F272203

General Info

Members Datasets Scaffolds Average Seq Length
178 142 356 209

Family's Representative Sequence

Representative Sequence 3300028379|Ga0268266_10344429|Ga0268266_103444292
Length 250
Sequence LRRLGYARLFPEAEKPKIERLPLDFRGWWGAVAGLIFGRMTYSSDVAFTPSVKEIQARKGSRRAYARMEESGSWDTRIPPDLAEFIGQQRSVFLATANREGQPYVQHRGGPPGFIHVLDDQTLAFADFAGNRQYITMGNLSENPKAQLFLIDYATRRRVKIWGEARVVEGDDALVAKLMPAHYRAKADQVLVFTVTAWDSNCPQHIPRRFEEEDVRTLLGERDQRIAELESELAALKARLASGEGAARSR

Samples

Sample ID Description Type Environment
1 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
2 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
3 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
4 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
5 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
6 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
7 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
8 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
9 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
10 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
11 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
12 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
13 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
14 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
15 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
16 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
17 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
18 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
19 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
20 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
21 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
22 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
23 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
24 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
25 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
26 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
27 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
28 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
29 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
30 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
31 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
32 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
33 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
34 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
35 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
36 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
37 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
44 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
45 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
46 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
47 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
48 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
49 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
50 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
51 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
52 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
53 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
54 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
55 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
56 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
57 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
58 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
59 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
60 3300041492 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_2 MetaG Metagenome Unclassified
61 3300041496 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_4 MetaG Metagenome Unclassified
62 3300041505 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_9 MetaG Metagenome Unclassified
63 3300041507 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_10 MetaG Metagenome Unclassified
64 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
65 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
66 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
67 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
68 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
69 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
70 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
71 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
72 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
73 3300046537 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere Metagenome Rhizosphere
74 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
75 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
76 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
77 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
78 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
79 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
80 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
81 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
82 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
83 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
84 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
85 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
86 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
87 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
88 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
89 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
90 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
91 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
92 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
93 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
94 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
95 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
96 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
97 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
98 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
99 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
100 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
101 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
102 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
103 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
104 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
105 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
106 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
107 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
108 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
109 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
110 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
111 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
112 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
113 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
114 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
115 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
116 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
117 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
118 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
119 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
120 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
121 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
122 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
123 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
124 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
125 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
126 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
127 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
128 3300053083 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 rhizosphere Metagenome Rhizosphere
129 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
130 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
131 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
132 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
133 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
134 2513237141 Bradyrhizobium sp. TV2a.2 Isolate Nodule
135 2515154113 Rhizobium ruizarguesonis Vc2 Isolate Nodule
136 2515154114 Rhizobium ruizarguesonis Vh3 Isolate Nodule
137 2643221544 Pelomonas sp. Root1444 Isolate Unclassified
138 2791355197 Bradyrhizobium sp. C9 Isolate Nodule
139 2904578770 Phyllobacterium sp. 586 Isolate Unclassified
140 2906610324
141 2922425934
142 3005474847 Bradyrhizobium sp. CCBAU 53421 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 96.02
Metatranscriptomes 0
Isolates 3.98

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.81
Nodule 2.81
Rhizoplane 9.55
Rhizosphere 75.84
Stem 0
Stem Tuber 0
Unclassified 1.69

