F277880
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 181 | 138 | 179 | 178 |
Family's Representative Sequence
| Representative Sequence | 3300045976|Ga0466967_0019389|Ga0466967_0019389_657_1259 |
| Length | 200 |
| Sequence | MQRAASTAADNGWLTIEQPTLPRKLFRKYLPQPESVLAKPWCAPFRPWLSHPSLWHLNRRSVAGAVAIGLFCGLIPGPFQMLGALLVSIPLRRNIPVALAVTLYTNPLTIVPLYLLAYGYGRLLLGESAAPGAAPFEWEWKNVADSVAGLSHWAASLGKPLFVGLPALAVTLAVLGYLVVDVAWRAYVIVSWRRRSRLRG |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 2526164512 | Azovibrio restrictus DSM 23866 | Isolate | Unclassified |
| 2 | 2547132512 | Azospira oryzae 6a3 | Isolate | Unclassified |
| 3 | 3300003323 | Sugarcane root Sample H1 | Metagenome | Unclassified |
| 4 | 3300005329 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG | Metagenome | Rhizosphere |
| 5 | 3300005331 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG | Metagenome | Rhizosphere |
| 6 | 3300005334 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 | Metagenome | Rhizosphere |
| 7 | 3300005340 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG | Metagenome | Rhizosphere |
| 8 | 3300005343 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG | Metagenome | Rhizosphere |
| 9 | 3300005347 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG | Metagenome | Rhizosphere |
| 10 | 3300005355 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG | Metagenome | Rhizosphere |
| 11 | 3300005439 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG | Metagenome | Rhizosphere |
| 12 | 3300005440 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG | Metagenome | Rhizosphere |
| 13 | 3300005444 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG | Metagenome | Rhizosphere |
| 14 | 3300005549 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG | Metagenome | Rhizosphere |
| 15 | 3300005614 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 | Metagenome | Rhizosphere |
| 16 | 3300005843 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 | Metagenome | Rhizosphere |
| 17 | 3300005844 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 | Metagenome | Rhizosphere |
| 18 | 3300006042 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 | Metagenome | Endosphere |
| 19 | 3300006048 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 | Metagenome | Endosphere |
| 20 | 3300006173 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG | Metagenome | Rhizosphere |
| 21 | 3300006175 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG | Metagenome | Rhizosphere |
| 22 | 3300006178 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 | Metagenome | Endosphere |
| 23 | 3300006186 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 | Metagenome | Endosphere |
| 24 | 3300006195 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 | Metagenome | Endosphere |
| 25 | 3300006353 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 | Metagenome | Endosphere |
| 26 | 3300006844 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 | Metagenome | Rhizosphere |
| 27 | 3300006847 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 | Metagenome | Rhizosphere |
| 28 | 3300006852 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 | Metagenome | Rhizosphere |
| 29 | 3300006871 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 | Metagenome | Rhizosphere |
| 30 | 3300006880 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 | Metagenome | Rhizosphere |
| 31 | 3300006914 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 | Metagenome | Rhizosphere |
| 32 | 3300007076 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 | Metagenome | Rhizosphere |
| 33 | 3300009094 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 34 | 3300009147 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 35 | 3300013307 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG | Metagenome | Rhizosphere |
| 36 | 3300025907 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 37 | 3300025908 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 38 | 3300025912 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 39 | 3300025923 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 40 | 3300026078 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 41 | 3300026095 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 42 | 3300026118 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 43 | 3300027876 | Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 44 | 3300027907 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) | Metagenome | Rhizosphere |
| 45 | 3300028381 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 46 | 3300029957 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG | Metagenome | Rhizosphere |
| 47 | 3300030521 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM | Metagenome | Unclassified |
| 48 | 3300031238 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG | Metagenome | Rhizosphere |
| 49 | 3300031251 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG | Metagenome | Rhizosphere |
| 50 | 3300031344 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG | Metagenome | Rhizosphere |
