F270484

General Info

Members Datasets Scaffolds Average Seq Length
177 104 354 194

Family's Representative Sequence

Representative Sequence 3300031995|Ga0307409_100171858|Ga0307409_1001718583
Length 213
Sequence MLLSVAAVSGERNLSGGQASTPLKDRLRASLALPARDGLLAGDLIEGAPDAGHQAAVLVAITDRPEPGVLLTVRREHLRTHAGQISFPGGRLDPGEDALAAALREAEEEIGLPPALVEPWGTADPYRTVTGFAVTPVLGLVPPDLPLAPHEHEVADWFEAPLSFLLDPSNQQRMSADFQGQTRHFYQINWRSRRIWGATAAILVNLTRRLAWA

Samples

Sample ID Description Type Environment
1 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
2 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
5 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
6 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
7 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
8 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
9 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
10 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
11 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
12 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
13 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
14 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
15 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
16 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
17 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
18 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
19 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
20 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
21 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
22 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
23 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
24 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
25 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
26 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
27 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
28 3300009979 Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_126 metaG Metagenome Rhizosphere
29 3300009987 Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_213 metaG Metagenome Rhizosphere
30 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
31 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
32 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
33 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
34 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
35 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
55 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300030742 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 9 Metagenome Rhizosphere
58 3300030745 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 8 Metagenome Rhizosphere
59 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
60 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
61 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
62 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
63 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
64 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
65 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
66 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
67 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
68 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
69 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
70 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
71 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
72 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
73 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
74 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
75 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
76 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
77 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
78 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
79 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
80 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
81 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
82 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
83 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
84 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
85 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
86 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
87 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
88 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
89 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
90 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
91 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
92 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
93 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
94 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
95 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
96 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
97 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
98 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
99 3300049764 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J12_A_4_control Metagenome Rhizosphere
100 3300049770 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F12_B_4_control Metagenome Rhizosphere
101 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
102 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
103 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
104 2885427238 Sphingomonas mesophila SYSUP0001 Isolate Stem Tuber

Type Distribution

Type Percentage (%)
Metagenomes 99.44
Metatranscriptomes 0
Isolates 0.56

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 6.21
Rhizosphere 92.66
Stem 0
Stem Tuber 0.56
Unclassified 6.21

