F270628
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 177 | 131 | 176 | 253 |
Family's Representative Sequence
| Representative Sequence | 3300041501|Ga0451845_0872255|Ga0451845_0872255_748_1593 |
| Length | 281 |
| Sequence | VAPSSILKRAIATECGCSRILQKIAEVEMLATRVIPSLLLKGSGLVKTTKFKNPVYIGDPINAIKIFNTKEVDELVLLDITASKEGRGPAFETIRNITNECFMPLSYGGGIRSIDDIRAILKAGIEKIVVNHAAIADPGLIKKAASEFGSQAIIVSIDVKKSLWGGYQVYSSSGAKVWEKDPVRWARMAEGLGAGEIYLTAVDNEGTMKGYDLELIQSVSSAVRIPVIASGGAATIEDFRMAKSQGGASAVAAGAMFVFQGPHRAVLITYPPRDALERAFG |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300002773 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS | Metagenome | Endosphere |
| 2 | 3300002774 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA | Metagenome | Endosphere |
| 3 | 3300003215 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF | Metagenome | Endosphere |
| 4 | 3300003320 | Sugarcane root Sample H2 | Metagenome | Unclassified |
| 5 | 3300003323 | Sugarcane root Sample H1 | Metagenome | Unclassified |
| 6 | 3300003354 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS | Metagenome | Endosphere |
| 7 | 3300003771 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 | Metagenome | Endosphere |
| 8 | 3300003775 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 | Metagenome | Endosphere |
| 9 | 3300003790 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 | Metagenome | Endosphere |
| 10 | 3300005289 | Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) | Metagenome | Rhizosphere |
| 11 | 3300005329 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG | Metagenome | Rhizosphere |
| 12 | 3300005331 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG | Metagenome | Rhizosphere |
| 13 | 3300005334 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 | Metagenome | Rhizosphere |
| 14 | 3300005336 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG | Metagenome | Rhizosphere |
| 15 | 3300005337 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG | Metagenome | Rhizosphere |
| 16 | 3300005338 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 | Metagenome | Rhizosphere |
| 17 | 3300005434 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG | Metagenome | Rhizosphere |
| 18 | 3300005435 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG | Metagenome | Rhizosphere |
| 19 | 3300005436 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG | Metagenome | Rhizosphere |
| 20 | 3300005437 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG | Metagenome | Rhizosphere |
| 21 | 3300005439 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG | Metagenome | Rhizosphere |
| 22 | 3300005440 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG | Metagenome | Rhizosphere |
| 23 | 3300005444 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG | Metagenome | Rhizosphere |
| 24 | 3300005466 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG | Metagenome | Rhizosphere |
| 25 | 3300005471 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG | Metagenome | Rhizosphere |
| 26 | 3300005530 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG | Metagenome | Rhizosphere |
| 27 | 3300005535 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG | Metagenome | Rhizosphere |
| 28 | 3300005544 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG | Metagenome | Rhizosphere |
| 29 | 3300005546 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG | Metagenome | Rhizosphere |
| 30 | 3300005548 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG | Metagenome | Rhizosphere |
| 31 | 3300005564 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG | Metagenome | Rhizosphere |
| 32 | 3300005616 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 | Metagenome | Rhizosphere |
| 33 | 3300005617 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 | Metagenome | Rhizosphere |
| 34 | 3300005841 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 | Metagenome | Rhizosphere |
| 35 | 3300005844 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 | Metagenome | Rhizosphere |
| 36 | 3300005983 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 | Metagenome | Rhizosphere |
| 37 | 3300006175 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG | Metagenome | Rhizosphere |
| 38 | 3300006844 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 | Metagenome | Rhizosphere |
| 39 | 3300006846 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 | Metagenome | Rhizosphere |
| 40 | 3300006880 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 | Metagenome | Rhizosphere |
| 41 | 3300006931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 42 | 3300006948 | Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 | Metagenome | Nodule |
| 43 | 3300009093 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG | Metagenome | Rhizosphere |
