F270499

General Info

Members Datasets Scaffolds Average Seq Length
177 144 354 245

Family's Representative Sequence

Representative Sequence 3300033179|Ga0307507_10083366|Ga0307507_100833662
Length 289
Sequence MRHNVAINVIGSSLAASYDRAVDRQSFREALLQIMERKIHWAWSRFTSGKVAKDRLHLHFEQEYATFVRDFPVMIGWAYVQCPIAEVRRDLAENLYEEETGGVIAGRPHPELFLEYPRGLGMDVGRFDDVELFPAARRFRALLDDYTQHRGWAQACAVTTIFLEGTNHERGELDPAAPRRPEPPLEHHPLVVHYGLPVDALALTKAHRRVAHHPRPCPGHRARRRGHRHGGHPRRLARLPRRGRGGLWRRALSTVLATGAGRARAAAKYLAPEARLVRLHRRCPSSRAT

Samples

Sample ID Description Type Environment
1 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
2 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
3 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
4 3300003911 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
5 3300005277 Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample Wild type Col-0 v2 (version 2) Metagenome Rhizosphere
6 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
7 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
8 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
9 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
10 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
11 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
12 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
13 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
14 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
15 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
16 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
17 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
18 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
19 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
20 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
21 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
22 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
23 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
24 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
25 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
26 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
27 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
28 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
29 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
30 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
31 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
32 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
33 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
34 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
35 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
36 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
37 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
38 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
39 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
40 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
41 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
42 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
43 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
44 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
45 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
46 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
65 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
66 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
67 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
68 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
69 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
70 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
71 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
72 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
73 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
74 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
75 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
76 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
77 3300035090 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_2 Metagenome Rhizosphere
78 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
79 3300035115 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_11 Metagenome Rhizosphere
80 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
81 3300035121 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_3 Metagenome Rhizosphere
82 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
83 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
84 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
85 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
86 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
87 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
88 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
89 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
90 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
91 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
92 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
93 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
94 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
95 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
96 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
97 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
98 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
99 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
100 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
101 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
102 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
103 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
104 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
105 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
106 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
107 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
108 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
109 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
110 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
111 3300049665 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H4_A_2_drought Metagenome Rhizosphere
112 3300049667 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G5_B_2_control Metagenome Rhizosphere
113 3300049669 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_B_2_drought Metagenome Rhizosphere
114 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
115 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
116 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
117 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
118 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
119 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
120 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
121 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
122 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
123 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
124 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
125 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
126 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
127 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
128 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
129 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
130 3300053091 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 endosphere Metagenome Endosphere
131 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
132 3300053102 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 endosphere Metagenome Endosphere
133 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
134 3300053121 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 endosphere Metagenome Endosphere
135 3300053123 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere Metagenome Endosphere
136 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
137 3300053146 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 endosphere Metagenome Endosphere
138 3300053150 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 endosphere Metagenome Endosphere
139 3300053162 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 endosphere Metagenome Endosphere
140 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
141 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
142 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
143 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
144 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 8.47
Nodule 0
Rhizoplane 0.56
Rhizosphere 86.44
Stem 0
Stem Tuber 0
Unclassified 10.17

