F276071

General Info

Members Datasets Scaffolds Average Seq Length
180 57 173 342

Family's Representative Sequence

Representative Sequence 3300044712|Ga0453684_0115583|Ga0453684_0115583_73_1206
Length 377
Sequence MAGTEEKCCSGLGAEGGGSGTETAERKSRVGRQAAILGGAVVVWWLVYGQLAPLAGWATYRLLGLEPGSHLADAVEFFLYDTPKVLMLLTLVVFGVGVIRSFFTAERTRRILAGKRESVGNVLAALLGIVTPFCSCSAVPLFIGFVTAGIPLGVTFSFLISAPMINEIALVLLYGLFGWRVAAIYLGTGLGIAILSGWVIGRLRMEAHVERWVYETKVGVGAVEIEPDWAGRLRCGAEAVRDIVAKVWLYVVLGIAVGAGIHGYVPENFMASIMGKGAWWSVPLAVLIGIPMYSNAAGMIPVVQALLGKGAALGTVLAFMMAVIGLSLPETIILRKVLRPRLIATFIAVVGMGILLVGYLFNALPLHEIVAAGRGIS

Samples

Sample ID Description Type Environment
1 2162886006 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v1 Metagenome Rhizosphere
2 2523231067 Pleomorphomonas oryzae DSM 16300 Isolate Unclassified
3 2523533628 Maridesulfovibrio zosterae DSM 11974 Isolate Rhizosphere
4 2526164512 Azovibrio restrictus DSM 23866 Isolate Unclassified
5 2547132512 Azospira oryzae 6a3 Isolate Unclassified
6 2740891818 Desulfofaba hansenii DSM 12642 Isolate Unclassified
7 2945961074 Pseudomonas sp. W2I6 Isolate Rhizosphere
8 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
9 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
10 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
11 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
12 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
13 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
14 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
15 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
16 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
17 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
18 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
19 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
20 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
21 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
22 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
23 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
24 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
25 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
26 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
27 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
28 3300032168 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
29 3300033524 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
30 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
31 3300035115 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_11 Metagenome Rhizosphere
32 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
33 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
34 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
35 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
36 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
37 3300037588 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA Metagenome Rhizosphere
38 3300041405 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z080117_5414 Metagenome Rhizosphere
39 3300041407 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z080117_5416 Metagenome Rhizosphere
40 3300042010 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z080117_5431 Metagenome Rhizosphere
41 3300042127 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC1030F_E14_070516_91 Metagenome Rhizosphere
42 3300042146 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0714D_E14_080116_2979 Metagenome Rhizosphere
43 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
44 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
45 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
46 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
47 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
48 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
49 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
50 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
51 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
52 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
53 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
54 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
55 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
56 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
57 640427133 Stutzerimonas stutzeri A1501 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 94.44
Metatranscriptomes 1.67
Isolates 3.89

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.56
Nodule 0
Rhizoplane 0
Rhizosphere 96.67
Stem 0
Stem Tuber 0
Unclassified 2.78

