F278035

General Info

Members Datasets Scaffolds Average Seq Length
181 103 181 288

Family's Representative Sequence

Representative Sequence 3300048909|Ga0496106_0187203|Ga0496106_0187203_407_1390
Length 327
Sequence MMNMDGMDKADRRSGDSGRRTHDRHSSRAVTPSFGTPVPVDDRLRFPLSERQLEIVVRDALQEDGAFNDITTIATVVSHRRAHGTIVARAAGVIAGVPLAVAAFRVLDPNVAIRVDVDCGGRAEYGTSVMRISGMARAILSAERVALNFLQRLSGIATLTARYVQAVAGTQAKILDTRKTTPGWRALEKYAVRAGGGTNHRLDLADQVLIKDNHIAAVDGDIGLAVKRARDFAPPGARIEVECESAAQVNAAVSARADVILLDNMRVPELVEALREIRGRALSEASGGISLDNVRAIASTGVDRISVGALTHSAPALDIALDFEALG

Samples

Sample ID Description Type Environment
1 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
2 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
3 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
4 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
5 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
6 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
7 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
8 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
9 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
10 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
11 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
12 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
13 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
14 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
15 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
16 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
17 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
18 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
19 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
20 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
21 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
22 3300021358 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 Metagenome Rhizosphere
23 3300021441 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 Metagenome Rhizosphere
24 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
25 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
26 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
27 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
28 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
29 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
30 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
33 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
34 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
35 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
36 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
37 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
38 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
39 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
40 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
41 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
42 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
43 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
44 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
45 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
46 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
47 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
48 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
49 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
50 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
51 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
52 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
53 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
54 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
55 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
56 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
57 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
58 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
59 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
60 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
61 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
62 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
63 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
64 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
65 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
66 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
67 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
68 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
69 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
70 3300038725 Seagrass microbial communities from Seahorse Key, FL, USA - HV0818 Metagenome Unclassified
71 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
72 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
73 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
74 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
75 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
76 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
77 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
78 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
79 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
80 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
81 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
82 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
83 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
84 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
85 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
86 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
87 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
88 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
89 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
90 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
91 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
92 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
93 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
94 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
95 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
96 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
97 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
98 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
99 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
100 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
101 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
102 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
103 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.1
Nodule 0
Rhizoplane 1.1
Rhizosphere 96.69
Stem 0
Stem Tuber 0
Unclassified 1.1