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0307507_10083366 3300033179 Bacteria 2796
2 SwRhRL2b_contig_3513418 2162886007 Bacteria 1502
3 rootH1_10013676 3300003323 Bacteria 5000
4 JGI25405J52794_10005849 3300003911 Bacteria 2233
5 Ga0065716_1004006 3300005277 Unclassified 1085
6 Ga0065704_10104262 3300005289 Bacteria 2146
7 Ga0065707_10119890 3300005295 Bacteria 2147
8 Ga0070690_100170449 3300005330 Bacteria 1498
9 Ga0068869_100040919 3300005334 Bacteria 3316
10 Ga0068869_100619538 3300005334 Bacteria 916
11 Ga0070682_100278237 3300005337 Bacteria 1219
12 Ga0070691_10313863 3300005341 Bacteria 860
13 Ga0070667_100222262 3300005367 Bacteria 1681
14 Ga0070700_100112905 3300005441 Bacteria 1809
15 Ga0070694_100599532 3300005444 Bacteria 887
16 Ga0070681_10101086 3300005458 Bacteria 2829
17 Ga0070681_10524452 3300005458 Bacteria 1098
18 Ga0068867_100116375 3300005459 Bacteria 2060
19 Ga0070685_10067298 3300005466 Bacteria 2113
20 Ga0070698_100007495 3300005471 Bacteria 11806
21 Ga0070679_100014719 3300005530 Bacteria 7518
22 Ga0070697_100023962 3300005536 Unclassified 4857
23 Ga0068855_100103494 3300005563 Bacteria 3275
24 Ga0068857_100660880 3300005577 Bacteria 991
25 Ga0068856_100057408 3300005614 Bacteria 3843
26 Ga0070702_100163521 3300005615 Bacteria 1441
27 Ga0068864_100215870 3300005618 Unclassified 1768
28 Ga0068866_10155381 3300005718 Bacteria 1329
29 Ga0068863_101079595 3300005841 Bacteria 807
30 Ga0068860_100592052 3300005843 Bacteria 1114
31 Ga0081455_10002735 3300005937 Bacteria 20806
32 Ga0081455_10012516 3300005937 Bacteria 8463
33 Ga0081455_10025688 3300005937 Bacteria 5432
34 Ga0081455_10047500 3300005937 Bacteria 3717
35 Ga0075432_10013323 3300006058 Bacteria 2793
36 Ga0068871_100223782 3300006358 Bacteria 1631
37 Ga0075428_100295584 3300006844 Bacteria 1742
38 Ga0075430_100064785 3300006846 Bacteria 3070
39 Ga0075431_100057675 3300006847 Bacteria 4005
40 Ga0075434_100163710 3300006871 Unclassified 2244
41 Ga0075434_100747263 3300006871 Bacteria 995
42 Ga0075429_100138975 3300006880 Unclassified 2126
43 Ga0097620_100494092 3300006931 Bacteria 1319
44 Ga0075435_100255426 3300007076 Bacteria 1492
45 Ga0111539_10025874 3300009094 Bacteria 7184
46 Ga0105245_10000203 3300009098 Bacteria 56667
47 Ga0105245_10731282 3300009098 Bacteria 1024
48 Ga0114129_10244945 3300009147 Bacteria 2409
49 Ga0105237_10000006 3300009545 Bacteria 380316
50 Ga0105238_10224024 3300009551 Bacteria 1857
51 Ga0105239_10939771 3300010375 Bacteria 993
52 Ga0163163_10338639 3300014325 Bacteria 1559
53 Ga0207705_10005957 3300025909 Bacteria 9068
54 Ga0207705_10131903 3300025909 Bacteria 1860
55 Ga0207707_10565119 3300025912 Bacteria 965
56 Ga0207671_10001818 3300025914 Bacteria 23803
57 Ga0207652_10089612 3300025921 Bacteria 2701
58 Ga0207652_10230510 3300025921 Bacteria 1669
59 Ga0207687_10001086 3300025927 Bacteria 18472
60 Ga0207687_10344642 3300025927 Bacteria 1212
61 Ga0207689_10052298 3300025942 Bacteria 3366
62 Ga0207661_10506961 3300025944 Unclassified 1103
63 Ga0207667_10121941 3300025949 Bacteria 2686
64 Ga0207712_10057166 3300025961 Bacteria 2751
65 Ga0207712_10174342 3300025961 Bacteria 1684
