F275414

General Info

Members Datasets Scaffolds Average Seq Length
180 145 180 325

Family's Representative Sequence

Representative Sequence 3300006871|Ga0075434_100064988|Ga0075434_1000649884
Length 373
Sequence VGALAGEPRLLDRLRLALRARHYSLRTEEAYVAWARRFVIFHGKRHPMTMGEPEINAFASDLAIRQGVSASTQNQALAAILFLYRYVLEKPLPQVAGVVRAKRPRRLPSVLTRAEVRAVISRLGGAQRLVALLLYGSGLRLLECLRLRVKDVEFGSNRIVVRDAKGQRDRIAPLPLLVKAALPSWLARVKRVHERDLADGFGSVFLPDALARKYPGSEKDWGWQWIFPAGHRSRDPRIGAERRHHLDESVIQRAVRQAVTDMGISRRASCHTFRHSFATHLIEDGYDIRTIQELLGHKDVKTTMIYTHVLNRPGTLGVRSPADVLWRPSLTGSVSTRRLSSQPNSWRGPLPPERQLEAGIMDPEHPGDEDDDF

Samples

Sample ID Description Type Environment
1 3300002774 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA Metagenome Endosphere
2 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
3 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
4 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
5 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
6 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
7 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
8 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
9 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
10 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
11 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
12 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
13 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
14 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
15 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
16 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
17 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
18 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
19 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
20 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
21 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
22 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
23 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
24 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
25 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
26 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
27 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
28 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
29 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
30 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
31 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
32 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
33 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
34 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
35 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
36 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
37 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
38 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
39 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
40 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
41 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
42 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
43 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
44 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
45 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
46 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
47 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
48 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
49 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
50 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
51 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
52 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
53 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
54 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
55 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
56 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
57 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
58 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
59 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
60 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
61 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
62 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
63 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
64 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
65 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
66 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
67 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
68 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
88 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
91 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
92 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
93 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
94 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
95 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
96 3300034820 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_2 Metagenome Rhizosphere
97 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
98 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
99 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
100 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
101 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
102 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
103 3300037588 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA Metagenome Rhizosphere
104 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
105 3300042530 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0530L_E14_082316_2047 Metagenome Rhizosphere
106 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
107 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
108 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
109 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
110 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
111 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
112 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
113 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
114 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
115 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
116 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
117 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
118 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
119 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
120 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
121 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
122 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
123 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
124 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
125 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
126 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
127 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
128 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
129 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
130 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
131 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
132 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
133 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
134 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
135 3300049853 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F4_A_2_drought Metagenome Rhizosphere
136 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
137 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
138 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
139 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
140 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
141 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
142 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
143 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
144 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
145 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 6.67
Nodule 0
Rhizoplane 0
Rhizosphere 92.22
Stem 0
Stem Tuber 0
Unclassified 1.11