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootL2_10031423 3300003322 Bacteria 4723
2 Ga0070683_100013997 3300005329 Bacteria 7006
3 Ga0070683_100049443 3300005329 Bacteria 3889
4 Ga0070683_100153052 3300005329 Bacteria 2186
5 Ga0070680_100026809 3300005336 Bacteria 4609
6 Ga0070691_10017096 3300005341 Bacteria 3338
7 Ga0070675_100122614 3300005354 Bacteria 2209
8 Ga0070675_100129891 3300005354 Unclassified 2146
9 Ga0070675_100232186 3300005354 Bacteria 1610
10 Ga0070681_10001800 3300005458 Bacteria 19268
11 Ga0070679_100000688 3300005530 Bacteria 29006
12 Ga0070679_100059377 3300005530 Bacteria 3812
13 Ga0070684_100043159 3300005535 Bacteria 3893
14 Ga0070684_100048232 3300005535 Bacteria 3694
15 Ga0070684_100535975 3300005535 Bacteria 1086
16 Ga0068853_100319560 3300005539 Bacteria 1439
17 Ga0068855_100486798 3300005563 Bacteria 1342
18 Ga0070664_100105747 3300005564 Bacteria 2451
19 Ga0068856_100126687 3300005614 Bacteria 2557
20 Ga0068859_100143387 3300005617 Bacteria 2462
21 Ga0068859_100345579 3300005617 Bacteria 1582
22 Ga0075430_100073037 3300006846 Bacteria 2877
23 Ga0075431_100121757 3300006847 Unclassified 2692
24 Ga0075429_100020107 3300006880 Bacteria 5790
25 Ga0097620_100143375 3300006931 Bacteria 2462
26 Ga0097620_100345564 3300006931 Bacteria 1582
27 Ga0111539_10015702 3300009094 Bacteria 9413
28 Ga0111539_10056666 3300009094 Bacteria 4656
29 Ga0105237_10005034 3300009545 Bacteria 15047
30 Ga0105238_10102095 3300009551 Bacteria 2850
31 Ga0157369_10273627 3300013105 Bacteria 1759
32 Ga0213873_10005458 3300021358 Bacteria 2441
33 Ga0213871_10010203 3300021441 Bacteria 2125
34 Ga0207707_10025193 3300025912 Bacteria 5203
35 Ga0207671_10045579 3300025914 Bacteria 3243
36 Ga0207660_10062518 3300025917 Bacteria 2682
37 Ga0207652_10133033 3300025921 Bacteria 2219
38 Ga0207694_10296010 3300025924 Bacteria 1332
39 Ga0207659_10020833 3300025926 Bacteria 4341
40 Ga0207659_10144015 3300025926 Bacteria 1853
41 Ga0207659_10256581 3300025926 Bacteria 1421
42 Ga0207661_10025505 3300025944 Bacteria 4494
43 Ga0207661_10032792 3300025944 Bacteria 4028
44 Ga0207661_10117011 3300025944 Bacteria 2263
45 Ga0207661_10273357 3300025944 Bacteria 1508
46 Ga0207679_10053499 3300025945 Bacteria 2967
47 Ga0207639_10489837 3300026041 Bacteria 1122
48 Ga0207698_10532217 3300026142 Unclassified 1149
49 Ga0207428_10019804 3300027907 Bacteria 5731
50 Ga0268265_10639657 3300028380 Bacteria 1021
51 Ga0265319_1000298 3300028563 Bacteria 36808
52 Ga0265319_1001390 3300028563 Bacteria 14517
53 Ga0265319_1002067 3300028563 Bacteria 11278
54 Ga0265319_1003423 3300028563 Bacteria 8271
55 Ga0265319_1007365 3300028563 Bacteria 4959
56 Ga0265319_1040772 3300028563 Bacteria 1569
57 Ga0265334_10016626 3300028573 Bacteria 3041
58 Ga0265318_10000022 3300028577 Bacteria 162885
59 Ga0265318_10001039 3300028577 Bacteria 17605
60 Ga0265318_10002611 3300028577 Bacteria 9515