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 SwRhRL3b_contig_700513 2162886006 Bacteria 1535
2 SwRhRL3b_contig_769416 2162886006 Bacteria 1537
3 Ga0065165_1002344 3300005262 Bacteria 16462
4 Ga0065704_10072621 3300005289 Bacteria 8237
5 Ga0065707_10001089 3300005295 Bacteria 8095
6 Ga0068856_100000067 3300005614 Bacteria 98357
7 Ga0075435_100005419 3300007076 Bacteria 8904
8 Ga0207667_10041669 3300025949 Bacteria 4882
9 Ga0207702_10044908 3300026078 Bacteria 3715
10 Ga0265336_10002782 3300028666 Bacteria 7069
11 Ga0265338_10022606 3300028800 Bacteria 6502
12 Ga0265338_10070327 3300028800 Bacteria 3001
13 Ga0265338_10168600 3300028800 Bacteria 1682
14 Ga0265330_10010642 3300031235 Bacteria 4329
15 Ga0265330_10011018 3300031235 Bacteria 4245
16 Ga0265330_10020329 3300031235 Bacteria 3033
17 Ga0265332_10000069 3300031238 Bacteria 88113
18 Ga0265332_10059096 3300031238 Bacteria 1641
19 Ga0265329_10000669 3300031242 Bacteria 17567
20 Ga0265329_10054422 3300031242 Bacteria 1271
21 Ga0265339_10000665 3300031249 Bacteria 26605
22 Ga0265327_10001006 3300031251 Bacteria 40012
23 Ga0265316_10000003 3300031344 Bacteria 323632
24 Ga0265316_10002678 3300031344 Bacteria 18342
25 Ga0265316_10005249 3300031344 Bacteria 12650
26 Ga0265316_10029155 3300031344 Bacteria 4542
27 Ga0265342_10001716 3300031712 Bacteria 20044
28 Ga0265342_10045782 3300031712 Bacteria 2631
29 Ga0316578_10010058 3300031728 Bacteria 4894
30 Ga0307516_10232616 3300031730 Bacteria 1546
31 Ga0316577_10017513 3300031733 Bacteria 3957
32 Ga0316583_10000189 3300032133 Bacteria 15871
33 Ga0316583_10001864 3300032133 Bacteria 7177
34 Ga0316583_10022677 3300032133 Bacteria 2247
35 Ga0316593_10029671 3300032168 Bacteria 1771
36 Ga0316593_10054787 3300032168 Bacteria 1354
37 Ga0316592_1004348 3300033524 Bacteria 2629
38 Ga0373951_0001777 3300035091 Bacteria 5607
39 Ga0373941_0043518 3300035115 Bacteria 1398
40 Ga0373935_0309848 3300035692 Bacteria 1118
41 Ga0373933_0027771 3300035724 Bacteria 3262
42 Ga0373937_0324515 3300036401 Bacteria 1457
43 Ga0316582_0005996 3300036647 Bacteria 6330
44 Ga0316582_0075382 3300036647 Bacteria 2192
45 Ga0316584_0108457 3300036712 Bacteria 2077
46 Ga0316581_0003898 3300037588 Bacteria 3760
47 Ga0439438_000087 3300041405 Bacteria 42385
48 Ga0439447_008984 3300041407 Bacteria 3060
49 Ga0439452_021598 3300042010 Bacteria 1675
50 Ga0450890_000951 3300042127 Bacteria 4200
51 Ga0450907_000117 3300042146 Bacteria 30317
52 Ga0451577_0000149 3300042876 Bacteria 155208
53 Ga0451577_0000209 3300042876 Bacteria 122695
54 Ga0451577_0000253 3300042876 Bacteria 105800
55 Ga0451577_0000402 3300042876 Bacteria 78514
56 Ga0451577_0000444 3300042876 Bacteria 72637
57 Ga0451577_0000833 3300042876 Bacteria 46143
58 Ga0451577_0004438 3300042876 Bacteria 14812
59 Ga0451577_0008292 3300042876 Bacteria 10114
60 Ga0451577_0016647 3300042876 Bacteria 6802
61 Ga0451577_0031589 3300042876 Bacteria 4777
62 Ga0451577_0032671 3300042876 Bacteria 4688
63 Ga0451577_0036041 3300042876 Bacteria 4455
64 Ga0451577_0041039 3300042876 Bacteria 4155
65 Ga0451577_0061999 3300042876 Bacteria 3334
66 Ga0451577_0079741 3300042876 Bacteria 2919
67 Ga0451577_0086112 3300042876 Bacteria 2803
68 Ga0451577_0094850 3300042876 Bacteria 2664
69 Ga0451577_0268462 3300042876 Bacteria 1545
70 Ga0451577_0404870 3300042876 Bacteria 1238
71 Ga0453683_0000301 3300044673 Bacteria 62521
72 Ga0453683_0000906 3300044673 Bacteria 28376
73 Ga0453683_0008108 3300044673 Bacteria 7068
74 Ga0453683_0009811 3300044673 Bacteria 6380
75 Ga0453683_0032890 3300044673 Bacteria 3270
76 Ga0453683_0034867 3300044673 Bacteria 3172
77 Ga0453683_0054996 3300044673 Bacteria 2491
78 Ga0453683_0074470 3300044673 Bacteria 2126
79 Ga0453683_0075487 3300044673 Bacteria 2110
80 Ga0453683_0084616 3300044673 Bacteria 1987
81 Ga0453683_0090029 3300044673 Bacteria 1923
82 Ga0453683_0121974 3300044673 Bacteria 1641
83 Ga0453683_0145465 3300044673 Bacteria 1496
84 Ga0453684_0000006 3300044712 Bacteria 1364191
85 Ga0453684_0000019 3300044712 Bacteria 908702
86 Ga0453684_0000048 3300044712 Bacteria 559743
87 Ga0453684_0000060 3300044712 Archaea 492542