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0307409_100171858 3300031995 Bacteria 1908
2 Ga0070658_10006174 3300005327 Bacteria 9714
3 Ga0070658_10118159 3300005327 Bacteria 2201
4 Ga0070658_11182713 3300005327 Bacteria 665
5 Ga0070683_100426879 3300005329 Bacteria 1265
6 Ga0070683_100738386 3300005329 Bacteria 943
7 Ga0070670_100658414 3300005331 Bacteria 940
8 Ga0070666_10311386 3300005335 Bacteria 1122
9 Ga0070661_100221609 3300005344 Bacteria 1451
10 Ga0070675_100328048 3300005354 Bacteria 1353
11 Ga0070671_100186240 3300005355 Bacteria 1759
12 Ga0070671_100267718 3300005355 Bacteria 1452
13 Ga0070671_100796569 3300005355 Bacteria 823
14 Ga0070673_100081653 3300005364 Bacteria 2622
15 Ga0070659_100024027 3300005366 Bacteria 4669
16 Ga0070659_100106839 3300005366 Bacteria 2257
17 Ga0070667_100229657 3300005367 Bacteria 1654
18 Ga0070714_100161325 3300005435 Bacteria 2029
19 Ga0070663_100425984 3300005455 Unclassified 1089
20 Ga0070663_100574173 3300005455 Bacteria 945
21 Ga0070662_100033817 3300005457 Bacteria 3602
22 Ga0070662_100901854 3300005457 Bacteria 754
23 Ga0068853_100363852 3300005539 Bacteria 1348
24 Ga0068853_101131923 3300005539 Unclassified 755
25 Ga0070665_100001846 3300005548 Bacteria 24054
26 Ga0068855_100162364 3300005563 Bacteria 2535
27 Ga0068855_100308238 3300005563 Bacteria 1752
28 Ga0070664_100005291 3300005564 Bacteria 10356
29 Ga0070664_100015549 3300005564 Bacteria 6227
30 Ga0070664_100019127 3300005564 Bacteria 5631
31 Ga0068857_100103752 3300005577 Bacteria 2553
32 Ga0068856_100078201 3300005614 Bacteria 3279
33 Ga0068856_100155059 3300005614 Bacteria 2300
34 Ga0068856_100272842 3300005614 Bacteria 1707
35 Ga0068864_100005456 3300005618 Bacteria 10426
36 Ga0068864_100727434 3300005618 Unclassified 971
37 Ga0070712_100105237 3300006175 Bacteria 2095
38 Ga0097621_100089558 3300006237 Bacteria 2573
39 Ga0097621_100102366 3300006237 Bacteria 2411
40 Ga0068871_100100137 3300006358 Unclassified 2427
41 Ga0075428_100114773 3300006844 Bacteria 2934
42 Ga0114129_10145455 3300009147 Bacteria 3248
43 Ga0105248_10071992 3300009177 Bacteria 3885
44 Ga0105032_108269 3300009979 Bacteria 858
45 Ga0105030_112918 3300009987 Bacteria 728
46 Ga0157373_10323555 3300013100 Bacteria 1097
47 Ga0157371_10043147 3300013102 Bacteria 3213
48 Ga0163162_10164212 3300013306 Bacteria 2344
49 Ga0163163_11567999 3300014325 Unclassified 720
50 Ga0163161_10008223 3300017792 Bacteria 7219
51 Ga0207656_10306415 3300025321 Unclassified 787
52 Ga0207680_10267452 3300025903 Bacteria 1185
53 Ga0207705_10007250 3300025909 Bacteria 8160
54 Ga0207693_10212758 3300025915 Bacteria 1519
55 Ga0207649_10181233 3300025920 Bacteria 1474
56 Ga0207650_10510997 3300025925 Unclassified 1005
57 Ga0207664_10083502 3300025929 Bacteria 2604
58 Ga0207644_10000303 3300025931 Bacteria 32025
59 Ga0207644_10044755 3300025931 Bacteria 3146
60 Ga0207644_10635501 3300025931 Bacteria 888
61 Ga0207690_10131738 3300025932 Bacteria 1831
62 Ga0207690_10451364 3300025932 Bacteria 1033
63 Ga0207706_10021279 3300025933 Bacteria 5826
64 Ga0207706_10572435 3300025933 Bacteria 971
65 Ga0207711_10008810 3300025941 Bacteria 8437
66 Ga0207661_10124759 3300025944 Bacteria 2198
67 Ga0207679_10016697 3300025945 Bacteria 4877
68 Ga0207667_10291236 3300025949 Bacteria 1668
69 Ga0207667_10461809 3300025949 Bacteria 1290
70 Ga0207651_10145380 3300025960 Bacteria 1838
71 Ga0207678_10704378 3300026067 Bacteria 889
72 Ga0207702_10650655 3300026078 Bacteria 1036
73 Ga0207676_10072337 3300026095 Bacteria 2771
74 Ga0207674_10512352 3300026116 Bacteria 1159
75 Ga0209974_10119949 3300027876 Bacteria 931
76 Ga0268266_10001823 3300028379 Bacteria 24089
77 Ga0268264_10298154 3300028381 Bacteria 1516
78 Ga0316183_1141572 3300030742 Bacteria 901
79 Ga0316182_1113411 3300030745 Bacteria 1513
80 Ga0307408_100027591 3300031548 Bacteria 3915
81 Ga0307408_100751773 3300031548 Bacteria 881
82 Ga0307405_10024678 3300031731 Bacteria 3439
83 Ga0307405_10034110 3300031731 Bacteria 3025
84 Ga0307413_10010878 3300031824 Bacteria 4440
85 Ga0307413_10051001 3300031824 Bacteria 2490
86 Ga0307413_10060223 3300031824 Bacteria 2336
87 Ga0307413_10140292 3300031824 Bacteria 1669
