F270565

General Info

Members Datasets Scaffolds Average Seq Length
177 94 177 205

Family's Representative Sequence

Representative Sequence 3300036647|Ga0316582_0266236|Ga0316582_0266236_126_842
Length 238
Sequence MTLWDTLNEENRAYHPFNPLTIFRNSMALETEVVRAIDESALHRAVAVLESGGLVAFPTDTVYGVAALPWNVGAVMRLYVAKQRPAGLPIPLLLSDADQLGRVATLAPACAPLTERFWPGGLTLVLPKTEAVPDVVSPGPTVAVRVPNLPLARDLIRGAGGVLAVTSANISGQPSPVTATEAEEQLSGRIDLIVDGGPCPGGVPSSLLDCTASPPRLLRRGAISEESLRAVVGPILST

Samples

Sample ID Description Type Environment
1 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
2 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
3 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
4 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
5 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
6 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
7 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
8 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
9 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
10 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
11 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
12 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
13 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
14 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
15 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
16 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
17 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
18 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
19 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
20 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
21 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
22 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
23 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
24 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
25 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
26 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
27 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
28 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
29 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
30 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300027614 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co S AM (SPAdes) (version 2) Metagenome Rhizosphere
32 3300027695 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Rhizosphere soil Co-N PM (SPAdes) (version 2) Metagenome Rhizosphere
33 3300027717 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Endophyte Co-N S PM (SPAdes) (version 2) Metagenome Rhizosphere
34 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
35 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
36 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
37 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
38 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
39 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
40 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
41 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
42 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
43 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
44 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
45 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
46 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
47 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
48 3300037588 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA Metagenome Rhizosphere
49 3300038725 Seagrass microbial communities from Seahorse Key, FL, USA - HV0818 Metagenome Unclassified
50 3300038726 Seagrass microbial communities from Seahorse Key, FL, USA - TH0319 Metagenome Unclassified
51 3300039093 Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 Metagenome Unclassified
52 3300042122 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926D_E14_082716_2496 Metagenome Rhizosphere
53 3300042123 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0117W_E14_082716_2228 Metagenome Rhizosphere
54 3300042124 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627W_E14_082716_2423 Metagenome Rhizosphere
55 3300042147 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627W_E14_080116_2618 Metagenome Rhizosphere
56 3300042461 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612LE14Z071817_5366 Metagenome Rhizosphere
57 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
58 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
59 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
60 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
61 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
62 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
63 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
64 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
65 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
66 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
67 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
68 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
69 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
70 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
71 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
72 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
73 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
74 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
75 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
76 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
77 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
78 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
79 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
80 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
81 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
82 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
83 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
84 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
85 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
86 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
87 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
88 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
89 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
90 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
91 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
92 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
93 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
94 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0
Rhizosphere 98.31
Stem 0
Stem Tuber 0
Unclassified 1.69

