F270602

General Info

Members Datasets Scaffolds Average Seq Length
177 133 175 478

Family's Representative Sequence

Representative Sequence 3300038443|Ga0395901_0020398|Ga0395901_0020398_4449_5987
Length 512
Sequence MPRSGQHAGEGGKGQPVSFRHHLAHPWSPAGTPVLVVGDSMLDVYVLGAVDRISPEAPVPVVRQQDIRETAGGAANVAVNIVGLGGNAHLVACVGADHEGQRLASVLMGASVTCDLIPTPAKPTTVKTRFATGQHQLLRLDREDASPIAPDREDAILAAVARRIEGCRVVVMSDYNKGMLTDRVLAGVISLGRARGVPVIVDPKRRDFGAYRGATYLKPNRAELHHATGLPVASDADIERAGAVAAAATEASILVTRSEAGMSLVQPDGTAHHMPTHAQRVYDVTGAGDTVIAAFALGLASHRTVDEAMAFANLAGGIAVSKPGTAIVQGDELEAERSLLADDEVVPKGGLVNAETAARLRRIWKRQGLVVGFTNGCFDLIHPGHVSLLQGAAQACDRLIVGLNNDASVRRLKGPTRPVQDEEARAAVLGAIGHVNLVVLFEEDTPVSLIEQLQPDLLVKGADYTIDQIVGADIVQKAGGRVMTVELVPGQSTTRLIESGSSVARGTGKVRA

Samples

Sample ID Description Type Environment
1 2883291878 Hypericibacter terrae R5913 Isolate Rhizosphere
2 2883354860 Hypericibacter adhaerens R5959 Isolate Rhizosphere
3 3300001904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 Metagenome Rhizosphere
4 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
5 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
6 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
7 3300002075 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4 Metagenome Rhizosphere
8 3300002987 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB Metagenome Endosphere
9 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
10 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
11 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
12 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
13 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
14 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
15 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
16 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
17 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
18 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
19 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
20 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
21 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
22 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
23 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
24 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
25 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
26 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
27 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
28 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
29 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
30 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
31 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
32 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
33 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
34 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
35 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
36 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
37 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
38 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
39 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
40 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
41 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
42 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
43 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
44 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
45 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
46 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
47 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
48 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
49 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
50 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
51 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
52 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
53 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
54 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
55 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
83 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
85 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
86 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
87 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
88 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
89 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
90 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
91 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
92 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
93 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
94 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
95 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
96 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
97 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
98 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
99 3300042012 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z062817_5213 Metagenome Rhizosphere
100 3300042157 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 Metagenome Rhizosphere
101 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
102 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
103 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
104 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
105 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
106 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
107 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
108 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
109 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
110 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
111 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
112 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
113 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
114 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
115 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
116 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
117 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
118 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
119 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
120 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
121 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
122 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
123 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
124 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
125 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
126 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
127 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
128 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
129 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
130 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
131 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
132 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
133 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.87
Metatranscriptomes 0
Isolates 1.13

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 9.04
Nodule 0
Rhizoplane 2.82
Rhizosphere 80.79
Stem 0
Stem Tuber 0
Unclassified 7.34