88 Ga0307413_10390992 3300031824 Bacteria 1087
89 Ga0307413_11110268 3300031824 Bacteria 683
90 Ga0307410_10003990 3300031852 Bacteria 7533
91 Ga0307410_10006290 3300031852 Bacteria 6395
92 Ga0307410_10017304 3300031852 Bacteria 4325
93 Ga0307410_10027347 3300031852 Bacteria 3604
94 Ga0307410_10659182 3300031852 Bacteria 879
95 Ga0307406_10026628 3300031901 Bacteria 3475
96 Ga0307406_10031724 3300031901 Bacteria 3219
97 Ga0307406_10075882 3300031901 Bacteria 2219
98 Ga0307406_10118283 3300031901 Bacteria 1837
99 Ga0307406_10188533 3300031901 Bacteria 1508
100 Ga0307406_10302071 3300031901 Bacteria 1230
101 Ga0307406_10469519 3300031901 Bacteria 1014
102 Ga0307407_10003617 3300031903 Bacteria 6390
103 Ga0307407_10014330 3300031903 Bacteria 3878
104 Ga0307407_10025440 3300031903 Bacteria 3119
105 Ga0307407_10093441 3300031903 Bacteria 1849
106 Ga0307407_10217179 3300031903 Bacteria 1291
107 Ga0307412_10024718 3300031911 Bacteria 3711
108 Ga0307412_10063537 3300031911 Bacteria 2491
109 Ga0307412_10500526 3300031911 Bacteria 1011
110 Ga0307409_100008561 3300031995 Bacteria 6219
111 Ga0307409_100008782 3300031995 Bacteria 6160
112 Ga0307416_100022558 3300032002 Bacteria 4547
113 Ga0307416_100109231 3300032002 Bacteria 2432
114 Ga0307416_100303427 3300032002 Bacteria 1588
115 Ga0307416_100498577 3300032002 Bacteria 1281
116 Ga0307416_100622286 3300032002 Bacteria 1162
117 Ga0307414_10025133 3300032004 Bacteria 3809
118 Ga0307414_10048174 3300032004 Bacteria 2938
119 Ga0307414_10374724 3300032004 Bacteria 1229
120 Ga0307414_10536660 3300032004 Bacteria 1040
121 Ga0307411_10005883 3300032005 Bacteria 6084
122 Ga0307411_10009697 3300032005 Bacteria 5082
123 Ga0307411_10017237 3300032005 Bacteria 4108
124 Ga0307411_10043917 3300032005 Bacteria 2863
125 Ga0307411_10157271 3300032005 Bacteria 1697
126 Ga0307411_10299530 3300032005 Bacteria 1289
127 Ga0307411_10481844 3300032005 Bacteria 1045
128 Ga0307411_10531705 3300032005 Bacteria 1000
129 Ga0307415_100006338 3300032126 Bacteria 6370
130 Ga0307415_100023396 3300032126 Bacteria 3834
131 Ga0307415_100318847 3300032126 Bacteria 1295
132 Ga0307415_100543409 3300032126 Bacteria 1024
133 Ga0373955_0192176 3300035172 Bacteria 1214
134 Ga0373937_0270584 3300036401 Bacteria 1603
135 Ga0395900_1157009 3300037418 Bacteria 690
136 Ga0395898_0207946 3300037466 Bacteria 1867
137 Ga0395905_0068771 3300037471 Bacteria 3317
138 Ga0395905_0078129 3300037471 Bacteria 3101
139 Ga0395905_0175578 3300037471 Bacteria 2011
140 Ga0395905_0271145 3300037471 Bacteria 1583
141 Ga0395905_0766959 3300037471 Bacteria 867
142 Ga0395901_0523628 3300038443 Bacteria 1204
143 Ga0436365_0134972 3300039437 Bacteria 946
144 Ga0439432_020143 3300042006 Bacteria 2219
145 Ga0439449_0061552 3300042007 Bacteria 1385
146 Ga0439449_0128884 3300042007 Bacteria 940
147 Ga0466969_0181599 3300044656 Unclassified 963
148 Ga0466966_0347834 3300044684 Unclassified 891
149 Ga0466961_0075537 3300044693 Bacteria 2136
150 Ga0466957_0394334 3300044842 Bacteria 946
151 Ga0466958_0601858 3300045836 Unclassified 715
152 Ga0466967_0000192 3300045976 Bacteria 25501
153 Ga0466967_0025810 3300045976 Bacteria 4851
154 Ga0466967_0530065 3300045976 Bacteria 1158
155 Ga0495668_0013914 3300046616 Bacteria 4731
156 Ga0495669_0188224 3300046684 Bacteria 985
157 Ga0495677_0084608 3300047445 Bacteria 1191
158 Ga0496101_0895519 3300048904 Unclassified 699
159 Ga0496103_0297028 3300048906 Bacteria 1039
160 Ga0496107_0036986 3300048910 Bacteria 3503
161 Ga0496108_0089313 3300048911 Bacteria 2619
162 Ga0496108_0232426 3300048911 Bacteria 1603
163 Ga0496109_0017588 3300048912 Bacteria 6269
164 Ga0496109_0435133 3300048912 Bacteria 1239
165 Ga0496111_0102086 3300048914 Bacteria 2108
166 Ga0496111_0193726 3300048914 Bacteria 1511
167 Ga0496112_0073396 3300048915 Bacteria 3382
168 Ga0496114_0028562 3300048917 Bacteria 4578
169 Ga0501067_0010483 3300049583 Bacteria 5131
170 Ga0501071_0228461 3300049587 Bacteria 1402
171 Ga0501074_0025675 3300049590 Bacteria 4276
172 Ga0501267_001892 3300049764 Bacteria 1843
173 Ga0501273_028825 3300049770 Bacteria 783
174 nmdc:mga05p37_989907_c1 3300050507 Bacteria 895
175 nmdc:mga09592_317265_c1 3300050508 Bacteria 1350