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0268266_10344429 3300028379 Bacteria 1399
2 Ga0055528_1000039 3300003790 Bacteria 112899
3 Ga0070680_100094860 3300005336 Bacteria 2473
4 Ga0070680_100521428 3300005336 Bacteria 1017
5 Ga0070674_100095595 3300005356 Bacteria 2154
6 Ga0070711_100556540 3300005439 Unclassified 952
7 Ga0070681_10005417 3300005458 Bacteria 12325
8 Ga0070681_10194342 3300005458 Bacteria 1948
9 Ga0070679_100006924 3300005530 Bacteria 10575
10 Ga0070679_100053807 3300005530 Bacteria 4007
11 Ga0070684_100011738 3300005535 Bacteria 6987
12 Ga0070684_100069727 3300005535 Bacteria 3092
13 Ga0070697_100319051 3300005536 Bacteria 1338
14 Ga0070695_100583460 3300005545 Bacteria 875
15 Ga0070704_100192733 3300005549 Bacteria 1639
16 Ga0070664_100726993 3300005564 Bacteria 926
17 Ga0070702_100544410 3300005615 Bacteria 860
18 Ga0068852_100920156 3300005616 Bacteria 892
19 Ga0068861_100029391 3300005719 Bacteria 4021
20 Ga0068860_100396871 3300005843 Bacteria 1364
21 Ga0081455_10099949 3300005937 Bacteria 2332
22 Ga0075428_100496453 3300006844 Bacteria 1306
23 Ga0075430_100040422 3300006846 Bacteria 3947
24 Ga0075430_100516812 3300006846 Bacteria 985
25 Ga0075431_100005142 3300006847 Bacteria 12873
26 Ga0075434_100032115 3300006871 Bacteria 5176
27 Ga0075429_100034127 3300006880 Bacteria 4421
28 Ga0075429_100231427 3300006880 Bacteria 1619
29 Ga0099795_10215878 3300007788 Bacteria 814
30 Ga0105240_10063152 3300009093 Bacteria 4608
31 Ga0105240_10068990 3300009093 Bacteria 4377
32 Ga0105245_10000114 3300009098 Bacteria 78195
33 Ga0105237_10515761 3300009545 Bacteria 1202
34 Ga0105238_10256041 3300009551 Bacteria 1729
35 Ga0105249_10011044 3300009553 Bacteria 7935
36 Ga0105246_10220050 3300011119 Bacteria 1488
37 Ga0157370_10006310 3300013104 Bacteria 13100
38 Ga0163163_10014200 3300014325 Bacteria 7316
39 Ga0157379_10854056 3300014968 Bacteria 861
40 Ga0213872_10211113 3300021361 Bacteria 829
41 Ga0213874_10024850 3300021377 Bacteria 1684
42 Ga0209673_1000161 3300025273 Bacteria 142073
43 Ga0209051_1024170 3300025303 Bacteria 2506
44 Ga0207707_10002774 3300025912 Bacteria 15620
45 Ga0207707_10020305 3300025912 Bacteria 5800
46 Ga0207695_10046263 3300025913 Bacteria 4613
47 Ga0207695_10232666 3300025913 Bacteria 1746
48 Ga0207671_10014415 3300025914 Bacteria 6248
49 Ga0207660_10460237 3300025917 Bacteria 1029
50 Ga0207652_10011318 3300025921 Bacteria 7189
51 Ga0207712_10008096 3300025961 Bacteria 6649
52 Ga0268265_10698363 3300028380 Bacteria 980
53 Ga0268264_10464369 3300028381 Bacteria 1229
54 Ga0307509_10157975 3300031507 Bacteria 2170
55 Ga0307408_100521148 3300031548 Bacteria 1044
56 Ga0307405_10200737 3300031731 Bacteria 1448
57 Ga0307407_10294401 3300031903 Bacteria 1129
58 Ga0307412_10567522 3300031911 Bacteria 956
59 Ga0307411_10015816 3300032005 Bacteria 4251
60 Ga0307415_100136874 3300032126 Bacteria 1864
61 Ga0307415_100164404 3300032126 Bacteria 1724
62 Ga0307507_10053916 3300033179 Bacteria 3835
63 Ga0307510_10093848 3300033180 Bacteria 2830
64 Ga0373939_0071354 3300035114 Bacteria 1132