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24736J21556_1003046 3300001904 Bacteria 2929
2 JGI24739J22299_10000031 3300001989 Bacteria 38713
3 JGI24739J22299_10001098 3300001989 Bacteria 10088
4 JGI24737J22298_10004473 3300001990 Bacteria 4868
5 JGI24737J22298_10006125 3300001990 Bacteria 4120
6 JGI24735J21928_10000328 3300002067 Bacteria 16528
7 JGI24735J21928_10004795 3300002067 Bacteria 4515
8 JGI24738J21930_10000583 3300002075 Bacteria 10465
9 JGI25159J45721_1002373 3300002987 Bacteria 7180
10 JGI25165J46597_1000100 3300003214 Bacteria 157712
11 rootH2_10156931 3300003320 Bacteria 4757
12 rootL2_10035570 3300003322 Bacteria 11728
13 rootL2_10043401 3300003322 Bacteria 4626
14 rootH1_10055391 3300003323 Bacteria 5587
15 Ga0070658_10000201 3300005327 Bacteria 52606
16 Ga0070658_10002105 3300005327 Bacteria 16697
17 Ga0070658_10005944 3300005327 Bacteria 9903
18 Ga0070658_10016473 3300005327 Bacteria 5916
19 Ga0070658_10124377 3300005327 Bacteria 2146
20 Ga0068869_100000105 3300005334 Bacteria 39634
21 Ga0070680_100064076 3300005336 Unclassified 3012
22 Ga0068868_100000003 3300005338 Bacteria 155611
23 Ga0070660_100000024 3300005339 Bacteria 94300
24 Ga0070660_100000125 3300005339 Bacteria 48665
25 Ga0070661_100035012 3300005344 Unclassified 3644
26 Ga0070675_100018099 3300005354 Bacteria 5607
27 Ga0070671_100046077 3300005355 Bacteria 3626
28 Ga0070663_100001707 3300005455 Bacteria 12196
29 Ga0070663_100003007 3300005455 Bacteria 9625
30 Ga0070681_10072298 3300005458 Unclassified 3412
31 Ga0068867_100000003 3300005459 Bacteria 217886
32 Ga0068853_100034560 3300005539 Bacteria 4292
33 Ga0068855_100000213 3300005563 Bacteria 73664
34 Ga0068855_100009225 3300005563 Bacteria 11919
35 Ga0068855_100046791 3300005563 Bacteria 5113
36 Ga0068855_100237096 3300005563 Bacteria 2040
37 Ga0068854_100000562 3300005578 Bacteria 22293
38 Ga0068856_100000729 3300005614 Bacteria 35627
39 Ga0068856_100001312 3300005614 Bacteria 26167
40 Ga0068856_100004537 3300005614 Bacteria 13806
41 Ga0070702_100022784 3300005615 Unclassified 3318
42 Ga0068852_100000301 3300005616 Bacteria 33216
43 Ga0081455_10005493 3300005937 Bacteria 13894
44 Ga0075368_10004933 3300006042 Bacteria 4553
45 Ga0097621_100016012 3300006237 Bacteria 5655
46 Ga0068871_100012507 3300006358 Bacteria 6261
47 Ga0068865_100000002 3300006881 Bacteria 285745
48 Ga0105240_10001585 3300009093 Bacteria 38598
49 Ga0105240_10009050 3300009093 Bacteria 14139
50 Ga0105240_10012310 3300009093 Bacteria 11820
51 Ga0105240_10016484 3300009093 Bacteria 10002
52 Ga0105240_10030928 3300009093 Bacteria 6953
53 Ga0105240_10238037 3300009093 Bacteria 2112
54 Ga0105245_10000060 3300009098 Bacteria 119425
55 Ga0105243_10000031 3300009148 Bacteria 185825
56 Ga0105241_10090048 3300009174 Bacteria 2419
57 Ga0105237_10020508 3300009545 Bacteria 6811