| 44 | 3300009094 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 45 | 3300009147 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 46 | 3300009545 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG | Metagenome | Rhizosphere |
| 47 | 3300009551 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG | Metagenome | Rhizosphere |
| 48 | 3300010375 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG | Metagenome | Rhizosphere |
| 49 | 3300013102 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG | Metagenome | Rhizosphere |
| 50 | 3300013104 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG | Metagenome | Rhizosphere |
| 51 | 3300013306 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG | Metagenome | Rhizosphere |
| 52 | 3300013307 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG | Metagenome | Rhizosphere |
| 53 | 3300021377 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 | Metagenome | Unclassified |
| 54 | 3300025245 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) | Metagenome | Endosphere |
| 55 | 3300025258 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) | Metagenome | Endosphere |
| 56 | 3300025273 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) | Metagenome | Endosphere |
| 57 | 3300025284 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) | Metagenome | Endosphere |
| 58 | 3300025294 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) | Metagenome | Endosphere |
| 59 | 3300025295 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) | Metagenome | Endosphere |
| 60 | 3300025297 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) | Metagenome | Endosphere |
| 61 | 3300025299 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) | Metagenome | Endosphere |
| 62 | 3300025302 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) | Metagenome | Endosphere |
| 63 | 3300025303 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 64 | 3300025304 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 65 | 3300025898 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 66 | 3300025906 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 67 | 3300025912 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 68 | 3300025913 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 69 | 3300025914 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 70 | 3300025916 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 71 | 3300025924 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 72 | 3300025928 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 73 | 3300025929 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 74 | 3300025933 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 75 | 3300025939 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 76 | 3300025972 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 77 | 3300026142 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 78 | 3300028380 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 79 | 3300031251 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG | Metagenome | Rhizosphere |
| 80 | 3300031507 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM | Metagenome | Unclassified |
| 81 | 3300031548 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 | Metagenome | Rhizosphere |
| 82 | 3300031731 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 | Metagenome | Rhizosphere |
| 83 | 3300031824 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 | Metagenome | Rhizosphere |
| 84 | 3300031852 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 | Metagenome | Rhizosphere |
| 85 | 3300031901 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 | Metagenome | Rhizosphere |
| 86 | 3300031903 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 | Metagenome | Rhizosphere |
| 87 | 3300031995 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 | Metagenome | Rhizosphere |
| 88 | 3300032002 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 | Metagenome | Rhizosphere |
| 89 | 3300032004 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 | Metagenome | Rhizosphere |
| 90 | 3300032005 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 | Metagenome | Rhizosphere |
| 91 | 3300032126 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 | Metagenome | Rhizosphere |
| 92 | 3300035113 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 | Metagenome | Rhizosphere |
| 93 | 3300035695 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 | Metagenome | Rhizosphere |
| 94 | 3300037312 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 | Metagenome | Rhizosphere |
| 95 | 3300037418 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 | Metagenome | Rhizosphere |
| 96 | 3300037466 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 | Metagenome | Rhizosphere |
| 97 | 3300037853 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 | Metagenome | Unclassified |