61 Ga0265318_10028611 3300028577 Bacteria 2178
62 Ga0265323_10005320 3300028653 Bacteria 5469
63 Ga0265323_10013396 3300028653 Bacteria 3270
64 Ga0265323_10024471 3300028653 Bacteria 2294
65 Ga0265322_10024488 3300028654 Bacteria 1726
66 Ga0265336_10008430 3300028666 Bacteria 3616
67 Ga0265338_10002809 3300028800 Bacteria 25418
68 Ga0265338_10251822 3300028800 Bacteria 1303
69 Ga0265324_10017012 3300029957 Bacteria 2647
70 Ga0265324_10026196 3300029957 Bacteria 2064
71 Ga0265330_10025823 3300031235 Bacteria 2661
72 Ga0265330_10030998 3300031235 Bacteria 2397
73 Ga0265330_10032999 3300031235 Bacteria 2318
74 Ga0265330_10046429 3300031235 Bacteria 1914
75 Ga0265332_10114768 3300031238 Bacteria 1133
76 Ga0265328_10031193 3300031239 Bacteria 1982
77 Ga0265320_10003928 3300031240 Bacteria 9823
78 Ga0265320_10006554 3300031240 Bacteria 7324
79 Ga0265320_10010072 3300031240 Bacteria 5653
80 Ga0265339_10169442 3300031249 Bacteria 1094
81 Ga0265339_10175663 3300031249 Bacteria 1069
82 Ga0265331_10007136 3300031250 Bacteria 6501
83 Ga0265331_10023135 3300031250 Bacteria 3162
84 Ga0265327_10152013 3300031251 Bacteria 1074
85 Ga0265316_10007295 3300031344 Bacteria 10427
86 Ga0265316_10039033 3300031344 Bacteria 3817
87 Ga0265316_10085604 3300031344 Bacteria 2411
88 Ga0265316_10123873 3300031344 Bacteria 1951
89 Ga0265316_10237910 3300031344 Bacteria 1339
90 Ga0265316_10242249 3300031344 Bacteria 1326
91 Ga0307408_100618764 3300031548 Bacteria 964
92 Ga0265313_10001132 3300031595 Bacteria 25503
93 Ga0265313_10003568 3300031595 Bacteria 12510
94 Ga0265313_10005413 3300031595 Bacteria 9409
95 Ga0265313_10034076 3300031595 Bacteria 2579
96 Ga0265314_10000881 3300031711 Bacteria 35782
97 Ga0265314_10008598 3300031711 Bacteria 8731
98 Ga0265314_10009809 3300031711 Bacteria 8041
99 Ga0265314_10010352 3300031711 Bacteria 7786
100 Ga0265314_10043904 3300031711 Bacteria 3173
101 Ga0265314_10061416 3300031711 Bacteria 2559
102 Ga0265314_10064246 3300031711 Bacteria 2486
103 Ga0265314_10109072 3300031711 Bacteria 1762
104 Ga0265314_10110086 3300031711 Bacteria 1752
105 Ga0265342_10015308 3300031712 Bacteria 5051
106 Ga0265342_10109683 3300031712 Bacteria 1563
107 Ga0316576_10071713 3300031727 Bacteria 2555
108 Ga0316576_10109880 3300031727 Bacteria 2066
109 Ga0316578_10049004 3300031728 Bacteria 2468
110 Ga0307409_100173787 3300031995 Bacteria 1899
111 Ga0307416_100043446 3300032002 Bacteria 3519
112 Ga0307411_10237323 3300032005 Bacteria 1425
113 Ga0316574_0067503 3300035398 Unclassified 2255
114 Ga0373924_0028774 3300035410 Bacteria 2216
115 Ga0373935_0071992 3300035692 Bacteria 2231
116 Ga0373927_0349549 3300035695 Bacteria 974
117 Ga0316582_0024456 3300036647 Unclassified 3615
118 Ga0316582_0052775 3300036647 Bacteria 2585
119 Ga0316584_0005371 3300036712 Bacteria 8594
120 Ga0316584_0258888 3300036712 Bacteria 1269
121 Ga0395899_0002064 3300037312 Bacteria 16532
