F275539

General Info

Members Datasets Scaffolds Average Seq Length
180 119 360 305

Family's Representative Sequence

Representative Sequence 3300009545|Ga0105237_10028945|Ga0105237_100289456
Length 363
Sequence VPRPATFALLRDVRTVADGVLVGREGSAIATSSALSAPTRTPLTTGNIAGRGTNLDPVLRSVLLTASRNRKVRRLIETAPISRDVVRRFVAGTSVDDAVDVTATLASSGLNVSLDHLGEDTTEVGHADATTKAYVTLLARLADHGLANRAEVSVKLSAVGQALDESMARDNAHAICAAAATAGTTVTLDMEDHTTTDSTLSILRELRADFPWVGGVLQAYLHRTEADCRDLASEGSRIRLCKGAYKEPSTVAFQSRADVNKSYVRCLRVLMEGRGYPMVATHDPRLIKVADKLVLDTERAKGSYEFQMLYGIRPHEQQRLADRGDTVRVYVPYGDEWYGYLMRRLAERPANVSFFLRAVATKG

Samples

Sample ID Description Type Environment
1 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
2 3300000549 Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - LJQ_Illumina_Assembled Metagenome Rhizosphere
3 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
6 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
7 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
8 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
9 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
10 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
11 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
12 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
13 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
14 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
15 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
16 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
17 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
18 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
19 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
20 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
21 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
22 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
23 3300012513 Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.2.old.250510 Metagenome Rhizosphere
24 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
25 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
26 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
27 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
28 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
29 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
30 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
31 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
32 3300020081 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
33 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
34 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
35 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
36 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
54 3300028017 Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE4 Metagenome Rhizosphere
55 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
56 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
57 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
58 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
59 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
60 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
61 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
62 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
63 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
64 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
65 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
66 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
67 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
68 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
69 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
70 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
71 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
72 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
73 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
74 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
75 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
76 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
77 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
78 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
79 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
80 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
81 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
82 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
83 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
84 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
85 3300049534 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H4_B_2_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
86 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
87 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
88 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
89 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
90 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
91 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
92 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
93 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
94 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
95 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
96 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
97 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
98 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
99 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
100 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
101 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
102 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
103 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
104 2675903060 Nonomuraea wenchangensis CGMCC 4.5598 Isolate Rhizosphere
105 2738541305 Nocardioides sp. CF167 Isolate Unclassified
106 2751185734 Saccharothrix sp. NRRL B-16314 Isolate Rhizosphere
107 2811994874 Nocardioides sp. SLBN-35 Isolate Unclassified
108 2856741275 Microbispora triticiradicis NEAU-HRDPA2-9 Isolate Unclassified
109 2870721527 Saccharothrix ecbatanensis DSM 45486 Isolate Rhizosphere
110 2873314349 Sphaerisporangium siamense DSM 45784 Isolate Rhizosphere
111 2884693830 Nonomuraea phyllanthi WYY166 Isolate Unclassified
112 2891395885 Microbispora catharanthi CR1-09 Isolate Unclassified
113 2891554331 Microbispora sp. CL1-1 Isolate Unclassified
114 2891562705 Microbispora tritici MT50 Isolate Unclassified
115 2895427314 Nonomuraea sp. PA05 Isolate Unclassified
116 2895442618 Nonomuraea phyllanthi PA1-10 Isolate Unclassified
117 8047710418 Umezawaea endophytica DSM 103496 Isolate Unclassified
118 8055066027 Sphaerisporangium corydalis NEAU-YHS15 Isolate Unclassified
119 8055172936 Sphaerisporangium perillae NEAU-ZS1 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 86.11
Metatranscriptomes 3.33
Isolates 10.56

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.56
Nodule 0
Rhizoplane 1.67
Rhizosphere 86.67
Stem 0
Stem Tuber 0
Unclassified 0.56