| 98 | 3300038443 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 | Metagenome | Rhizosphere |
| 99 | 3300039450 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 | Metagenome | Unclassified |
| 100 | 3300041413 | Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 | Metagenome | Rhizosphere |
| 101 | 3300041491 | White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_1 MetaG | Metagenome | Unclassified |
| 102 | 3300041492 | White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_2 MetaG | Metagenome | Unclassified |
| 103 | 3300041494 | White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG | Metagenome | Unclassified |
| 104 | 3300041501 | White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_7 MetaG | Metagenome | Unclassified |
| 105 | 3300041505 | White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_9 MetaG | Metagenome | Unclassified |
| 106 | 3300041511 | White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_12 MetaG | Metagenome | Unclassified |
| 107 | 3300041512 | White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG | Metagenome | Unclassified |
| 108 | 3300042876 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED | Metagenome | Rhizosphere |
| 109 | 3300044712 | Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED | Metagenome | Rhizosphere |
| 110 | 3300045051 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED | Metagenome | Rhizosphere |
| 111 | 3300047320 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere | Metagenome | Rhizosphere |
| 112 | 3300048909 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 | Metagenome | Rhizoplane |
| 113 | 3300048913 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 | Metagenome | Rhizoplane |
| 114 | 3300049570 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 115 | 3300049571 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 116 | 3300049573 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 117 | 3300049574 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 118 | 3300049575 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 119 | 3300049578 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 120 | 3300049581 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 121 | 3300049587 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 | Metagenome | Rhizosphere |
| 122 | 3300049649 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J5_A_0_drought | Metagenome | Rhizosphere |
| 123 | 3300049742 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 | Metagenome | Rhizosphere |
| 124 | 3300049822 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 125 | 3300050492 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation | Metagenome | Endosphere |
| 126 | 3300050507 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation | Metagenome | Rhizosphere |
| 127 | 3300050508 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation | Metagenome | Rhizosphere |
| 128 | 3300050510 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation | Metagenome | Rhizosphere |
| 129 | 3300053088 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere | Metagenome | Endosphere |
| 130 | 3300053119 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere | Metagenome | Endosphere |
| 131 | 8019648815 | Bradyrhizobium sp. GM24.11 | Isolate | Nodule |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 99.44 |
| Metatranscriptomes | 0 |
| Isolates | 0.56 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 15.25 |
| Nodule | 1.13 |
| Rhizoplane | 1.13 |
| Rhizosphere | 74.58 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 7.91 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | JGI25152J39213_1003215 | 3300002773 | Bacteria | 5680 |
| 2 | JGI25152J39213_1003219 | 3300002773 | Bacteria | 5679 |
| 3 | JGI25150J39212_1001241 | 3300002774 | Bacteria | 7406 |
| 4 | JGI25153J46596_10000398 | 3300003215 | Bacteria | 29213 |
| 5 | rootH2_10299236 | 3300003320 | Unclassified | 1372 |
| 6 | rootH1_10000940 | 3300003323 | Bacteria | 88997 |
| 7 | rootH1_10324992 | 3300003323 | Bacteria | 1130 |
| 8 | JGI25160J50197_1004662 | 3300003354 | Bacteria | 5883 |
| 9 | Ga0055526_1000267 | 3300003771 | Bacteria | 43975 |
| 10 | Ga0055524_1000124 | 3300003775 | Bacteria | 90282 |
| 11 | Ga0055524_1000432 | 3300003775 | Bacteria | 35061 |
| 12 | Ga0055528_1000428 | 3300003790 | Bacteria | 33817 |
| 13 | Ga0065704_10005040 | 3300005289 | Bacteria | 5192 |
| 14 | Ga0070683_100029637 | 3300005329 | Unclassified | 4958 |
| 15 | Ga0070670_100601070 | 3300005331 | Bacteria | 984 |
| 16 | Ga0068869_100084313 | 3300005334 | Bacteria | 2378 |
| 17 | Ga0070680_100292016 | 3300005336 | Bacteria | 1382 |
| 18 | Ga0070682_100242687 | 3300005337 | Bacteria | 1294 |
| 19 | Ga0068868_100045999 | 3300005338 | Bacteria | 3416 |
| 20 | Ga0070709_10091127 | 3300005434 | Unclassified | 2011 |