| 51 | 3300033179 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM | Metagenome | Unclassified |
| 52 | 3300035083 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 | Metagenome | Rhizosphere |
| 53 | 3300035111 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 | Metagenome | Rhizosphere |
| 54 | 3300035113 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 | Metagenome | Rhizosphere |
| 55 | 3300035116 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 | Metagenome | Rhizosphere |
| 56 | 3300035117 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 | Metagenome | Rhizosphere |
| 57 | 3300035118 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 | Metagenome | Rhizosphere |
| 58 | 3300035170 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 | Metagenome | Rhizosphere |
| 59 | 3300035171 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 | Metagenome | Rhizosphere |
| 60 | 3300035172 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 | Metagenome | Rhizosphere |
| 61 | 3300035410 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 | Metagenome | Rhizosphere |
| 62 | 3300035692 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 | Metagenome | Rhizosphere |
| 63 | 3300035695 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 | Metagenome | Rhizosphere |
| 64 | 3300035724 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 | Metagenome | Rhizosphere |
| 65 | 3300036401 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 | Metagenome | Rhizosphere |
| 66 | 3300037068 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 | Metagenome | Rhizosphere |
| 67 | 3300041496 | White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_4 MetaG | Metagenome | Unclassified |
| 68 | 3300041509 | White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_6 MetaG | Metagenome | Unclassified |
| 69 | 3300042001 | Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z081617_5542 | Metagenome | Rhizosphere |
| 70 | 3300042439 | Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z071817_5363 | Metagenome | Rhizosphere |
| 71 | 3300042876 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED | Metagenome | Rhizosphere |
| 72 | 3300044706 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R | Metagenome | Rhizosphere |
| 73 | 3300044712 | Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED | Metagenome | Rhizosphere |
| 74 | 3300045051 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED | Metagenome | Rhizosphere |
| 75 | 3300045976 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R | Metagenome | Rhizosphere |
| 76 | 3300046454 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere | Metagenome | Rhizosphere |
| 77 | 3300046455 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere | Metagenome | Rhizosphere |
| 78 | 3300046463 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere | Metagenome | Rhizosphere |
| 79 | 3300046472 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere | Metagenome | Rhizosphere |
| 80 | 3300046473 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere | Metagenome | Rhizosphere |
| 81 | 3300046475 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere | Metagenome | Rhizosphere |
| 82 | 3300046476 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere | Metagenome | Rhizosphere |
| 83 | 3300046511 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere | Metagenome | Rhizosphere |
| 84 | 3300046514 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere | Metagenome | Rhizosphere |
| 85 | 3300046516 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere | Metagenome | Rhizosphere |
| 86 | 3300046517 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere | Metagenome | Rhizosphere |
| 87 | 3300046526 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere | Metagenome | Rhizosphere |
| 88 | 3300046529 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere | Metagenome | Rhizosphere |
| 89 | 3300046533 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere | Metagenome | Rhizosphere |
| 90 | 3300046535 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere | Metagenome | Rhizosphere |
| 91 | 3300046537 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere | Metagenome | Rhizosphere |
| 92 | 3300046543 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere | Metagenome | Rhizosphere |
| 93 | 3300046559 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere | Metagenome | Rhizosphere |
| 94 | 3300046642 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere | Metagenome | Rhizosphere |
| 95 | 3300046663 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere | Metagenome | Rhizosphere |
| 96 | 3300046678 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere | Metagenome | Rhizosphere |
| 97 | 3300046681 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere | Metagenome | Rhizosphere |
| 98 | 3300046683 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere | Metagenome | Rhizosphere |
| 99 | 3300046689 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere | Metagenome | Rhizosphere |