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 SwRhRL2b_contig_1663168 2162886007 Bacteria 3828
2 SwRhRL2b_contig_977633 2162886007 Bacteria 4705
3 Ga0065704_10000291 3300005289 Bacteria 52676
4 Ga0065707_10000435 3300005295 Bacteria 91033
5 Ga0065707_10089173 3300005295 Bacteria 4436
6 Ga0065707_10117930 3300005295 Bacteria 2199
7 Ga0065707_10183774 3300005295 Bacteria 1401
8 Ga0070703_10118814 3300005406 Bacteria 956
9 Ga0070705_100013319 3300005440 Bacteria 4202
10 Ga0070694_100227726 3300005444 Bacteria 1401
11 Ga0070706_100236711 3300005467 Bacteria 1705
12 Ga0070706_100525645 3300005467 Bacteria 1101
13 Ga0070707_100062557 3300005468 Bacteria 3571
14 Ga0070707_100162829 3300005468 Bacteria 2174
15 Ga0070707_100369902 3300005468 Bacteria 1393
16 Ga0070698_100019681 3300005471 Bacteria 7080
17 Ga0070698_100092825 3300005471 Bacteria 2999
18 Ga0070698_100192202 3300005471 Bacteria 1978
19 Ga0070698_100375684 3300005471 Bacteria 1354
20 Ga0070698_100619711 3300005471 Bacteria 1023
21 Ga0070699_100119481 3300005518 Bacteria 2317
22 Ga0070699_100354685 3300005518 Bacteria 1322
23 Ga0070699_100481379 3300005518 Bacteria 1126
24 Ga0070696_100430492 3300005546 Bacteria 1038
25 Ga0070704_100319805 3300005549 Bacteria 1300
26 Ga0068857_100453699 3300005577 Bacteria 1199
27 Ga0070702_100167583 3300005615 Bacteria 1426
28 Ga0068859_100094148 3300005617 Bacteria 3048
29 Ga0068859_100150138 3300005617 Bacteria 2406
30 Ga0068860_100212000 3300005843 Bacteria 1879
31 Ga0075428_100295887 3300006844 Unclassified 1741
32 Ga0075431_100055751 3300006847 Bacteria 4077
33 Ga0075434_100834279 3300006871 Unclassified 938
34 Ga0075429_100009092 3300006880 Bacteria 8627
35 Ga0075436_100371317 3300006914 Bacteria 1033
36 Ga0097620_100094145 3300006931 Bacteria 3048
37 Ga0097620_100150137 3300006931 Bacteria 2406
38 Ga0111539_10050523 3300009094 Bacteria 4954
39 Ga0114129_10002449 3300009147 Bacteria 25777
40 Ga0114129_10021327 3300009147 Bacteria 9198
41 Ga0114129_10144207 3300009147 Unclassified 3263
42 Ga0114129_10258419 3300009147 Bacteria 2336
43 Ga0105241_10488562 3300009174 Unclassified 1096
44 Ga0105249_10181026 3300009553 Bacteria 2051
45 Ga0105239_10253221 3300010375 Bacteria 1978
46 Ga0207684_10578432 3300025910 Bacteria 960
47 Ga0207646_10024842 3300025922 Bacteria 5484
48 Ga0207646_10168788 3300025922 Bacteria 1976
49 Ga0207646_10432919 3300025922 Bacteria 1187
50 Ga0207708_10075264 3300026075 Bacteria 2588
51 Ga0209970_1016235 3300027614 Bacteria 1242
52 Ga0209966_1018040 3300027695 Bacteria 1349
53 Ga0209998_10000122 3300027717 Bacteria 30448
54 Ga0209998_10111457 3300027717 Unclassified 684
55 Ga0209974_10000307 3300027876 Bacteria 15920
56 Ga0268264_10306598 3300028381 Bacteria 1496
57 Ga0316579_10011935 3300031691 Bacteria 3707
58 Ga0316579_10119359 3300031691 Bacteria 1267