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25150J39212_1001220 3300002774 Bacteria 7557
2 JGI25153J46596_10017194 3300003215 Bacteria 2859
3 Ga0055524_1001681 3300003775 Bacteria 12314
4 Ga0065715_10143837 3300005293 Bacteria 1815
5 Ga0065707_10017360 3300005295 Bacteria 1784
6 Ga0070676_10078442 3300005328 Bacteria 1998
7 Ga0070690_100210222 3300005330 Bacteria 1358
8 Ga0070670_100184556 3300005331 Bacteria 1811
9 Ga0070677_10002488 3300005333 Bacteria 5894
10 Ga0070691_10139496 3300005341 Bacteria 1234
11 Ga0070671_100272462 3300005355 Bacteria 1439
12 Ga0070674_100018648 3300005356 Bacteria 4392
13 Ga0070673_100040845 3300005364 Bacteria 3561
14 Ga0070673_100292097 3300005364 Bacteria 1433
15 Ga0070709_10081137 3300005434 Unclassified 2116
16 Ga0070701_10156544 3300005438 Unclassified 1316
17 Ga0070711_100000212 3300005439 Bacteria 30680
18 Ga0070708_100182151 3300005445 Bacteria 1964
19 Ga0070708_100254457 3300005445 Bacteria 1650
20 Ga0070663_100301860 3300005455 Bacteria 1282
21 Ga0070678_100051503 3300005456 Bacteria 2985
22 Ga0070681_10001038 3300005458 Bacteria 23577
23 Ga0070681_10126232 3300005458 Bacteria 2491
24 Ga0068867_100334596 3300005459 Bacteria 1259
25 Ga0070685_10020400 3300005466 Bacteria 3585
26 Ga0070706_100307561 3300005467 Bacteria 1479
27 Ga0070707_100352889 3300005468 Bacteria 1428
28 Ga0070697_100128644 3300005536 Bacteria 2122
29 Ga0070697_100293956 3300005536 Unclassified 1396
30 Ga0070672_100016568 3300005543 Bacteria 5279
31 Ga0070695_100095189 3300005545 Bacteria 1995
32 Ga0070665_100203131 3300005548 Bacteria 1982
33 Ga0068859_100366641 3300005617 Bacteria 1536
34 Ga0068859_100613162 3300005617 Bacteria 1181
35 Ga0068864_100127428 3300005618 Bacteria 2283
36 Ga0068864_100358328 3300005618 Bacteria 1378
37 Ga0068861_100159554 3300005719 Unclassified 1859
38 Ga0068861_100176663 3300005719 Bacteria 1774
39 Ga0068870_10020343 3300005840 Bacteria 3231
40 Ga0068858_100047575 3300005842 Bacteria 3976
41 Ga0068862_100104322 3300005844 Unclassified 2483
42 Ga0081455_10095428 3300005937 Bacteria 2400
43 Ga0081539_10000022 3300005985 Bacteria 356710
44 Ga0081539_10001415 3300005985 Bacteria 41285
45 Ga0070717_10000280 3300006028 Bacteria 34771
46 Ga0097621_100208973 3300006237 Bacteria 1697
47 Ga0068871_100045500 3300006358 Bacteria 3532
48 Ga0068871_100221089 3300006358 Bacteria 1641
49 Ga0075428_100197484 3300006844 Bacteria 2176
50 Ga0075428_100368162 3300006844 Bacteria 1541
51 Ga0075430_100341493 3300006846 Bacteria 1237
52 Ga0075434_100064988 3300006871 Bacteria 3633
53 Ga0075429_100217943 3300006880 Bacteria 1672
54 Ga0075429_100378399 3300006880 Bacteria 1239
55 Ga0068865_100103850 3300006881 Bacteria 2085
56 Ga0068865_100174035 3300006881 Bacteria 1652
57 Ga0075436_100069213 3300006914 Bacteria 2438
58 Ga0097620_100366672 3300006931 Bacteria 1536
59 Ga0097620_100404906 3300006931 Bacteria 1460