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0105237_10028945 3300009545 Bacteria 5635
2 LJQas_1003559 3300000549 Bacteria 2079
3 Ga0070658_10002373 3300005327 Bacteria 15806
4 Ga0070658_10007984 3300005327 Bacteria 8513
5 Ga0070658_10025063 3300005327 Bacteria 4781
6 Ga0070658_10091875 3300005327 Bacteria 2502
7 Ga0070683_100027609 3300005329 Bacteria 5121
8 Ga0070666_10048110 3300005335 Bacteria 2864
9 Ga0070680_100000270 3300005336 Bacteria 34465
10 Ga0070680_100001285 3300005336 Bacteria 18171
11 Ga0070680_100150718 3300005336 Bacteria 1952
12 Ga0070660_100066458 3300005339 Bacteria 2807
13 Ga0070660_100102398 3300005339 Bacteria 2270
14 Ga0070673_100536916 3300005364 Bacteria 1061
15 Ga0070659_100001949 3300005366 Bacteria 14738
16 Ga0070659_100016593 3300005366 Bacteria 5530
17 Ga0070681_10000038 3300005458 Bacteria 94717
18 Ga0070681_10049029 3300005458 Bacteria 4218
19 Ga0070681_10317226 3300005458 Bacteria 1468
20 Ga0070679_100000016 3300005530 Bacteria 139454
21 Ga0070679_100001555 3300005530 Bacteria 20517
22 Ga0070679_100002261 3300005530 Bacteria 17388
23 Ga0070679_100059416 3300005530 Bacteria 3811
24 Ga0070679_100103583 3300005530 Bacteria 2832
25 Ga0070679_100240899 3300005530 Bacteria 1766
26 Ga0070684_100054852 3300005535 Bacteria 3473
27 Ga0070696_100004922 3300005546 Bacteria 8916
28 Ga0068854_100164189 3300005578 Bacteria 1723
29 Ga0068861_100152358 3300005719 Bacteria 1898
30 Ga0081539_10006522 3300005985 Bacteria 11144
31 Ga0075364_10003337 3300006051 Bacteria 9111
32 Ga0075433_10185223 3300006852 Bacteria 1852
33 Ga0105245_10041220 3300009098 Bacteria 4116
34 Ga0105245_10089383 3300009098 Bacteria 2831
35 Ga0114129_10046964 3300009147 Bacteria 6068
36 Ga0105249_10729515 3300009553 Bacteria 1052
37 Ga0105239_10539931 3300010375 Bacteria 1327
38 Ga0157326_1002457 3300012513 Bacteria 1984
39 Ga0157371_10027470 3300013102 Bacteria 4128
40 Ga0157370_10232006 3300013104 Bacteria 1708
41 Ga0157369_10001452 3300013105 Bacteria 29085
42 Ga0157369_10058211 3300013105 Bacteria 4168
43 Ga0157369_10107628 3300013105 Bacteria 2966
44 Ga0157369_10149950 3300013105 Bacteria 2464
45 Ga0157372_10026987 3300013307 Bacteria 6252
46 Ga0157372_10234099 3300013307 Bacteria 2130
47 Ga0157372_10680961 3300013307 Bacteria 1197
48 Ga0157375_10567587 3300013308 Bacteria 1296
49 Ga0163163_10694314 3300014325 Bacteria 1081
50 Ga0157379_10642170 3300014968 Bacteria 993
51 Ga0206356_11192608 3300020070 Bacteria 2840
52 Ga0206354_11367974 3300020081 Bacteria 4212
53 Ga0206353_10517753 3300020082 Bacteria 3050
54 Ga0206353_10905794 3300020082 Bacteria 15261
55 Ga0206353_11138860 3300020082 Bacteria 2398
56 Ga0213872_10021444 3300021361 Unclassified 2975
57 Ga0213875_10001592 3300021388 Bacteria 14399
58 Ga0207705_10002013 3300025909 Bacteria 15813
59 Ga0207705_10002435 3300025909 Bacteria 14353
60 Ga0207705_10040892 3300025909 Bacteria 3326
61 Ga0207705_10060010 3300025909 Bacteria 2746
62 Ga0207705_10091811 3300025909 Bacteria 2224
63 Ga0207707_10000085 3300025912 Bacteria 94740
64 Ga0207707_10001441 3300025912 Bacteria 22018