59 Ga0316579_10132077 3300031691 Bacteria 1203
60 Ga0316576_10053240 3300031727 Bacteria 2949
61 Ga0316578_10001432 3300031728 Bacteria 9670
62 Ga0316578_10103695 3300031728 Bacteria 1706
63 Ga0316578_10116142 3300031728 Bacteria 1608
64 Ga0307405_10454044 3300031731 Bacteria 1017
65 Ga0316577_10012139 3300031733 Bacteria 4686
66 Ga0316577_10026574 3300031733 Bacteria 3224
67 Ga0316577_10100904 3300031733 Bacteria 1618
68 Ga0316577_10104107 3300031733 Bacteria 1592
69 Ga0316577_10224589 3300031733 Bacteria 1062
70 Ga0316577_10352500 3300031733 Bacteria 835
71 Ga0307413_10462214 3300031824 Bacteria 1010
72 Ga0307409_100767072 3300031995 Unclassified 969
73 Ga0307409_100835742 3300031995 Bacteria 931
74 Ga0307416_100176224 3300032002 Bacteria 1998
75 Ga0307411_10530523 3300032005 Bacteria 1001
76 Ga0316585_10023159 3300032137 Bacteria 1915
77 Ga0316582_0025989 3300036647 Bacteria 3521
78 Ga0316582_0026836 3300036647 Bacteria 3471
79 Ga0316582_0266236 3300036647 Bacteria 1176
80 Ga0316582_0714754 3300036647 Bacteria 688
81 Ga0316584_0055280 3300036712 Bacteria 2972
82 Ga0316584_0083020 3300036712 Bacteria 2400
83 Ga0316581_0001452 3300037588 Bacteria 5337
84 Ga0400484_42551 3300038725 Bacteria 2093
85 Ga0400490_15434 3300038726 Bacteria 2627
86 Ga0400489_15243 3300039093 Bacteria 6508
87 Ga0450920_057437 3300042122 Bacteria 784
88 Ga0450921_013074 3300042123 Bacteria 726
89 Ga0450922_005895 3300042124 Bacteria 1138
90 Ga0450910_004059 3300042147 Bacteria 1968
91 Ga0439460_0102728 3300042461 Bacteria 920
92 Ga0451577_0158183 3300042876 Bacteria 2040
93 Ga0451577_0333886 3300042876 Unclassified 1375
94 Ga0453684_0059005 3300044712 Bacteria 4952
95 Ga0453684_0192903 3300044712 Bacteria 2382
96 Ga0453684_0257738 3300044712 Unclassified 1999
97 Ga0451576_0045829 3300045051 Bacteria 4603
98 Ga0501031_0024519 3300049568 Bacteria 3931
99 Ga0501034_0098572 3300049571 Bacteria 2918
100 Ga0501034_0638701 3300049571 Bacteria 967
101 Ga0501036_0111264 3300049572 Bacteria 2314
102 Ga0501036_0485144 3300049572 Bacteria 1029
103 Ga0501037_0058336 3300049573 Bacteria 2817
104 Ga0501038_0396643 3300049574 Bacteria 1068
105 Ga0501039_0016185 3300049575 Bacteria 5713
106 Ga0501039_0026201 3300049575 Bacteria 4481
107 Ga0501039_0083015 3300049575 Bacteria 2495
108 Ga0501040_0002530 3300049576 Bacteria 11787
109 Ga0501040_0010422 3300049576 Bacteria 6078
110 Ga0501040_0224103 3300049576 Bacteria 1338
111 Ga0501041_0052845 3300049577 Bacteria 2477
112 Ga0501041_0066429 3300049577 Bacteria 2210
113 Ga0501042_0030635 3300049578 Bacteria 3801
114 Ga0501042_0045954 3300049578 Bacteria 3112
115 Ga0501043_0260983 3300049579 Bacteria 1332
116 Ga0501046_0020387 3300049580 Bacteria 5484
117 Ga0501046_0047270 3300049580 Bacteria 3412
118 Ga0501046_0051630 3300049580 Bacteria 3244