122 Ga0395900_0071485 3300037418 Bacteria 3567
123 Ga0395901_0073612 3300038443 Bacteria 3563
124 Ga0400484_08901 3300038725 Bacteria 15347
125 Ga0436360_1215675 3300039438 Bacteria 4867
126 Ga0436361_0664655 3300039447 Bacteria 9136
127 Ga0436362_0179235 3300039453 Bacteria 8128
128 Ga0453684_0129131 3300044712 Bacteria 3035
129 Ga0453684_0195547 3300044712 Bacteria 2362
130 Ga0453684_0318299 3300044712 Bacteria 1763
131 Ga0453684_0562975 3300044712 Bacteria 1254
132 Ga0466968_0033776 3300044735 Bacteria 2132
133 Ga0451576_0000052 3300045051 Bacteria 310414
134 Ga0451576_0000269 3300045051 Bacteria 127079
135 Ga0451576_0002035 3300045051 Bacteria 31917
136 Ga0451576_0087106 3300045051 Bacteria 3248
137 Ga0451576_0154877 3300045051 Bacteria 2390
138 Ga0466967_0271745 3300045976 Unclassified 1624
139 Ga0466967_0369091 3300045976 Unclassified 1392
140 Ga0495653_0012492 3300046463 Bacteria 6935
141 Ga0496106_0187203 3300048909 Bacteria 1645
142 Ga0496115_0000615 3300048918 Bacteria 27047
143 Ga0501031_0018305 3300049568 Bacteria 4559
144 Ga0501032_0002525 3300049569 Bacteria 14321
145 Ga0501032_0029637 3300049569 Bacteria 3754
146 Ga0501033_0003333 3300049570 Bacteria 13268
147 Ga0501033_0009298 3300049570 Bacteria 7571
148 Ga0501034_0008300 3300049571 Bacteria 10994
149 Ga0501034_0605390 3300049571 Bacteria 1001
150 Ga0501037_0051552 3300049573 Bacteria 3009
151 Ga0501038_0045841 3300049574 Bacteria 3793
152 Ga0501039_0131139 3300049575 Bacteria 1967
153 Ga0501042_0132808 3300049578 Bacteria 1794
154 Ga0501043_0162827 3300049579 Bacteria 1743
155 Ga0501043_0290880 3300049579 Bacteria 1250
156 Ga0501046_0002606 3300049580 Bacteria 16839
157 Ga0501046_0045034 3300049580 Bacteria 3507
158 Ga0501046_0068555 3300049580 Bacteria 2760
159 Ga0501047_0002284 3300049581 Bacteria 18338
160 Ga0501047_0012020 3300049581 Bacteria 8193
161 Ga0501047_0043701 3300049581 Bacteria 4328
162 Ga0501047_0266686 3300049581 Bacteria 1559
163 Ga0501048_0073087 3300049582 Bacteria 2420
164 Ga0501070_0074915 3300049586 Bacteria 2802
165 Ga0501070_0260680 3300049586 Bacteria 1417
166 Ga0501070_0293061 3300049586 Bacteria 1326
167 Ga0501080_0052138 3300049742 Bacteria 3808
168 Ga0501083_0000605 3300049744 Bacteria 23117
169 Ga0501083_0250530 3300049744 Bacteria 1153
170 Ga0501035_0003857 3300049822 Bacteria 14296
171 Ga0501035_0039596 3300049822 Bacteria 4264
172 Ga0501035_0053772 3300049822 Bacteria 3599
173 Ga0501035_0084955 3300049822 Bacteria 2791
174 Ga0501044_0003441 3300049823 Bacteria 17840
175 nmdc:mga0qj67_139993_c1 3300050509 Bacteria 1962
176 nmdc:mga08y16_7521_c1 3300050511 Bacteria 11407
177 nmdc:mga08y16_99293_c1 3300050511 Bacteria 3031
178 Ga0500595_000035 3300053119 Bacteria 106463
179 Ga0500622_0023003 3300053156 Bacteria 3301
180 Ga0501084_0111072 3300054114 Unclassified 2304
181 Ga0501082_0496948 3300060353 Bacteria 1066

