155 Ga0495643_0018655 3300046522 Bacteria 4026
156 Ga0495621_0161449 3300046539 Bacteria 886
157 Ga0495633_0134712 3300046558 Bacteria 1142
158 Ga0501303_008692 3300049526 Unclassified 926
159 Ga0501037_0712955 3300049573 Bacteria 667
160 Ga0501039_0758985 3300049575 Bacteria 757
161 Ga0501067_0195654 3300049583 Bacteria 1126
162 Ga0501068_0005937 3300049584 Bacteria 6705
163 Ga0501068_0284364 3300049584 Bacteria 1057
164 Ga0501071_0007634 3300049587 Bacteria 7127
165 Ga0501073_0035064 3300049589 Bacteria 3567
166 Ga0501077_0554197 3300049593 Bacteria 738
167 Ga0501223_048606 3300049663 Bacteria 823
168 Ga0501080_0414081 3300049742 Bacteria 1211
169 Ga0501080_0416952 3300049742 Bacteria 1207
170 Ga0501035_0366411 3300049822 Bacteria 1203
171 Ga0501035_0382031 3300049822 Bacteria 1174
172 nmdc:mga0k408_309243_c1 3300050493 Bacteria 943
173 nmdc:mga0k408_63507_c1 3300050493 Bacteria 2148
174 nmdc:mga05p37_240801_c1 3300050507 Bacteria 2175
175 nmdc:mga05p37_595835_c1 3300050507 Bacteria 1248
176 nmdc:mga09592_100535_c1 3300050508 Bacteria 2476
177 nmdc:mga09592_288362_c1 3300050508 Bacteria 1423
178 nmdc:mga08y16_1144187_c1 3300050511 Bacteria 751
179 nmdc:mga08y16_1820_c1 3300050511 Bacteria 21625
180 nmdc:mga08y16_3793_c1 3300050511 Bacteria 15739
181 Ga0501084_0059111 3300054114 Bacteria 3208
182 Ga0466962_0028767 3300061719 Bacteria 2662
183 Ga0530510_0984877 3300061734 Bacteria 645
184 Ga0070669_100460862
185 rootH2_10016833
186 rootH2_10083332
187 rootH1_10033085
188 rootH1_10079258
189 rootH1_10199710
190 rootH1_10222348
191 Ga0065712_10006830
192 Ga0070670_100065888
193 Ga0068869_100467217
194 Ga0070689_100000007
195 Ga0070689_100048974
196 Ga0070689_100364788
197 Ga0070687_100227169
198 Ga0070669_100202399
199 Ga0070675_100082136
200 Ga0070673_100060907
201 Ga0070688_100016874
202 Ga0070701_10033694
203 Ga0070700_100633641
204 Ga0070694_100243174
205 Ga0070662_100126744
206 Ga0068867_100671932
207 Ga0068853_100003795
208 Ga0070665_101259111
209 Ga0068855_100002957
210 Ga0068855_100084575
211 Ga0068855_100134295
212 Ga0070664_100038282
213 Ga0068857_100709371
214 Ga0068859_100034661
215 Ga0068859_100109898
216 Ga0068859_100129171
217 Ga0068864_100027467
218 Ga0068861_100161212
219 Ga0068863_100460740
220 Ga0068860_100168868
221 Ga0075366_10009458
222 Ga0075366_10037927
223 Ga0075429_100101107
224 Ga0068865_101017874
225 Ga0097620_100034661
226 Ga0097620_100109901
227 Ga0097620_100129173
228 Ga0111539_10002400
229 Ga0111539_10003141
230 Ga0111539_10050284
231 Ga0114129_10177939
232 Ga0114129_10877039
233 Ga0105237_10054681
234 Ga0105238_10762392
235 Ga0157375_10170330
236 Ga0163163_10716917
237 Ga0157377_10193304
238 Ga0157379_10716653
239 Ga0207671_10037462
240 Ga0207681_10084723
241 Ga0207681_10592943
242 Ga0207694_10220412
243 Ga0207650_10006060
244 Ga0207659_10417581
245 Ga0207706_10153428
246 Ga0207670_10000025
247 Ga0207670_10046438
248 Ga0207669_10758086
249 Ga0207691_10199100
250 Ga0207689_10658725
251 Ga0207679_10014446
252 Ga0207667_10003685
253 Ga0207667_10008139
254 Ga0207667_10189176
255 Ga0207667_10528570
256 Ga0207651_10095195
257 Ga0207668_10486907
258 Ga0207639_10046585
259 Ga0207708_10298577
260 Ga0207648_10541715
261 Ga0207676_10668833
262 Ga0207676_10693390
263 Ga0207675_100233140
264 Ga0207675_100732922
265 Ga0207698_10072001
266 Ga0207428_10083348
267 Ga0207428_10240653
268 Ga0268266_10525191
269 Ga0268264_10139167
270 Ga0265337_1003803
271 Ga0265326_10055835
272 Ga0265319_1001138
273 Ga0265319_1026139
274 Ga0265323_10037281
275 Ga0265322_10002261
276 Ga0265322_10013834
277 Ga0265338_10241833
278 Ga0265330_10004225
279 Ga0265330_10022393
280 Ga0265320_10000130
281 Ga0265320_10009790
282 Ga0265320_10036630
283 Ga0265320_10037197
284 Ga0265325_10006637
285 Ga0265329_10000062
286 Ga0265329_10017044
287 Ga0265339_10063410
288 Ga0265331_10006224
289 Ga0265316_10000235
290 Ga0265316_10020271
291 Ga0307408_100019276
292 Ga0265313_10003053
293 Ga0307508_10002704
294 Ga0307508_10145758
295 Ga0265314_10000015
296 Ga0265314_10030096
297 Ga0265314_10037418
298 Ga0265342_10000486
299 Ga0265342_10000724
300 Ga0316576_10155974
301 Ga0316576_10204219
302 Ga0316576_10280103
303 Ga0307516_10009735
304 Ga0307405_10186628
305 Ga0307406_10031523
306 Ga0307407_10420757
307 Ga0307407_10586696
308 Ga0307409_100161713
309 Ga0307409_100975727
310 Ga0307416_100093574
311 Ga0307416_100156890
312 Ga0307414_10132927
313 Ga0307414_10639336
314 Ga0307411_10022596
315 Ga0307411_10141802
316 Ga0316596_1024256
317 Ga0373927_0391253
318 Ga0316582_0054256
319 Ga0316584_0210014
320 Ga0395901_1377769
321 Ga0451789_1031768
322 Ga0451791_0335750
323 Ga0451797_0792380
324 Ga0451804_0936274
325 Ga0451807_0210375
326 Ga0451807_1512065
327 Ga0451807_1526694
328 Ga0451833_0037036
329 Ga0451849_1332365
330 Ga0451851_0922886
331 Ga0451843_0300466
332 Ga0451855_1122578
333 Ga0451855_1181481
334 Ga0451853_0608723
335 Ga0439445_0024188
336 Ga0451576_0097706
337 Ga0451576_0739856
338 Ga0495643_0018655
339 Ga0495621_0161449
340 Ga0495633_0134712
341 Ga0501303_008692
342 Ga0501037_0712955
343 Ga0501039_0758985
344 Ga0501067_0195654
345 Ga0501068_0005937
346 Ga0501068_0284364
347 Ga0501071_0007634
348 Ga0501073_0035064
349 Ga0501077_0554197
350 Ga0501223_048606
351 Ga0501080_0414081
352 Ga0501080_0416952
353 Ga0501035_0366411
354 Ga0501035_0382031
355 nmdc:mga0k408_309243_c1
356 nmdc:mga0k408_63507_c1
357 nmdc:mga05p37_240801_c1
358 nmdc:mga05p37_595835_c1
359 nmdc:mga09592_100535_c1
360 nmdc:mga09592_288362_c1
361 nmdc:mga08y16_1144187_c1
362 nmdc:mga08y16_1820_c1
363 nmdc:mga08y16_3793_c1
364 Ga0501084_0059111
365 Ga0466962_0028767
366 Ga0530510_0984877