58 Ga0105238_10007124 3300009551 Bacteria 11188
59 Ga0105238_10011925 3300009551 Bacteria 8758
60 Ga0105239_10006757 3300010375 Bacteria 13248
61 Ga0105239_10024922 3300010375 Bacteria 6589
62 Ga0105239_10221389 3300010375 Bacteria 2122
63 Ga0157370_10000157 3300013104 Bacteria 84292
64 Ga0157374_10000105 3300013296 Bacteria 78376
65 Ga0157374_10022385 3300013296 Bacteria 5638
66 Ga0157378_10000787 3300013297 Bacteria 29458
67 Ga0157372_10015413 3300013307 Bacteria 8192
68 Ga0157375_10005817 3300013308 Bacteria 10730
69 Ga0157376_10000107 3300014969 Bacteria 59840
70 Ga0213872_10000815 3300021361 Bacteria 22580
71 Ga0207427_100496 3300025231 Bacteria 21012
72 Ga0209026_1001938 3300025250 Bacteria 8352
73 Ga0209148_1000112 3300025254 Bacteria 197101
74 Ga0209148_1000889 3300025254 Bacteria 20382
75 Ga0209233_1000143 3300025261 Bacteria 191568
76 Ga0209130_1000512 3300025284 Bacteria 39134
77 Ga0207426_1000181 3300025302 Bacteria 158308
78 Ga0207692_10029396 3300025898 Bacteria 2611
79 Ga0207647_10000203 3300025904 Bacteria 48448
80 Ga0207647_10000401 3300025904 Bacteria 35481
81 Ga0207647_10014307 3300025904 Bacteria 5473
82 Ga0207645_10005929 3300025907 Bacteria 8804
83 Ga0207705_10000014 3300025909 Bacteria 434286
84 Ga0207705_10000117 3300025909 Bacteria 88666
85 Ga0207707_10175448 3300025912 Bacteria 1872
86 Ga0207695_10007283 3300025913 Bacteria 14131
87 Ga0207695_10010286 3300025913 Bacteria 11457
88 Ga0207695_10039496 3300025913 Bacteria 5073
89 Ga0207671_10068178 3300025914 Bacteria 2650
90 Ga0207663_10045552 3300025916 Bacteria 2699
91 Ga0207660_10030963 3300025917 Unclassified 3681
92 Ga0207657_10000145 3300025919 Bacteria 72001
93 Ga0207657_10000351 3300025919 Bacteria 48962
94 Ga0207657_10142039 3300025919 Bacteria 1961
95 Ga0207694_10009444 3300025924 Bacteria 7352
96 Ga0207687_10064257 3300025927 Bacteria 2602
97 Ga0207644_10033545 3300025931 Bacteria 3588
98 Ga0207706_10012197 3300025933 Bacteria 7832
99 Ga0207686_10002208 3300025934 Bacteria 10713
100 Ga0207709_10000122 3300025935 Bacteria 116068
101 Ga0207704_10000003 3300025938 Bacteria 285808
102 Ga0207689_10000135 3300025942 Bacteria 62838
103 Ga0207667_10000007 3300025949 Bacteria 630590
104 Ga0207667_10035615 3300025949 Bacteria 5339
105 Ga0207667_10056210 3300025949 Bacteria 4135
106 Ga0207651_10000003 3300025960 Bacteria 308050
107 Ga0207640_10000106 3300025981 Bacteria 63751
108 Ga0207677_10000233 3300026023 Bacteria 43366
109 Ga0207678_10001286 3300026067 Bacteria 23196
110 Ga0207678_10008642 3300026067 Bacteria 8976
111 Ga0207702_10000460 3300026078 Bacteria 46054
112 Ga0207702_10001201 3300026078 Bacteria 26292
113 Ga0207702_10004259 3300026078 Bacteria 12772
114 Ga0207702_10075508 3300026078 Bacteria 2912
115 Ga0207648_10000007 3300026089 Bacteria 217865
116 Ga0207674_10029020 3300026116 Bacteria 5831