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300049823 Ga0501044_0003441 Ga0501044_0003441_2391_3269 251
2 3300054114 Ga0501084_0111072 Ga0501084_0111072_511_1383 260
3 3300031251 Ga0265327_10152013 Ga0265327_101520131 262
4 3300031711 Ga0265314_10109072 Ga0265314_101090722 262
5 3300005354 Ga0070675_100122614 Ga0070675_1001226143 264
6 3300005617 Ga0068859_100345579 Ga0068859_1003455792 264
7 3300006931 Ga0097620_100345564 Ga0097620_1003455642 264
8 3300025926 Ga0207659_10020833 Ga0207659_100208335 264
9 3300036647 Ga0316582_0024456 Ga0316582_0024456_1565_2407 265
10 3300028800 Ga0265338_10002809 Ga0265338_1000280925 267
11 3300029957 Ga0265324_10017012 Ga0265324_100170123 267
12 3300005354 Ga0070675_100232186 Ga0070675_1002321862 268
13 3300005617 Ga0068859_100143387 Ga0068859_1001433872 268
14 3300006931 Ga0097620_100143375 Ga0097620_1001433752 268
15 3300025926 Ga0207659_10144015 Ga0207659_101440152 268
16 3300028380 Ga0268265_10639657 Ga0268265_106396571 268
17 3300032002 Ga0307416_100043446 Ga0307416_1000434462 268
18 3300049586 Ga0501070_0260680 Ga0501070_0260680_30_866 268
19 3300031711 Ga0265314_10043904 Ga0265314_100439042 270
20 3300009094 Ga0111539_10056666 Ga0111539_100566663 271
21 3300031727 Ga0316576_10071713 Ga0316576_100717133 271
22 3300031728 Ga0316578_10049004 Ga0316578_100490042 271
23 3300036647 Ga0316582_0052775 Ga0316582_0052775_933_1775 271
24 3300036712 Ga0316584_0005371 Ga0316584_0005371_5647_6489 271
25 3300046463 Ga0495653_0012492 Ga0495653_0012492_2260_3120 271
26 3300050511 nmdc:mga08y16_99293_c1 nmdc:mga08y16_99293_c1_1789_2709 271
27 3300053119 Ga0500595_000035 Ga0500595_000035_18736_19575 273
28 3300031727 Ga0316576_10109880 Ga0316576_101098802 274
29 3300045051 Ga0451576_0000052 Ga0451576_0000052_180982_181812 274
30 3300035410 Ga0373924_0028774 Ga0373924_0028774_75_920 276
31 3300036712 Ga0316584_0258888 Ga0316584_0258888_391_1227 276
32 3300045051 Ga0451576_0087106 Ga0451576_0087106_331_1209 276
33 3300050509 nmdc:mga0qj67_139993_c1 nmdc:mga0qj67_139993_c1_454_1320 276
34 3300006846 Ga0075430_100073037 Ga0075430_1000730373 277
35 3300009094 Ga0111539_10015702 Ga0111539_100157026 277
36 3300027907 Ga0207428_10019804 Ga0207428_100198046 277
37 3300037312 Ga0395899_0002064 Ga0395899_0002064_5546_6385 277
38 3300037418 Ga0395900_0071485 Ga0395900_0071485_1900_2739 277
39 3300038443 Ga0395901_0073612 Ga0395901_0073612_2388_3227 277
40 3300050511 nmdc:mga08y16_7521_c1 nmdc:mga08y16_7521_c1_6711_7631 277
41 3300005329 Ga0070683_100049443 Ga0070683_1000494434 278
42 3300005329 Ga0070683_100153052 Ga0070683_1001530522 278
43 3300005336 Ga0070680_100026809 Ga0070680_1000268094 278
44 3300005341 Ga0070691_10017096 Ga0070691_100170961 278
45 3300005354 Ga0070675_100129891 Ga0070675_1001298912 278
46 3300005458 Ga0070681_10001800 Ga0070681_1000180013 278
47 3300005530 Ga0070679_100000688 Ga0070679_10000068817 278
48 3300005535 Ga0070684_100043159 Ga0070684_1000431594 278
49 3300005535 Ga0070684_100048232 Ga0070684_1000482324 278
50 3300005535 Ga0070684_100535975 Ga0070684_1005359751 278
51 3300005564 Ga0070664_100105747 Ga0070664_1001057471 278
52 3300006847 Ga0075431_100121757 Ga0075431_1001217572 278
53 3300006880 Ga0075429_100020107 Ga0075429_1000201072 278
54 3300009545 Ga0105237_10005034 Ga0105237_1000503412 278
55 3300009551 Ga0105238_10102095 Ga0105238_101020951 278
56 3300025912 Ga0207707_10025193 Ga0207707_100251934 278
57 3300025914 Ga0207671_10045579 Ga0207671_100455791 278
58 3300025917 Ga0207660_10062518 Ga0207660_100625182 278
59 3300025921 Ga0207652_10133033 Ga0207652_101330332 278
60 3300025924 Ga0207694_10296010 Ga0207694_102960101 278