60 Ga0097620_100613165 3300006931 Bacteria 1181
61 Ga0105240_10141933 3300009093 Bacteria 2870
62 Ga0111539_10326412 3300009094 Bacteria 1786
63 Ga0105245_10111488 3300009098 Bacteria 2544
64 Ga0114129_10174392 3300009147 Bacteria 2929
65 Ga0105242_10473623 3300009176 Bacteria 1185
66 Ga0105248_10146186 3300009177 Bacteria 2668
67 Ga0105238_10361177 3300009551 Bacteria 1442
68 Ga0105246_10246303 3300011119 Bacteria 1416
69 Ga0157378_10113845 3300013297 Bacteria 2484
70 Ga0163162_10063313 3300013306 Bacteria 3740
71 Ga0163162_10394760 3300013306 Bacteria 1516
72 Ga0157375_10314085 3300013308 Bacteria 1731
73 Ga0163163_10007424 3300014325 Bacteria 9675
74 Ga0163163_10213992 3300014325 Bacteria 1976
75 Ga0157380_10089296 3300014326 Bacteria 2538
76 Ga0157379_10247718 3300014968 Bacteria 1617
77 Ga0157376_10176419 3300014969 Bacteria 1950
78 Ga0163161_10252952 3300017792 Bacteria 1374
79 Ga0207425_1004341 3300025245 Bacteria 4286
80 Ga0209565_1001894 3300025263 Bacteria 8280
81 Ga0209565_1010325 3300025263 Bacteria 2318
82 Ga0209675_1012120 3300025291 Bacteria 2801
83 Ga0209564_1017309 3300025295 Bacteria 2817
84 Ga0209564_1020302 3300025295 Bacteria 2438
85 Ga0209256_1002317 3300025299 Bacteria 15940
86 Ga0209256_1024459 3300025299 Bacteria 1778
87 Ga0207682_10004067 3300025893 Bacteria 6213
88 Ga0207642_10135464 3300025899 Bacteria 1291
89 Ga0207643_10019133 3300025908 Bacteria 3752
90 Ga0207684_10195656 3300025910 Bacteria 1744
91 Ga0207646_10026528 3300025922 Bacteria 5286
92 Ga0207659_10052793 3300025926 Bacteria 2897
93 Ga0207687_10154242 3300025927 Bacteria 1756
94 Ga0207700_10015583 3300025928 Bacteria 5019
95 Ga0207644_10261977 3300025931 Bacteria 1383
96 Ga0207669_10056125 3300025937 Bacteria 2389
97 Ga0207704_10094222 3300025938 Bacteria 1976
98 Ga0207704_10268641 3300025938 Bacteria 1290
99 Ga0207691_10013155 3300025940 Bacteria 7923
100 Ga0207691_10185010 3300025940 Bacteria 1819
101 Ga0207667_10103379 3300025949 Bacteria 2938
102 Ga0207651_10023790 3300025960 Bacteria 3776
103 Ga0207702_10257525 3300026078 Bacteria 1641
104 Ga0207641_10354281 3300026088 Bacteria 1399
105 Ga0207676_10231314 3300026095 Bacteria 1653
106 Ga0207675_100316933 3300026118 Bacteria 1522
107 Ga0207683_10185514 3300026121 Bacteria 1887
108 Ga0207428_10002041 3300027907 Bacteria 20405
109 Ga0207428_10045216 3300027907 Bacteria 3548
110 Ga0268266_10121928 3300028379 Bacteria 2321
111 Ga0268265_10070858 3300028380 Unclassified 2712
112 Ga0265323_10008315 3300028653 Bacteria 4284
113 Ga0307513_10201287 3300031456 Bacteria 1832
114 Ga0307408_100114097 3300031548 Bacteria 2081
115 Ga0316578_10006408 3300031728 Bacteria 5806
116 Ga0307414_10251340 3300032004 Bacteria 1470
117 Ga0316585_10045722 3300032137 Bacteria 1401
118 Ga0373959_0000065 3300034820 Bacteria 23930
119 Ga0373934_0015662 3300035086 Bacteria 2878
120 Ga0373955_0006383 3300035172 Bacteria 5374