| 100 | 3300046690 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere | Metagenome | Rhizosphere |
| 101 | 3300046809 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere | Metagenome | Rhizosphere |
| 102 | 3300047315 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere | Metagenome | Rhizosphere |
| 103 | 3300047317 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere | Metagenome | Rhizosphere |
| 104 | 3300047318 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere | Metagenome | Rhizosphere |
| 105 | 3300047319 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere | Metagenome | Rhizosphere |
| 106 | 3300047321 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere | Metagenome | Rhizosphere |
| 107 | 3300047322 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere | Metagenome | Rhizosphere |
| 108 | 3300049574 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 109 | 3300049575 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 110 | 3300049577 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 111 | 3300049585 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 | Metagenome | Rhizosphere |
| 112 | 3300049591 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 | Metagenome | Rhizosphere |
| 113 | 3300049592 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 | Metagenome | Rhizosphere |
| 114 | 3300049824 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 115 | 3300050489 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation | Metagenome | Endosphere |
| 116 | 3300050490 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation | Metagenome | Endosphere |
| 117 | 3300050491 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation | Metagenome | Endosphere |
| 118 | 3300050493 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation | Metagenome | Endosphere |
| 119 | 3300050494 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation | Metagenome | Endosphere |
| 120 | 3300050495 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation | Metagenome | Endosphere |
| 121 | 3300050496 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation | Metagenome | Endosphere |
| 122 | 3300050507 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation | Metagenome | Rhizosphere |
| 123 | 3300050508 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation | Metagenome | Rhizosphere |
| 124 | 3300050510 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation | Metagenome | Rhizosphere |
| 125 | 3300050511 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation | Metagenome | Rhizosphere |
| 126 | 3300050512 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation | Metagenome | Rhizosphere |
| 127 | 3300050513 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation | Metagenome | Rhizosphere |
| 128 | 3300050514 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation | Metagenome | Rhizosphere |
| 129 | 3300050515 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation | Metagenome | Rhizosphere |
| 130 | 3300050516 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation | Metagenome | Endosphere |
| 131 | 3300053085 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere | Metagenome | Rhizosphere |
| 132 | 3300053090 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere | Metagenome | Endosphere |
| 133 | 3300053092 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere | Metagenome | Endosphere |
| 134 | 3300053118 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere | Metagenome | Endosphere |
| 135 | 3300053133 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 endosphere | Metagenome | Endosphere |
| 136 | 3300053139 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere | Metagenome | Endosphere |
| 137 | 3300053151 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere | Metagenome | Endosphere |
| 138 | 3300054114 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 | Metagenome | Rhizosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 98.9 |
| Metatranscriptomes | 0 |
| Isolates | 1.1 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 11.6 |
| Nodule | 0 |
| Rhizoplane | 0 |
| Rhizosphere | 84.53 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 3.87 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | rootH1_10330146 | 3300003323 | Bacteria | 1521 |
| 2 | Ga0070683_100201225 | 3300005329 | Bacteria | 1891 |
| 3 | Ga0070670_100572116 | 3300005331 | Bacteria | 1009 |
| 4 | Ga0068869_100151320 | 3300005334 | Bacteria | 1800 |
| 5 | Ga0068869_100501432 | 3300005334 | Bacteria | 1013 |
| 6 | Ga0070689_100082189 | 3300005340 | Bacteria | 2530 |
| 7 | Ga0070687_100300662 | 3300005343 | Bacteria | 1018 |
| 8 | Ga0070668_100379262 | 3300005347 | Unclassified | 1203 |
| 9 | Ga0070671_100844090 | 3300005355 | Bacteria | 799 |
| 10 | Ga0070711_100327784 | 3300005439 | Bacteria | 1225 |
| 11 | Ga0070705_100170181 | 3300005440 | Bacteria | 1465 |
| 12 | Ga0070705_100406158 | 3300005440 | Bacteria | 1010 |
| 13 | Ga0070694_100133595 | 3300005444 | Bacteria | 1795 |