65 Ga0373943_0453705 3300035170 Bacteria 745
66 Ga0373946_0169216 3300035171 Bacteria 1030
67 Ga0373927_0015056 3300035695 Bacteria 5113
68 Ga0400483_058339 3300039062 Bacteria 1309
69 Ga0451807_0564784 3300041486 Bacteria 4458
70 Ga0451835_0164247 3300041492 Bacteria 1178
71 Ga0451839_0512986 3300041496 Bacteria 1743
72 Ga0451849_0137321 3300041505 Bacteria 5277
73 Ga0451851_0164427 3300041507 Bacteria 2969
74 Ga0451853_2673171 3300041512 Bacteria 12089
75 Ga0453684_0013277 3300044712 Bacteria 13412
76 Ga0495639_0108918 3300046475 Bacteria 1313
77 Ga0495585_0112935 3300046492 Bacteria 1443
78 Ga0495594_0174939 3300046499 Bacteria 1221
79 Ga0495630_0574434 3300046517 Bacteria 864
80 Ga0495631_0198088 3300046518 Bacteria 859
81 Ga0495637_0116144 3300046520 Bacteria 1033
82 Ga0495648_0245990 3300046524 Unclassified 866
83 Ga0495598_0027992 3300046537 Bacteria 1559
84 Ga0495633_0317516 3300046558 Bacteria 707
85 Ga0495656_0067102 3300046615 Bacteria 1582
86 Ga0495668_0289849 3300046616 Bacteria 897
87 Ga0495611_0218294 3300046648 Bacteria 887
88 Ga0495625_0252862 3300046660 Bacteria 1143
89 Ga0495659_0192228 3300046664 Bacteria 834
90 Ga0495588_0018219 3300046674 Bacteria 3420
91 Ga0495647_0019790 3300046681 Bacteria 2411
92 Ga0495670_0138281 3300046691 Bacteria 1272
93 Ga0495589_0034678 3300046794 Bacteria 2532
94 Ga0495636_0044430 3300047318 Bacteria 1850
95 Ga0495676_0253131 3300047321 Bacteria 1200
96 Ga0495684_0162867 3300047471 Bacteria 1663
97 Ga0496102_0195309 3300048905 Bacteria 1907
98 Ga0496102_0198117 3300048905 Bacteria 1893
99 Ga0496104_0026483 3300048907 Bacteria 5355
100 Ga0496105_0004938 3300048908 Bacteria 10082
101 Ga0496106_0069287 3300048909 Bacteria 2692
102 Ga0496107_0477828 3300048910 Bacteria 925
103 Ga0496108_0007882 3300048911 Bacteria 8634
104 Ga0496109_0207658 3300048912 Bacteria 1842
105 Ga0496110_0155195 3300048913 Bacteria 2073
106 Ga0496110_0296821 3300048913 Bacteria 1472
107 Ga0496111_0063030 3300048914 Bacteria 2688
108 Ga0496111_0415805 3300048914 Bacteria 993
109 Ga0496112_0204837 3300048915 Bacteria 1931
110 Ga0496113_0370054 3300048916 Bacteria 1150
111 Ga0496114_0086348 3300048917 Bacteria 2659
112 Ga0496115_0009437 3300048918 Bacteria 7249
113 Ga0496116_0007501 3300048919 Bacteria 9656
114 Ga0496119_0001996 3300048922 Bacteria 23139
115 Ga0501033_0014921 3300049570 Bacteria 5898
116 Ga0501036_0001584 3300049572 Bacteria 17597
117 Ga0501038_0002324 3300049574 Bacteria 17693
118 Ga0501039_0001731 3300049575 Bacteria 16079
119 Ga0501039_0642813 3300049575 Bacteria 831
120 Ga0501040_0007458 3300049576 Bacteria 7084
121 Ga0501041_0003928 3300049577 Bacteria 8572
122 Ga0501041_0063449 3300049577 Bacteria 2262
123 Ga0501041_0173289 3300049577 Bacteria 1350
124 Ga0501042_0004022 3300049578 Bacteria 9314
125 Ga0501046_0128385 3300049580 Bacteria 1924
126 Ga0501048_0003547 3300049582 Bacteria 11867
127 Ga0501048_0194378 3300049582 Bacteria 1438
128 Ga0501069_0409458 3300049585 Bacteria 803
129 Ga0501070_0150345 3300049586 Bacteria 1921
130 Ga0501071_0001273 3300049587 Bacteria 14322