88 Ga0453684_0000063 3300044712 Bacteria 486079
89 Ga0453684_0000064 3300044712 Archaea 474306
90 Ga0453684_0000065 3300044712 Bacteria 468481
91 Ga0453684_0000114 3300044712 Bacteria 356610
92 Ga0453684_0000200 3300044712 Bacteria 263210
93 Ga0453684_0000209 3300044712 Bacteria 255543
94 Ga0453684_0000257 3300044712 Bacteria 228854
95 Ga0453684_0000362 3300044712 Bacteria 187378
96 Ga0453684_0000459 3300044712 Bacteria 163142
97 Ga0453684_0000494 3300044712 Bacteria 155208
98 Ga0453684_0000817 3300044712 Bacteria 105670
99 Ga0453684_0001174 3300044712 Bacteria 81261
100 Ga0453684_0001224 3300044712 Bacteria 78768
101 Ga0453684_0001463 3300044712 Bacteria 66902
102 Ga0453684_0001886 3300044712 Archaea 54458
103 Ga0453684_0004435 3300044712 Archaea 29628
104 Ga0453684_0011179 3300044712 Bacteria 15114
105 Ga0453684_0011237 3300044712 Bacteria 15070
106 Ga0453684_0011555 3300044712 Bacteria 14770
107 Ga0453684_0012779 3300044712 Bacteria 13771
108 Ga0453684_0019065 3300044712 Bacteria 10472
109 Ga0453684_0019714 3300044712 Bacteria 10239
110 Ga0453684_0022680 3300044712 Bacteria 9300
111 Ga0453684_0023672 3300044712 Bacteria 9025
112 Ga0453684_0028596 3300044712 Bacteria 7948
113 Ga0453684_0038763 3300044712 Archaea 6505
114 Ga0453684_0047451 3300044712 Bacteria 5696
115 Ga0453684_0047990 3300044712 Bacteria 5654
116 Ga0453684_0051870 3300044712 Bacteria 5370
117 Ga0453684_0058132 3300044712 Bacteria 4997
118 Ga0453684_0068110 3300044712 Bacteria 4521
119 Ga0453684_0074943 3300044712 Bacteria 4257
120 Ga0453684_0077445 3300044712 Bacteria 4167
121 Ga0453684_0080710 3300044712 Bacteria 4060
122 Ga0453684_0093143 3300044712 Bacteria 3712
123 Ga0453684_0093619 3300044712 Bacteria 3700
124 Ga0453684_0104357 3300044712 Bacteria 3461
125 Ga0453684_0107859 3300044712 Bacteria 3390
126 Ga0453684_0115583 3300044712 Bacteria 3251
127 Ga0453684_0125671 3300044712 Bacteria 3087
128 Ga0453684_0190978 3300044712 Bacteria 2396
129 Ga0453684_0196403 3300044712 Bacteria 2356
130 Ga0453684_0229437 3300044712 Bacteria 2144
131 Ga0453684_0238874 3300044712 Bacteria 2093
132 Ga0453684_0293329 3300044712 Bacteria 1851
133 Ga0453684_0296780 3300044712 Bacteria 1838
134 Ga0453684_0322015 3300044712 Bacteria 1750
135 Ga0453684_0333818 3300044712 Bacteria 1714
136 Ga0453684_0415175 3300044712 Bacteria 1504
137 Ga0453684_0535561 3300044712 Bacteria 1292
138 Ga0451576_0000076 3300045051 Bacteria 245246
139 Ga0451576_0000129 3300045051 Bacteria 191840
140 Ga0451576_0000424 3300045051 Bacteria 97297
141 Ga0451576_0000714 3300045051 Bacteria 66984
142 Ga0451576_0000869 3300045051 Bacteria 58069
143 Ga0451576_0001120 3300045051 Bacteria 48684
144 Ga0451576_0001381 3300045051 Bacteria 41721
145 Ga0451576_0002571 3300045051 Bacteria 26734
146 Ga0451576_0005308 3300045051 Bacteria 16194
147 Ga0451576_0005401 3300045051 Bacteria 16048
148 Ga0451576_0007335 3300045051 Bacteria 13225
149 Ga0451576_0014505 3300045051 Bacteria 8766
150 Ga0451576_0020591 3300045051 Bacteria 7178
151 Ga0451576_0023005 3300045051 Bacteria 6754
152 Ga0451576_0058337 3300045051 Bacteria 4034
153 Ga0451576_0066630 3300045051 Bacteria 3748
154 Ga0451576_0066932 3300045051 Bacteria 3739
155 Ga0451576_0077290 3300045051 Bacteria 3464
156 Ga0451576_0080373 3300045051 Bacteria 3391
157 Ga0451576_0092437 3300045051 Bacteria 3147
158 Ga0451576_0111368 3300045051 Bacteria 2849
159 Ga0451576_0123193 3300045051 Bacteria 2700
160 Ga0451576_0131224 3300045051 Bacteria 2612
161 Ga0451576_0238674 3300045051 Bacteria 1899
162 Ga0451576_0248133 3300045051 Bacteria 1860
163 Ga0451576_0283533 3300045051 Bacteria 1732
164 Ga0495630_0020096 3300046517 Bacteria 4919
165 Ga0495680_0031056 3300047322 Bacteria 4352
166 Ga0495684_0038851 3300047471 Bacteria 3648
167 Ga0501033_0000921 3300049570 Bacteria 26896
168 Ga0501073_0001764 3300049589 Bacteria 16083
169 Ga0501077_0053102 3300049593 Bacteria 2573
170 Ga0501035_0004935 3300049822 Bacteria 12655
171 Ga0501045_0099887 3300049824 Bacteria 2148
172 nmdc:mga0rr50_7867_c1 3300050513 Bacteria 6610
173 Ga0501082_0198417 3300060353 Bacteria 1746