| 21 | Ga0070714_100139409 | 3300005435 | Unclassified | 2175 |
| 22 | Ga0070713_100112767 | 3300005436 | Bacteria | 2373 |
| 23 | Ga0070710_10087292 | 3300005437 | Bacteria | 1833 |
| 24 | Ga0070711_100162700 | 3300005439 | Bacteria | 1693 |
| 25 | Ga0070705_100077149 | 3300005440 | Bacteria | 2034 |
| 26 | Ga0070694_100210901 | 3300005444 | Bacteria | 1452 |
| 27 | Ga0070694_100666452 | 3300005444 | Bacteria | 843 |
| 28 | Ga0070685_10314784 | 3300005466 | Bacteria | 1059 |
| 29 | Ga0070698_100298773 | 3300005471 | Bacteria | 1541 |
| 30 | Ga0070679_100174907 | 3300005530 | Bacteria | 2119 |
| 31 | Ga0070679_100576943 | 3300005530 | Bacteria | 1068 |
| 32 | Ga0070684_100058830 | 3300005535 | Bacteria | 3359 |
| 33 | Ga0070684_100113355 | 3300005535 | Unclassified | 2433 |
| 34 | Ga0070686_100042300 | 3300005544 | Bacteria | 2853 |
| 35 | Ga0070696_100370168 | 3300005546 | Bacteria | 1114 |
| 36 | Ga0070696_100375059 | 3300005546 | Bacteria | 1107 |
| 37 | Ga0070665_100025150 | 3300005548 | Bacteria | 5999 |
| 38 | Ga0070664_100079966 | 3300005564 | Bacteria | 2815 |
| 39 | Ga0068852_100288957 | 3300005616 | Bacteria | 1583 |
| 40 | Ga0068859_100101288 | 3300005617 | Bacteria | 2937 |
| 41 | Ga0068859_100238189 | 3300005617 | Unclassified | 1908 |
| 42 | Ga0068863_100085076 | 3300005841 | Bacteria | 2997 |
| 43 | Ga0068862_100377525 | 3300005844 | Bacteria | 1321 |
| 44 | Ga0081540_1014467 | 3300005983 | Bacteria | 5053 |
| 45 | Ga0070712_100235484 | 3300006175 | Unclassified | 1456 |
| 46 | Ga0075428_100138481 | 3300006844 | Unclassified | 2646 |
| 47 | Ga0075428_100171244 | 3300006844 | Unclassified | 2353 |
| 48 | Ga0075430_100181921 | 3300006846 | Bacteria | 1748 |
| 49 | Ga0075430_100234435 | 3300006846 | Bacteria | 1521 |
| 50 | Ga0075429_100165518 | 3300006880 | Unclassified | 1937 |
| 51 | Ga0097620_100101286 | 3300006931 | Bacteria | 2937 |
| 52 | Ga0097620_100238191 | 3300006931 | Unclassified | 1908 |
| 53 | Ga0099826_10105108 | 3300006948 | Unclassified | 1695 |
| 54 | Ga0105240_10004889 | 3300009093 | Bacteria | 20167 |
| 55 | Ga0105240_10006284 | 3300009093 | Bacteria | 17477 |
| 56 | Ga0105240_11103819 | 3300009093 | Bacteria | 844 |
| 57 | Ga0111539_10041363 | 3300009094 | Bacteria | 5541 |
| 58 | Ga0114129_10018382 | 3300009147 | Bacteria | 9957 |
| 59 | Ga0114129_10053532 | 3300009147 | Bacteria | 5660 |
| 60 | Ga0114129_10733788 | 3300009147 | Bacteria | 1266 |
| 61 | Ga0105237_10001614 | 3300009545 | Bacteria | 29283 |
| 62 | Ga0105238_10147266 | 3300009551 | Bacteria | 2331 |
| 63 | Ga0105239_10000255 | 3300010375 | Bacteria | 79421 |
| 64 | Ga0157371_10017870 | 3300013102 | Bacteria | 5257 |
| 65 | Ga0157370_10034986 | 3300013104 | Bacteria | 4887 |
| 66 | Ga0163162_10013557 | 3300013306 | Bacteria | 7961 |
| 67 | Ga0157372_10011624 | 3300013307 | Bacteria | 9373 |
| 68 | Ga0157372_10014670 | 3300013307 | Bacteria | 8384 |
| 69 | Ga0213874_10006382 | 3300021377 | Bacteria | 2791 |
| 70 | Ga0207425_1000653 | 3300025245 | Bacteria | 19157 |
| 71 | Ga0209129_1000259 | 3300025258 | Bacteria | 53817 |
| 72 | Ga0209129_1001386 | 3300025258 | Bacteria | 13550 |
| 73 | Ga0209673_1001056 | 3300025273 | Bacteria | 31589 |
| 74 | Ga0209130_1003716 | 3300025284 | Bacteria | 6260 |
| 75 | Ga0209025_1014166 | 3300025294 | Bacteria | 4938 |
| 76 | Ga0209564_1000488 | 3300025295 | Bacteria | 65982 |
| 77 | Ga0209564_1006775 | 3300025295 | Bacteria | 6068 |
| 78 | Ga0209758_1000151 | 3300025297 | Bacteria | 162732 |
| 79 | Ga0209758_1007445 | 3300025297 | Bacteria | 7446 |
| 80 | Ga0209256_1000268 | 3300025299 | Bacteria | 91897 |
| 81 | Ga0209256_1000901 | 3300025299 | Bacteria | 36379 |
| 82 | Ga0207426_1000828 | 3300025302 | Bacteria | 33002 |
| 83 | Ga0209051_1010021 | 3300025303 | Bacteria | 4825 |
| 84 | Ga0209257_1019152 | 3300025304 | Bacteria | 2593 |
| 85 | Ga0207692_10113962 | 3300025898 | Unclassified | 1504 |
| 86 | Ga0207699_10038912 | 3300025906 | Unclassified | 2729 |
| 87 | Ga0207707_10036655 | 3300025912 | Unclassified | 4287 |
| 88 | Ga0207695_10005662 | 3300025913 | Bacteria | 16491 |
| 89 | Ga0207695_10025545 | 3300025913 | Bacteria | 6609 |
| 90 | Ga0207671_10004675 | 3300025914 | Bacteria | 12954 |
| 91 | Ga0207663_10111630 | 3300025916 | Bacteria | 1856 |
| 92 | Ga0207694_10448436 | 3300025924 | Bacteria | 1077 |
| 93 | Ga0207700_10404684 | 3300025928 | Unclassified | 1196 |
| 94 | Ga0207664_10222946 | 3300025929 | Unclassified | 1636 |
| 95 | Ga0207706_10040759 | 3300025933 | Bacteria | 4116 |
| 96 | Ga0207665_10368348 | 3300025939 | Unclassified | 1088 |
| 97 | Ga0207668_10132101 | 3300025972 | Bacteria | 1908 |
| 98 | Ga0207698_10326287 | 3300026142 | Bacteria | 1440 |
| 99 | Ga0268265_10208741 | 3300028380 | Unclassified | 1700 |
| 100 | Ga0265327_10039099 | 3300031251 | Unclassified | 2580 |
| 101 | Ga0307509_10155706 | 3300031507 | Bacteria | 2192 |