131 Ga0501072_0003242 3300049588 Bacteria 12219
132 Ga0501072_0109140 3300049588 Bacteria 2202
133 Ga0501072_0353969 3300049588 Bacteria 1166
134 Ga0501074_0111630 3300049590 Bacteria 1956
135 Ga0501075_0001387 3300049591 Bacteria 15753
136 Ga0501075_0014056 3300049591 Bacteria 5731
137 Ga0501075_0290675 3300049591 Bacteria 1245
138 Ga0501075_0370320 3300049591 Bacteria 1092
139 Ga0501076_0012259 3300049592 Bacteria 6410
140 Ga0501076_0111703 3300049592 Bacteria 2209
141 Ga0501077_0005721 3300049593 Bacteria 7569
142 Ga0501077_0186728 3300049593 Bacteria 1317
143 Ga0501079_0011447 3300049741 Bacteria 6772
144 Ga0501079_0015703 3300049741 Bacteria 5784
145 Ga0501080_0093493 3300049742 Bacteria 2792
146 Ga0501080_0870603 3300049742 Bacteria 787
147 Ga0501081_0043935 3300049743 Bacteria 3066
148 Ga0501035_0173731 3300049822 Bacteria 1860
149 Ga0501035_0223321 3300049822 Bacteria 1608
150 Ga0501045_0001307 3300049824 Bacteria 16536
151 Ga0501045_0038485 3300049824 Bacteria 3479
152 Ga0501045_0386663 3300049824 Bacteria 1041
153 nmdc:mga09592_15138_c1 3300050508 Bacteria 6302
154 nmdc:mga09592_327010_c1 3300050508 Bacteria 1328
155 nmdc:mga0qj67_37785_c1 3300050509 Bacteria 3784
156 nmdc:mga06r32_5105_c1 3300050510 Bacteria 11805
157 nmdc:mga06r32_995899_c1 3300050510 Bacteria 791
158 nmdc:mga0n895_6320_c1 3300050512 Bacteria 10042
159 Ga0495655_0012935 3300053083 Bacteria 1713
160 Ga0500618_003050 3300053125 Bacteria 5943
161 Ga0500636_0358342 3300053177 Unclassified 693
162 Ga0501084_0009744 3300054114 Bacteria 7947
163 Ga0501084_0127010 3300054114 Bacteria 2146
164 Ga0501084_0150244 3300054114 Bacteria 1963
165 Ga0501082_0019095 3300060353 Bacteria 5906
166 Ga0501082_0026112 3300060353 Bacteria 5034
167 Ga0501082_0615404 3300060353 Bacteria 950
168 Ga0530510_0022177 3300061734 Bacteria 4522
169 Ga0530510_0029160 3300061734 Bacteria 3960
170 2513891643 2513237141 Bacteria 8496279
171 2515636536 2515154113 Bacteria 7807172
172 2515642320 2515154114 Bacteria 7848616
173 2643741881 2643221544 Bacteria 5886209
174 2793073871 2791355197 Bacteria 8420563
175 2904582145 2904578770 Bacteria 5302906
176 2906614451
177 2922426285
178 3005475649 3005474847 Bacteria 9259049
179 Ga0268266_10344429
180 Ga0055528_1000039
181 Ga0070680_100094860
182 Ga0070680_100521428
183 Ga0070674_100095595
184 Ga0070711_100556540
185 Ga0070681_10005417
186 Ga0070681_10194342
187 Ga0070679_100006924
188 Ga0070679_100053807
189 Ga0070684_100011738
190 Ga0070684_100069727
191 Ga0070697_100319051
192 Ga0070695_100583460
193 Ga0070704_100192733
194 Ga0070664_100726993
195 Ga0070702_100544410
196 Ga0068852_100920156
197 Ga0068861_100029391
198 Ga0068860_100396871
199 Ga0081455_10099949
200 Ga0075428_100496453
201 Ga0075430_100040422
202 Ga0075430_100516812
203 Ga0075431_100005142
204 Ga0075434_100032115
205 Ga0075429_100034127
206 Ga0075429_100231427
207 Ga0099795_10215878
208 Ga0105240_10063152
209 Ga0105240_10068990
210 Ga0105245_10000114
211 Ga0105237_10515761
212 Ga0105238_10256041
213 Ga0105249_10011044
214 Ga0105246_10220050
215 Ga0157370_10006310
216 Ga0163163_10014200