66 Ga0207668_10191052 3300025972 Bacteria 1623
67 Ga0207658_10381155 3300025986 Bacteria 1235
68 Ga0207677_10525946 3300026023 Bacteria 1027
69 Ga0207708_10196244 3300026075 Bacteria 1609
70 Ga0207702_10476216 3300026078 Bacteria 1214
71 Ga0207674_10184731 3300026116 Bacteria 2036
72 Ga0207674_10835938 3300026116 Bacteria 888
73 Ga0207675_100040855 3300026118 Bacteria 4332
74 Ga0207683_10044350 3300026121 Bacteria 3888
75 Ga0207698_10603859 3300026142 Bacteria 1082
76 Ga0207428_10007705 3300027907 Bacteria 9795
77 Ga0207428_10156319 3300027907 Bacteria 1734
78 Ga0265337_1002841 3300028556 Bacteria 7732
79 Ga0307515_10008349 3300028794 Bacteria 20207
80 Ga0265338_10010075 3300028800 Bacteria 11172
81 Ga0265332_10018299 3300031238 Bacteria 3091
82 Ga0265332_10022488 3300031238 Bacteria 2782
83 Ga0265320_10000203 3300031240 Bacteria 48715
84 Ga0307513_10006768 3300031456 Bacteria 14951
85 Ga0307509_10001290 3300031507 Bacteria 42541
86 Ga0307509_10001580 3300031507 Bacteria 38322
87 Ga0307509_10022400 3300031507 Bacteria 7123
88 Ga0307508_10049931 3300031616 Bacteria 3725
89 Ga0265314_10012830 3300031711 Bacteria 6808
90 Ga0307410_10690783 3300031852 Unclassified 859
91 Ga0307407_10050066 3300031903 Bacteria 2388
92 Ga0307415_100207587 3300032126 Bacteria 1560
93 Ga0373949_0007874 3300035090 Unclassified 2335
94 Ga0373936_0000111 3300035113 Bacteria 28413
95 Ga0373941_0009361 3300035115 Bacteria 2465
96 Ga0373954_0024807 3300035118 Bacteria 2736
97 Ga0373960_0018723 3300035121 Bacteria 1811
98 Ga0373961_0000036 3300035241 Bacteria 83435
99 Ga0373937_0030067 3300036401 Bacteria 4920
100 Ga0373925_0677518 3300037068 Bacteria 850
101 Ga0395899_0110983 3300037312 Bacteria 1972
102 Ga0395901_0090649 3300038443 Bacteria 3200
103 Ga0453683_0000300 3300044673 Bacteria 62952
104 Ga0495650_0034095 3300046471 Bacteria 2258
105 Ga0495632_0143680 3300046519 Unclassified 1106
106 Ga0495686_0035105 3300047472 Unclassified 3226
107 Ga0496105_0032065 3300048908 Bacteria 4310
108 Ga0501031_0245704 3300049568 Unclassified 1163
109 Ga0501033_0095063 3300049570 Bacteria 2178
110 Ga0501036_0024814 3300049572 Bacteria 5056
111 Ga0501038_0009312 3300049574 Bacteria 9009
112 Ga0501039_0009377 3300049575 Bacteria 7462
113 Ga0501040_0001934 3300049576 Bacteria 13313
114 Ga0501041_0000916 3300049577 Bacteria 15983
115 Ga0501042_0017151 3300049578 Bacteria 4990
116 Ga0501046_0051625 3300049580 Bacteria 3244
117 Ga0501048_0041961 3300049582 Bacteria 3277
118 Ga0501068_0024641 3300049584 Bacteria 3534
119 Ga0501070_0035318 3300049586 Bacteria 4177
120 Ga0501071_0046183 3300049587 Bacteria 3128
121 Ga0501072_0010624 3300049588 Bacteria 7012
122 Ga0501073_0064613 3300049589 Bacteria 2552
123 Ga0501073_0105825 3300049589 Bacteria 1952
124 Ga0501073_0206631 3300049589 Unclassified 1357
125 Ga0501073_0253290 3300049589 Bacteria 1215
126 Ga0501074_0107481 3300049590 Bacteria 1997
127 Ga0501075_0003412 3300049591 Bacteria 10627
128 Ga0501076_0003665 3300049592 Bacteria 10798
129 Ga0501076_0238933 3300049592 Bacteria 1486
130 Ga0501077_0000495 3300049593 Bacteria 23863
131 Ga0501077_0047434 3300049593 Bacteria 2729