| 14 | Ga0070694_100608346 | 3300005444 | Bacteria | 881 |
| 15 | Ga0070704_100611611 | 3300005549 | Bacteria | 959 |
| 16 | Ga0068856_100087127 | 3300005614 | Bacteria | 3104 |
| 17 | Ga0068856_100120480 | 3300005614 | Bacteria | 2625 |
| 18 | Ga0068860_100112538 | 3300005843 | Bacteria | 2603 |
| 19 | Ga0068862_100158866 | 3300005844 | Bacteria | 2016 |
| 20 | Ga0075368_10018681 | 3300006042 | Bacteria | 2608 |
| 21 | Ga0075363_100164480 | 3300006048 | Bacteria | 1257 |
| 22 | Ga0070716_100222474 | 3300006173 | Bacteria | 1269 |
| 23 | Ga0070712_100317937 | 3300006175 | Bacteria | 1265 |
| 24 | Ga0075367_10081161 | 3300006178 | Bacteria | 1962 |
| 25 | Ga0075369_10146527 | 3300006186 | Bacteria | 1078 |
| 26 | Ga0075366_10454679 | 3300006195 | Bacteria | 790 |
| 27 | Ga0075370_10112711 | 3300006353 | Bacteria | 1580 |
| 28 | Ga0075428_100115869 | 3300006844 | Bacteria | 2919 |
| 29 | Ga0075431_100002754 | 3300006847 | Bacteria | 17041 |
| 30 | Ga0075433_10018417 | 3300006852 | Bacteria | 5804 |
| 31 | Ga0075434_100016509 | 3300006871 | Bacteria | 7098 |
| 32 | Ga0075429_100000330 | 3300006880 | Bacteria | 34237 |
| 33 | Ga0075436_100007561 | 3300006914 | Bacteria | 7423 |
| 34 | Ga0075435_100002319 | 3300007076 | Bacteria | 12588 |
| 35 | Ga0111539_10590152 | 3300009094 | Bacteria | 1294 |
| 36 | Ga0114129_10001295 | 3300009147 | Bacteria | 33343 |
| 37 | Ga0157372_10353791 | 3300013307 | Bacteria | 1711 |
| 38 | Ga0207645_10066148 | 3300025907 | Bacteria | 2311 |
| 39 | Ga0207643_10062402 | 3300025908 | Unclassified | 2130 |
| 40 | Ga0207707_10211406 | 3300025912 | Bacteria | 1690 |
| 41 | Ga0207681_10357115 | 3300025923 | Unclassified | 1171 |
| 42 | Ga0207702_10095956 | 3300026078 | Bacteria | 2607 |
| 43 | Ga0207676_11611492 | 3300026095 | Bacteria | 647 |
| 44 | Ga0207675_100109645 | 3300026118 | Bacteria | 2604 |
| 45 | Ga0209974_10069860 | 3300027876 | Bacteria | 1197 |
| 46 | Ga0207428_10373481 | 3300027907 | Unclassified | 1047 |
| 47 | Ga0268264_10492201 | 3300028381 | Bacteria | 1194 |
| 48 | Ga0265324_10123971 | 3300029957 | Unclassified | 877 |
| 49 | Ga0307511_10000014 | 3300030521 | Bacteria | 127602 |
| 50 | Ga0265332_10000176 | 3300031238 | Bacteria | 52656 |
| 51 | Ga0265332_10002868 | 3300031238 | Bacteria | 8526 |
| 52 | Ga0265327_10016002 | 3300031251 | Bacteria | 4798 |
| 53 | Ga0265327_10091120 | 3300031251 | Bacteria | 1486 |
| 54 | Ga0265316_10078328 | 3300031344 | Bacteria | 2537 |
| 55 | Ga0307507_10041755 | 3300033179 | Bacteria | 4584 |
| 56 | Ga0373926_0185399 | 3300035083 | Bacteria | 798 |
| 57 | Ga0373923_0034516 | 3300035111 | Bacteria | 2054 |
| 58 | Ga0373923_0068985 | 3300035111 | Bacteria | 1515 |
| 59 | Ga0373923_0368882 | 3300035111 | Bacteria | 687 |
| 60 | Ga0373936_0035327 | 3300035113 | Bacteria | 1989 |
| 61 | Ga0373945_0039906 | 3300035116 | Bacteria | 1693 |
| 62 | Ga0373953_0206239 | 3300035117 | Unclassified | 850 |
| 63 | Ga0373954_0000001 | 3300035118 | Bacteria | 158201 |
| 64 | Ga0373943_0009478 | 3300035170 | Bacteria | 4363 |
| 65 | Ga0373943_0181631 | 3300035170 | Bacteria | 1156 |
| 66 | Ga0373946_0007186 | 3300035171 | Bacteria | 4066 |
| 67 | Ga0373946_0080987 | 3300035171 | Bacteria | 1421 |
| 68 | Ga0373955_0050484 | 3300035172 | Bacteria | 2262 |
| 69 | Ga0373924_0027576 | 3300035410 | Bacteria | 2259 |
| 70 | Ga0373924_0290270 | 3300035410 | Bacteria | 726 |
| 71 | Ga0373935_0063905 | 3300035692 | Bacteria | 2359 |
| 72 | Ga0373935_0196595 | 3300035692 | Bacteria | 1391 |
| 73 | Ga0373927_0030361 | 3300035695 | Bacteria | 3526 |
| 74 | Ga0373927_0333859 | 3300035695 | Bacteria | 998 |
| 75 | Ga0373933_0020280 | 3300035724 | Bacteria | 3767 |
| 76 | Ga0373933_0465719 | 3300035724 | Bacteria | 827 |
| 77 | Ga0373937_0002088 | 3300036401 | Bacteria | 16721 |
| 78 | Ga0373937_0005335 | 3300036401 | Bacteria | 10990 |
| 79 | Ga0373925_0076901 | 3300037068 | Bacteria | 2532 |
| 80 | Ga0373925_0566908 | 3300037068 | Bacteria | 934 |
| 81 | Ga0373925_0571177 | 3300037068 | Bacteria | 930 |
| 82 | Ga0451839_0425677 | 3300041496 | Bacteria | 728 |
| 83 | Ga0451843_0414118 | 3300041509 | Bacteria | 600 |
| 84 | Ga0439441_056712 | 3300042001 | Bacteria | 817 |
| 85 | Ga0439464_0057297 | 3300042439 | Bacteria | 1136 |
| 86 | Ga0451577_0000384 | 3300042876 | Bacteria | 82022 |
| 87 | Ga0451577_0013183 | 3300042876 | Bacteria | 7746 |
| 88 | Ga0451577_0062038 | 3300042876 | Bacteria | 3333 |
| 89 | Ga0451577_0113681 | 3300042876 | Unclassified | 2423 |
| 90 | Ga0451577_0280822 | 3300042876 | Bacteria | 1509 |
| 91 | Ga0466964_0025043 | 3300044706 | Bacteria | 2328 |
| 92 | Ga0453684_0000005 | 3300044712 | Bacteria | 1431632 |
| 93 | Ga0453684_0000511 | 3300044712 | Bacteria | 150804 |
| 94 | Ga0453684_0007018 | 3300044712 | Bacteria | 21044 |
| 95 | Ga0453684_0050795 | 3300044712 | Bacteria | 5448 |
| 96 | Ga0453684_0225746 | 3300044712 | Bacteria | 2166 |
| 97 | Ga0453684_0411833 | 3300044712 | Bacteria | 1512 |
| 98 | Ga0453684_0458073 | 3300044712 | Bacteria | 1419 |
| 99 | Ga0453684_0467944 | 3300044712 | Bacteria | 1400 |