65 Ga0207707_10253317 3300025912 Bacteria 1529
66 Ga0207671_10074202 3300025914 Bacteria 2542
67 Ga0207660_10000095 3300025917 Bacteria 48615
68 Ga0207660_10000235 3300025917 Bacteria 35795
69 Ga0207657_10146571 3300025919 Bacteria 1925
70 Ga0207657_10219922 3300025919 Bacteria 1522
71 Ga0207652_10000015 3300025921 Bacteria 193042
72 Ga0207652_10000235 3300025921 Bacteria 58046
73 Ga0207652_10143547 3300025921 Bacteria 2135
74 Ga0207652_10216952 3300025921 Bacteria 1723
75 Ga0207652_10226025 3300025921 Bacteria 1687
76 Ga0207652_10499414 3300025921 Bacteria 1095
77 Ga0207687_10154898 3300025927 Bacteria 1752
78 Ga0207687_10414172 3300025927 Bacteria 1111
79 Ga0207690_10000880 3300025932 Bacteria 19170
80 Ga0207690_10018350 3300025932 Bacteria 4290
81 Ga0207686_10077203 3300025934 Bacteria 2162
82 Ga0207689_10366936 3300025942 Bacteria 1198
83 Ga0207661_10142615 3300025944 Bacteria 2063
84 Ga0207661_10428251 3300025944 Bacteria 1203
85 Ga0207712_10141428 3300025961 Bacteria 1847
86 Ga0207678_10249017 3300026067 Bacteria 1522
87 Ga0207702_10377571 3300026078 Bacteria 1362
88 Ga0207641_10246150 3300026088 Bacteria 1668
89 Ga0207674_10203818 3300026116 Bacteria 1927
90 Ga0207698_10167403 3300026142 Bacteria 1931
91 Ga0207428_10306448 3300027907 Bacteria 1175
92 Ga0265356_1000064 3300028017 Bacteria 17470
93 Ga0265325_10019319 3300031241 Bacteria 3768
94 Ga0307407_10002386 3300031903 Bacteria 7333
95 Ga0307407_10042623 3300031903 Bacteria 2546
96 Ga0307416_100090053 3300032002 Bacteria 2629
97 Ga0307414_10264553 3300032004 Bacteria 1437
98 Ga0307507_10022089 3300033179 Bacteria 7050
99 Ga0395899_0001716 3300037312 Bacteria 18224
100 Ga0395899_0168641 3300037312 Bacteria 1543
101 Ga0395900_0018990 3300037418 Bacteria 7012
102 Ga0395898_0222080 3300037466 Bacteria 1802
103 Ga0436364_0273345 3300037853 Bacteria 2794207
104 Ga0436364_1296475 3300037853 Bacteria 45742
105 Ga0395901_0015619 3300038443 Bacteria 7735
106 Ga0436365_0119847 3300039437 Bacteria 3739
107 Ga0436363_0402996 3300039450 Bacteria 3101
108 Ga0439449_0082852 3300042007 Bacteria 1183
109 Ga0466969_0018445 3300044656 Bacteria 3634
110 Ga0466965_0026568 3300044683 Bacteria 2807
111 Ga0466965_0032303 3300044683 Bacteria 2556
112 Ga0466966_0001340 3300044684 Bacteria 15824
113 Ga0466966_0009064 3300044684 Bacteria 6592
114 Ga0466961_0001594 3300044693 Bacteria 14058
115 Ga0466961_0007500 3300044693 Bacteria 6940
116 Ga0466961_0011331 3300044693 Bacteria 5701
117 Ga0466961_0012017 3300044693 Bacteria 5533
118 Ga0466961_0028117 3300044693 Bacteria 3616
119 Ga0466963_0000115 3300044694 Bacteria 29685
120 Ga0466964_0046975 3300044706 Bacteria 1761
121 Ga0466971_0003016 3300044719 Bacteria 7155
122 Ga0466971_0061694 3300044719 Bacteria 1696
123 Ga0466970_0072312 3300044765 Bacteria 1855
124 Ga0466970_0084723 3300044765 Bacteria 1716
125 Ga0466957_0003879 3300044842 Bacteria 8262
126 Ga0466957_0006909 3300044842 Bacteria 6415
127 Ga0466959_0004468 3300045049 Bacteria 9366
128 Ga0466959_0040643 3300045049 Bacteria 3435
129 Ga0466959_0079049 3300045049 Bacteria 2372
130 Ga0466958_0000365 3300045836 Bacteria 18284