121 Ga0373924_0063086 3300035410 Bacteria 1553
122 Ga0373933_0028637 3300035724 Bacteria 3215
123 Ga0373937_0037998 3300036401 Bacteria 4388
124 Ga0316584_0099524 3300036712 Bacteria 2177
125 Ga0316584_0149219 3300036712 Bacteria 1741
126 Ga0316581_0055525 3300037588 Bacteria 1214
127 Ga0400483_078720 3300039062 Unclassified 1161
128 Ga0450916_004117 3300042530 Bacteria 1627
129 Ga0451577_0043861 3300042876 Bacteria 4004
130 Ga0451577_0075435 3300042876 Bacteria 3007
131 Ga0451577_0311776 3300042876 Bacteria 1426
132 Ga0453684_0004053 3300044712 Bacteria 31845
133 Ga0453684_0098550 3300044712 Bacteria 3583
134 Ga0453684_0186724 3300044712 Bacteria 2428
135 Ga0453684_0431592 3300044712 Bacteria 1470
136 Ga0451576_0007164 3300045051 Bacteria 13441
137 Ga0451576_0049819 3300045051 Bacteria 4395
138 Ga0451576_0194323 3300045051 Bacteria 2119
139 Ga0495651_0071356 3300046462 Bacteria 2640
140 Ga0495653_0002241 3300046463 Bacteria 15293
141 Ga0495580_0021365 3300046472 Bacteria 4776
142 Ga0495639_0156786 3300046475 Bacteria 1100
143 Ga0495664_0022296 3300046477 Bacteria 3669
144 Ga0495608_0145903 3300046511 Bacteria 1509
145 Ga0495628_0090408 3300046516 Bacteria 2370
146 Ga0495652_0006139 3300046529 Bacteria 11226
147 Ga0495665_0072350 3300046531 Bacteria 1816
148 Ga0495587_0022399 3300046536 Bacteria 3890
149 Ga0495645_0000818 3300046543 Bacteria 21283
150 Ga0495667_0062530 3300046559 Bacteria 2439
151 Ga0495667_0249878 3300046559 Bacteria 1129
152 Ga0495657_0224991 3300046675 Bacteria 1136
153 Ga0495599_0001634 3300046678 Bacteria 12929
154 Ga0495623_0055527 3300046679 Bacteria 2496
155 Ga0495646_0073370 3300046680 Bacteria 2010
156 Ga0495613_0029105 3300046689 Bacteria 4108
157 Ga0495604_0014103 3300047317 Bacteria 6371
158 Ga0495674_0122912 3300047319 Bacteria 2192
159 Ga0495675_0049122 3300047444 Bacteria 2682
160 Ga0495675_0096247 3300047444 Bacteria 1856
161 Ga0495684_0010298 3300047471 Bacteria 7232
162 Ga0495684_0013000 3300047471 Bacteria 6424
163 Ga0495602_0049418 3300048088 Bacteria 3767
164 Ga0501077_0115345 3300049593 Unclassified 1703
165 Ga0501080_0018301 3300049742 Bacteria 6484
166 Ga0501081_0072141 3300049743 Unclassified 2408
167 Ga0501045_0169374 3300049824 Bacteria 1627
168 Ga0501226_000028 3300049853 Bacteria 88553
169 nmdc:mga05p37_191947_c1 3300050507 Bacteria 2479
170 nmdc:mga09592_174172_c1 3300050508 Bacteria 1861
171 nmdc:mga0qj67_329272_c1 3300050509 Bacteria 1236
172 nmdc:mga06r32_119195_c1 3300050510 Bacteria 2602
173 nmdc:mga08y16_182043_c1 3300050511 Bacteria 2182
174 nmdc:mga08y16_211502_c1 3300050511 Bacteria 2009
175 nmdc:mga0n895_205364_c1 3300050512 Bacteria 2001
176 nmdc:mga0n895_334640_c1 3300050512 Bacteria 1534
177 nmdc:mga0a205_656_c1 3300050515 Bacteria 27554
178 Ga0495601_0066582 3300053077 Bacteria 2293
179 Ga0500568_0013199 3300053139 Bacteria 3771
180 Ga0501082_0369869 3300060353 Bacteria 1250