61 3300025926 Ga0207659_10256581 Ga0207659_102565811 278
62 3300025944 Ga0207661_10032792 Ga0207661_100327922 278
63 3300025944 Ga0207661_10117011 Ga0207661_101170113 278
64 3300025944 Ga0207661_10273357 Ga0207661_102733572 278
65 3300025945 Ga0207679_10053499 Ga0207679_100534991 278
66 3300026142 Ga0207698_10532217 Ga0207698_105322171 278
67 3300028563 Ga0265319_1001390 Ga0265319_100139011 278
68 3300028577 Ga0265318_10001039 Ga0265318_100010393 278
69 3300031240 Ga0265320_10003928 Ga0265320_100039283 278
70 3300031995 Ga0307409_100173787 Ga0307409_1001737872 278
71 3300032005 Ga0307411_10237323 Ga0307411_102373232 278
72 3300045976 Ga0466967_0271745 Ga0466967_0271745_297_1232 278
73 3300045976 Ga0466967_0369091 Ga0466967_0369091_370_1305 278
74 3300005530 Ga0070679_100059377 Ga0070679_1000593773 279
75 3300028563 Ga0265319_1000298 Ga0265319_100029812 279
76 3300028563 Ga0265319_1003423 Ga0265319_10034235 279
77 3300028577 Ga0265318_10002611 Ga0265318_100026115 279
78 3300028654 Ga0265322_10024488 Ga0265322_100244881 279
79 3300031239 Ga0265328_10031193 Ga0265328_100311932 279
80 3300031240 Ga0265320_10006554 Ga0265320_100065547 279
81 3300031249 Ga0265339_10169442 Ga0265339_101694422 279
82 3300031344 Ga0265316_10123873 Ga0265316_101238732 279
83 3300031548 Ga0307408_100618764 Ga0307408_1006187641 279
84 3300031595 Ga0265313_10005413 Ga0265313_100054134 279
85 3300031711 Ga0265314_10010352 Ga0265314_100103523 279
86 3300048909 Ga0496106_0187203 Ga0496106_0187203_407_1390 279
87 3300048918 Ga0496115_0000615 Ga0496115_0000615_15130_16113 279
88 3300053156 Ga0500622_0023003 Ga0500622_0023003_1441_2280 279
89 3300028563 Ga0265319_1040772 Ga0265319_10407722 280
90 3300035398 Ga0316574_0067503 Ga0316574_0067503_1171_2019 280
91 3300044712 Ga0453684_0129131 Ga0453684_0129131_1601_2443 280
92 3300045051 Ga0451576_0000269 Ga0451576_0000269_117727_118569 280
93 3300049571 Ga0501034_0605390 Ga0501034_0605390_79_978 280
94 3300049579 Ga0501043_0162827 Ga0501043_0162827_277_1176 280
95 3300049581 Ga0501047_0266686 Ga0501047_0266686_424_1323 280
96 3300049822 Ga0501035_0084955 Ga0501035_0084955_600_1499 280
97 3300021358 Ga0213873_10005458 Ga0213873_100054581 281
98 3300021441 Ga0213871_10010203 Ga0213871_100102032 281
99 3300028563 Ga0265319_1007365 Ga0265319_10073655 281
100 3300028800 Ga0265338_10251822 Ga0265338_102518221 281
101 3300031250 Ga0265331_10023135 Ga0265331_100231353 281
102 3300031711 Ga0265314_10110086 Ga0265314_101100862 281
103 3300031712 Ga0265342_10109683 Ga0265342_101096831 281
104 3300039438 Ga0436360_1215675 Ga0436360_1215675_2873_3760 281
105 3300039447 Ga0436361_0664655 Ga0436361_0664655_6685_7572 281
106 3300039453 Ga0436362_0179235 Ga0436362_0179235_5699_6586 281
107 3300049571 Ga0501034_0008300 Ga0501034_0008300_3376_4221 281
108 3300005329 Ga0070683_100013997 Ga0070683_1000139975 282
109 3300005539 Ga0068853_100319560 Ga0068853_1003195602 282
110 3300005563 Ga0068855_100486798 Ga0068855_1004867982 282
111 3300005614 Ga0068856_100126687 Ga0068856_1001266871 282
112 3300013105 Ga0157369_10273627 Ga0157369_102736272 282
113 3300025944 Ga0207661_10025505 Ga0207661_100255053 282
114 3300026041 Ga0207639_10489837 Ga0207639_104898372 282
115 3300028563 Ga0265319_1002067 Ga0265319_10020675 282
116 3300028573 Ga0265334_10016626 Ga0265334_100166262 282
117 3300028577 Ga0265318_10000022 Ga0265318_1000002222 282
118 3300028577 Ga0265318_10028611 Ga0265318_100286112 282
119 3300028653 Ga0265323_10005320 Ga0265323_100053205 282
120 3300028653 Ga0265323_10013396 Ga0265323_100133962 282
121 3300028653 Ga0265323_10024471 Ga0265323_100244712 282
122 3300028666 Ga0265336_10008430 Ga0265336_100084303 282