131 Ga0466958_0000458 3300045836 Bacteria 17006
132 Ga0466967_0227261 3300045976 Bacteria 1776
133 Ga0466967_0467144 3300045976 Bacteria 1235
134 Ga0495653_0108331 3300046463 Bacteria 2001
135 Ga0495669_0008388 3300046684 Bacteria 4344
136 Ga0496108_0094288 3300048911 Bacteria 2548
137 Ga0496108_0185746 3300048911 Bacteria 1801
138 Ga0496109_0191356 3300048912 Bacteria 1923
139 Ga0496119_0136308 3300048922 Bacteria 1331
140 Ga0501318_014659 3300049534 Bacteria 927
141 Ga0501031_0014723 3300049568 Bacteria 5083
142 Ga0501037_0122482 3300049573 Bacteria 1869
143 Ga0501038_0011100 3300049574 Bacteria 8225
144 Ga0501042_0062986 3300049578 Bacteria 2650
145 Ga0501048_0020086 3300049582 Bacteria 4900
146 Ga0501069_0032458 3300049585 Bacteria 2874
147 Ga0501070_0044507 3300049586 Bacteria 3693
148 Ga0501071_0027596 3300049587 Bacteria 3995
149 Ga0501072_0064304 3300049588 Bacteria 2893
150 Ga0501074_0071747 3300049590 Bacteria 2489
151 Ga0501076_0025265 3300049592 Bacteria 4596
152 Ga0501077_0013268 3300049593 Bacteria 5165
153 Ga0501080_0030764 3300049742 Bacteria 5002
154 Ga0501080_0270005 3300049742 Bacteria 1548
155 Ga0501081_0150868 3300049743 Bacteria 1669
156 Ga0501045_0036732 3300049824 Bacteria 3558
157 Ga0501084_0068653 3300054114 Bacteria 2967
158 Ga0501082_0290379 3300060353 Bacteria 1424
159 Ga0466962_0004254 3300061719 Bacteria 6861
160 Ga0466962_0014319 3300061719 Bacteria 3822
161 Ga0466962_0127467 3300061719 Bacteria 1229
162 2676487718 2675903060 Bacteria 10051191
163 2738867738 2738541305 Bacteria 4910150
164 2753069775 2751185734 Bacteria 8863695
165 2753071490 2751185734 Bacteria 8863695
166 2812332005 2811994874 Bacteria 5367947
167 2856743823 2856741275 Bacteria 8096094
168 2870727713 2870721527 Bacteria 9689237
169 2870729533 2870721527 Bacteria 9689237
170 2873320606 2873314349 Bacteria 8512634
171 2884697756 2884693830 Bacteria 11273186
172 2891402831 2891395885 Bacteria 9251614
173 2891560305 2891554331 Bacteria 8812224
174 2891564740 2891562705 Bacteria 8039471
175 2895431847 2895427314 Bacteria 13147766
176 2895444857 2895442618 Bacteria 11027144
177 8047711368 8047710418 Bacteria 11023148
178 8047718459 8047710418 Bacteria 11023148
179 8055072393 8055066027 Bacteria 9479577
180 8055178520 8055172936 Bacteria 9305943
181 Ga0105237_10028945
182 LJQas_1003559
183 Ga0070658_10002373
184 Ga0070658_10007984
185 Ga0070658_10025063
186 Ga0070658_10091875
187 Ga0070683_100027609
188 Ga0070666_10048110
189 Ga0070680_100000270
190 Ga0070680_100001285
191 Ga0070680_100150718
192 Ga0070660_100066458
193 Ga0070660_100102398
194 Ga0070673_100536916
195 Ga0070659_100001949
196 Ga0070659_100016593
197 Ga0070681_10000038
198 Ga0070681_10049029
199 Ga0070681_10317226
200 Ga0070679_100000016
201 Ga0070679_100001555
202 Ga0070679_100002261
203 Ga0070679_100059416
204 Ga0070679_100103583
205 Ga0070679_100240899
206 Ga0070684_100054852
207 Ga0070696_100004922
208 Ga0068854_100164189
209 Ga0068861_100152358
210 Ga0081539_10006522
211 Ga0075364_10003337
212 Ga0075433_10185223
213 Ga0105245_10041220
214 Ga0105245_10089383
215 Ga0114129_10046964
216 Ga0105249_10729515