117 Ga0207698_10000368 3300026142 Bacteria 26451
118 Ga0209813_10002081 3300027866 Bacteria 4553
119 Ga0268266_10033373 3300028379 Bacteria 4375
120 Ga0265340_10061709 3300031247 Bacteria 1792
121 Ga0265339_10061046 3300031249 Bacteria 2030
122 Ga0265331_10014375 3300031250 Bacteria 4218
123 Ga0265316_10098468 3300031344 Bacteria 2225
124 Ga0265313_10000361 3300031595 Bacteria 49331
125 Ga0265313_10011525 3300031595 Bacteria 5487
126 Ga0265314_10039868 3300031711 Bacteria 3378
127 Ga0265342_10011367 3300031712 Bacteria 6100
128 Ga0395899_0001996 3300037312 Bacteria 16799
129 Ga0395900_0089511 3300037418 Bacteria 3164
130 Ga0395905_0011239 3300037471 Bacteria 8655
131 Ga0395905_0029423 3300037471 Bacteria 5175
132 Ga0395901_0020398 3300038443 Bacteria 6784
133 Ga0395901_0077143 3300038443 Bacteria 3478
134 Ga0436365_1703724 3300039437 Bacteria 2736
135 Ga0436361_0554723 3300039447 Bacteria 2860
136 Ga0436361_1211654 3300039447 Bacteria 25502
137 Ga0436363_0858948 3300039450 Unclassified 1767
138 Ga0439448_0002472 3300042005 Bacteria 5037
139 Ga0439455_0000469 3300042012 Bacteria 5552
140 Ga0439458_0000712 3300042157 Bacteria 8584
141 Ga0466972_0006357 3300044658 Bacteria 5936
142 Ga0466966_0006812 3300044684 Bacteria 7571
143 Ga0466961_0028229 3300044693 Bacteria 3608
144 Ga0466964_0062831 3300044706 Bacteria 1549
145 Ga0466970_0094824 3300044765 Bacteria 1622
146 Ga0496103_0025967 3300048906 Unclassified 3543
147 Ga0496106_0120235 3300048909 Bacteria 2053
148 Ga0496107_0000470 3300048910 Bacteria 22130
149 Ga0496112_0084246 3300048915 Bacteria 3144
150 Ga0496114_0050029 3300048917 Unclassified 3478
151 Ga0496117_0051681 3300048920 Bacteria 2903
152 Ga0496119_0031874 3300048922 Bacteria 3523
153 Ga0496120_0016172 3300048923 Bacteria 4884
154 Ga0496121_0026549 3300048924 Bacteria 5451
155 Ga0496123_0022901 3300048926 Bacteria 4798
156 Ga0496126_0007549 3300048929 Bacteria 11898
157 Ga0501034_0004456 3300049571 Bacteria 15570
158 Ga0501034_0053438 3300049571 Bacteria 4067
159 Ga0501047_0192794 3300049581 Bacteria 1901
160 Ga0501067_0022348 3300049583 Bacteria 3501
161 Ga0501070_0081894 3300049586 Bacteria 2671
162 Ga0501072_0011130 3300049588 Bacteria 6866
163 Ga0501073_0001510 3300049589 Bacteria 17222
164 Ga0501073_0029311 3300049589 Bacteria 3933
165 Ga0501074_0065919 3300049590 Unclassified 2605
166 Ga0501080_0025142 3300049742 Bacteria 5527
167 Ga0501083_0053797 3300049744 Bacteria 2702
168 nmdc:mga06z11_44985_c1 3300050494 Bacteria 2230
169 nmdc:mga04h51_7508_c1 3300050495 Bacteria 2881
170 Ga0500643_000248 3300053087 Bacteria 49637
171 Ga0500595_019796 3300053119 Bacteria 2436
172 Ga0500642_0023521 3300053130 Bacteria 2475
173 Ga0500616_0036371 3300053153 Bacteria 2672
174 Ga0501082_0092081 3300060353 Bacteria 2618
175 Ga0466962_0035590 3300061719 Bacteria 2383