123 3300029957 Ga0265324_10026196 Ga0265324_100261962 282
124 3300031235 Ga0265330_10025823 Ga0265330_100258232 282
125 3300031235 Ga0265330_10030998 Ga0265330_100309981 282
126 3300031235 Ga0265330_10032999 Ga0265330_100329992 282
127 3300031235 Ga0265330_10046429 Ga0265330_100464291 282
128 3300031238 Ga0265332_10114768 Ga0265332_101147682 282
129 3300031240 Ga0265320_10010072 Ga0265320_100100722 282
130 3300031249 Ga0265339_10175663 Ga0265339_101756631 282
131 3300031250 Ga0265331_10007136 Ga0265331_100071365 282
132 3300031344 Ga0265316_10007295 Ga0265316_100072958 282
133 3300031344 Ga0265316_10039033 Ga0265316_100390333 282
134 3300031344 Ga0265316_10085604 Ga0265316_100856042 282
135 3300031344 Ga0265316_10237910 Ga0265316_102379102 282
136 3300031595 Ga0265313_10001132 Ga0265313_1000113220 282
137 3300031595 Ga0265313_10003568 Ga0265313_100035682 282
138 3300031595 Ga0265313_10034076 Ga0265313_100340762 282
139 3300031711 Ga0265314_10000881 Ga0265314_1000088119 282
140 3300031711 Ga0265314_10008598 Ga0265314_100085985 282
141 3300031711 Ga0265314_10009809 Ga0265314_100098093 282
142 3300031711 Ga0265314_10061416 Ga0265314_100614162 282
143 3300031711 Ga0265314_10064246 Ga0265314_100642462 282
144 3300031712 Ga0265342_10015308 Ga0265342_100153083 282
145 3300035692 Ga0373935_0071992 Ga0373935_0071992_943_1791 282
146 3300044712 Ga0453684_0195547 Ga0453684_0195547_1274_2122 282
147 3300044712 Ga0453684_0318299 Ga0453684_0318299_262_1119 282
148 3300044712 Ga0453684_0562975 Ga0453684_0562975_116_964 282
149 3300044735 Ga0466968_0033776 Ga0466968_0033776_159_1046 282
150 3300045051 Ga0451576_0002035 Ga0451576_0002035_29863_30717 282
151 3300045051 Ga0451576_0154877 Ga0451576_0154877_817_1665 282
152 3300049568 Ga0501031_0018305 Ga0501031_0018305_1164_2021 282
153 3300049569 Ga0501032_0002525 Ga0501032_0002525_12282_13139 282
154 3300049569 Ga0501032_0029637 Ga0501032_0029637_1068_1919 282
155 3300049570 Ga0501033_0003333 Ga0501033_0003333_836_1687 282
156 3300049570 Ga0501033_0009298 Ga0501033_0009298_731_1588 282
157 3300049573 Ga0501037_0051552 Ga0501037_0051552_1392_2249 282
158 3300049574 Ga0501038_0045841 Ga0501038_0045841_731_1588 282
159 3300049575 Ga0501039_0131139 Ga0501039_0131139_489_1346 282
160 3300049578 Ga0501042_0132808 Ga0501042_0132808_731_1588 282
161 3300049579 Ga0501043_0290880 Ga0501043_0290880_54_911 282
162 3300049580 Ga0501046_0002606 Ga0501046_0002606_6304_7155 282
163 3300049580 Ga0501046_0045034 Ga0501046_0045034_1106_1954 282
164 3300049580 Ga0501046_0068555 Ga0501046_0068555_346_1203 282
165 3300049581 Ga0501047_0002284 Ga0501047_0002284_15003_15851 282
166 3300049581 Ga0501047_0012020 Ga0501047_0012020_1758_2609 282
167 3300049581 Ga0501047_0043701 Ga0501047_0043701_1700_2551 282
168 3300049582 Ga0501048_0073087 Ga0501048_0073087_400_1257 282
169 3300049586 Ga0501070_0074915 Ga0501070_0074915_1481_2332 282
170 3300049586 Ga0501070_0293061 Ga0501070_0293061_360_1217 282
171 3300049742 Ga0501080_0052138 Ga0501080_0052138_1731_2582 282
172 3300049744 Ga0501083_0000605 Ga0501083_0000605_13641_14498 282
173 3300049744 Ga0501083_0250530 Ga0501083_0250530_268_1125 282
174 3300049822 Ga0501035_0003857 Ga0501035_0003857_4165_5013 282
175 3300049822 Ga0501035_0039596 Ga0501035_0039596_1368_2219 282
176 3300049822 Ga0501035_0053772 Ga0501035_0053772_1183_2040 282
177 3300060353 Ga0501082_0496948 Ga0501082_0496948_10_867 282
178 3300035695 Ga0373927_0349549 Ga0373927_0349549_109_960 283
179 3300038725 Ga0400484_08901 Ga0400484_08901_1465_2361 283
180 3300003322 rootL2_10031423 rootL2_100314232 284
181 3300031344 Ga0265316_10242249 Ga0265316_102422492 284