| 102 | Ga0307408_100018257 | 3300031548 | Bacteria | 4708 |
| 103 | Ga0307408_100563639 | 3300031548 | Unclassified | 1007 |
| 104 | Ga0307405_10000210 | 3300031731 | Bacteria | 21045 |
| 105 | Ga0307413_10080228 | 3300031824 | Bacteria | 2089 |
| 106 | Ga0307410_10014498 | 3300031852 | Bacteria | 4639 |
| 107 | Ga0307406_10114687 | 3300031901 | Bacteria | 1861 |
| 108 | Ga0307407_10006012 | 3300031903 | Bacteria | 5343 |
| 109 | Ga0307409_100003498 | 3300031995 | Bacteria | 8549 |
| 110 | Ga0307409_100030374 | 3300031995 | Unclassified | 3881 |
| 111 | Ga0307416_100160784 | 3300032002 | Bacteria | 2076 |
| 112 | Ga0307414_10558914 | 3300032004 | Bacteria | 1021 |
| 113 | Ga0307414_10593005 | 3300032004 | Unclassified | 993 |
| 114 | Ga0307411_10042415 | 3300032005 | Bacteria | 2903 |
| 115 | Ga0307411_10062923 | 3300032005 | Bacteria | 2477 |
| 116 | Ga0307415_100308968 | 3300032126 | Bacteria | 1313 |
| 117 | Ga0307415_100809174 | 3300032126 | Bacteria | 856 |
| 118 | Ga0373936_0011032 | 3300035113 | Bacteria | 3416 |
| 119 | Ga0373927_0078630 | 3300035695 | Bacteria | 2136 |
| 120 | Ga0395899_0002461 | 3300037312 | Bacteria | 15037 |
| 121 | Ga0395899_0015153 | 3300037312 | Bacteria | 5878 |
| 122 | Ga0395900_0003049 | 3300037418 | Bacteria | 18243 |
| 123 | Ga0395900_0003417 | 3300037418 | Bacteria | 17166 |
| 124 | Ga0395898_0004370 | 3300037466 | Bacteria | 15465 |
| 125 | Ga0436364_0209735 | 3300037853 | Bacteria | 1884 |
| 126 | Ga0395901_0108163 | 3300038443 | Bacteria | 2919 |
| 127 | Ga0395901_0191803 | 3300038443 | Bacteria | 2143 |
| 128 | Ga0436363_0064898 | 3300039450 | Bacteria | 16136 |
| 129 | Ga0439465_0103876 | 3300041413 | Bacteria | 983 |
| 130 | Ga0451833_0386971 | 3300041491 | Bacteria | 23088 |
| 131 | Ga0451835_0378827 | 3300041492 | Bacteria | 31868 |
| 132 | Ga0451837_1060924 | 3300041494 | Unclassified | 3272 |
| 133 | Ga0451845_0872255 | 3300041501 | Unclassified | 1622 |
| 134 | Ga0451849_0092877 | 3300041505 | Bacteria | 25741 |
| 135 | Ga0451855_0510998 | 3300041511 | Bacteria | 25850 |
| 136 | Ga0451853_1342497 | 3300041512 | Bacteria | 31826 |
| 137 | Ga0451577_0000172 | 3300042876 | Bacteria | 142538 |
| 138 | Ga0451577_0003690 | 3300042876 | Bacteria | 16762 |
| 139 | Ga0453684_0000544 | 3300044712 | Bacteria | 142537 |
| 140 | Ga0453684_0005306 | 3300044712 | Bacteria | 25694 |
| 141 | Ga0453684_0036540 | 3300044712 | Bacteria | 6768 |
| 142 | Ga0453684_0243390 | 3300044712 | Unclassified | 2070 |
| 143 | Ga0453684_0393205 | 3300044712 | Unclassified | 1554 |
| 144 | Ga0451576_0000015 | 3300045051 | Bacteria | 579908 |
| 145 | Ga0451576_0114122 | 3300045051 | Unclassified | 2812 |
| 146 | Ga0451576_0128988 | 3300045051 | Unclassified | 2636 |
| 147 | Ga0451576_0320765 | 3300045051 | Bacteria | 1621 |
| 148 | Ga0495672_0001091 | 3300047320 | Bacteria | 27536 |
| 149 | Ga0495672_0072105 | 3300047320 | Bacteria | 1952 |
| 150 | Ga0496106_0065055 | 3300048909 | Unclassified | 2776 |
| 151 | Ga0496110_0482375 | 3300048913 | Bacteria | 1129 |
| 152 | Ga0501033_0000081 | 3300049570 | Bacteria | 90181 |
| 153 | Ga0501034_0037939 | 3300049571 | Bacteria | 4880 |
| 154 | Ga0501034_0052812 | 3300049571 | Bacteria | 4094 |
| 155 | Ga0501037_0189950 | 3300049573 | Bacteria | 1454 |
| 156 | Ga0501038_0002478 | 3300049574 | Bacteria | 17175 |
| 157 | Ga0501038_0199533 | 3300049574 | Unclassified | 1606 |
| 158 | Ga0501039_0008040 | 3300049575 | Bacteria | 8036 |
| 159 | Ga0501039_0169757 | 3300049575 | Unclassified | 1715 |
| 160 | Ga0501042_0150279 | 3300049578 | Bacteria | 1679 |
| 161 | Ga0501047_0035913 | 3300049581 | Bacteria | 4788 |
| 162 | Ga0501047_0134476 | 3300049581 | Bacteria | 2353 |
| 163 | Ga0501071_0097889 | 3300049587 | Bacteria | 2160 |
| 164 | Ga0501198_009084 | 3300049649 | Bacteria | 1453 |
| 165 | Ga0501080_0341054 | 3300049742 | Bacteria | 1354 |
| 166 | Ga0501035_0006726 | 3300049822 | Bacteria | 10748 |
| 167 | Ga0501035_0256432 | 3300049822 | Unclassified | 1484 |
| 168 | nmdc:mga0yw44_197074_c1 | 3300050492 | Bacteria | 1329 |
| 169 | nmdc:mga05p37_59824_c1 | 3300050507 | Bacteria | 4691 |
| 170 | nmdc:mga05p37_770405_c1 | 3300050507 | Bacteria | 1057 |
| 171 | nmdc:mga09592_105407_c1 | 3300050508 | Bacteria | 2417 |
| 172 | nmdc:mga09592_267817_c1 | 3300050508 | Bacteria | 1482 |
| 173 | nmdc:mga09592_603207_c1 | 3300050508 | Unclassified | 940 |
| 174 | nmdc:mga06r32_819306_c1 | 3300050510 | Bacteria | 890 |
| 175 | Ga0500644_0195575 | 3300053088 | Bacteria | 834 |
| 176 | Ga0500595_031251 | 3300053119 | Bacteria | 1788 |
Family Sequences
| Sample | Scaffold | Protein | Protein Length | |
|---|---|---|---|---|
| 1 | 3300049575 | Ga0501039_0169757 | Ga0501039_0169757_382_1032 | 215 |
| 2 | 3300044712 | Ga0453684_0005306 | Ga0453684_0005306_5928_6590 | 220 |
| 3 | 3300032004 | Ga0307414_10558914 | Ga0307414_105589142 | 223 |