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300009093 Ga0105240_10016484 Ga0105240_100164842 409
2 3300025913 Ga0207695_10039496 Ga0207695_100394963 409
3 3300028379 Ga0268266_10033373 Ga0268266_100333732 409
4 3300049590 Ga0501074_0065919 Ga0501074_0065919_1239_2594 414
5 3300031247 Ga0265340_10061709 Ga0265340_100617092 423
6 3300031595 Ga0265313_10011525 Ga0265313_100115252 423
7 3300031249 Ga0265339_10061046 Ga0265339_100610462 426
8 3300005327 Ga0070658_10016473 Ga0070658_100164736 436
9 3300009093 Ga0105240_10012310 Ga0105240_1001231011 436
10 3300026078 Ga0207702_10075508 Ga0207702_100755082 436
11 3300053119 Ga0500595_019796 Ga0500595_019796_632_2083 438
12 3300009093 Ga0105240_10238037 Ga0105240_102380372 444
13 3300005937 Ga0081455_10005493 Ga0081455_100054932 445
14 3300049583 Ga0501067_0022348 Ga0501067_0022348_667_2121 445
15 3300049588 Ga0501072_0011130 Ga0501072_0011130_1381_2835 445
16 3300049589 Ga0501073_0001510 Ga0501073_0001510_50_1492 445
17 3300060353 Ga0501082_0092081 Ga0501082_0092081_182_1636 445
18 3300005563 Ga0068855_100237096 Ga0068855_1002370962 446
19 3300025949 Ga0207667_10056210 Ga0207667_100562101 446
20 3300025919 Ga0207657_10142039 Ga0207657_101420392 451
21 3300039437 Ga0436365_1703724 Ga0436365_1703724_849_2321 452
22 3300048915 Ga0496112_0084246 Ga0496112_0084246_915_2387 453
23 3300009093 Ga0105240_10009050 Ga0105240_100090508 456
24 3300010375 Ga0105239_10221389 Ga0105239_102213892 456
25 3300025913 Ga0207695_10007283 Ga0207695_100072836 456
26 3300003320 rootH2_10156931 rootH2_101569317 461
27 3300005327 Ga0070658_10124377 Ga0070658_101243772 463
28 3300031712 Ga0265342_10011367 Ga0265342_100113673 464
29 3300005563 Ga0068855_100009225 Ga0068855_10000922511 467
30 3300009093 Ga0105240_10030928 Ga0105240_100309284 467
31 3300009174 Ga0105241_10090048 Ga0105241_100900483 467
32 3300009545 Ga0105237_10020508 Ga0105237_100205086 467
33 3300009551 Ga0105238_10011925 Ga0105238_1001192511 467
34 3300025913 Ga0207695_10010286 Ga0207695_100102868 467
35 3300025914 Ga0207671_10068178 Ga0207671_100681781 467
36 3300025949 Ga0207667_10035615 Ga0207667_100356155 467
37 3300049581 Ga0501047_0192794 Ga0501047_0192794_359_1822 467
38 3300010375 Ga0105239_10024922 Ga0105239_100249224 469
39 3300005614 Ga0068856_100001312 Ga0068856_10000131214 470
40 3300026078 Ga0207702_10001201 Ga0207702_100012016 470
41 3300031344 Ga0265316_10098468 Ga0265316_100984682 470
42 3300037418 Ga0395900_0089511 Ga0395900_0089511_183_1634 470
43 3300038443 Ga0395901_0077143 Ga0395901_0077143_1339_2790 470
44 3300039450 Ga0436363_0858948 Ga0436363_0858948_215_1717 470
45 3300031250 Ga0265331_10014375 Ga0265331_100143752 472
46 3300031595 Ga0265313_10000361 Ga0265313_1000036118 472
47 3300031711 Ga0265314_10039868 Ga0265314_100398683 472
48 3300044693 Ga0466961_0028229 Ga0466961_0028229_330_1778 473
49 3300005563 Ga0068855_100046791 Ga0068855_1000467912 474
50 3300048920 Ga0496117_0051681 Ga0496117_0051681_412_1863 474
51 3300053153 Ga0500616_0036371 Ga0500616_0036371_183_1625 474
52 3300005455 Ga0070663_100001707 Ga0070663_1000017077 475
53 3300005578 Ga0068854_100000562 Ga0068854_1000005625 475
54 3300010375 Ga0105239_10006757 Ga0105239_100067576 475
55 3300026067 Ga0207678_10001286 Ga0207678_100012869 475
56 3300037471 Ga0395905_0011239 Ga0395905_0011239_5160_6617 475
57 3300048924 Ga0496121_0026549 Ga0496121_0026549_13_1467 475
58 3300048926 Ga0496123_0022901 Ga0496123_0022901_614_2068 475
59 3300049586 Ga0501070_0081894 Ga0501070_0081894_38_1477 476