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300005937 Ga0081455_10095428 Ga0081455_100954284 290
2 3300042876 Ga0451577_0043861 Ga0451577_0043861_290_1228 299
3 3300044712 Ga0453684_0004053 Ga0453684_0004053_315_1253 299
4 3300005439 Ga0070711_100000212 Ga0070711_1000002127 301
5 3300005536 Ga0070697_100293956 Ga0070697_1002939561 302
6 3300036712 Ga0316584_0149219 Ga0316584_0149219_819_1730 303
7 3300050512 nmdc:mga0n895_205364_c1 nmdc:mga0n895_205364_c1_521_1438 304
8 3300053139 Ga0500568_0013199 Ga0500568_0013199_797_1723 306
9 3300005330 Ga0070690_100210222 Ga0070690_1002102222 311
10 3300006358 Ga0068871_100045500 Ga0068871_1000455004 311
11 3300009098 Ga0105245_10111488 Ga0105245_101114883 311
12 3300013297 Ga0157378_10113845 Ga0157378_101138454 311
13 3300013306 Ga0163162_10063313 Ga0163162_100633133 311
14 3300014968 Ga0157379_10247718 Ga0157379_102477183 311
15 3300025927 Ga0207687_10154242 Ga0207687_101542423 311
16 3300046475 Ga0495639_0156786 Ga0495639_0156786_120_1061 312
17 3300046559 Ga0495667_0249878 Ga0495667_0249878_28_969 312
18 3300025295 Ga0209564_1017309 Ga0209564_10173094 315
19 3300047444 Ga0495675_0096247 Ga0495675_0096247_682_1632 315
20 3300005985 Ga0081539_10000022 Ga0081539_1000002220 317
21 3300006914 Ga0075436_100069213 Ga0075436_1000692131 317
22 3300005328 Ga0070676_10078442 Ga0070676_100784422 318
23 3300005331 Ga0070670_100184556 Ga0070670_1001845562 318
24 3300005333 Ga0070677_10002488 Ga0070677_100024886 318
25 3300005356 Ga0070674_100018648 Ga0070674_1000186485 318
26 3300005364 Ga0070673_100040845 Ga0070673_1000408454 318
27 3300005455 Ga0070663_100301860 Ga0070663_1003018601 318
28 3300005456 Ga0070678_100051503 Ga0070678_1000515034 318
29 3300005459 Ga0068867_100334596 Ga0068867_1003345962 318
30 3300005466 Ga0070685_10020400 Ga0070685_100204004 318
31 3300005543 Ga0070672_100016568 Ga0070672_1000165686 318
32 3300005548 Ga0070665_100203131 Ga0070665_1002031312 318
33 3300005618 Ga0068864_100127428 Ga0068864_1001274283 318
34 3300005719 Ga0068861_100176663 Ga0068861_1001766632 318
35 3300005840 Ga0068870_10020343 Ga0068870_100203434 318
36 3300006237 Ga0097621_100208973 Ga0097621_1002089732 318
37 3300006358 Ga0068871_100221089 Ga0068871_1002210892 318
38 3300006881 Ga0068865_100174035 Ga0068865_1001740352 318
39 3300009176 Ga0105242_10473623 Ga0105242_104736231 318
40 3300013306 Ga0163162_10394760 Ga0163162_103947602 318
41 3300013308 Ga0157375_10314085 Ga0157375_103140852 318
42 3300014325 Ga0163163_10213992 Ga0163163_102139921 318
43 3300014326 Ga0157380_10089296 Ga0157380_100892963 318
44 3300014969 Ga0157376_10176419 Ga0157376_101764192 318
45 3300017792 Ga0163161_10252952 Ga0163161_102529522 318
46 3300025893 Ga0207682_10004067 Ga0207682_100040676 318
47 3300025899 Ga0207642_10135464 Ga0207642_101354641 318
48 3300025908 Ga0207643_10019133 Ga0207643_100191334 318
49 3300025926 Ga0207659_10052793 Ga0207659_100527934 318
50 3300025937 Ga0207669_10056125 Ga0207669_100561251 318
51 3300025938 Ga0207704_10268641 Ga0207704_102686412 318
52 3300025940 Ga0207691_10013155 Ga0207691_100131551 318
53 3300025960 Ga0207651_10023790 Ga0207651_100237904 318
54 3300026088 Ga0207641_10354281 Ga0207641_103542812 318
55 3300026118 Ga0207675_100316933 Ga0207675_1003169332 318
56 3300026121 Ga0207683_10185514 Ga0207683_101855142 318
57 3300028379 Ga0268266_10121928 Ga0268266_101219283 318
58 3300039062 Ga0400483_078720 Ga0400483_078720_46_1017 318
59 3300005295 Ga0065707_10017360 Ga0065707_100173602 319
60 3300005341 Ga0070691_10139496 Ga0070691_101394961 319
61 3300005355 Ga0070671_100272462 Ga0070671_1002724622 319
62 3300005364 Ga0070673_100292097 Ga0070673_1002920972 319