176 Ga0495612_0073328 3300053078 Bacteria 1430
177 2885428616 2885427238 Bacteria 2291351
178 Ga0307409_100171858
179 Ga0070658_10006174
180 Ga0070658_10118159
181 Ga0070658_11182713
182 Ga0070683_100426879
183 Ga0070683_100738386
184 Ga0070670_100658414
185 Ga0070666_10311386
186 Ga0070661_100221609
187 Ga0070675_100328048
188 Ga0070671_100186240
189 Ga0070671_100267718
190 Ga0070671_100796569
191 Ga0070673_100081653
192 Ga0070659_100024027
193 Ga0070659_100106839
194 Ga0070667_100229657
195 Ga0070714_100161325
196 Ga0070663_100425984
197 Ga0070663_100574173
198 Ga0070662_100033817
199 Ga0070662_100901854
200 Ga0068853_100363852
201 Ga0068853_101131923
202 Ga0070665_100001846
203 Ga0068855_100162364
204 Ga0068855_100308238
205 Ga0070664_100005291
206 Ga0070664_100015549
207 Ga0070664_100019127
208 Ga0068857_100103752
209 Ga0068856_100078201
210 Ga0068856_100155059
211 Ga0068856_100272842
212 Ga0068864_100005456
213 Ga0068864_100727434
214 Ga0070712_100105237
215 Ga0097621_100089558
216 Ga0097621_100102366
217 Ga0068871_100100137
218 Ga0075428_100114773
219 Ga0114129_10145455
220 Ga0105248_10071992
221 Ga0105032_108269
222 Ga0105030_112918
223 Ga0157373_10323555
224 Ga0157371_10043147
225 Ga0163162_10164212
226 Ga0163163_11567999
227 Ga0163161_10008223
228 Ga0207656_10306415
229 Ga0207680_10267452
230 Ga0207705_10007250
231 Ga0207693_10212758
232 Ga0207649_10181233
233 Ga0207650_10510997
234 Ga0207664_10083502
235 Ga0207644_10000303
236 Ga0207644_10044755
237 Ga0207644_10635501
238 Ga0207690_10131738
239 Ga0207690_10451364
240 Ga0207706_10021279
241 Ga0207706_10572435
242 Ga0207711_10008810
243 Ga0207661_10124759
244 Ga0207679_10016697
245 Ga0207667_10291236
246 Ga0207667_10461809
247 Ga0207651_10145380
248 Ga0207678_10704378
249 Ga0207702_10650655
250 Ga0207676_10072337
251 Ga0207674_10512352
252 Ga0209974_10119949
253 Ga0268266_10001823
254 Ga0268264_10298154
255 Ga0316183_1141572
256 Ga0316182_1113411
257 Ga0307408_100027591
258 Ga0307408_100751773
259 Ga0307405_10024678
260 Ga0307405_10034110
261 Ga0307413_10010878
262 Ga0307413_10051001
263 Ga0307413_10060223
264 Ga0307413_10140292
265 Ga0307413_10390992
266 Ga0307413_11110268
267 Ga0307410_10003990
268 Ga0307410_10006290
269 Ga0307410_10017304
270 Ga0307410_10027347
271 Ga0307410_10659182
272 Ga0307406_10026628
273 Ga0307406_10031724
274 Ga0307406_10075882
275 Ga0307406_10118283
276 Ga0307406_10188533
277 Ga0307406_10302071
278 Ga0307406_10469519
279 Ga0307407_10003617
280 Ga0307407_10014330
281 Ga0307407_10025440
282 Ga0307407_10093441
283 Ga0307407_10217179
284 Ga0307412_10024718
285 Ga0307412_10063537
286 Ga0307412_10500526
287 Ga0307409_100008561
288 Ga0307409_100008782
289 Ga0307416_100022558
290 Ga0307416_100109231
291 Ga0307416_100303427
292 Ga0307416_100498577
293 Ga0307416_100622286
294 Ga0307414_10025133
295 Ga0307414_10048174
296 Ga0307414_10374724
297 Ga0307414_10536660
298 Ga0307411_10005883
299 Ga0307411_10009697
300 Ga0307411_10017237
301 Ga0307411_10043917
302 Ga0307411_10157271
303 Ga0307411_10299530
304 Ga0307411_10481844
305 Ga0307411_10531705
306 Ga0307415_100006338
307 Ga0307415_100023396
308 Ga0307415_100318847
309 Ga0307415_100543409
310 Ga0373955_0192176
311 Ga0373937_0270584
312 Ga0395900_1157009
313 Ga0395898_0207946
314 Ga0395905_0068771
315 Ga0395905_0078129
316 Ga0395905_0175578
317 Ga0395905_0271145
318 Ga0395905_0766959
319 Ga0395901_0523628
320 Ga0436365_0134972
321 Ga0439432_020143
322 Ga0439449_0061552
323 Ga0439449_0128884
324 Ga0466969_0181599
325 Ga0466966_0347834
326 Ga0466961_0075537
327 Ga0466957_0394334
328 Ga0466958_0601858
329 Ga0466967_0000192
330 Ga0466967_0025810
331 Ga0466967_0530065
332 Ga0495668_0013914
333 Ga0495669_0188224
334 Ga0495677_0084608
335 Ga0496101_0895519
336 Ga0496103_0297028
337 Ga0496107_0036986
338 Ga0496108_0089313
339 Ga0496108_0232426
340 Ga0496109_0017588
341 Ga0496109_0435133
342 Ga0496111_0102086
343 Ga0496111_0193726
344 Ga0496112_0073396
345 Ga0496114_0028562
346 Ga0501067_0010483
347 Ga0501071_0228461
348 Ga0501074_0025675
349 Ga0501267_001892
350 Ga0501273_028825
351 nmdc:mga05p37_989907_c1
352 nmdc:mga09592_317265_c1
353 Ga0495612_0073328
354 2885428616