217 Ga0157379_10854056
218 Ga0213872_10211113
219 Ga0213874_10024850
220 Ga0209673_1000161
221 Ga0209051_1024170
222 Ga0207707_10002774
223 Ga0207707_10020305
224 Ga0207695_10046263
225 Ga0207695_10232666
226 Ga0207671_10014415
227 Ga0207660_10460237
228 Ga0207652_10011318
229 Ga0207712_10008096
230 Ga0268265_10698363
231 Ga0268264_10464369
232 Ga0307509_10157975
233 Ga0307408_100521148
234 Ga0307405_10200737
235 Ga0307407_10294401
236 Ga0307412_10567522
237 Ga0307411_10015816
238 Ga0307415_100136874
239 Ga0307415_100164404
240 Ga0307507_10053916
241 Ga0307510_10093848
242 Ga0373939_0071354
243 Ga0373943_0453705
244 Ga0373946_0169216
245 Ga0373927_0015056
246 Ga0400483_058339
247 Ga0451807_0564784
248 Ga0451835_0164247
249 Ga0451839_0512986
250 Ga0451849_0137321
251 Ga0451851_0164427
252 Ga0451853_2673171
253 Ga0453684_0013277
254 Ga0495639_0108918
255 Ga0495585_0112935
256 Ga0495594_0174939
257 Ga0495630_0574434
258 Ga0495631_0198088
259 Ga0495637_0116144
260 Ga0495648_0245990
261 Ga0495598_0027992
262 Ga0495633_0317516
263 Ga0495656_0067102
264 Ga0495668_0289849
265 Ga0495611_0218294
266 Ga0495625_0252862
267 Ga0495659_0192228
268 Ga0495588_0018219
269 Ga0495647_0019790
270 Ga0495670_0138281
271 Ga0495589_0034678
272 Ga0495636_0044430
273 Ga0495676_0253131
274 Ga0495684_0162867
275 Ga0496102_0195309
276 Ga0496102_0198117
277 Ga0496104_0026483
278 Ga0496105_0004938
279 Ga0496106_0069287
280 Ga0496107_0477828
281 Ga0496108_0007882
282 Ga0496109_0207658
283 Ga0496110_0155195
284 Ga0496110_0296821
285 Ga0496111_0063030
286 Ga0496111_0415805
287 Ga0496112_0204837
288 Ga0496113_0370054
289 Ga0496114_0086348
290 Ga0496115_0009437
291 Ga0496116_0007501
292 Ga0496119_0001996
293 Ga0501033_0014921
294 Ga0501036_0001584
295 Ga0501038_0002324
296 Ga0501039_0001731
297 Ga0501039_0642813
298 Ga0501040_0007458
299 Ga0501041_0003928
300 Ga0501041_0063449
301 Ga0501041_0173289
302 Ga0501042_0004022
303 Ga0501046_0128385
304 Ga0501048_0003547
305 Ga0501048_0194378
306 Ga0501069_0409458
307 Ga0501070_0150345
308 Ga0501071_0001273
309 Ga0501072_0003242
310 Ga0501072_0109140
311 Ga0501072_0353969
312 Ga0501074_0111630
313 Ga0501075_0001387
314 Ga0501075_0014056
315 Ga0501075_0290675
316 Ga0501075_0370320
317 Ga0501076_0012259
318 Ga0501076_0111703
319 Ga0501077_0005721
320 Ga0501077_0186728
321 Ga0501079_0011447
322 Ga0501079_0015703
323 Ga0501080_0093493
324 Ga0501080_0870603
325 Ga0501081_0043935
326 Ga0501035_0173731
327 Ga0501035_0223321
328 Ga0501045_0001307
329 Ga0501045_0038485
330 Ga0501045_0386663
331 nmdc:mga09592_15138_c1
332 nmdc:mga09592_327010_c1
333 nmdc:mga0qj67_37785_c1
334 nmdc:mga06r32_5105_c1
335 nmdc:mga06r32_995899_c1
336 nmdc:mga0n895_6320_c1
337 Ga0495655_0012935
338 Ga0500618_003050
339 Ga0500636_0358342
340 Ga0501084_0009744
341 Ga0501084_0127010
342 Ga0501084_0150244
343 Ga0501082_0019095
344 Ga0501082_0026112
345 Ga0501082_0615404
346 Ga0530510_0022177
347 Ga0530510_0029160
348 2513891643
349 2515636536
350 2515642320
351 2643741881
352 2793073871
353 2904582145
354 2906614451
355 2922426285
356 3005475649