| 100 | Ga0451576_0008102 | 3300045051 | Bacteria | 12385 |
| 101 | Ga0451576_0087877 | 3300045051 | Bacteria | 3233 |
| 102 | Ga0451576_0220178 | 3300045051 | Bacteria | 1982 |
| 103 | Ga0451576_0264838 | 3300045051 | Bacteria | 1797 |
| 104 | Ga0451576_0830099 | 3300045051 | Bacteria | 970 |
| 105 | Ga0466967_0019389 | 3300045976 | Bacteria | 5468 |
| 106 | Ga0495592_0033193 | 3300046454 | Bacteria | 3893 |
| 107 | Ga0495603_0063986 | 3300046455 | Bacteria | 2169 |
| 108 | Ga0495653_0085803 | 3300046463 | Bacteria | 2315 |
| 109 | Ga0495580_0010221 | 3300046472 | Bacteria | 7321 |
| 110 | Ga0495582_0019464 | 3300046473 | Bacteria | 3712 |
| 111 | Ga0495639_0077281 | 3300046475 | Bacteria | 1545 |
| 112 | Ga0495662_0014061 | 3300046476 | Bacteria | 3896 |
| 113 | Ga0495608_0000699 | 3300046511 | Bacteria | 23284 |
| 114 | Ga0495618_0005634 | 3300046514 | Bacteria | 7613 |
| 115 | Ga0495628_0039967 | 3300046516 | Bacteria | 3750 |
| 116 | Ga0495628_0214858 | 3300046516 | Bacteria | 1446 |
| 117 | Ga0495630_0020802 | 3300046517 | Bacteria | 4842 |
| 118 | Ga0495630_0433548 | 3300046517 | Bacteria | 1007 |
| 119 | Ga0495666_0001314 | 3300046526 | Bacteria | 12011 |
| 120 | Ga0495666_0018116 | 3300046526 | Bacteria | 3507 |
| 121 | Ga0495652_0024334 | 3300046529 | Bacteria | 5361 |
| 122 | Ga0495640_0016283 | 3300046533 | Bacteria | 5564 |
| 123 | Ga0495586_0004476 | 3300046535 | Bacteria | 7462 |
| 124 | Ga0495586_0052256 | 3300046535 | Bacteria | 2212 |
| 125 | Ga0495598_0017583 | 3300046537 | Bacteria | 1846 |
| 126 | Ga0495598_0026495 | 3300046537 | Bacteria | 1590 |
| 127 | Ga0495598_0112584 | 3300046537 | Bacteria | 914 |
| 128 | Ga0495645_0065131 | 3300046543 | Bacteria | 2636 |
| 129 | Ga0495667_0015049 | 3300046559 | Bacteria | 5222 |
| 130 | Ga0495634_0020503 | 3300046642 | Bacteria | 4687 |
| 131 | Ga0495635_0010179 | 3300046663 | Bacteria | 6575 |
| 132 | Ga0495599_0011173 | 3300046678 | Bacteria | 5512 |
| 133 | Ga0495647_0000629 | 3300046681 | Bacteria | 10406 |
| 134 | Ga0495658_0001812 | 3300046683 | Bacteria | 10957 |
| 135 | Ga0495658_0052190 | 3300046683 | Bacteria | 2318 |
| 136 | Ga0495613_0005871 | 3300046689 | Bacteria | 9186 |
| 137 | Ga0495624_0017062 | 3300046690 | Bacteria | 4880 |
| 138 | Ga0495600_0002776 | 3300046809 | Bacteria | 10157 |
| 139 | Ga0495581_0239780 | 3300047315 | Bacteria | 1060 |
| 140 | Ga0495604_0000911 | 3300047317 | Bacteria | 24567 |
| 141 | Ga0495604_0311110 | 3300047317 | Bacteria | 1055 |
| 142 | Ga0495636_0002487 | 3300047318 | Bacteria | 7065 |
| 143 | Ga0495674_0242657 | 3300047319 | Bacteria | 1484 |
| 144 | Ga0495676_0174540 | 3300047321 | Bacteria | 1510 |
| 145 | Ga0495680_0001752 | 3300047322 | Bacteria | 23001 |
| 146 | Ga0501038_0102035 | 3300049574 | Bacteria | 2388 |
| 147 | Ga0501039_0874618 | 3300049575 | Bacteria | 700 |
| 148 | Ga0501041_0304699 | 3300049577 | Bacteria | 1004 |
| 149 | Ga0501069_0718132 | 3300049585 | Bacteria | 603 |
| 150 | Ga0501075_0490188 | 3300049591 | Bacteria | 938 |
| 151 | Ga0501076_0021660 | 3300049592 | Bacteria | 4933 |
| 152 | Ga0501045_0020438 | 3300049824 | Bacteria | 4728 |
| 153 | Ga0501045_0755914 | 3300049824 | Unclassified | 716 |
| 154 | nmdc:mga03683_185731_c1 | 3300050489 | Bacteria | 950 |
| 155 | nmdc:mga03n38_51428_c1 | 3300050490 | Bacteria | 1840 |
| 156 | nmdc:mga00v17_145951_c1 | 3300050491 | Bacteria | 1519 |
| 157 | nmdc:mga0k408_42510_c1 | 3300050493 | Bacteria | 2618 |
| 158 | nmdc:mga06z11_39883_c1 | 3300050494 | Bacteria | 2340 |
| 159 | nmdc:mga04h51_52211_c1 | 3300050495 | Bacteria | 1376 |
| 160 | nmdc:mga07m45_131640_c1 | 3300050496 | Bacteria | 1447 |
| 161 | nmdc:mga07m45_26068_c1 | 3300050496 | Bacteria | 3211 |
| 162 | nmdc:mga05p37_1757_c1 | 3300050507 | Bacteria | 25294 |
| 163 | nmdc:mga09592_2866_c1 | 3300050508 | Bacteria | 13984 |
| 164 | nmdc:mga06r32_9959_c1 | 3300050510 | Bacteria | 8577 |
| 165 | nmdc:mga08y16_210878_c1 | 3300050511 | Bacteria | 2012 |
| 166 | nmdc:mga08y16_603120_c1 | 3300050511 | Unclassified | 1107 |
| 167 | nmdc:mga0n895_151590_c1 | 3300050512 | Bacteria | 2349 |
| 168 | nmdc:mga0rr50_6074_c1 | 3300050513 | Bacteria | 7300 |
| 169 | nmdc:mga08x19_8685_c1 | 3300050514 | Bacteria | 6058 |
| 170 | nmdc:mga0a205_4256_c1 | 3300050515 | Bacteria | 12848 |
| 171 | nmdc:mga0sz30_65314_c1 | 3300050516 | Bacteria | 1560 |
| 172 | Ga0495619_0033086 | 3300053085 | Bacteria | 3357 |
| 173 | Ga0500646_0003660 | 3300053090 | Bacteria | 3937 |
| 174 | Ga0500583_0059773 | 3300053092 | Bacteria | 1795 |
| 175 | Ga0500594_0133620 | 3300053118 | Bacteria | 787 |
| 176 | Ga0500655_016798 | 3300053133 | Bacteria | 1349 |
| 177 | Ga0500568_0031887 | 3300053139 | Bacteria | 2170 |
| 178 | Ga0500604_0005964 | 3300053151 | Bacteria | 3215 |
| 179 | Ga0501084_0077231 | 3300054114 | Bacteria | 2792 |
Family Sequences
| Sample | Scaffold | Protein | Protein Length | |
|---|---|---|---|---|
| 1 | 3300006186 | Ga0075369_10146527 | Ga0075369_101465272 | 139 |
| 2 | 3300006353 | Ga0075370_10112711 | Ga0075370_101127112 | 139 |
| 3 | 3300053118 | Ga0500594_0133620 | Ga0500594_0133620_195_761 | 142 |