| 4 | 3300035113 | Ga0373936_0011032 | Ga0373936_0011032_23_736 | 228 |
| 5 | 3300049571 | Ga0501034_0037939 | Ga0501034_0037939_1816_2613 | 229 |
| 6 | 3300049573 | Ga0501037_0189950 | Ga0501037_0189950_104_901 | 229 |
| 7 | 3300049574 | Ga0501038_0002478 | Ga0501038_0002478_4167_4964 | 229 |
| 8 | 3300049575 | Ga0501039_0008040 | Ga0501039_0008040_235_1032 | 229 |
| 9 | 3300049581 | Ga0501047_0035913 | Ga0501047_0035913_1865_2662 | 229 |
| 10 | 3300049574 | Ga0501038_0199533 | Ga0501038_0199533_116_931 | 230 |
| 11 | 3300049822 | Ga0501035_0256432 | Ga0501035_0256432_125_940 | 230 |
| 12 | iso_pu_bacteria | 8019648815 | 8019656150 | 232 |
| 13 | 3300044712 | Ga0453684_0393205 | Ga0453684_0393205_630_1352 | 236 |
| 14 | 3300049578 | Ga0501042_0150279 | Ga0501042_0150279_606_1376 | 237 |
| 15 | 3300049587 | Ga0501071_0097889 | Ga0501071_0097889_735_1505 | 237 |
| 16 | 3300009147 | Ga0114129_10053532 | Ga0114129_100535324 | 238 |
| 17 | 3300050507 | nmdc:mga05p37_59824_c1 | nmdc:mga05p37_59824_c1_2324_3094 | 238 |
| 18 | 3300050508 | nmdc:mga09592_105407_c1 | nmdc:mga09592_105407_c1_147_917 | 238 |
| 19 | 3300005544 | Ga0070686_100042300 | Ga0070686_1000423002 | 239 |
| 20 | 3300053119 | Ga0500595_031251 | Ga0500595_031251_531_1343 | 239 |
| 21 | 3300031548 | Ga0307408_100018257 | Ga0307408_1000182572 | 241 |
| 22 | 3300031731 | Ga0307405_10000210 | Ga0307405_1000021022 | 241 |
| 23 | 3300031852 | Ga0307410_10014498 | Ga0307410_100144985 | 241 |
| 24 | 3300031901 | Ga0307406_10114687 | Ga0307406_101146872 | 241 |
| 25 | 3300031903 | Ga0307407_10006012 | Ga0307407_100060125 | 241 |
| 26 | 3300031995 | Ga0307409_100003498 | Ga0307409_1000034982 | 241 |
| 27 | 3300032005 | Ga0307411_10062923 | Ga0307411_100629232 | 241 |
| 28 | 3300031251 | Ga0265327_10039099 | Ga0265327_100390992 | 242 |
| 29 | 3300037853 | Ga0436364_0209735 | Ga0436364_0209735_771_1511 | 243 |
| 30 | 3300025912 | Ga0207707_10036655 | Ga0207707_100366553 | 245 |
| 31 | 3300031995 | Ga0307409_100030374 | Ga0307409_1000303744 | 245 |
| 32 | 3300032004 | Ga0307414_10593005 | Ga0307414_105930052 | 245 |
| 33 | 3300032126 | Ga0307415_100308968 | Ga0307415_1003089682 | 245 |
| 34 | 3300041413 | Ga0439465_0103876 | Ga0439465_0103876_148_933 | 246 |
| 35 | 3300031548 | Ga0307408_100563639 | Ga0307408_1005636392 | 247 |
| 36 | 3300013307 | Ga0157372_10011624 | Ga0157372_100116245 | 250 |
| 37 | 3300005336 | Ga0070680_100292016 | Ga0070680_1002920162 | 251 |
| 38 | 3300009093 | Ga0105240_10006284 | Ga0105240_100062849 | 251 |
| 39 | 3300013104 | Ga0157370_10034986 | Ga0157370_100349865 | 251 |
| 40 | 3300025913 | Ga0207695_10005662 | Ga0207695_1000566210 | 251 |
| 41 | 3300047320 | Ga0495672_0072105 | Ga0495672_0072105_889_1644 | 251 |
| 42 | 3300050492 | nmdc:mga0yw44_197074_c1 | nmdc:mga0yw44_197074_c1_396_1166 | 251 |
| 43 | 3300003320 | rootH2_10299236 | rootH2_102992362 | 252 |
| 44 | 3300003323 | rootH1_10000940 | rootH1_1000094053 | 252 |
| 45 | 3300003323 | rootH1_10324992 | rootH1_103249922 | 252 |
| 46 | 3300005289 | Ga0065704_10005040 | Ga0065704_100050404 | 252 |
| 47 | 3300005331 | Ga0070670_100601070 | Ga0070670_1006010702 | 252 |
| 48 | 3300005444 | Ga0070694_100666452 | Ga0070694_1006664521 | 252 |
| 49 | 3300005471 | Ga0070698_100298773 | Ga0070698_1002987731 | 252 |
| 50 | 3300005530 | Ga0070679_100576943 | Ga0070679_1005769431 | 252 |
| 51 | 3300005546 | Ga0070696_100370168 | Ga0070696_1003701682 | 252 |
| 52 | 3300005617 | Ga0068859_100238189 | Ga0068859_1002381892 | 252 |
| 53 | 3300005844 | Ga0068862_100377525 | Ga0068862_1003775252 | 252 |
| 54 | 3300005983 | Ga0081540_1014467 | Ga0081540_10144674 | 252 |
| 55 | 3300006844 | Ga0075428_100138481 | Ga0075428_1001384812 | 252 |
| 56 | 3300006844 | Ga0075428_100171244 | Ga0075428_1001712441 | 252 |
| 57 | 3300006846 | Ga0075430_100234435 | Ga0075430_1002344352 | 252 |
| 58 | 3300006880 | Ga0075429_100165518 | Ga0075429_1001655181 | 252 |
| 59 | 3300006931 | Ga0097620_100238191 | Ga0097620_1002381912 | 252 |
| 60 | 3300006948 | Ga0099826_10105108 | Ga0099826_101051082 | 252 |
| 61 | 3300009093 | Ga0105240_11103819 | Ga0105240_111038191 | 252 |
| 62 | 3300009094 | Ga0111539_10041363 | Ga0111539_100413633 | 252 |
| 63 | 3300009147 | Ga0114129_10018382 | Ga0114129_100183829 | 252 |
| 64 | 3300009147 | Ga0114129_10733788 | Ga0114129_107337882 | 252 |
| 65 | 3300009545 | Ga0105237_10001614 | Ga0105237_100016149 | 252 |
| 66 | 3300009551 | Ga0105238_10147266 | Ga0105238_101472661 | 252 |
| 67 | 3300010375 | Ga0105239_10000255 | Ga0105239_1000025511 | 252 |
| 68 | 3300021377 | Ga0213874_10006382 | Ga0213874_100063823 | 252 |
| 69 | 3300025914 | Ga0207671_10004675 | Ga0207671_100046755 | 252 |
| 70 | 3300025924 | Ga0207694_10448436 | Ga0207694_104484362 | 252 |
| 71 | 3300028380 | Ga0268265_10208741 | Ga0268265_102087412 | 252 |
| 72 | 3300031824 | Ga0307413_10080228 | Ga0307413_100802282 | 252 |