132 Ga0501227_002426 3300049665 Bacteria 4120
133 Ga0501230_004780 3300049667 Bacteria 1882
134 Ga0501235_022384 3300049669 Bacteria 1405
135 Ga0501079_0005004 3300049741 Bacteria 9828
136 Ga0501079_0249922 3300049741 Bacteria 1386
137 Ga0501080_0056318 3300049742 Bacteria 3662
138 Ga0501080_0181031 3300049742 Unclassified 1939
139 Ga0501081_0016681 3300049743 Bacteria 4857
140 Ga0501035_0032162 3300049822 Bacteria 4775
141 Ga0501044_0503538 3300049823 Unclassified 1112
142 Ga0501045_0002203 3300049824 Bacteria 13212
143 nmdc:mga05p37_63558_c1 3300050507 Unclassified 4543
144 nmdc:mga09592_362239_c1 3300050508 Bacteria 1255
145 nmdc:mga0qj67_119782_c1 3300050509 Bacteria 2128
146 nmdc:mga0qj67_49107_c1 3300050509 Bacteria 3335
147 nmdc:mga06r32_175733_c1 3300050510 Unclassified 2126
148 nmdc:mga08y16_10601_c1 3300050511 Bacteria 9671
149 nmdc:mga08y16_5091_c2 3300050511 Bacteria 12088
150 nmdc:mga0n895_220113_c1 3300050512 Bacteria 1928
151 nmdc:mga0rr50_164796_c1 3300050513 Bacteria 1802
152 nmdc:mga08x19_18884_c1 3300050514 Unclassified 4227
153 nmdc:mga0a205_103958_c1 3300050515 Bacteria 2739
154 Ga0500646_0003544 3300053090 Bacteria 3997
155 Ga0500647_0114794 3300053091 Bacteria 1278
156 Ga0500566_0012015 3300053094 Bacteria 5099
157 Ga0500566_0095351 3300053094 Bacteria 1639
158 Ga0500554_000597 3300053102 Bacteria 7347
159 Ga0500595_000116 3300053119 Bacteria 53428
160 Ga0500607_166140 3300053121 Bacteria 1001
161 Ga0500614_001473 3300053123 Bacteria 5618
162 Ga0500559_0008522 3300053136 Bacteria 4488
163 Ga0500588_0124825 3300053146 Bacteria 911
164 Ga0500603_028822 3300053150 Bacteria 1419
165 Ga0500638_164099 3300053162 Bacteria 975
166 Ga0500636_0082844 3300053177 Bacteria 1846
167 Ga0500637_0053863 3300053178 Bacteria 2297
168 Ga0500637_0066724 3300053178 Bacteria 2066
169 Ga0501084_0006008 3300054114 Bacteria 9981
170 Ga0501084_0009265 3300054114 Bacteria 8144
171 Ga0501084_0070421 3300054114 Bacteria 2928
172 Ga0501082_0006891 3300060353 Bacteria 9830
173 Ga0501082_0140139 3300060353 Bacteria 2099
174 Ga0501082_0251149 3300060353 Unclassified 1539
175 Ga0530510_0006064 3300061734 Bacteria 8395
176 Ga0530510_0027501 3300061734 Bacteria 4074
177 Ga0530510_0067937 3300061734 Bacteria 2586
178 Ga0307507_10083366
179 SwRhRL2b_contig_3513418
180 rootH1_10013676
181 JGI25405J52794_10005849
182 Ga0065716_1004006
183 Ga0065704_10104262
184 Ga0065707_10119890
185 Ga0070690_100170449
186 Ga0068869_100040919
187 Ga0068869_100619538
188 Ga0070682_100278237
189 Ga0070691_10313863
190 Ga0070667_100222262
191 Ga0070700_100112905
192 Ga0070694_100599532
193 Ga0070681_10101086
194 Ga0070681_10524452
195 Ga0068867_100116375
196 Ga0070685_10067298
197 Ga0070698_100007495
198 Ga0070679_100014719
199 Ga0070697_100023962
200 Ga0068855_100103494
201 Ga0068857_100660880
202 Ga0068856_100057408
203 Ga0070702_100163521
204 Ga0068864_100215870
205 Ga0068866_10155381
206 Ga0068863_101079595
207 Ga0068860_100592052
208 Ga0081455_10002735
209 Ga0081455_10012516
210 Ga0081455_10025688
211 Ga0081455_10047500
212 Ga0075432_10013323
213 Ga0068871_100223782
214 Ga0075428_100295584
215 Ga0075430_100064785
216 Ga0075431_100057675