| 4 | 3300050496 | nmdc:mga07m45_131640_c1 | nmdc:mga07m45_131640_c1_420_986 | 148 |
| 5 | 3300050516 | nmdc:mga0sz30_65314_c1 | nmdc:mga0sz30_65314_c1_339_905 | 148 |
| 6 | 3300005331 | Ga0070670_100572116 | Ga0070670_1005721161 | 149 |
| 7 | 3300005347 | Ga0070668_100379262 | Ga0070668_1003792622 | 149 |
| 8 | 3300005844 | Ga0068862_100158866 | Ga0068862_1001588662 | 149 |
| 9 | 3300025907 | Ga0207645_10066148 | Ga0207645_100661483 | 149 |
| 10 | 3300025908 | Ga0207643_10062402 | Ga0207643_100624022 | 149 |
| 11 | 3300025923 | Ga0207681_10357115 | Ga0207681_103571151 | 149 |
| 12 | 3300027907 | Ga0207428_10373481 | Ga0207428_103734811 | 149 |
| 13 | 3300050511 | nmdc:mga08y16_603120_c1 | nmdc:mga08y16_603120_c1_455_1006 | 149 |
| 14 | 3300006195 | Ga0075366_10454679 | Ga0075366_104546791 | 151 |
| 15 | 3300042876 | Ga0451577_0000384 | Ga0451577_0000384_71500_72069 | 151 |
| 16 | 3300044712 | Ga0453684_0000005 | Ga0453684_0000005_891840_892409 | 151 |
| 17 | 3300026095 | Ga0207676_11611492 | Ga0207676_116114921 | 154 |
| 18 | 3300005440 | Ga0070705_100170181 | Ga0070705_1001701812 | 156 |
| 19 | 3300030521 | Ga0307511_10000014 | Ga0307511_1000001470 | 159 |
| 20 | 3300049577 | Ga0501041_0304699 | Ga0501041_0304699_468_989 | 159 |
| 21 | 3300053090 | Ga0500646_0003660 | Ga0500646_0003660_677_1246 | 159 |
| 22 | 3300053092 | Ga0500583_0059773 | Ga0500583_0059773_411_980 | 159 |
| 23 | 3300053133 | Ga0500655_016798 | Ga0500655_016798_251_820 | 159 |
| 24 | 3300053139 | Ga0500568_0031887 | Ga0500568_0031887_1002_1571 | 159 |
| 25 | 3300053151 | Ga0500604_0005964 | Ga0500604_0005964_1546_2115 | 159 |
| 26 | 3300005549 | Ga0070704_100611611 | Ga0070704_1006116112 | 160 |
| 27 | 3300036401 | Ga0373937_0005335 | Ga0373937_0005335_4724_5260 | 160 |
| 28 | 3300046454 | Ga0495592_0033193 | Ga0495592_0033193_2936_3472 | 160 |
| 29 | 3300046463 | Ga0495653_0085803 | Ga0495653_0085803_850_1386 | 160 |
| 30 | 3300046476 | Ga0495662_0014061 | Ga0495662_0014061_1250_1786 | 160 |
| 31 | 3300046511 | Ga0495608_0000699 | Ga0495608_0000699_8385_8921 | 160 |
| 32 | 3300046514 | Ga0495618_0005634 | Ga0495618_0005634_6340_6876 | 160 |
| 33 | 3300046516 | Ga0495628_0039967 | Ga0495628_0039967_2956_3492 | 160 |
| 34 | 3300046517 | Ga0495630_0020802 | Ga0495630_0020802_896_1432 | 160 |
| 35 | 3300046526 | Ga0495666_0001314 | Ga0495666_0001314_6796_7332 | 160 |
| 36 | 3300046529 | Ga0495652_0024334 | Ga0495652_0024334_4552_5088 | 160 |
| 37 | 3300046533 | Ga0495640_0016283 | Ga0495640_0016283_2415_2951 | 160 |
| 38 | 3300046535 | Ga0495586_0004476 | Ga0495586_0004476_3208_3744 | 160 |
| 39 | 3300046537 | Ga0495598_0112584 | Ga0495598_0112584_208_756 | 160 |
| 40 | 3300046543 | Ga0495645_0065131 | Ga0495645_0065131_1999_2535 | 160 |
| 41 | 3300046559 | Ga0495667_0015049 | Ga0495667_0015049_2958_3494 | 160 |
| 42 | 3300046642 | Ga0495634_0020503 | Ga0495634_0020503_1196_1732 | 160 |
| 43 | 3300046663 | Ga0495635_0010179 | Ga0495635_0010179_3299_3835 | 160 |
| 44 | 3300046678 | Ga0495599_0011173 | Ga0495599_0011173_2729_3265 | 160 |
| 45 | 3300046683 | Ga0495658_0001812 | Ga0495658_0001812_8664_9200 | 160 |
| 46 | 3300046689 | Ga0495613_0005871 | Ga0495613_0005871_8392_8928 | 160 |
| 47 | 3300046690 | Ga0495624_0017062 | Ga0495624_0017062_4086_4622 | 160 |
| 48 | 3300046809 | Ga0495600_0002776 | Ga0495600_0002776_3092_3628 | 160 |
| 49 | 3300047315 | Ga0495581_0239780 | Ga0495581_0239780_85_621 | 160 |
| 50 | 3300047317 | Ga0495604_0000911 | Ga0495604_0000911_13702_14238 | 160 |
| 51 | 3300047318 | Ga0495636_0002487 | Ga0495636_0002487_2431_2967 | 160 |
| 52 | 3300047319 | Ga0495674_0242657 | Ga0495674_0242657_223_759 | 160 |
| 53 | 3300047322 | Ga0495680_0001752 | Ga0495680_0001752_17336_17872 | 160 |
| 54 | 3300050489 | nmdc:mga03683_185731_c1 | nmdc:mga03683_185731_c1_308_898 | 160 |
| 55 | 3300050491 | nmdc:mga00v17_145951_c1 | nmdc:mga00v17_145951_c1_517_1107 | 160 |
| 56 | 3300050493 | nmdc:mga0k408_42510_c1 | nmdc:mga0k408_42510_c1_994_1584 | 160 |
| 57 | 3300050495 | nmdc:mga04h51_52211_c1 | nmdc:mga04h51_52211_c1_281_871 | 160 |
| 58 | 3300050496 | nmdc:mga07m45_26068_c1 | nmdc:mga07m45_26068_c1_807_1397 | 160 |
| 59 | 3300053085 | Ga0495619_0033086 | Ga0495619_0033086_1803_2339 | 160 |
| 60 | 3300046537 | Ga0495598_0017583 | Ga0495598_0017583_913_1449 | 161 |
| 61 | iso_pu_bacteria | 2526164512 | 2526210715 | 161 |
| 62 | 3300006042 | Ga0075368_10018681 | Ga0075368_100186813 | 162 |
| 63 | 3300006048 | Ga0075363_100164480 | Ga0075363_1001644802 | 162 |
| 64 | 3300006178 | Ga0075367_10081161 | Ga0075367_100811611 | 162 |
| 65 | 3300031238 | Ga0265332_10000176 | Ga0265332_1000017620 | 162 |
| 66 | 3300005444 | Ga0070694_100133595 | Ga0070694_1001335952 | 163 |
| 67 | 3300046516 | Ga0495628_0214858 | Ga0495628_0214858_398_985 | 163 |
| 68 | iso_pu_bacteria | 2547132512 | 2548847552 | 163 |
| 69 | 3300005343 | Ga0070687_100300662 | Ga0070687_1003006622 | 164 |
| 70 | 3300005355 | Ga0070671_100844090 | Ga0070671_1008440901 | 164 |
| 71 | 3300005440 | Ga0070705_100406158 | Ga0070705_1004061581 | 164 |