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01243

Putative_PNPOx

Pyridoxamine 5'-phosphate oxidase

78

172

0.97

Structural Annotation

Top 5 Hits

ID Description Score Start End
7kq2-assembly1.cif.gz_A 1.98 a resolution crystal structure of group a streptococcus h111a hupz-v5-his6 0.8183 43 166
7kq2-assembly1.cif.gz_A 1.98 a resolution crystal structure of group a streptococcus h111a hupz-v5-his6 0.8061 43 166
5jv4-assembly3.cif.gz_F structure of f420 binding protein, msmeg_6526, from mycobacterium smegmatis with f420 bound 0.7728 52 166
7eg5-assembly1.cif.gz_B fmn-bound form of yvic from lactococcus lactis subsp. lactis il1403 0.7709 43 167
7kpz-assembly1.cif.gz_A 1.70 a resolution crystal structure of group a streptococcus hupz-v5-his6 0.7708 43 175
ID Description Score Start End Superfamily
2htdA00 Mainly Beta;Roll;Pnp Oxidase; Chain A;Electron Transport, Fmn-binding Protein; Chain A 0.8049 40 164 2.30.110.10
5escD00 Mainly Beta;Roll;Pnp Oxidase; Chain A;Electron Transport, Fmn-binding Protein; Chain A 0.7705 43 167 2.30.110.10
2htdA00 Mainly Beta;Roll;Pnp Oxidase; Chain A;Electron Transport, Fmn-binding Protein; Chain A 0.764 40 164 2.30.110.10
5escD00 Mainly Beta;Roll;Pnp Oxidase; Chain A;Electron Transport, Fmn-binding Protein; Chain A 0.759 43 167 2.30.110.10
5jv4A00 Mainly Beta;Roll;Pnp Oxidase; Chain A;Electron Transport, Fmn-binding Protein; Chain A 0.7482 52 166 2.30.110.10
ID Description Score Start End GO Terms
AF-A0A8A3LST6-F1-model_v4 deleted 0.9859 1 209
AF-Q2IZF3-F1-model_v4 Pyridoxamine 5'-phosphate oxidase-related, FMN-binding 0.9852 6 201
AF-A0A1W9HUD8-F1-model_v4 Pyridoxamine 5'-phosphate oxidase 0.9848 8 204
AF-A0A1M3PS23-F1-model_v4 Pyridoxamine 5'-phosphate oxidase 0.9848 6 201
AF-A0A529KV53-F1-model_v4 Pyridoxamine 5'-phosphate oxidase 0.9839 40 143

Map