119 Ga0501048_0043907 3300049582 Bacteria 3198
120 Ga0501048_0244880 3300049582 Bacteria 1272
121 Ga0501048_0267941 3300049582 Bacteria 1214
122 Ga0501068_0073477 3300049584 Bacteria 2089
123 Ga0501068_0318143 3300049584 Bacteria 997
124 Ga0501068_0318475 3300049584 Unclassified 997
125 Ga0501069_0138893 3300049585 Bacteria 1393
126 Ga0501071_0000753 3300049587 Bacteria 17137
127 Ga0501071_0039354 3300049587 Bacteria 3382
128 Ga0501071_0046836 3300049587 Bacteria 3106
129 Ga0501071_0452973 3300049587 Bacteria 982
130 Ga0501072_0002400 3300049588 Bacteria 14045
131 Ga0501072_0025809 3300049588 Bacteria 4578
132 Ga0501073_0389168 3300049589 Bacteria 963
133 Ga0501074_0052899 3300049590 Bacteria 2930
134 Ga0501074_0161247 3300049590 Bacteria 1602
135 Ga0501075_0002185 3300049591 Bacteria 12939
136 Ga0501075_0021073 3300049591 Bacteria 4750
137 Ga0501075_0040130 3300049591 Bacteria 3504
138 Ga0501075_0170706 3300049591 Bacteria 1660
139 Ga0501075_0244897 3300049591 Bacteria 1367
140 Ga0501075_0671073 3300049591 Bacteria 790
141 Ga0501076_0020693 3300049592 Bacteria 5038
142 Ga0501076_0093170 3300049592 Bacteria 2424
143 Ga0501077_0013422 3300049593 Bacteria 5137
144 Ga0501077_0023166 3300049593 Bacteria 3937
145 Ga0501077_0026565 3300049593 Bacteria 3674
146 Ga0501079_0013031 3300049741 Bacteria 6342
147 Ga0501079_0087940 3300049741 Bacteria 2405
148 Ga0501079_0120173 3300049741 Bacteria 2043
149 Ga0501080_0040214 3300049742 Bacteria 4362
150 Ga0501080_0355907 3300049742 Bacteria 1321
151 Ga0501080_0711140 3300049742 Unclassified 886
152 Ga0501081_0004105 3300049743 Bacteria 9330
153 Ga0501081_0195598 3300049743 Bacteria 1465
154 Ga0501081_0230059 3300049743 Bacteria 1350
155 Ga0501035_0042774 3300049822 Bacteria 4085
156 Ga0501035_0070072 3300049822 Bacteria 3107
157 Ga0501044_0643569 3300049823 Bacteria 950
158 Ga0501045_0009195 3300049824 Bacteria 6905
159 Ga0501045_0010422 3300049824 Bacteria 6507
160 Ga0501045_0033432 3300049824 Bacteria 3729
161 nmdc:mga05p37_29498_c1 3300050507 Bacteria 6694
162 nmdc:mga05p37_49647_c1 3300050507 Bacteria 5161
163 nmdc:mga05p37_745292_c1 3300050507 Unclassified 1080
164 nmdc:mga05p37_837_c1 3300050507 Bacteria 34486
165 nmdc:mga05p37_99885_c1 3300050507 Bacteria 3573
166 nmdc:mga09592_27934_c1 3300050508 Bacteria 4684
167 nmdc:mga06r32_349239_c1 3300050510 Unclassified 1464
168 nmdc:mga08y16_453212_c1 3300050511 Bacteria 1308
169 nmdc:mga0a205_663061_c1 3300050515 Bacteria 894
170 Ga0501084_0014937 3300054114 Bacteria 6438
171 Ga0501084_0050768 3300054114 Bacteria 3470
172 Ga0501084_0213615 3300054114 Bacteria 1627
173 Ga0501084_0369280 3300054114 Bacteria 1212
174 Ga0501082_0011125 3300060353 Bacteria 7737
175 Ga0530510_0014100 3300061734 Bacteria 5635
176 Ga0530510_0105681 3300061734 Bacteria 2060
177 Ga0530510_0490496 3300061734 Bacteria 931