| 72 | 3300042001 | Ga0439441_056712 | Ga0439441_056712_100_651 | 164 |
| 73 | 3300042876 | Ga0451577_0113681 | Ga0451577_0113681_1440_1964 | 164 |
| 74 | 3300044712 | Ga0453684_0458073 | Ga0453684_0458073_302_826 | 164 |
| 75 | 3300049824 | Ga0501045_0755914 | Ga0501045_0755914_109_672 | 164 |
| 76 | 3300029957 | Ga0265324_10123971 | Ga0265324_101239712 | 165 |
| 77 | 3300031344 | Ga0265316_10078328 | Ga0265316_100783282 | 165 |
| 78 | 3300035724 | Ga0373933_0465719 | Ga0373933_0465719_125_673 | 165 |
| 79 | 3300037068 | Ga0373925_0566908 | Ga0373925_0566908_292_828 | 165 |
| 80 | 3300041509 | Ga0451843_0414118 | Ga0451843_0414118_26_562 | 165 |
| 81 | 3300044712 | Ga0453684_0007018 | Ga0453684_0007018_812_1339 | 165 |
| 82 | 3300044712 | Ga0453684_0225746 | Ga0453684_0225746_1227_1769 | 165 |
| 83 | 3300044712 | Ga0453684_0411833 | Ga0453684_0411833_709_1260 | 165 |
| 84 | 3300045051 | Ga0451576_0008102 | Ga0451576_0008102_5538_6074 | 165 |
| 85 | 3300045051 | Ga0451576_0087877 | Ga0451576_0087877_1648_2181 | 165 |
| 86 | 3300045051 | Ga0451576_0220178 | Ga0451576_0220178_228_779 | 165 |
| 87 | 3300045051 | Ga0451576_0264838 | Ga0451576_0264838_1070_1606 | 165 |
| 88 | 3300031238 | Ga0265332_10002868 | Ga0265332_100028686 | 166 |
| 89 | 3300031251 | Ga0265327_10091120 | Ga0265327_100911202 | 166 |
| 90 | 3300035111 | Ga0373923_0068985 | Ga0373923_0068985_410_997 | 166 |
| 91 | 3300035117 | Ga0373953_0206239 | Ga0373953_0206239_206_793 | 166 |
| 92 | 3300035118 | Ga0373954_0000001 | Ga0373954_0000001_62998_63585 | 166 |
| 93 | 3300035172 | Ga0373955_0050484 | Ga0373955_0050484_808_1395 | 166 |
| 94 | 3300035410 | Ga0373924_0027576 | Ga0373924_0027576_1124_1711 | 166 |
| 95 | 3300035724 | Ga0373933_0020280 | Ga0373933_0020280_1640_2227 | 166 |
| 96 | 3300036401 | Ga0373937_0002088 | Ga0373937_0002088_13111_13698 | 166 |
| 97 | 3300042876 | Ga0451577_0013183 | Ga0451577_0013183_3820_4392 | 166 |
| 98 | 3300045051 | Ga0451576_0830099 | Ga0451576_0830099_23_568 | 166 |
| 99 | 3300047317 | Ga0495604_0311110 | Ga0495604_0311110_425_1012 | 166 |
| 100 | 3300005329 | Ga0070683_100201225 | Ga0070683_1002012251 | 167 |
| 101 | 3300005439 | Ga0070711_100327784 | Ga0070711_1003277841 | 167 |
| 102 | 3300005614 | Ga0068856_100120480 | Ga0068856_1001204802 | 167 |
| 103 | 3300006173 | Ga0070716_100222474 | Ga0070716_1002224742 | 167 |
| 104 | 3300006175 | Ga0070712_100317937 | Ga0070712_1003179372 | 167 |
| 105 | 3300006844 | Ga0075428_100115869 | Ga0075428_1001158692 | 167 |
| 106 | 3300006847 | Ga0075431_100002754 | Ga0075431_1000027543 | 167 |
| 107 | 3300006880 | Ga0075429_100000330 | Ga0075429_10000033024 | 167 |
| 108 | 3300009147 | Ga0114129_10001295 | Ga0114129_1000129517 | 167 |
| 109 | 3300013307 | Ga0157372_10353791 | Ga0157372_103537912 | 167 |
| 110 | 3300025912 | Ga0207707_10211406 | Ga0207707_102114063 | 167 |
| 111 | 3300026078 | Ga0207702_10095956 | Ga0207702_100959562 | 167 |
| 112 | 3300035111 | Ga0373923_0368882 | Ga0373923_0368882_51_608 | 167 |
| 113 | 3300035410 | Ga0373924_0290270 | Ga0373924_0290270_147_704 | 167 |
| 114 | 3300044706 | Ga0466964_0025043 | Ga0466964_0025043_1752_2294 | 167 |
| 115 | 3300044712 | Ga0453684_0000511 | Ga0453684_0000511_9705_10274 | 167 |
| 116 | 3300044712 | Ga0453684_0050795 | Ga0453684_0050795_159_710 | 167 |
| 117 | 3300045976 | Ga0466967_0019389 | Ga0466967_0019389_657_1259 | 167 |
| 118 | 3300049574 | Ga0501038_0102035 | Ga0501038_0102035_1475_2020 | 167 |
| 119 | 3300049592 | Ga0501076_0021660 | Ga0501076_0021660_829_1374 | 167 |
| 120 | 3300049824 | Ga0501045_0020438 | Ga0501045_0020438_704_1249 | 167 |
| 121 | 3300050507 | nmdc:mga05p37_1757_c1 | nmdc:mga05p37_1757_c1_17356_17907 | 167 |
| 122 | 3300050508 | nmdc:mga09592_2866_c1 | nmdc:mga09592_2866_c1_2715_3266 | 167 |
| 123 | 3300050510 | nmdc:mga06r32_9959_c1 | nmdc:mga06r32_9959_c1_5672_6223 | 167 |
| 124 | 3300054114 | Ga0501084_0077231 | Ga0501084_0077231_1931_2476 | 167 |
| 125 | 3300005334 | Ga0068869_100151320 | Ga0068869_1001513201 | 168 |
| 126 | 3300005334 | Ga0068869_100501432 | Ga0068869_1005014322 | 168 |
| 127 | 3300005340 | Ga0070689_100082189 | Ga0070689_1000821891 | 168 |
| 128 | 3300005444 | Ga0070694_100608346 | Ga0070694_1006083461 | 168 |
| 129 | 3300005614 | Ga0068856_100087127 | Ga0068856_1000871273 | 168 |
| 130 | 3300005843 | Ga0068860_100112538 | Ga0068860_1001125382 | 168 |
| 131 | 3300006852 | Ga0075433_10018417 | Ga0075433_100184172 | 168 |
| 132 | 3300006871 | Ga0075434_100016509 | Ga0075434_1000165094 | 168 |
| 133 | 3300006914 | Ga0075436_100007561 | Ga0075436_1000075612 | 168 |
| 134 | 3300007076 | Ga0075435_100002319 | Ga0075435_1000023194 | 168 |
| 135 | 3300009094 | Ga0111539_10590152 | Ga0111539_105901521 | 168 |
| 136 | 3300026118 | Ga0207675_100109645 | Ga0207675_1001096451 | 168 |
| 137 | 3300027876 | Ga0209974_10069860 | Ga0209974_100698602 | 168 |
| 138 | 3300028381 | Ga0268264_10492201 | Ga0268264_104922012 | 168 |
| 139 | 3300035083 | Ga0373926_0185399 | Ga0373926_0185399_139_687 | 168 |
| 140 | 3300035111 | Ga0373923_0034516 | Ga0373923_0034516_1489_2037 | 168 |