60 3300049589 Ga0501073_0029311 Ga0501073_0029311_456_1895 476
61 3300005563 Ga0068855_100000213 Ga0068855_10000021354 477
62 3300025949 Ga0207667_10000007 Ga0207667_10000007102 477
63 3300044765 Ga0466970_0094824 Ga0466970_0094824_13_1467 477
64 3300006042 Ga0075368_10004933 Ga0075368_100049333 478
65 3300025254 Ga0209148_1000112 Ga0209148_100011258 478
66 3300027866 Ga0209813_10002081 Ga0209813_100020811 478
67 3300050494 nmdc:mga06z11_44985_c1 nmdc:mga06z11_44985_c1_681_2120 478
68 3300050495 nmdc:mga04h51_7508_c1 nmdc:mga04h51_7508_c1_1369_2808 478
69 3300003214 JGI25165J46597_1000100 JGI25165J46597_100010022 479
70 3300005614 Ga0068856_100004537 Ga0068856_1000045378 479
71 3300009093 Ga0105240_10001585 Ga0105240_1000158520 479
72 3300025231 Ga0207427_100496 Ga0207427_1004968 479
73 3300025250 Ga0209026_1001938 Ga0209026_10019384 479
74 3300025254 Ga0209148_1000889 Ga0209148_10008893 479
75 3300025261 Ga0209233_1000143 Ga0209233_100014321 479
76 3300026078 Ga0207702_10004259 Ga0207702_100042598 479
77 3300037312 Ga0395899_0001996 Ga0395899_0001996_10034_11494 479
78 3300048929 Ga0496126_0007549 Ga0496126_0007549_3826_5265 479
79 3300001990 JGI24737J22298_10004473 JGI24737J22298_100044732 480
80 3300013307 Ga0157372_10015413 Ga0157372_100154136 480
81 3300025912 Ga0207707_10175448 Ga0207707_101754481 480
82 3300053130 Ga0500642_0023521 Ga0500642_0023521_974_2437 480
83 3300013104 Ga0157370_10000157 Ga0157370_1000015741 482
84 3300044706 Ga0466964_0062831 Ga0466964_0062831_17_1465 482
85 3300005327 Ga0070658_10000201 Ga0070658_1000020124 483
86 3300005339 Ga0070660_100000125 Ga0070660_1000001257 483
87 3300005355 Ga0070671_100046077 Ga0070671_1000460771 483
88 3300025909 Ga0207705_10000117 Ga0207705_1000011711 483
89 3300025919 Ga0207657_10000145 Ga0207657_1000014557 483
90 3300025931 Ga0207644_10033545 Ga0207644_100335452 483
91 3300044658 Ga0466972_0006357 Ga0466972_0006357_3332_4783 483
92 3300049571 Ga0501034_0004456 Ga0501034_0004456_6621_8135 483
93 3300049571 Ga0501034_0053438 Ga0501034_0053438_1919_3433 483
94 3300049742 Ga0501080_0025142 Ga0501080_0025142_256_1737 483
95 3300049744 Ga0501083_0053797 Ga0501083_0053797_80_1561 483
96 iso_pu_bacteria 2883291878 2883294105 483
97 iso_pu_bacteria 2883354860 2883357355 483
98 3300001989 JGI24739J22299_10001098 JGI24739J22299_100010988 484
99 3300001990 JGI24737J22298_10006125 JGI24737J22298_100061253 484
100 3300002067 JGI24735J21928_10000328 JGI24735J21928_100003283 484
101 3300002075 JGI24738J21930_10000583 JGI24738J21930_100005835 484
102 3300003322 rootL2_10043401 rootL2_100434014 484
103 3300005327 Ga0070658_10005944 Ga0070658_100059447 484
104 3300005339 Ga0070660_100000024 Ga0070660_10000002439 484
105 3300009551 Ga0105238_10007124 Ga0105238_100071248 484
106 3300021361 Ga0213872_10000815 Ga0213872_1000081512 484
107 3300025904 Ga0207647_10000203 Ga0207647_100002032 484
108 3300025919 Ga0207657_10000351 Ga0207657_1000035119 484
109 3300025924 Ga0207694_10009444 Ga0207694_100094443 484
110 3300025933 Ga0207706_10012197 Ga0207706_100121975 484
111 3300039447 Ga0436361_0554723 Ga0436361_0554723_1307_2794 484
112 3300039447 Ga0436361_1211654 Ga0436361_1211654_14318_15796 484
113 3300042012 Ga0439455_0000469 Ga0439455_0000469_3789_5243 484
114 3300042157 Ga0439458_0000712 Ga0439458_0000712_4334_5788 484
115 3300053087 Ga0500643_000248 Ga0500643_000248_36276_37751 484
116 3300005539 Ga0068853_100034560 Ga0068853_1000345602 485
117 3300006237 Ga0097621_100016012 Ga0097621_1000160122 485
118 3300006358 Ga0068871_100012507 Ga0068871_1000125072 485