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300042123 Ga0450921_013074 Ga0450921_013074_44_574 170
2 3300042147 Ga0450910_004059 Ga0450910_004059_47_577 170
3 3300005295 Ga0065707_10183774 Ga0065707_101837741 179
4 3300050507 nmdc:mga05p37_29498_c1 nmdc:mga05p37_29498_c1_15_554 179
5 3300049742 Ga0501080_0040214 Ga0501080_0040214_150_716 182
6 3300032137 Ga0316585_10023159 Ga0316585_100231592 189
7 3300037588 Ga0316581_0001452 Ga0316581_0001452_802_1425 189
8 3300031728 Ga0316578_10116142 Ga0316578_101161422 191
9 3300031731 Ga0307405_10454044 Ga0307405_104540442 191
10 3300031824 Ga0307413_10462214 Ga0307413_104622142 191
11 3300031995 Ga0307409_100835742 Ga0307409_1008357422 191
12 3300032005 Ga0307411_10530523 Ga0307411_105305232 191
13 3300005467 Ga0070706_100525645 Ga0070706_1005256451 192
14 3300005468 Ga0070707_100369902 Ga0070707_1003699021 192
15 3300005471 Ga0070698_100192202 Ga0070698_1001922023 192
16 3300005471 Ga0070698_100619711 Ga0070698_1006197112 192
17 3300005518 Ga0070699_100354685 Ga0070699_1003546851 192
18 3300025910 Ga0207684_10578432 Ga0207684_105784321 192
19 3300049572 Ga0501036_0485144 Ga0501036_0485144_128_727 192
20 3300049576 Ga0501040_0224103 Ga0501040_0224103_76_675 192
21 3300049584 Ga0501068_0318143 Ga0501068_0318143_261_860 192
22 3300049587 Ga0501071_0452973 Ga0501071_0452973_99_698 192
23 3300049592 Ga0501076_0093170 Ga0501076_0093170_1578_2177 192
24 3300049593 Ga0501077_0026565 Ga0501077_0026565_682_1281 192
25 3300049741 Ga0501079_0120173 Ga0501079_0120173_916_1515 192
26 3300049743 Ga0501081_0195598 Ga0501081_0195598_522_1121 192
27 3300054114 Ga0501084_0014937 Ga0501084_0014937_784_1383 192
28 3300049571 Ga0501034_0098572 Ga0501034_0098572_55_705 193
29 3300005444 Ga0070694_100227726 Ga0070694_1002277262 194
30 3300005617 Ga0068859_100094148 Ga0068859_1000941483 194
31 3300005843 Ga0068860_100212000 Ga0068860_1002120002 194
32 3300006931 Ga0097620_100094145 Ga0097620_1000941453 194
33 3300027614 Ga0209970_1016235 Ga0209970_10162353 194
34 3300027695 Ga0209966_1018040 Ga0209966_10180402 194
35 3300027717 Ga0209998_10000122 Ga0209998_1000012231 194
36 3300027717 Ga0209998_10111457 Ga0209998_101114571 194
37 3300027876 Ga0209974_10000307 Ga0209974_1000030720 194
38 3300028381 Ga0268264_10306598 Ga0268264_103065982 194
39 3300042124 Ga0450922_005895 Ga0450922_005895_291_893 194
40 3300049568 Ga0501031_0024519 Ga0501031_0024519_2197_2802 194
41 3300049575 Ga0501039_0083015 Ga0501039_0083015_1637_2242 194
42 3300049578 Ga0501042_0045954 Ga0501042_0045954_1955_2560 194
43 3300049580 Ga0501046_0047270 Ga0501046_0047270_1467_2168 194
44 3300049584 Ga0501068_0318475 Ga0501068_0318475_29_634 194
45 3300049588 Ga0501072_0002400 Ga0501072_0002400_11554_12159 194
46 3300049591 Ga0501075_0021073 Ga0501075_0021073_1648_2253 194
47 3300049742 Ga0501080_0711140 Ga0501080_0711140_35_640 194
48 3300049743 Ga0501081_0230059 Ga0501081_0230059_127_732 194
49 3300049824 Ga0501045_0010422 Ga0501045_0010422_1453_2058 194
50 3300054114 Ga0501084_0213615 Ga0501084_0213615_463_1068 194
51 3300005440 Ga0070705_100013319 Ga0070705_1000133195 195
52 3300005468 Ga0070707_100062557 Ga0070707_1000625574 195
53 3300005468 Ga0070707_100162829 Ga0070707_1001628293 195
54 3300005471 Ga0070698_100019681 Ga0070698_1000196815 195
55 3300005471 Ga0070698_100092825 Ga0070698_1000928251 195
56 3300005518 Ga0070699_100481379 Ga0070699_1004813792 195
57 3300005546 Ga0070696_100430492 Ga0070696_1004304922 195
58 3300005549 Ga0070704_100319805 Ga0070704_1003198052 195
59 3300006914 Ga0075436_100371317 Ga0075436_1003713171 195
60 3300025922 Ga0207646_10024842 Ga0207646_100248421 195