217 Ga0075434_100163710
218 Ga0075434_100747263
219 Ga0075429_100138975
220 Ga0097620_100494092
221 Ga0075435_100255426
222 Ga0111539_10025874
223 Ga0105245_10000203
224 Ga0105245_10731282
225 Ga0114129_10244945
226 Ga0105237_10000006
227 Ga0105238_10224024
228 Ga0105239_10939771
229 Ga0163163_10338639
230 Ga0207705_10005957
231 Ga0207705_10131903
232 Ga0207707_10565119
233 Ga0207671_10001818
234 Ga0207652_10089612
235 Ga0207652_10230510
236 Ga0207687_10001086
237 Ga0207687_10344642
238 Ga0207689_10052298
239 Ga0207661_10506961
240 Ga0207667_10121941
241 Ga0207712_10057166
242 Ga0207712_10174342
243 Ga0207668_10191052
244 Ga0207658_10381155
245 Ga0207677_10525946
246 Ga0207708_10196244
247 Ga0207702_10476216
248 Ga0207674_10184731
249 Ga0207674_10835938
250 Ga0207675_100040855
251 Ga0207683_10044350
252 Ga0207698_10603859
253 Ga0207428_10007705
254 Ga0207428_10156319
255 Ga0265337_1002841
256 Ga0307515_10008349
257 Ga0265338_10010075
258 Ga0265332_10018299
259 Ga0265332_10022488
260 Ga0265320_10000203
261 Ga0307513_10006768
262 Ga0307509_10001290
263 Ga0307509_10001580
264 Ga0307509_10022400
265 Ga0307508_10049931
266 Ga0265314_10012830
267 Ga0307410_10690783
268 Ga0307407_10050066
269 Ga0307415_100207587
270 Ga0373949_0007874
271 Ga0373936_0000111
272 Ga0373941_0009361
273 Ga0373954_0024807
274 Ga0373960_0018723
275 Ga0373961_0000036
276 Ga0373937_0030067
277 Ga0373925_0677518
278 Ga0395899_0110983
279 Ga0395901_0090649
280 Ga0453683_0000300
281 Ga0495650_0034095
282 Ga0495632_0143680
283 Ga0495686_0035105
284 Ga0496105_0032065
285 Ga0501031_0245704
286 Ga0501033_0095063
287 Ga0501036_0024814
288 Ga0501038_0009312
289 Ga0501039_0009377
290 Ga0501040_0001934
291 Ga0501041_0000916
292 Ga0501042_0017151
293 Ga0501046_0051625
294 Ga0501048_0041961
295 Ga0501068_0024641
296 Ga0501070_0035318
297 Ga0501071_0046183
298 Ga0501072_0010624
299 Ga0501073_0064613
300 Ga0501073_0105825
301 Ga0501073_0206631
302 Ga0501073_0253290
303 Ga0501074_0107481
304 Ga0501075_0003412
305 Ga0501076_0003665
306 Ga0501076_0238933
307 Ga0501077_0000495
308 Ga0501077_0047434
309 Ga0501227_002426
310 Ga0501230_004780
311 Ga0501235_022384
312 Ga0501079_0005004
313 Ga0501079_0249922
314 Ga0501080_0056318
315 Ga0501080_0181031
316 Ga0501081_0016681
317 Ga0501035_0032162
318 Ga0501044_0503538
319 Ga0501045_0002203
320 nmdc:mga05p37_63558_c1
321 nmdc:mga09592_362239_c1
322 nmdc:mga0qj67_119782_c1
323 nmdc:mga0qj67_49107_c1
324 nmdc:mga06r32_175733_c1
325 nmdc:mga08y16_10601_c1
326 nmdc:mga08y16_5091_c2
327 nmdc:mga0n895_220113_c1
328 nmdc:mga0rr50_164796_c1
329 nmdc:mga08x19_18884_c1
330 nmdc:mga0a205_103958_c1
331 Ga0500646_0003544
332 Ga0500647_0114794
333 Ga0500566_0012015
334 Ga0500566_0095351
335 Ga0500554_000597
336 Ga0500595_000116
337 Ga0500607_166140
338 Ga0500614_001473
339 Ga0500559_0008522
340 Ga0500588_0124825
341 Ga0500603_028822
342 Ga0500638_164099
343 Ga0500636_0082844
344 Ga0500637_0053863
345 Ga0500637_0066724
346 Ga0501084_0006008
347 Ga0501084_0009265
348 Ga0501084_0070421
349 Ga0501082_0006891
350 Ga0501082_0140139
351 Ga0501082_0251149
352 Ga0530510_0006064
353 Ga0530510_0027501
354 Ga0530510_0067937