119 3300013296 Ga0157374_10022385 Ga0157374_100223853 485
120 3300025981 Ga0207640_10000106 Ga0207640_1000010642 485
121 3300003323 rootH1_10055391 rootH1_100553913 486
122 3300005327 Ga0070658_10002105 Ga0070658_100021056 486
123 3300005334 Ga0068869_100000105 Ga0068869_10000010518 486
124 3300005336 Ga0070680_100064076 Ga0070680_1000640761 486
125 3300005338 Ga0068868_100000003 Ga0068868_10000000336 486
126 3300005344 Ga0070661_100035012 Ga0070661_1000350124 486
127 3300005354 Ga0070675_100018099 Ga0070675_1000180995 486
128 3300005455 Ga0070663_100003007 Ga0070663_1000030074 486
129 3300005458 Ga0070681_10072298 Ga0070681_100722981 486
130 3300005459 Ga0068867_100000003 Ga0068867_100000003152 486
131 3300005615 Ga0070702_100022784 Ga0070702_1000227844 486
132 3300006881 Ga0068865_100000002 Ga0068865_100000002107 486
133 3300009098 Ga0105245_10000060 Ga0105245_1000006088 486
134 3300009148 Ga0105243_10000031 Ga0105243_10000031151 486
135 3300013296 Ga0157374_10000105 Ga0157374_1000010561 486
136 3300013297 Ga0157378_10000787 Ga0157378_1000078714 486
137 3300013308 Ga0157375_10005817 Ga0157375_100058176 486
138 3300014969 Ga0157376_10000107 Ga0157376_1000010715 486
139 3300025904 Ga0207647_10014307 Ga0207647_100143074 486
140 3300025907 Ga0207645_10005929 Ga0207645_100059292 486
141 3300025909 Ga0207705_10000014 Ga0207705_10000014178 486
142 3300025917 Ga0207660_10030963 Ga0207660_100309631 486
143 3300025927 Ga0207687_10064257 Ga0207687_100642572 486
144 3300025934 Ga0207686_10002208 Ga0207686_100022084 486
145 3300025935 Ga0207709_10000122 Ga0207709_1000012214 486
146 3300025938 Ga0207704_10000003 Ga0207704_10000003151 486
147 3300025942 Ga0207689_10000135 Ga0207689_100001357 486
148 3300025960 Ga0207651_10000003 Ga0207651_10000003151 486
149 3300026023 Ga0207677_10000233 Ga0207677_1000023316 486
150 3300026067 Ga0207678_10008642 Ga0207678_100086427 486
151 3300026089 Ga0207648_10000007 Ga0207648_1000000741 486
152 3300026116 Ga0207674_10029020 Ga0207674_100290202 486
153 3300044684 Ga0466966_0006812 Ga0466966_0006812_5135_6640 486
154 3300048906 Ga0496103_0025967 Ga0496103_0025967_346_1815 486
155 3300048909 Ga0496106_0120235 Ga0496106_0120235_419_1888 486
156 3300048910 Ga0496107_0000470 Ga0496107_0000470_10588_12057 486
157 3300048917 Ga0496114_0050029 Ga0496114_0050029_678_2147 486
158 3300061719 Ga0466962_0035590 Ga0466962_0035590_487_1953 488
159 3300025898 Ga0207692_10029396 Ga0207692_100293962 491
160 3300038443 Ga0395901_0020398 Ga0395901_0020398_4449_5987 491
161 3300048922 Ga0496119_0031874 Ga0496119_0031874_566_2041 491
162 3300048923 Ga0496120_0016172 Ga0496120_0016172_262_1737 491
163 3300001904 JGI24736J21556_1003046 JGI24736J21556_10030463 493
164 3300001989 JGI24739J22299_10000031 JGI24739J22299_100000315 493
165 3300002067 JGI24735J21928_10004795 JGI24735J21928_100047952 493
166 3300002987 JGI25159J45721_1002373 JGI25159J45721_10023736 493
167 3300003322 rootL2_10035570 rootL2_100355706 493
168 3300005614 Ga0068856_100000729 Ga0068856_10000072921 493
169 3300005616 Ga0068852_100000301 Ga0068852_1000003018 493
170 3300025284 Ga0209130_1000512 Ga0209130_100051225 493
171 3300025302 Ga0207426_1000181 Ga0207426_100018154 493
172 3300025904 Ga0207647_10000401 Ga0207647_100004015 493
173 3300025916 Ga0207663_10045552 Ga0207663_100455522 493
174 3300026078 Ga0207702_10000460 Ga0207702_100004604 493
175 3300026142 Ga0207698_10000368 Ga0207698_1000036816 493
176 3300037471 Ga0395905_0029423 Ga0395905_0029423_124_1605 493
177 3300042005 Ga0439448_0002472 Ga0439448_0002472_2842_4323 493