| 73 | 3300032005 | Ga0307411_10042415 | Ga0307411_100424152 | 252 |
| 74 | 3300035695 | Ga0373927_0078630 | Ga0373927_0078630_1363_2121 | 252 |
| 75 | 3300037312 | Ga0395899_0002461 | Ga0395899_0002461_4778_5536 | 252 |
| 76 | 3300037312 | Ga0395899_0015153 | Ga0395899_0015153_3395_4159 | 252 |
| 77 | 3300037418 | Ga0395900_0003049 | Ga0395900_0003049_10118_10882 | 252 |
| 78 | 3300037418 | Ga0395900_0003417 | Ga0395900_0003417_144_902 | 252 |
| 79 | 3300037466 | Ga0395898_0004370 | Ga0395898_0004370_9829_10587 | 252 |
| 80 | 3300038443 | Ga0395901_0108163 | Ga0395901_0108163_1296_2054 | 252 |
| 81 | 3300038443 | Ga0395901_0191803 | Ga0395901_0191803_326_1090 | 252 |
| 82 | 3300039450 | Ga0436363_0064898 | Ga0436363_0064898_341_1120 | 252 |
| 83 | 3300042876 | Ga0451577_0003690 | Ga0451577_0003690_11323_12081 | 252 |
| 84 | 3300045051 | Ga0451576_0000015 | Ga0451576_0000015_295520_296287 | 252 |
| 85 | 3300048913 | Ga0496110_0482375 | Ga0496110_0482375_14_787 | 252 |
| 86 | 3300049570 | Ga0501033_0000081 | Ga0501033_0000081_44913_45677 | 252 |
| 87 | 3300049649 | Ga0501198_009084 | Ga0501198_009084_78_848 | 252 |
| 88 | 3300049822 | Ga0501035_0006726 | Ga0501035_0006726_738_1502 | 252 |
| 89 | 3300050507 | nmdc:mga05p37_770405_c1 | nmdc:mga05p37_770405_c1_114_872 | 252 |
| 90 | 3300050508 | nmdc:mga09592_267817_c1 | nmdc:mga09592_267817_c1_614_1372 | 252 |
| 91 | 3300050508 | nmdc:mga09592_603207_c1 | nmdc:mga09592_603207_c1_14_772 | 252 |
| 92 | 3300050510 | nmdc:mga06r32_819306_c1 | nmdc:mga06r32_819306_c1_68_826 | 252 |
| 93 | 3300002773 | JGI25152J39213_1003215 | JGI25152J39213_10032152 | 253 |
| 94 | 3300002773 | JGI25152J39213_1003219 | JGI25152J39213_10032192 | 253 |
| 95 | 3300002774 | JGI25150J39212_1001241 | JGI25150J39212_10012414 | 253 |
| 96 | 3300003215 | JGI25153J46596_10000398 | JGI25153J46596_100003982 | 253 |
| 97 | 3300003354 | JGI25160J50197_1004662 | JGI25160J50197_10046624 | 253 |
| 98 | 3300003771 | Ga0055526_1000267 | Ga0055526_100026725 | 253 |
| 99 | 3300003775 | Ga0055524_1000124 | Ga0055524_100012462 | 253 |
| 100 | 3300003775 | Ga0055524_1000432 | Ga0055524_100043221 | 253 |
| 101 | 3300003790 | Ga0055528_1000428 | Ga0055528_100042824 | 253 |
| 102 | 3300005329 | Ga0070683_100029637 | Ga0070683_1000296372 | 253 |
| 103 | 3300005334 | Ga0068869_100084313 | Ga0068869_1000843132 | 253 |
| 104 | 3300005337 | Ga0070682_100242687 | Ga0070682_1002426872 | 253 |
| 105 | 3300005338 | Ga0068868_100045999 | Ga0068868_1000459992 | 253 |
| 106 | 3300005434 | Ga0070709_10091127 | Ga0070709_100911272 | 253 |
| 107 | 3300005435 | Ga0070714_100139409 | Ga0070714_1001394092 | 253 |
| 108 | 3300005436 | Ga0070713_100112767 | Ga0070713_1001127672 | 253 |
| 109 | 3300005437 | Ga0070710_10087292 | Ga0070710_100872922 | 253 |
| 110 | 3300005439 | Ga0070711_100162700 | Ga0070711_1001627002 | 253 |
| 111 | 3300005440 | Ga0070705_100077149 | Ga0070705_1000771491 | 253 |
| 112 | 3300005444 | Ga0070694_100210901 | Ga0070694_1002109012 | 253 |
| 113 | 3300005466 | Ga0070685_10314784 | Ga0070685_103147842 | 253 |
| 114 | 3300005530 | Ga0070679_100174907 | Ga0070679_1001749073 | 253 |
| 115 | 3300005535 | Ga0070684_100058830 | Ga0070684_1000588303 | 253 |
| 116 | 3300005535 | Ga0070684_100113355 | Ga0070684_1001133551 | 253 |
| 117 | 3300005546 | Ga0070696_100375059 | Ga0070696_1003750592 | 253 |
| 118 | 3300005548 | Ga0070665_100025150 | Ga0070665_1000251503 | 253 |
| 119 | 3300005564 | Ga0070664_100079966 | Ga0070664_1000799662 | 253 |
| 120 | 3300005616 | Ga0068852_100288957 | Ga0068852_1002889572 | 253 |
| 121 | 3300005617 | Ga0068859_100101288 | Ga0068859_1001012883 | 253 |
| 122 | 3300005841 | Ga0068863_100085076 | Ga0068863_1000850762 | 253 |
| 123 | 3300006175 | Ga0070712_100235484 | Ga0070712_1002354842 | 253 |
| 124 | 3300006846 | Ga0075430_100181921 | Ga0075430_1001819212 | 253 |
| 125 | 3300006931 | Ga0097620_100101286 | Ga0097620_1001012863 | 253 |
| 126 | 3300009093 | Ga0105240_10004889 | Ga0105240_1000488920 | 253 |
| 127 | 3300013102 | Ga0157371_10017870 | Ga0157371_100178702 | 253 |
| 128 | 3300013306 | Ga0163162_10013557 | Ga0163162_100135577 | 253 |
| 129 | 3300013307 | Ga0157372_10014670 | Ga0157372_100146702 | 253 |
| 130 | 3300025245 | Ga0207425_1000653 | Ga0207425_10006536 | 253 |
| 131 | 3300025258 | Ga0209129_1000259 | Ga0209129_100025910 | 253 |
| 132 | 3300025258 | Ga0209129_1001386 | Ga0209129_10013864 | 253 |
| 133 | 3300025273 | Ga0209673_1001056 | Ga0209673_100105610 | 253 |
| 134 | 3300025284 | Ga0209130_1003716 | Ga0209130_10037162 | 253 |
| 135 | 3300025294 | Ga0209025_1014166 | Ga0209025_10141662 | 253 |
| 136 | 3300025295 | Ga0209564_1000488 | Ga0209564_100048835 | 253 |
| 137 | 3300025295 | Ga0209564_1006775 | Ga0209564_10067755 | 253 |
| 138 | 3300025297 | Ga0209758_1000151 | Ga0209758_100015199 | 253 |
| 139 | 3300025297 | Ga0209758_1007445 | Ga0209758_10074454 | 253 |