61 3300025922 Ga0207646_10168788 Ga0207646_101687881 195
62 3300025922 Ga0207646_10432919 Ga0207646_104329192 195
63 3300042122 Ga0450920_057437 Ga0450920_057437_124_729 195
64 3300042461 Ga0439460_0102728 Ga0439460_0102728_218_823 195
65 3300049572 Ga0501036_0111264 Ga0501036_0111264_555_1175 195
66 3300049573 Ga0501037_0058336 Ga0501037_0058336_2120_2734 195
67 3300049574 Ga0501038_0396643 Ga0501038_0396643_421_1035 195
68 3300049575 Ga0501039_0016185 Ga0501039_0016185_1918_2532 195
69 3300049575 Ga0501039_0026201 Ga0501039_0026201_1596_2216 195
70 3300049576 Ga0501040_0002530 Ga0501040_0002530_6577_7191 195
71 3300049576 Ga0501040_0010422 Ga0501040_0010422_1998_2618 195
72 3300049577 Ga0501041_0052845 Ga0501041_0052845_1371_1985 195
73 3300049577 Ga0501041_0066429 Ga0501041_0066429_308_928 195
74 3300049578 Ga0501042_0030635 Ga0501042_0030635_928_1548 195
75 3300049579 Ga0501043_0260983 Ga0501043_0260983_372_992 195
76 3300049580 Ga0501046_0020387 Ga0501046_0020387_4837_5451 195
77 3300049580 Ga0501046_0051630 Ga0501046_0051630_1733_2353 195
78 3300049582 Ga0501048_0043907 Ga0501048_0043907_216_836 195
79 3300049582 Ga0501048_0244880 Ga0501048_0244880_197_811 195
80 3300049582 Ga0501048_0267941 Ga0501048_0267941_479_1084 195
81 3300049584 Ga0501068_0073477 Ga0501068_0073477_61_666 195
82 3300049585 Ga0501069_0138893 Ga0501069_0138893_433_1038 195
83 3300049587 Ga0501071_0000753 Ga0501071_0000753_11984_12598 195
84 3300049587 Ga0501071_0039354 Ga0501071_0039354_815_1435 195
85 3300049587 Ga0501071_0046836 Ga0501071_0046836_844_1458 195
86 3300049588 Ga0501072_0025809 Ga0501072_0025809_1594_2214 195
87 3300049589 Ga0501073_0389168 Ga0501073_0389168_144_764 195
88 3300049590 Ga0501074_0052899 Ga0501074_0052899_1348_1968 195
89 3300049590 Ga0501074_0161247 Ga0501074_0161247_412_1017 195
90 3300049591 Ga0501075_0002185 Ga0501075_0002185_8025_8639 195
91 3300049591 Ga0501075_0040130 Ga0501075_0040130_937_1557 195
92 3300049591 Ga0501075_0170706 Ga0501075_0170706_354_968 195
93 3300049591 Ga0501075_0671073 Ga0501075_0671073_161_766 195
94 3300049592 Ga0501076_0020693 Ga0501076_0020693_3366_3986 195
95 3300049593 Ga0501077_0013422 Ga0501077_0013422_3133_3753 195
96 3300049593 Ga0501077_0023166 Ga0501077_0023166_759_1373 195
97 3300049741 Ga0501079_0013031 Ga0501079_0013031_4712_5332 195
98 3300049741 Ga0501079_0087940 Ga0501079_0087940_1722_2336 195
99 3300049742 Ga0501080_0355907 Ga0501080_0355907_38_658 195
100 3300049743 Ga0501081_0004105 Ga0501081_0004105_6175_6795 195
101 3300049822 Ga0501035_0042774 Ga0501035_0042774_3272_3886 195
102 3300049822 Ga0501035_0070072 Ga0501035_0070072_1596_2216 195
103 3300049823 Ga0501044_0643569 Ga0501044_0643569_234_848 195
104 3300049824 Ga0501045_0009195 Ga0501045_0009195_4874_5488 195
105 3300049824 Ga0501045_0033432 Ga0501045_0033432_1162_1782 195
106 3300054114 Ga0501084_0050768 Ga0501084_0050768_492_1112 195
107 3300054114 Ga0501084_0369280 Ga0501084_0369280_286_900 195
108 3300060353 Ga0501082_0011125 Ga0501082_0011125_6210_6830 195
109 3300061734 Ga0530510_0014100 Ga0530510_0014100_3329_3949 195
110 3300061734 Ga0530510_0105681 Ga0530510_0105681_895_1509 195
111 3300061734 Ga0530510_0490496 Ga0530510_0490496_243_848 195
112 3300009094 Ga0111539_10050523 Ga0111539_100505236 196
113 3300009147 Ga0114129_10021327 Ga0114129_100213273 196
114 3300050507 nmdc:mga05p37_99885_c1 nmdc:mga05p37_99885_c1_2158_2781 196
115 3300050511 nmdc:mga08y16_453212_c1 nmdc:mga08y16_453212_c1_234_857 196
116 3300044712 Ga0453684_0257738 Ga0453684_0257738_1186_1797 201
117 3300049571 Ga0501034_0638701 Ga0501034_0638701_270_911 202
118 3300031691 Ga0316579_10011935 Ga0316579_100119352 203