217 Ga0105239_10539931
218 Ga0157326_1002457
219 Ga0157371_10027470
220 Ga0157370_10232006
221 Ga0157369_10001452
222 Ga0157369_10058211
223 Ga0157369_10107628
224 Ga0157369_10149950
225 Ga0157372_10026987
226 Ga0157372_10234099
227 Ga0157372_10680961
228 Ga0157375_10567587
229 Ga0163163_10694314
230 Ga0157379_10642170
231 Ga0206356_11192608
232 Ga0206354_11367974
233 Ga0206353_10517753
234 Ga0206353_10905794
235 Ga0206353_11138860
236 Ga0213872_10021444
237 Ga0213875_10001592
238 Ga0207705_10002013
239 Ga0207705_10002435
240 Ga0207705_10040892
241 Ga0207705_10060010
242 Ga0207705_10091811
243 Ga0207707_10000085
244 Ga0207707_10001441
245 Ga0207707_10253317
246 Ga0207671_10074202
247 Ga0207660_10000095
248 Ga0207660_10000235
249 Ga0207657_10146571
250 Ga0207657_10219922
251 Ga0207652_10000015
252 Ga0207652_10000235
253 Ga0207652_10143547
254 Ga0207652_10216952
255 Ga0207652_10226025
256 Ga0207652_10499414
257 Ga0207687_10154898
258 Ga0207687_10414172
259 Ga0207690_10000880
260 Ga0207690_10018350
261 Ga0207686_10077203
262 Ga0207689_10366936
263 Ga0207661_10142615
264 Ga0207661_10428251
265 Ga0207712_10141428
266 Ga0207678_10249017
267 Ga0207702_10377571
268 Ga0207641_10246150
269 Ga0207674_10203818
270 Ga0207698_10167403
271 Ga0207428_10306448
272 Ga0265356_1000064
273 Ga0265325_10019319
274 Ga0307407_10002386
275 Ga0307407_10042623
276 Ga0307416_100090053
277 Ga0307414_10264553
278 Ga0307507_10022089
279 Ga0395899_0001716
280 Ga0395899_0168641
281 Ga0395900_0018990
282 Ga0395898_0222080
283 Ga0436364_0273345
284 Ga0436364_1296475
285 Ga0395901_0015619
286 Ga0436365_0119847
287 Ga0436363_0402996
288 Ga0439449_0082852
289 Ga0466969_0018445
290 Ga0466965_0026568
291 Ga0466965_0032303
292 Ga0466966_0001340
293 Ga0466966_0009064
294 Ga0466961_0001594
295 Ga0466961_0007500
296 Ga0466961_0011331
297 Ga0466961_0012017
298 Ga0466961_0028117
299 Ga0466963_0000115
300 Ga0466964_0046975
301 Ga0466971_0003016
302 Ga0466971_0061694
303 Ga0466970_0072312
304 Ga0466970_0084723
305 Ga0466957_0003879
306 Ga0466957_0006909
307 Ga0466959_0004468
308 Ga0466959_0040643
309 Ga0466959_0079049
310 Ga0466958_0000365
311 Ga0466958_0000458
312 Ga0466967_0227261
313 Ga0466967_0467144
314 Ga0495653_0108331
315 Ga0495669_0008388
316 Ga0496108_0094288
317 Ga0496108_0185746
318 Ga0496109_0191356
319 Ga0496119_0136308
320 Ga0501318_014659
321 Ga0501031_0014723
322 Ga0501037_0122482
323 Ga0501038_0011100
324 Ga0501042_0062986
325 Ga0501048_0020086
326 Ga0501069_0032458
327 Ga0501070_0044507
328 Ga0501071_0027596
329 Ga0501072_0064304
330 Ga0501074_0071747
331 Ga0501076_0025265
332 Ga0501077_0013268
333 Ga0501080_0030764
334 Ga0501080_0270005
335 Ga0501081_0150868
336 Ga0501045_0036732
337 Ga0501084_0068653
338 Ga0501082_0290379
339 Ga0466962_0004254
340 Ga0466962_0014319
341 Ga0466962_0127467
342 2676487718
343 2738867738
344 2753069775
345 2753071490
346 2812332005
347 2856743823
348 2870727713
349 2870729533
350 2873320606
351 2884697756
352 2891402831
353 2891560305
354 2891564740
355 2895431847
356 2895444857
357 8047711368
358 8047718459
359 8055072393
360 8055178520