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300044712 Ga0453684_0000048 Ga0453684_0000048_261923_262888 298
2 3300049570 Ga0501033_0000921 Ga0501033_0000921_11865_12926 301
3 3300049822 Ga0501035_0004935 Ga0501035_0004935_5804_6865 301
4 3300005262 Ga0065165_1002344 Ga0065165_10023443 304
5 3300044712 Ga0453684_0107859 Ga0453684_0107859_926_1873 306
6 3300042876 Ga0451577_0000253 Ga0451577_0000253_92957_94120 307
7 3300044712 Ga0453684_0000817 Ga0453684_0000817_92957_94120 307
8 3300044712 Ga0453684_0293329 Ga0453684_0293329_881_1804 307
9 3300042146 Ga0450907_000117 Ga0450907_000117_64_990 308
10 3300042876 Ga0451577_0000209 Ga0451577_0000209_54500_55540 308
11 3300044673 Ga0453683_0032890 Ga0453683_0032890_518_1558 308
12 3300044712 Ga0453684_0000362 Ga0453684_0000362_71368_72408 308
13 3300045051 Ga0451576_0058337 Ga0451576_0058337_1009_2049 308
14 3300031235 Ga0265330_10011018 Ga0265330_100110185 309
15 3300031242 Ga0265329_10054422 Ga0265329_100544222 309
16 3300031344 Ga0265316_10029155 Ga0265316_100291554 309
17 3300031712 Ga0265342_10045782 Ga0265342_100457824 309
18 3300045051 Ga0451576_0066932 Ga0451576_0066932_2513_3478 309
19 3300044712 Ga0453684_0038763 Ga0453684_0038763_1341_2300 310
20 3300044712 Ga0453684_0001886 Ga0453684_0001886_46835_47794 311
21 3300044712 Ga0453684_0004435 Ga0453684_0004435_1076_2035 312
22 3300042876 Ga0451577_0086112 Ga0451577_0086112_413_1465 314
23 3300044673 Ga0453683_0008108 Ga0453683_0008108_4027_4977 314
24 3300044712 Ga0453684_0019714 Ga0453684_0019714_8410_9360 314
25 3300044712 Ga0453684_0051870 Ga0453684_0051870_4116_5066 314
26 3300044712 Ga0453684_0104357 Ga0453684_0104357_1633_2583 314
27 3300045051 Ga0451576_0000129 Ga0451576_0000129_85889_86839 314
28 3300045051 Ga0451576_0023005 Ga0451576_0023005_801_1853 314
29 3300044712 Ga0453684_0000209 Ga0453684_0000209_114090_115037 315
30 3300044712 Ga0453684_0047990 Ga0453684_0047990_2958_3905 315
31 3300045051 Ga0451576_0092437 Ga0451576_0092437_1656_2690 316
32 3300031733 Ga0316577_10017513 Ga0316577_100175134 317
33 3300036647 Ga0316582_0075382 Ga0316582_0075382_916_1950 317
34 3300036712 Ga0316584_0108457 Ga0316584_0108457_831_1865 317
35 3300044712 Ga0453684_0011179 Ga0453684_0011179_3691_4644 317
36 3300044712 Ga0453684_0019065 Ga0453684_0019065_960_1913 317
37 3300044712 Ga0453684_0022680 Ga0453684_0022680_2891_3925 317
38 3300044712 Ga0453684_0080710 Ga0453684_0080710_1789_2742 317
39 3300042876 Ga0451577_0268462 Ga0451577_0268462_185_1171 318
40 3300044712 Ga0453684_0000060 Ga0453684_0000060_331892_332851 318
41 3300044712 Ga0453684_0000064 Ga0453684_0000064_111359_112318 318
42 3300044712 Ga0453684_0047451 Ga0453684_0047451_2592_3551 318
43 3300045051 Ga0451576_0238674 Ga0451576_0238674_159_1118 318
44 3300044673 Ga0453683_0075487 Ga0453683_0075487_11_976 319