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF08534

Redoxin

Redoxin

10

158

0.92

PF00578

AhpC-TSA

AhpC/TSA family

11

144

0.91

Structural Annotation

Top 5 Hits

ID Description Score Start End
2ywi-assembly2.cif.gz_B crystal structure of uncharacterized conserved protein from geobacillus kaustophilus 0.9807 1 179
3u5r-assembly1.cif.gz_E crystal structure of a hypothetical protein smc02350 from sinorhizobium meliloti 1021 0.9736 1 178
2ywi-assembly2.cif.gz_B crystal structure of uncharacterized conserved protein from geobacillus kaustophilus 0.9596 1 179
3u5r-assembly1.cif.gz_E crystal structure of a hypothetical protein smc02350 from sinorhizobium meliloti 1021 0.9473 1 178
1lu4-assembly1.cif.gz_A 1.1 angstrom resolution crystal structure of a secreted mycobacterium tuberculosis disulfide oxidoreductase homologous to e. coli dsbe: implications for functions 0.9304 11 126
ID Description Score Start End Superfamily
af_P71990_1_182_3.40.30.10 Alpha Beta;3-Layer(aba) Sandwich;Glutaredoxin;Glutaredoxin 0.99 1 176 3.40.30.10
af_I1KAL3_50_244_3.40.30.10 Alpha Beta;3-Layer(aba) Sandwich;Glutaredoxin;Glutaredoxin 0.9674 1 179 3.40.30.10
af_I1KAL3_50_244_3.40.30.10 Alpha Beta;3-Layer(aba) Sandwich;Glutaredoxin;Glutaredoxin 0.9467 1 179 3.40.30.10
1st9A00 Alpha Beta;3-Layer(aba) Sandwich;Glutaredoxin;Glutaredoxin 0.9271 5 129 3.40.30.10
2ywoA00 Alpha Beta;3-Layer(aba) Sandwich;Glutaredoxin;Glutaredoxin 0.9251 2 178 3.40.30.10
ID Description Score Start End GO Terms
AF-A0A1Z4EJ21-F1-model_v4 Thioredoxin family protein 0.9981 65 176 GO:0016209
GO:0016491
AF-A0A2T2UMF4-F1-model_v4 Thioredoxin family protein 0.9914 30 178 GO:0016209
GO:0016491
AF-A0A3S1YF74-F1-model_v4 Thioredoxin family protein 0.991 34 178 GO:0016491
AF-A0A846FSI1-F1-model_v4 deleted 0.9903 30 178
AF-A0A1G6ZN64-F1-model_v4 AhpC/TSA family protein 0.9898 36 176 GO:0016209
GO:0016491

Map