119 3300031727 Ga0316576_10053240 Ga0316576_100532403 203
120 3300031728 Ga0316578_10001432 Ga0316578_100014327 203
121 3300031733 Ga0316577_10012139 Ga0316577_100121392 203
122 3300031733 Ga0316577_10352500 Ga0316577_103525001 203
123 3300036647 Ga0316582_0025989 Ga0316582_0025989_317_949 203
124 3300036647 Ga0316582_0266236 Ga0316582_0266236_126_842 203
125 3300036647 Ga0316582_0714754 Ga0316582_0714754_38_670 203
126 3300036712 Ga0316584_0055280 Ga0316584_0055280_1886_2518 203
127 3300039093 Ga0400489_15243 Ga0400489_15243_5807_6466 203
128 3300042876 Ga0451577_0333886 Ga0451577_0333886_237_848 203
129 3300044712 Ga0453684_0059005 Ga0453684_0059005_3068_3679 203
130 2162886007 SwRhRL2b_contig_1663168 SwRhRL2b_0662.00000380 204
131 2162886007 SwRhRL2b_contig_977633 SwRhRL2b_0280.00006130 204
132 3300005289 Ga0065704_10000291 Ga0065704_1000029149 204
133 3300005295 Ga0065707_10000435 Ga0065707_1000043578 204
134 3300005295 Ga0065707_10089173 Ga0065707_100891734 204
135 3300005295 Ga0065707_10117930 Ga0065707_101179301 204
136 3300005406 Ga0070703_10118814 Ga0070703_101188141 204
137 3300005467 Ga0070706_100236711 Ga0070706_1002367112 204
138 3300005471 Ga0070698_100375684 Ga0070698_1003756841 204
139 3300005518 Ga0070699_100119481 Ga0070699_1001194812 204
140 3300005577 Ga0068857_100453699 Ga0068857_1004536992 204
141 3300005615 Ga0070702_100167583 Ga0070702_1001675832 204
142 3300005617 Ga0068859_100150138 Ga0068859_1001501382 204
143 3300006844 Ga0075428_100295887 Ga0075428_1002958872 204
144 3300006847 Ga0075431_100055751 Ga0075431_1000557514 204
145 3300006871 Ga0075434_100834279 Ga0075434_1008342791 204
146 3300006880 Ga0075429_100009092 Ga0075429_1000090927 204
147 3300006931 Ga0097620_100150137 Ga0097620_1001501372 204
148 3300009147 Ga0114129_10002449 Ga0114129_100024494 204
149 3300009147 Ga0114129_10144207 Ga0114129_101442072 204
150 3300009147 Ga0114129_10258419 Ga0114129_102584193 204
151 3300009174 Ga0105241_10488562 Ga0105241_104885622 204
152 3300009553 Ga0105249_10181026 Ga0105249_101810263 204
153 3300010375 Ga0105239_10253221 Ga0105239_102532213 204
154 3300026075 Ga0207708_10075264 Ga0207708_100752642 204
155 3300031691 Ga0316579_10119359 Ga0316579_101193592 204
156 3300031691 Ga0316579_10132077 Ga0316579_101320772 204
157 3300031728 Ga0316578_10103695 Ga0316578_101036952 204
158 3300031733 Ga0316577_10026574 Ga0316577_100265741 204
159 3300031733 Ga0316577_10100904 Ga0316577_101009041 204
160 3300031733 Ga0316577_10104107 Ga0316577_101041072 204
161 3300031733 Ga0316577_10224589 Ga0316577_102245892 204
162 3300031995 Ga0307409_100767072 Ga0307409_1007670721 204
163 3300032002 Ga0307416_100176224 Ga0307416_1001762242 204
164 3300036647 Ga0316582_0026836 Ga0316582_0026836_1157_1819 204
165 3300036712 Ga0316584_0083020 Ga0316584_0083020_1287_1949 204
166 3300038725 Ga0400484_42551 Ga0400484_42551_1058_1696 204
167 3300038726 Ga0400490_15434 Ga0400490_15434_1205_1834 204
168 3300042876 Ga0451577_0158183 Ga0451577_0158183_142_768 204
169 3300044712 Ga0453684_0192903 Ga0453684_0192903_1025_1645 204
170 3300045051 Ga0451576_0045829 Ga0451576_0045829_2325_2951 204
171 3300049591 Ga0501075_0244897 Ga0501075_0244897_71_697 204
172 3300050507 nmdc:mga05p37_49647_c1 nmdc:mga05p37_49647_c1_3100_3726 204
173 3300050507 nmdc:mga05p37_745292_c1 nmdc:mga05p37_745292_c1_192_806 204
174 3300050507 nmdc:mga05p37_837_c1 nmdc:mga05p37_837_c1_16589_17203 204
175 3300050508 nmdc:mga09592_27934_c1 nmdc:mga09592_27934_c1_1889_2503 204
176 3300050510 nmdc:mga06r32_349239_c1 nmdc:mga06r32_349239_c1_440_1060 204
177 3300050515 nmdc:mga0a205_663061_c1 nmdc:mga0a205_663061_c1_180_806 204