45 3300044712 Ga0453684_0238874 Ga0453684_0238874_472_1515 319
46 3300032133 Ga0316583_10000189 Ga0316583_100001893 320
47 3300042876 Ga0451577_0000833 Ga0451577_0000833_34831_36003 320
48 3300044712 Ga0453684_0000006 Ga0453684_0000006_1295169_1296134 320
49 3300044712 Ga0453684_0000200 Ga0453684_0000200_248734_249906 320
50 3300044712 Ga0453684_0001224 Ga0453684_0001224_43855_44901 320
51 3300044712 Ga0453684_0074943 Ga0453684_0074943_1601_2647 320
52 3300044673 Ga0453683_0054996 Ga0453683_0054996_498_1550 321
53 3300045051 Ga0451576_0111368 Ga0451576_0111368_817_1881 321
54 3300049589 Ga0501073_0001764 Ga0501073_0001764_14543_15544 321
55 3300042876 Ga0451577_0008292 Ga0451577_0008292_3772_4764 322
56 3300044712 Ga0453684_0028596 Ga0453684_0028596_3345_4337 322
57 3300044712 Ga0453684_0296780 Ga0453684_0296780_334_1401 322
58 3300045051 Ga0451576_0005308 Ga0451576_0005308_7244_8236 322
59 3300028666 Ga0265336_10002782 Ga0265336_100027824 325
60 3300045051 Ga0451576_0000076 Ga0451576_0000076_156185_157243 325
61 3300045051 Ga0451576_0001120 Ga0451576_0001120_41272_42312 325
62 3300031238 Ga0265332_10059096 Ga0265332_100590962 327
63 3300007076 Ga0075435_100005419 Ga0075435_1000054194 328
64 3300035115 Ga0373941_0043518 Ga0373941_0043518_19_1038 328
65 3300044712 Ga0453684_0023672 Ga0453684_0023672_4086_5090 328
66 3300044712 Ga0453684_0196403 Ga0453684_0196403_834_1871 328
67 3300050513 nmdc:mga0rr50_7867_c1 nmdc:mga0rr50_7867_c1_3447_4466 328
68 3300005614 Ga0068856_100000067 Ga0068856_10000006717 329
69 3300025949 Ga0207667_10041669 Ga0207667_100416695 329
70 3300026078 Ga0207702_10044908 Ga0207702_100449084 329
71 3300028800 Ga0265338_10022606 Ga0265338_100226068 329
72 3300028800 Ga0265338_10070327 Ga0265338_100703272 329
73 3300028800 Ga0265338_10168600 Ga0265338_101686002 329
74 3300031235 Ga0265330_10010642 Ga0265330_100106424 329
75 3300031235 Ga0265330_10020329 Ga0265330_100203293 329
76 3300031238 Ga0265332_10000069 Ga0265332_1000006960 329
77 3300031242 Ga0265329_10000669 Ga0265329_1000066912 329
78 3300031249 Ga0265339_10000665 Ga0265339_1000066525 329
79 3300031344 Ga0265316_10000003 Ga0265316_10000003112 329
80 3300031344 Ga0265316_10002678 Ga0265316_1000267811 329
81 3300031344 Ga0265316_10005249 Ga0265316_100052498 329
82 3300031712 Ga0265342_10001716 Ga0265342_1000171623 329
83 3300031728 Ga0316578_10010058 Ga0316578_100100582 329
84 3300031730 Ga0307516_10232616 Ga0307516_102326162 329
85 3300032133 Ga0316583_10001864 Ga0316583_100018646 329
86 3300032133 Ga0316583_10022677 Ga0316583_100226771 329
87 3300035692 Ga0373935_0309848 Ga0373935_0309848_13_1065 329
88 3300035724 Ga0373933_0027771 Ga0373933_0027771_1594_2691 329
89 3300036401 Ga0373937_0324515 Ga0373937_0324515_377_1411 329
90 3300036647 Ga0316582_0005996 Ga0316582_0005996_47_1102 329