| 140 | 3300025299 | Ga0209256_1000268 | Ga0209256_100026821 | 253 |
| 141 | 3300025299 | Ga0209256_1000901 | Ga0209256_100090116 | 253 |
| 142 | 3300025302 | Ga0207426_1000828 | Ga0207426_100082821 | 253 |
| 143 | 3300025303 | Ga0209051_1010021 | Ga0209051_10100213 | 253 |
| 144 | 3300025304 | Ga0209257_1019152 | Ga0209257_10191522 | 253 |
| 145 | 3300025898 | Ga0207692_10113962 | Ga0207692_101139622 | 253 |
| 146 | 3300025906 | Ga0207699_10038912 | Ga0207699_100389123 | 253 |
| 147 | 3300025913 | Ga0207695_10025545 | Ga0207695_100255454 | 253 |
| 148 | 3300025916 | Ga0207663_10111630 | Ga0207663_101116302 | 253 |
| 149 | 3300025928 | Ga0207700_10404684 | Ga0207700_104046842 | 253 |
| 150 | 3300025929 | Ga0207664_10222946 | Ga0207664_102229462 | 253 |
| 151 | 3300025933 | Ga0207706_10040759 | Ga0207706_100407592 | 253 |
| 152 | 3300025939 | Ga0207665_10368348 | Ga0207665_103683481 | 253 |
| 153 | 3300025972 | Ga0207668_10132101 | Ga0207668_101321012 | 253 |
| 154 | 3300026142 | Ga0207698_10326287 | Ga0207698_103262872 | 253 |
| 155 | 3300031507 | Ga0307509_10155706 | Ga0307509_101557063 | 253 |
| 156 | 3300032002 | Ga0307416_100160784 | Ga0307416_1001607842 | 253 |
| 157 | 3300032126 | Ga0307415_100809174 | Ga0307415_1008091741 | 253 |
| 158 | 3300041491 | Ga0451833_0386971 | Ga0451833_0386971_9088_9873 | 253 |
| 159 | 3300041492 | Ga0451835_0378827 | Ga0451835_0378827_10991_11776 | 253 |
| 160 | 3300041494 | Ga0451837_1060924 | Ga0451837_1060924_292_1077 | 253 |
| 161 | 3300041501 | Ga0451845_0872255 | Ga0451845_0872255_748_1593 | 253 |
| 162 | 3300041505 | Ga0451849_0092877 | Ga0451849_0092877_11351_12136 | 253 |
| 163 | 3300041511 | Ga0451855_0510998 | Ga0451855_0510998_20792_21577 | 253 |
| 164 | 3300041512 | Ga0451853_1342497 | Ga0451853_1342497_20231_21016 | 253 |
| 165 | 3300042876 | Ga0451577_0000172 | Ga0451577_0000172_34980_35765 | 253 |
| 166 | 3300044712 | Ga0453684_0000544 | Ga0453684_0000544_34980_35765 | 253 |
| 167 | 3300044712 | Ga0453684_0036540 | Ga0453684_0036540_971_1738 | 253 |
| 168 | 3300044712 | Ga0453684_0243390 | Ga0453684_0243390_1180_1941 | 253 |
| 169 | 3300045051 | Ga0451576_0114122 | Ga0451576_0114122_1700_2476 | 253 |
| 170 | 3300045051 | Ga0451576_0128988 | Ga0451576_0128988_137_898 | 253 |
| 171 | 3300045051 | Ga0451576_0320765 | Ga0451576_0320765_599_1360 | 253 |
| 172 | 3300047320 | Ga0495672_0001091 | Ga0495672_0001091_10707_11468 | 253 |
| 173 | 3300048909 | Ga0496106_0065055 | Ga0496106_0065055_543_1328 | 253 |
| 174 | 3300049571 | Ga0501034_0052812 | Ga0501034_0052812_1172_1933 | 253 |
| 175 | 3300049581 | Ga0501047_0134476 | Ga0501047_0134476_727_1500 | 253 |
| 176 | 3300049742 | Ga0501080_0341054 | Ga0501080_0341054_223_996 | 253 |
| 177 | 3300053088 | Ga0500644_0195575 | Ga0500644_0195575_22_807 | 253 |
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 3tdn-assembly1.cif.gz_A | computationally designed two-fold symmetric tim-barrel protein, flr | 0.9577 | 122 | 228 |
| 3tdm-assembly2.cif.gz_C | computationally designed tim-barrel protein, halfflr | 0.9539 | 122 | 223 |
| 4evz-assembly1.cif.gz_A | structure of hisf-luca | 0.9373 | 1 | 229 |
| 5abt-assembly1.cif.gz_A | s.enterica hisa mutant d7n, g102a, v106m, d176a | 0.9312 | 6 | 228 |
| 5a5w-assembly1.cif.gz_A | crystal structure of salmonella enterica hisa d7n d176a with profar | 0.9301 | 6 | 228 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| 3tdnA00 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; | 0.9577 | 122 | 228 | 3.40.50.12600 |
| af_P60664_1_258_3.20.20.70 | Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I | 0.9448 | 1 | 227 | 3.20.20.70 |
| af_P10371_1_245_3.20.20.70 | Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I | 0.9252 | 6 | 228 | 3.20.20.70 |
| af_Q57854_1_272_3.20.20.70 | Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I | 0.9234 | 1 | 229 | 3.20.20.70 |
| af_Q58927_1_237_3.20.20.70 | Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I | 0.9229 | 4 | 228 | 3.20.20.70 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A6J7ZTI9-F1-model_v4 | imidazole glycerol-phosphate synthase (EC 4.3.2.10) (IGP synthase cyclase subunit) | 0.9896 | 1 | 228 |
GO:0000105
GO:0000107 GO:0016833 |
| AF-A0A2V6ZD24-F1-model_v4 | imidazole glycerol-phosphate synthase (EC 4.3.2.10) (IGP synthase cyclase subunit) | 0.9856 | 1 | 207 |
GO:0000105
GO:0000107 GO:0016829 |
| AF-A0A351Q150-F1-model_v4 | deleted | 0.9841 | 1 | 223 |
|
| AF-A0A1G1NW56-F1-model_v4 | imidazole glycerol-phosphate synthase (EC 4.3.2.10) (IGP synthase cyclase subunit) | 0.9839 | 1 | 228 |
GO:0000105
GO:0000107 GO:0016829 |
| AF-A0A4Q3NEE3-F1-model_v4 | imidazole glycerol-phosphate synthase (EC 4.3.2.10) (IGP synthase cyclase subunit) | 0.9832 | 1 | 229 |
GO:0000105
GO:0000107 GO:0016829 |
Predicted Structure (AlphaFold2)
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