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF14518

Haem_oxygenas_2

Iron-containing redox enzyme

58

177

0.91

Structural Annotation

Top 5 Hits

ID Description Score Start End
1rcw-assembly2.cif.gz_C-2 crystal structure of ct610 from chlamydia trachomatis 0.822 6 231
1rcw-assembly2.cif.gz_C-2 crystal structure of ct610 from chlamydia trachomatis 0.8118 6 231
3bjd-assembly2.cif.gz_C-2 crystal structure of putative 3-oxoacyl-(acyl-carrier-protein) synthase from pseudomonas aeruginosa 0.7973 1 235
7twa-assembly1.cif.gz_D crystal structure of apo besc from streptomyces cattleya 0.7541 3 237
3dde-assembly1.cif.gz_A crystal structure of a domain of unknown function with a heme oxygenase-like fold (sden_3740) from shewanella denitrificans os217 at 2.30 a resolution 0.7538 4 231
ID Description Score Start End Superfamily
1rcwC00 Mainly Alpha;Up-down Bundle;Heme Oxygenase; Chain A;Heme oxygenase-like 0.8247 6 231 1.20.910.10
1rcwC00 Mainly Alpha;Up-down Bundle;Heme Oxygenase; Chain A;Heme oxygenase-like 0.8139 6 231 1.20.910.10
3hmlA00 Mainly Alpha;Up-down Bundle;Heme Oxygenase; Chain A;Heme oxygenase-like 0.7664 1 233 1.20.910.10
3oqlC00 Mainly Alpha;Up-down Bundle;Heme Oxygenase; Chain A;Heme oxygenase-like 0.7303 6 231 1.20.910.10
3ddeB00 Mainly Alpha;Up-down Bundle;Heme Oxygenase; Chain A;Heme oxygenase-like 0.7163 1 231 1.20.910.10
ID Description Score Start End GO Terms
AF-A0A661MBA8-F1-model_v4 Iron-containing redox enzyme family protein 0.9791 2 238 GO:0016491
AF-A0A3M2AE68-F1-model_v4 Iron-containing redox enzyme family protein 0.9781 1 238 GO:0016491
AF-A0A7W0VPB5-F1-model_v4 Iron-containing redox enzyme family protein 0.9748 6 206
AF-A0A7X7GWI1-F1-model_v4 Iron-containing redox enzyme family protein 0.9739 1 241 GO:0016491
AF-A0A1G9ACC8-F1-model_v4 Pyrroloquinoline-quinone synthase 0.9661 1 238

Map