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02749

QRPTase_N

Quinolinate phosphoribosyl transferase, N-terminal domain

69

154

0.99

PF01729

QRPTase_C

Quinolinate phosphoribosyl transferase, C-terminal domain

156

322

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
7xgn-assembly1.cif.gz_B quinolinate phosphoribosyl transferase (qaprtase) from streptomyces pyridomyceticus nrrl b-2517 in complex with nicotinic acid (na) 0.9599 4 278
1qpn-assembly1.cif.gz_A quinolinate phosphoribosyl transferase from mycobacterium tuberculosis in complex with ncnn 0.9547 7 275
1x1o-assembly1.cif.gz_A crystal structure of project id tt0268 from thermus thermophilus hb8 0.9543 5 278
3tqv-assembly1.cif.gz_B structure of the nicotinate-nucleotide pyrophosphorylase from francisella tularensis. 0.951 4 278
3tqv-assembly1.cif.gz_A structure of the nicotinate-nucleotide pyrophosphorylase from francisella tularensis. 0.9493 4 278
ID Description Score Start End Superfamily
af_P30011_147_280_3.90.1170.20 Alpha Beta;Alpha-Beta Complex;Aldehyde Oxidoreductase; domain 3;Quinolinate phosphoribosyl transferase, N-terminal domain 0.9748 127 261 3.90.1170.20
af_Q9ZU32_47_153_3.90.1170.20 Alpha Beta;Alpha-Beta Complex;Aldehyde Oxidoreductase; domain 3;Quinolinate phosphoribosyl transferase, N-terminal domain 0.9695 10 113 3.90.1170.20
af_P30011_147_280_3.90.1170.20 Alpha Beta;Alpha-Beta Complex;Aldehyde Oxidoreductase; domain 3;Quinolinate phosphoribosyl transferase, N-terminal domain 0.9677 127 261 3.90.1170.20
1x1oB01 Alpha Beta;Alpha-Beta Complex;Aldehyde Oxidoreductase; domain 3;Quinolinate phosphoribosyl transferase, N-terminal domain 0.9602 5 124 3.90.1170.20
3tqvB02 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9563 121 266 3.20.20.70
ID Description Score Start End GO Terms
AF-A0A1H1KYJ8-F1-model_v4 nicotinate-nucleotide diphosphorylase (carboxylating) (EC 2.4.2.19) (Quinolinate phosphoribosyltransferase [decarboxylating]) 0.9893 1 279 GO:0004514
GO:0005737
GO:0009435
GO:0034213
AF-A0A661J4I3-F1-model_v4 Nicotinate-nucleotide diphosphorylase (Carboxylating) 0.9869 3 135 GO:0004514
GO:0005737
GO:0009435
GO:0034213
AF-A0A3C1F4K1-F1-model_v4 Nicotinate-nucleotide diphosphorylase (Carboxylating) (EC 2.4.2.19) 0.9865 7 171 GO:0004514
GO:0005737
GO:0009435
GO:0034213
AF-A0A7C6UB48-F1-model_v4 Nicotinate-nucleotide diphosphorylase (Carboxylating) 0.9864 7 147 GO:0004514
GO:0005737
GO:0009435
GO:0034213
AF-A0A3D3NTL4-F1-model_v4 Nicotinate-nucleotide diphosphorylase (Carboxylating) (EC 2.4.2.19) 0.9864 4 87 GO:0004514

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pLDDT pTM Quality
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Predicted Structure (AlphaFold2)

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