91 3300037588 Ga0316581_0003898 Ga0316581_0003898_269_1324 329
92 3300041405 Ga0439438_000087 Ga0439438_000087_30840_31877 329
93 3300041407 Ga0439447_008984 Ga0439447_008984_14_1051 329
94 3300042010 Ga0439452_021598 Ga0439452_021598_281_1318 329
95 3300042127 Ga0450890_000951 Ga0450890_000951_1481_2518 329
96 3300042876 Ga0451577_0000402 Ga0451577_0000402_69761_70819 329
97 3300042876 Ga0451577_0004438 Ga0451577_0004438_4001_4990 329
98 3300042876 Ga0451577_0032671 Ga0451577_0032671_3013_4059 329
99 3300042876 Ga0451577_0036041 Ga0451577_0036041_42_1106 329
100 3300042876 Ga0451577_0041039 Ga0451577_0041039_2916_3980 329
101 3300042876 Ga0451577_0079741 Ga0451577_0079741_1422_2474 329
102 3300042876 Ga0451577_0094850 Ga0451577_0094850_1437_2447 329
103 3300042876 Ga0451577_0404870 Ga0451577_0404870_155_1198 329
104 3300044673 Ga0453683_0000906 Ga0453683_0000906_23496_24590 329
105 3300044673 Ga0453683_0034867 Ga0453683_0034867_1463_2512 329
106 3300044673 Ga0453683_0084616 Ga0453683_0084616_815_1873 329
107 3300044712 Ga0453684_0000019 Ga0453684_0000019_638760_639770 329
108 3300044712 Ga0453684_0000063 Ga0453684_0000063_413723_414790 329
109 3300044712 Ga0453684_0000065 Ga0453684_0000065_69761_70819 329
110 3300044712 Ga0453684_0000114 Ga0453684_0000114_277498_278553 329
111 3300044712 Ga0453684_0000257 Ga0453684_0000257_49937_50974 329
112 3300044712 Ga0453684_0000459 Ga0453684_0000459_68908_69966 329
113 3300044712 Ga0453684_0001174 Ga0453684_0001174_15296_16354 329
114 3300044712 Ga0453684_0001463 Ga0453684_0001463_39593_40675 329
115 3300044712 Ga0453684_0012779 Ga0453684_0012779_11744_12787 329
116 3300044712 Ga0453684_0058132 Ga0453684_0058132_2744_3790 329
117 3300044712 Ga0453684_0068110 Ga0453684_0068110_666_1712 329
118 3300044712 Ga0453684_0093143 Ga0453684_0093143_944_2017 329
119 3300044712 Ga0453684_0093619 Ga0453684_0093619_1710_2762 329
120 3300044712 Ga0453684_0115583 Ga0453684_0115583_73_1206 329
121 3300044712 Ga0453684_0125671 Ga0453684_0125671_712_1767 329
122 3300044712 Ga0453684_0190978 Ga0453684_0190978_908_1942 329
123 3300044712 Ga0453684_0322015 Ga0453684_0322015_595_1641 329
124 3300044712 Ga0453684_0333818 Ga0453684_0333818_436_1539 329
125 3300044712 Ga0453684_0535561 Ga0453684_0535561_46_1083 329
126 3300045051 Ga0451576_0000424 Ga0451576_0000424_27936_28985 329
127 3300045051 Ga0451576_0000714 Ga0451576_0000714_37602_38642 329
128 3300045051 Ga0451576_0001381 Ga0451576_0001381_15353_16411 329
129 3300045051 Ga0451576_0005401 Ga0451576_0005401_13082_14137 329
130 3300045051 Ga0451576_0014505 Ga0451576_0014505_4375_5421 329
131 3300045051 Ga0451576_0020591 Ga0451576_0020591_4257_5312 329
132 3300045051 Ga0451576_0066630 Ga0451576_0066630_203_1243 329
133 3300045051 Ga0451576_0131224 Ga0451576_0131224_62_1099 329
134 3300045051 Ga0451576_0248133 Ga0451576_0248133_620_1684 329