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01619

Pro_dh

Proline dehydrogenase

98

357

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
4h6r-assembly1.cif.gz_A structure of reduced deinococcus radiodurans proline dehydrogenase 0.9345 29 300
2ekg-assembly1.cif.gz_B structure of thermus thermophilus proline dehydrogenase inactivated by n-propargylglycine 0.933 5 299
5m42-assembly1.cif.gz_A structure of thermus thermophilus l-proline dehydrogenase lacking alpha helices a, b and c 0.9273 38 285
4h6r-assembly1.cif.gz_A structure of reduced deinococcus radiodurans proline dehydrogenase 0.9211 29 300
5m42-assembly1.cif.gz_A structure of thermus thermophilus l-proline dehydrogenase lacking alpha helices a, b and c 0.9199 38 285
ID Description Score Start End Superfamily
af_O50444_27_319_3.20.20.220 Alpha Beta;Alpha-Beta Barrel;TIM Barrel; 0.9491 25 310 3.20.20.220
af_Q2FXG3_20_304_3.20.20.220 Alpha Beta;Alpha-Beta Barrel;TIM Barrel; 0.9455 32 311 3.20.20.220
2ekgB02 Alpha Beta;Alpha-Beta Barrel;TIM Barrel; 0.941 37 285 3.20.20.220
4h6rA00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel; 0.9345 29 300 3.20.20.220
2ekgB02 Alpha Beta;Alpha-Beta Barrel;TIM Barrel; 0.9335 37 285 3.20.20.220
ID Description Score Start End GO Terms
AF-A0A6M0KVY9-F1-model_v4 deleted 0.9962 146 235
AF-A0A7Y5XIM6-F1-model_v4 deleted 0.9859 32 314
AF-A0A1M4TYA3-F1-model_v4 proline dehydrogenase (EC 1.5.5.2) 0.9845 1 314 GO:0000166
GO:0004657
GO:0010133
AF-A0A6G3XBN5-F1-model_v4 Proline dehydrogenase 0.9839 155 261 GO:0004657
GO:0006562
AF-A0A0M8T2S7-F1-model_v4 proline dehydrogenase (EC 1.5.5.2) 0.9828 18 314 GO:0000166
GO:0004657
GO:0010133

Map