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01300

Sua5_yciO_yrdC

Telomere recombination

47

221

0.97

Structural Annotation

Top 5 Hits

ID Description Score Start End
6f89-assembly2.cif.gz_B structure of h234a/y235a p.abyssi sua5 0.9508 3 202
6f89-assembly1.cif.gz_A structure of h234a/y235a p.abyssi sua5 0.9413 3 202
6f87-assembly3.cif.gz_C crystal structure of p. abyssi sua5 complexed with l-threonine and ppi 0.9403 5 203
3aje-assembly1.cif.gz_A crystal structure of s. tokodaii sua5 complexed with l-threonine and amppnp 0.9292 1 203
6f89-assembly2.cif.gz_B structure of h234a/y235a p.abyssi sua5 0.9284 3 202
ID Description Score Start End Superfamily
af_P9WGC9_2_211_3.90.870.10 Alpha Beta;Alpha-Beta Complex;DHBP synthase;DHBP synthase 0.9392 4 203 3.90.870.10
af_Q2FWE2_20_236_3.90.870.10 Alpha Beta;Alpha-Beta Complex;DHBP synthase;DHBP synthase 0.9283 1 204 3.90.870.10
af_Q2FWE2_20_236_3.90.870.10 Alpha Beta;Alpha-Beta Complex;DHBP synthase;DHBP synthase 0.924 1 204 3.90.870.10
af_Q4DBQ8_3_214_3.90.870.10 Alpha Beta;Alpha-Beta Complex;DHBP synthase;DHBP synthase 0.9224 4 203 3.90.870.10
af_Q60369_7_206_3.90.870.10 Alpha Beta;Alpha-Beta Complex;DHBP synthase;DHBP synthase 0.9174 12 201 3.90.870.10
ID Description Score Start End GO Terms
AF-A0A850AUL6-F1-model_v4 deleted 0.9951 1 203
AF-A0A2M7GCP8-F1-model_v4 L-threonylcarbamoyladenylate synthase (EC 2.7.7.87) (L-threonylcarbamoyladenylate synthase) 0.9909 65 203 GO:0000049
GO:0003725
GO:0005737
GO:0006450
GO:0008033
GO:0016779
AF-A0A7C5JSZ4-F1-model_v4 L-threonylcarbamoyladenylate synthase (EC 2.7.7.87) (L-threonylcarbamoyladenylate synthase) 0.9889 32 203 GO:0000049
GO:0003725
GO:0005737
GO:0006450
GO:0008033
GO:0016779
AF-A0A1F8KHL4-F1-model_v4 L-threonylcarbamoyladenylate synthase (EC 2.7.7.87) (L-threonylcarbamoyladenylate synthase) 0.9822 1 203 GO:0000049
GO:0003725
GO:0005737
GO:0006450
GO:0008033
GO:0016779
AF-A0A533SS81-F1-model_v4 L-threonylcarbamoyladenylate synthase (EC 2.7.7.87) 0.9821 1 175 GO:0000049
GO:0003725
GO:0005737
GO:0006450
GO:0016779

Feature Viewer

pLDDT pTM Quality
95.03 0.91 High
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Predicted Structure (AlphaFold2)

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