63 3300005719 Ga0068861_100159554 Ga0068861_1001595541 319
64 3300005844 Ga0068862_100104322 Ga0068862_1001043223 319
65 3300005985 Ga0081539_10001415 Ga0081539_1000141536 319
66 3300006844 Ga0075428_100368162 Ga0075428_1003681622 319
67 3300006880 Ga0075429_100378399 Ga0075429_1003783991 319
68 3300009147 Ga0114129_10174392 Ga0114129_101743921 319
69 3300011119 Ga0105246_10246303 Ga0105246_102463032 319
70 3300014325 Ga0163163_10007424 Ga0163163_100074242 319
71 3300027907 Ga0207428_10002041 Ga0207428_1000204114 319
72 3300028380 Ga0268265_10070858 Ga0268265_100708581 319
73 3300028653 Ga0265323_10008315 Ga0265323_100083153 319
74 3300034820 Ga0373959_0000065 Ga0373959_0000065_10662_11621 319
75 3300042876 Ga0451577_0075435 Ga0451577_0075435_1649_2614 319
76 3300042876 Ga0451577_0311776 Ga0451577_0311776_59_1021 319
77 3300044712 Ga0453684_0186724 Ga0453684_0186724_504_1466 319
78 3300045051 Ga0451576_0049819 Ga0451576_0049819_741_1706 319
79 3300045051 Ga0451576_0194323 Ga0451576_0194323_464_1426 319
80 3300049593 Ga0501077_0115345 Ga0501077_0115345_244_1206 319
81 3300049743 Ga0501081_0072141 Ga0501081_0072141_1183_2145 319
82 3300050507 nmdc:mga05p37_191947_c1 nmdc:mga05p37_191947_c1_1084_2046 319
83 3300050508 nmdc:mga09592_174172_c1 nmdc:mga09592_174172_c1_583_1542 319
84 3300050511 nmdc:mga08y16_211502_c1 nmdc:mga08y16_211502_c1_801_1760 319
85 3300050515 nmdc:mga0a205_656_c1 nmdc:mga0a205_656_c1_4514_5473 319
86 3300005293 Ga0065715_10143837 Ga0065715_101438371 320
87 3300005458 Ga0070681_10001038 Ga0070681_100010388 320
88 3300005458 Ga0070681_10126232 Ga0070681_101262321 320
89 3300005467 Ga0070706_100307561 Ga0070706_1003075612 320
90 3300005617 Ga0068859_100613162 Ga0068859_1006131621 320
91 3300005842 Ga0068858_100047575 Ga0068858_1000475755 320
92 3300006028 Ga0070717_10000280 Ga0070717_1000028036 320
93 3300006871 Ga0075434_100064988 Ga0075434_1000649884 320
94 3300006931 Ga0097620_100613165 Ga0097620_1006131651 320
95 3300009093 Ga0105240_10141933 Ga0105240_101419332 320
96 3300009551 Ga0105238_10361177 Ga0105238_103611772 320
97 3300025922 Ga0207646_10026528 Ga0207646_100265281 320
98 3300025928 Ga0207700_10015583 Ga0207700_100155831 320
99 3300025931 Ga0207644_10261977 Ga0207644_102619771 320
100 3300025940 Ga0207691_10185010 Ga0207691_101850101 320
101 3300025949 Ga0207667_10103379 Ga0207667_101033794 320
102 3300026078 Ga0207702_10257525 Ga0207702_102575252 320
103 3300031548 Ga0307408_100114097 Ga0307408_1001140972 320
104 3300032004 Ga0307414_10251340 Ga0307414_102513401 320
105 3300035086 Ga0373934_0015662 Ga0373934_0015662_786_1793 320
106 3300035172 Ga0373955_0006383 Ga0373955_0006383_96_1103 320
107 3300035410 Ga0373924_0063086 Ga0373924_0063086_89_1096 320
108 3300035724 Ga0373933_0028637 Ga0373933_0028637_1058_2065 320
109 3300036401 Ga0373937_0037998 Ga0373937_0037998_395_1402 320
110 3300042530 Ga0450916_004117 Ga0450916_004117_300_1265 320
111 3300046462 Ga0495651_0071356 Ga0495651_0071356_1315_2322 320
112 3300046463 Ga0495653_0002241 Ga0495653_0002241_14130_15137 320
113 3300046477 Ga0495664_0022296 Ga0495664_0022296_271_1278 320
114 3300046511 Ga0495608_0145903 Ga0495608_0145903_97_1104 320
115 3300046516 Ga0495628_0090408 Ga0495628_0090408_639_1646 320
116 3300046529 Ga0495652_0006139 Ga0495652_0006139_8145_9152 320
117 3300046531 Ga0495665_0072350 Ga0495665_0072350_26_1033 320
118 3300046536 Ga0495587_0022399 Ga0495587_0022399_108_1115 320
119 3300046543 Ga0495645_0000818 Ga0495645_0000818_2203_3210 320
120 3300046559 Ga0495667_0062530 Ga0495667_0062530_279_1286 320
121 3300046675 Ga0495657_0224991 Ga0495657_0224991_40_1047 320