135 3300045051 Ga0451576_0283533 Ga0451576_0283533_141_1193 329
136 3300046517 Ga0495630_0020096 Ga0495630_0020096_3081_4118 329
137 3300047322 Ga0495680_0031056 Ga0495680_0031056_200_1237 329
138 3300047471 Ga0495684_0038851 Ga0495684_0038851_1318_2355 329
139 3300049593 Ga0501077_0053102 Ga0501077_0053102_356_1564 329
140 iso_pu_bacteria 2523231067 2523468938 329
141 iso_pu_bacteria 2526164512 2526211701 329
142 iso_pu_bacteria 2547132512 2548847057 329
143 iso_pu_bacteria 2945961074 2945962071 329
144 iso_pu_bacteria 640427133 640486189 329
145 2162886006 SwRhRL3b_contig_700513 SwRhRL3b_0458.00001770 330
146 2162886006 SwRhRL3b_contig_769416 SwRhRL3b_0578.00001050 330
147 3300005289 Ga0065704_10072621 Ga0065704_100726212 330
148 3300005295 Ga0065707_10001089 Ga0065707_100010891 330
149 3300031251 Ga0265327_10001006 Ga0265327_1000100648 330
150 3300032168 Ga0316593_10029671 Ga0316593_100296712 330
151 3300032168 Ga0316593_10054787 Ga0316593_100547872 330
152 3300033524 Ga0316592_1004348 Ga0316592_10043482 330
153 3300035091 Ga0373951_0001777 Ga0373951_0001777_279_1352 330
154 3300042876 Ga0451577_0000149 Ga0451577_0000149_27258_28259 330
155 3300042876 Ga0451577_0000444 Ga0451577_0000444_66009_67040 330
156 3300042876 Ga0451577_0016647 Ga0451577_0016647_2347_3435 330
157 3300042876 Ga0451577_0031589 Ga0451577_0031589_2988_4073 330
158 3300042876 Ga0451577_0061999 Ga0451577_0061999_2017_3126 330
159 3300044673 Ga0453683_0000301 Ga0453683_0000301_4467_5516 330
160 3300044673 Ga0453683_0009811 Ga0453683_0009811_4986_6209 330
161 3300044673 Ga0453683_0074470 Ga0453683_0074470_95_1210 330
162 3300044673 Ga0453683_0090029 Ga0453683_0090029_431_1504 330
163 3300044673 Ga0453683_0121974 Ga0453683_0121974_503_1588 330
164 3300044673 Ga0453683_0145465 Ga0453683_0145465_157_1266 330
165 3300044712 Ga0453684_0000494 Ga0453684_0000494_126950_127951 330
166 3300044712 Ga0453684_0011237 Ga0453684_0011237_8442_9473 330
167 3300044712 Ga0453684_0011555 Ga0453684_0011555_2528_3592 330
168 3300044712 Ga0453684_0077445 Ga0453684_0077445_1523_2596 330
169 3300044712 Ga0453684_0229437 Ga0453684_0229437_511_1584 330
170 3300044712 Ga0453684_0415175 Ga0453684_0415175_204_1313 330
171 3300045051 Ga0451576_0000869 Ga0451576_0000869_44234_45241 330
172 3300045051 Ga0451576_0002571 Ga0451576_0002571_734_1843 330
173 3300045051 Ga0451576_0007335 Ga0451576_0007335_12089_13138 330
174 3300045051 Ga0451576_0077290 Ga0451576_0077290_2069_3115 330
175 3300045051 Ga0451576_0080373 Ga0451576_0080373_1200_2273 330
176 3300045051 Ga0451576_0123193 Ga0451576_0123193_1361_2440 330
177 3300049824 Ga0501045_0099887 Ga0501045_0099887_521_1630 330
178 3300060353 Ga0501082_0198417 Ga0501082_0198417_81_1190 330
179 iso_pu_bacteria 2523533628 2524001615 330
180 iso_pu_bacteria 2740891818 2740990947 330