| 141 | 3300035113 | Ga0373936_0035327 | Ga0373936_0035327_330_881 | 168 |
| 142 | 3300035116 | Ga0373945_0039906 | Ga0373945_0039906_1033_1581 | 168 |
| 143 | 3300035170 | Ga0373943_0009478 | Ga0373943_0009478_161_709 | 168 |
| 144 | 3300035170 | Ga0373943_0181631 | Ga0373943_0181631_298_846 | 168 |
| 145 | 3300035171 | Ga0373946_0007186 | Ga0373946_0007186_3310_3858 | 168 |
| 146 | 3300035171 | Ga0373946_0080987 | Ga0373946_0080987_859_1407 | 168 |
| 147 | 3300035692 | Ga0373935_0063905 | Ga0373935_0063905_1702_2250 | 168 |
| 148 | 3300035692 | Ga0373935_0196595 | Ga0373935_0196595_588_1136 | 168 |
| 149 | 3300035695 | Ga0373927_0030361 | Ga0373927_0030361_2816_3364 | 168 |
| 150 | 3300035695 | Ga0373927_0333859 | Ga0373927_0333859_141_692 | 168 |
| 151 | 3300037068 | Ga0373925_0076901 | Ga0373925_0076901_270_818 | 168 |
| 152 | 3300037068 | Ga0373925_0571177 | Ga0373925_0571177_264_812 | 168 |
| 153 | 3300041496 | Ga0451839_0425677 | Ga0451839_0425677_43_594 | 168 |
| 154 | 3300042439 | Ga0439464_0057297 | Ga0439464_0057297_390_938 | 168 |
| 155 | 3300042876 | Ga0451577_0062038 | Ga0451577_0062038_94_666 | 168 |
| 156 | 3300042876 | Ga0451577_0280822 | Ga0451577_0280822_299_856 | 168 |
| 157 | 3300044712 | Ga0453684_0467944 | Ga0453684_0467944_688_1260 | 168 |
| 158 | 3300046455 | Ga0495603_0063986 | Ga0495603_0063986_1336_1884 | 168 |
| 159 | 3300046472 | Ga0495580_0010221 | Ga0495580_0010221_3098_3649 | 168 |
| 160 | 3300046473 | Ga0495582_0019464 | Ga0495582_0019464_1874_2425 | 168 |
| 161 | 3300046475 | Ga0495639_0077281 | Ga0495639_0077281_224_775 | 168 |
| 162 | 3300046517 | Ga0495630_0433548 | Ga0495630_0433548_342_893 | 168 |
| 163 | 3300046526 | Ga0495666_0018116 | Ga0495666_0018116_568_1119 | 168 |
| 164 | 3300046535 | Ga0495586_0052256 | Ga0495586_0052256_1563_2111 | 168 |
| 165 | 3300046537 | Ga0495598_0026495 | Ga0495598_0026495_350_910 | 168 |
| 166 | 3300046681 | Ga0495647_0000629 | Ga0495647_0000629_5099_5647 | 168 |
| 167 | 3300046683 | Ga0495658_0052190 | Ga0495658_0052190_1033_1581 | 168 |
| 168 | 3300047321 | Ga0495676_0174540 | Ga0495676_0174540_577_1125 | 168 |
| 169 | 3300049575 | Ga0501039_0874618 | Ga0501039_0874618_70_630 | 168 |
| 170 | 3300049585 | Ga0501069_0718132 | Ga0501069_0718132_22_579 | 168 |
| 171 | 3300049591 | Ga0501075_0490188 | Ga0501075_0490188_343_897 | 168 |
| 172 | 3300050511 | nmdc:mga08y16_210878_c1 | nmdc:mga08y16_210878_c1_54_602 | 168 |
| 173 | 3300050512 | nmdc:mga0n895_151590_c1 | nmdc:mga0n895_151590_c1_100_648 | 168 |
| 174 | 3300050513 | nmdc:mga0rr50_6074_c1 | nmdc:mga0rr50_6074_c1_6266_6814 | 168 |
| 175 | 3300050514 | nmdc:mga08x19_8685_c1 | nmdc:mga08x19_8685_c1_5399_5947 | 168 |
| 176 | 3300050515 | nmdc:mga0a205_4256_c1 | nmdc:mga0a205_4256_c1_8504_9052 | 168 |
| 177 | 3300003323 | rootH1_10330146 | rootH1_103301462 | 170 |
| 178 | 3300031251 | Ga0265327_10016002 | Ga0265327_100160025 | 170 |
| 179 | 3300033179 | Ga0307507_10041755 | Ga0307507_100417551 | 170 |
| 180 | 3300050490 | nmdc:mga03n38_51428_c1 | nmdc:mga03n38_51428_c1_181_771 | 170 |
| 181 | 3300050494 | nmdc:mga06z11_39883_c1 | nmdc:mga06z11_39883_c1_433_1023 | 170 |
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 3bp9-assembly3.cif.gz_P | structure of b-tropic mlv capsid n-terminal domain | 0.305 | 34 | 140 |
| 3bp9-assembly3.cif.gz_O | structure of b-tropic mlv capsid n-terminal domain | 0.2997 | 9 | 137 |
| 3bp9-assembly3.cif.gz_O | structure of b-tropic mlv capsid n-terminal domain | 0.2818 | 9 | 137 |
| 3bp9-assembly3.cif.gz_P | structure of b-tropic mlv capsid n-terminal domain | 0.2716 | 34 | 140 |
| 7br8-assembly1.cif.gz_g | epstein-barr virus, c5 penton vertex, catc absent. | 0.252 | 49 | 137 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| af_I1LQ93_116_258_1.20.140.150 | Mainly Alpha;Up-down Bundle;Butyryl-CoA Dehydrogenase, subunit A; domain 3; | 0.317 | 49 | 144 | 1.20.140.150 |
| af_Q9CPV7_94_244_1.10.287.70 | Mainly Alpha;Orthogonal Bundle;Helix Hairpins; | 0.2889 | 19 | 146 | 1.10.287.70 |
| 4dcnC00 | Mainly Alpha;Up-down Bundle;Substrate Binding Domain Of Dnak; Chain:A; Domain 2;Arfaptin homology (AH) domain/BAR domain | 0.2495 | 2 | 150 | 1.20.1270.60 |
| af_A0A0R4IF99_149_314_3.30.40.10 | Alpha Beta;2-Layer Sandwich;Herpes Virus-1;Zinc/RING finger domain, C3HC4 (zinc finger) | 0.2293 | 49 | 149 | 3.30.40.10 |
| af_I1LQ93_116_258_1.20.140.150 | Mainly Alpha;Up-down Bundle;Butyryl-CoA Dehydrogenase, subunit A; domain 3; | 0.2216 | 49 | 144 | 1.20.140.150 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A120DCU4-F1-model_v4 | deleted | 0.5946 | 47 | 152 |
|
| AF-A0A2V7TV53-F1-model_v4 | DUF2062 domain-containing protein | 0.5835 | 45 | 152 |
GO:0016020
|
| AF-A0A522V7C4-F1-model_v4 | DUF2062 domain-containing protein | 0.5556 | 51 | 155 |
GO:0016020
|
| AF-A0A1G1LBG9-F1-model_v4 | DUF2062 domain-containing protein | 0.5503 | 46 | 152 |
GO:0016020
|
| AF-A0A518CN70-F1-model_v4 | DUF2062 domain-containing protein | 0.5351 | 48 | 152 |
GO:0016020
|
Predicted Structure (AlphaFold2)
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