122 3300046678 Ga0495599_0001634 Ga0495599_0001634_11502_12509 320
123 3300046679 Ga0495623_0055527 Ga0495623_0055527_400_1407 320
124 3300046680 Ga0495646_0073370 Ga0495646_0073370_524_1531 320
125 3300046689 Ga0495613_0029105 Ga0495613_0029105_3076_4083 320
126 3300047317 Ga0495604_0014103 Ga0495604_0014103_5072_6079 320
127 3300047319 Ga0495674_0122912 Ga0495674_0122912_243_1250 320
128 3300047444 Ga0495675_0049122 Ga0495675_0049122_421_1428 320
129 3300047471 Ga0495684_0010298 Ga0495684_0010298_753_1760 320
130 3300047471 Ga0495684_0013000 Ga0495684_0013000_5019_6026 320
131 3300048088 Ga0495602_0049418 Ga0495602_0049418_1242_2249 320
132 3300049742 Ga0501080_0018301 Ga0501080_0018301_175_1155 320
133 3300049853 Ga0501226_000028 Ga0501226_000028_85918_86883 320
134 3300050512 nmdc:mga0n895_334640_c1 nmdc:mga0n895_334640_c1_401_1522 320
135 3300053077 Ga0495601_0066582 Ga0495601_0066582_126_1133 320
136 3300060353 Ga0501082_0369869 Ga0501082_0369869_71_1051 320
137 3300002774 JGI25150J39212_1001220 JGI25150J39212_10012202 321
138 3300003215 JGI25153J46596_10017194 JGI25153J46596_100171942 321
139 3300003775 Ga0055524_1001681 Ga0055524_100168112 321
140 3300005434 Ga0070709_10081137 Ga0070709_100811372 321
141 3300005438 Ga0070701_10156544 Ga0070701_101565441 321
142 3300005445 Ga0070708_100182151 Ga0070708_1001821511 321
143 3300005445 Ga0070708_100254457 Ga0070708_1002544571 321
144 3300005468 Ga0070707_100352889 Ga0070707_1003528891 321
145 3300005536 Ga0070697_100128644 Ga0070697_1001286442 321
146 3300005545 Ga0070695_100095189 Ga0070695_1000951892 321
147 3300005617 Ga0068859_100366641 Ga0068859_1003666412 321
148 3300005618 Ga0068864_100358328 Ga0068864_1003583281 321
149 3300006844 Ga0075428_100197484 Ga0075428_1001974842 321
150 3300006846 Ga0075430_100341493 Ga0075430_1003414931 321
151 3300006880 Ga0075429_100217943 Ga0075429_1002179431 321
152 3300006881 Ga0068865_100103850 Ga0068865_1001038502 321
153 3300006931 Ga0097620_100366672 Ga0097620_1003666722 321
154 3300006931 Ga0097620_100404906 Ga0097620_1004049062 321
155 3300009094 Ga0111539_10326412 Ga0111539_103264122 321
156 3300009177 Ga0105248_10146186 Ga0105248_101461861 321
157 3300025245 Ga0207425_1004341 Ga0207425_10043416 321
158 3300025263 Ga0209565_1001894 Ga0209565_100189410 321
159 3300025263 Ga0209565_1010325 Ga0209565_10103252 321
160 3300025291 Ga0209675_1012120 Ga0209675_10121202 321
161 3300025295 Ga0209564_1020302 Ga0209564_10203022 321
162 3300025299 Ga0209256_1002317 Ga0209256_100231711 321
163 3300025299 Ga0209256_1024459 Ga0209256_10244592 321
164 3300025910 Ga0207684_10195656 Ga0207684_101956561 321
165 3300025938 Ga0207704_10094222 Ga0207704_100942224 321
166 3300026095 Ga0207676_10231314 Ga0207676_102313142 321
167 3300027907 Ga0207428_10045216 Ga0207428_100452163 321
168 3300031456 Ga0307513_10201287 Ga0307513_102012872 321
169 3300031728 Ga0316578_10006408 Ga0316578_100064085 321
170 3300032137 Ga0316585_10045722 Ga0316585_100457222 321
171 3300036712 Ga0316584_0099524 Ga0316584_0099524_374_1387 321
172 3300037588 Ga0316581_0055525 Ga0316581_0055525_98_1111 321
173 3300044712 Ga0453684_0098550 Ga0453684_0098550_178_1167 321
174 3300044712 Ga0453684_0431592 Ga0453684_0431592_134_1177 321
175 3300045051 Ga0451576_0007164 Ga0451576_0007164_845_1828 321
176 3300046472 Ga0495580_0021365 Ga0495580_0021365_1011_2042 321
177 3300049824 Ga0501045_0169374 Ga0501045_0169374_40_1206 321
178 3300050509 nmdc:mga0qj67_329272_c1 nmdc:mga0qj67_329272_c1_22_1014 321
179 3300050510 nmdc:mga06r32_119195_c1 nmdc:mga06r32_119195_c1_1324_2316 321
180 3300050511 nmdc:mga08y16_182043_c1 nmdc:mga08y16_182043_c1_522_1514 321