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00293

NUDIX

NUDIX domain

52

178

0.72

Structural Annotation

Top 5 Hits

ID Description Score Start End
1nqy-assembly1.cif.gz_A the structure of a coa pyrophosphatase from d. radiodurans 0.8604 33 187
5cfi-assembly4.cif.gz_D structural and functional attributes of malaria parasite ap4a hydrolase 0.8577 32 144
4kg4-assembly2.cif.gz_B crystal structure of saccharomyces cerevisiae dcp2 nudix domain (e198q mutation) 0.8231 32 145
6drq-assembly1.cif.gz_A the crystal structure of sats c-terminal domain in complex with bromine 0.8204 150 176
6am0-assembly1.cif.gz_E crystal structure of k. lactis edc1-dcp1-dcp2-edc3 decapping complex with synthetic cap substrate analog 0.8189 33 145
ID Description Score Start End Superfamily
af_P43337_8_187_3.90.79.10 Alpha Beta;Alpha-Beta Complex;Nucleoside Triphosphate Pyrophosphohydrolase;Nucleoside Triphosphate Pyrophosphohydrolase 0.8797 3 187 3.90.79.10
af_P43337_8_187_3.90.79.10 Alpha Beta;Alpha-Beta Complex;Nucleoside Triphosphate Pyrophosphohydrolase;Nucleoside Triphosphate Pyrophosphohydrolase 0.8657 3 187 3.90.79.10
1nqyA00 Alpha Beta;Alpha-Beta Complex;Nucleoside Triphosphate Pyrophosphohydrolase;Nucleoside Triphosphate Pyrophosphohydrolase 0.8604 33 187 3.90.79.10
5cfiD00 Alpha Beta;Alpha-Beta Complex;Nucleoside Triphosphate Pyrophosphohydrolase;Nucleoside Triphosphate Pyrophosphohydrolase 0.8577 32 144 3.90.79.10
af_E7FAS2_11_192_3.90.79.10 Alpha Beta;Alpha-Beta Complex;Nucleoside Triphosphate Pyrophosphohydrolase;Nucleoside Triphosphate Pyrophosphohydrolase 0.8505 33 187 3.90.79.10
ID Description Score Start End GO Terms
AF-A0A2W5PFC4-F1-model_v4 CoA pyrophosphatase 0.9734 1 193 GO:0010945
AF-A0A2W5PFC4-F1-model_v4 CoA pyrophosphatase 0.9684 1 193 GO:0010945
AF-A0A7Y3JSF6-F1-model_v4 CoA pyrophosphatase 0.9649 30 191 GO:0010945
AF-A0A6N8XUU0-F1-model_v4 CoA pyrophosphatase 0.9646 30 191 GO:0010945
AF-A0A366DY15-F1-model_v4 8-oxo-dGTP pyrophosphatase MutT (NUDIX family) 0.9646 33 192 GO:0010945

Map