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00294

PfkB

pfkB family carbohydrate kinase

32

330

0.89

PF01467

CTP_transf_like

Cytidylyltransferase-like

373

502

0.88

Structural Annotation

Top 5 Hits

ID Description Score Start End
4e84-assembly1.cif.gz_A crystal structure of burkholderia cenocepacia hlda 0.9444 5 314
5xf2-assembly1.cif.gz_A crystal structure of semet-hldc from burkholderia pseudomallei 0.9124 332 469
4e84-assembly1.cif.gz_A crystal structure of burkholderia cenocepacia hlda 0.9124 5 314
7vtf-assembly1.cif.gz_A cytidine bound structure of pseudouridine kinase (puki) from escherichia coli strain b 0.881 11 308
7w93-assembly1.cif.gz_A-2 crystal structure of e.coli pseudouridine kinase psuk complexed with n1-methyl-pseudouridine 0.8804 10 308
ID Description Score Start End Superfamily
af_P76658_320_476_3.40.50.620 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.9599 332 483 3.40.50.620
af_P76658_320_476_3.40.50.620 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.9245 332 483 3.40.50.620
af_P76658_2_309_3.40.1190.20 Alpha Beta;3-Layer(aba) Sandwich;UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase;Ribokinase 0.9131 7 314 3.40.1190.20
af_P76658_2_309_3.40.1190.20 Alpha Beta;3-Layer(aba) Sandwich;UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase;Ribokinase 0.8935 7 314 3.40.1190.20
1cozA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.8802 351 480 3.40.50.620
ID Description Score Start End GO Terms
AF-A0A3D5UB32-F1-model_v4 Bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase 0.9913 332 439 GO:0009058
GO:0016301
AF-A0A3D5R541-F1-model_v4 Cytidyltransferase-like domain-containing protein 0.9855 332 460 GO:0003824
GO:0009058
AF-A0A6G3UGW6-F1-model_v4 Adenylyltransferase/cytidyltransferase family protein 0.9803 346 445 GO:0009058
GO:0016779
AF-A0A382B6P7-F1-model_v4 Cytidyltransferase-like domain-containing protein 0.9796 332 446 GO:0003824
GO:0009058
AF-A0A7C3V3C2-F1-model_v4 Cytidyltransferase-like domain-containing protein 0.9778 332 427 GO:0003824
GO:0009058

Feature Viewer

pLDDT pTM Quality
87.44 0.68 Medium
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Predicted Structure (AlphaFold2)

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