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13495

Phage_int_SAM_4

Phage integrase, N-terminal SAM-like domain

10

94

0.98

PF00589

Phage_integrase

Phage integrase family

109

312

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
2a3v-assembly1.cif.gz_A structural basis for broad dna-specificity in integron recombination 0.8459 8 321
2a3v-assembly1.cif.gz_C structural basis for broad dna-specificity in integron recombination 0.8378 9 321
2a3v-assembly1.cif.gz_A structural basis for broad dna-specificity in integron recombination 0.8334 8 321
2a3v-assembly1.cif.gz_C structural basis for broad dna-specificity in integron recombination 0.8207 9 321
2a3v-assembly1.cif.gz_D structural basis for broad dna-specificity in integron recombination 0.8189 6 321
ID Description Score Start End Superfamily
2a3vB01 Mainly Alpha;Orthogonal Bundle;DNA polymerase; domain 1;Tyrosine recombinase, N-terminal domain 0.9419 6 92 1.10.150.130
2a3vB02 Mainly Alpha;Orthogonal Bundle;hpI Integrase; Chain A;Intergrase catalytic core 0.8933 103 311 1.10.443.10
2a3vB01 Mainly Alpha;Orthogonal Bundle;DNA polymerase; domain 1;Tyrosine recombinase, N-terminal domain 0.8663 6 92 1.10.150.130
2a3vB02 Mainly Alpha;Orthogonal Bundle;hpI Integrase; Chain A;Intergrase catalytic core 0.8651 103 311 1.10.443.10
4a8eA02 Mainly Alpha;Orthogonal Bundle;hpI Integrase; Chain A;Intergrase catalytic core 0.8415 100 307 1.10.443.10
ID Description Score Start End GO Terms
AF-A0A3M1DU74-F1-model_v4 Core-binding (CB) domain-containing protein 0.9997 1 91 GO:0003677
GO:0015074
AF-A0A1Y6BKU9-F1-model_v4 Phage integrase, N-terminal SAM-like domain 0.9973 1 90 GO:0003677
GO:0015074
AF-A0A1V5QTT0-F1-model_v4 Site-specific tyrosine recombinase XerC 0.985 127 231 GO:0003677
GO:0006310
GO:0015074
AF-H6V4J6-F1-model_v4 Integrase 0.9829 147 279 GO:0003677
GO:0006310
GO:0015074
AF-A0A1P8WPA9-F1-model_v4 Integrase/recombinase 0.9753 166 262 GO:0003677
GO:0006310
GO:0015074

Feature Viewer

pLDDT pTM Quality
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Predicted Structure (AlphaFold2)

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