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03773

ArsP_1

Predicted permease

70

363

0.98

Structural Annotation

Top 5 Hits

ID Description Score Start End
5l24-assembly1.cif.gz_B structure of cntnw n149l in the intermediate 2 state 0.3549 2 328
5l24-assembly1.cif.gz_B structure of cntnw n149l in the intermediate 2 state 0.3523 2 328
5l2b-assembly1.cif.gz_C structure of cntnw n149s, e332a in an outward-facing state 0.3484 2 328
5l2b-assembly1.cif.gz_C structure of cntnw n149s, e332a in an outward-facing state 0.3464 2 328
4f35-assembly1.cif.gz_C crystal structure of a bacterial dicarboxylate/sodium symporter 0.2999 8 326
ID Description Score Start End Superfamily
af_A6NFC9_18_196_1.20.1070.10 Mainly Alpha;Up-down Bundle;Rhopdopsin 7-helix transmembrane proteins;Rhodopsin 7-helix transmembrane proteins 0.2811 2 190 1.20.1070.10
af_A6NFC9_18_196_1.20.1070.10 Mainly Alpha;Up-down Bundle;Rhopdopsin 7-helix transmembrane proteins;Rhodopsin 7-helix transmembrane proteins 0.271 2 190 1.20.1070.10
af_Q2FZQ5_283_457_1.10.357.20 Mainly Alpha;Orthogonal Bundle;Tetracycline Repressor; domain 2;SLC41 divalent cation transporters, integral membrane domain 0.2609 43 221 1.10.357.20
af_A0A2R8QLY2_345_520_1.20.120.830 Mainly Alpha;Up-down Bundle;Four Helix Bundle (Hemerythrin (Met), subunit A);Serine-rich domain 0.2523 29 226 1.20.120.830
af_Q9UAZ6_8_435_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.2485 32 327 1.20.1250.20
ID Description Score Start End GO Terms
AF-A0A345J8A6-F1-model_v4 deleted 0.9483 15 330
AF-A3CZV9-F1-model_v4 Permease 0.9432 12 328 GO:0005886
AF-A0A7C8FD41-F1-model_v4 Permease 0.9363 15 330 GO:0005886
AF-R5K2Z2-F1-model_v4 deleted 0.9352 15 330
AF-A0A345J8A6-F1-model_v4 deleted 0.9339 15 330

Feature Viewer

pLDDT pTM Quality
81.62 0.79 High
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Predicted Structure (AlphaFold2)

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