F267238

General Info

Members Datasets Scaffolds Average Seq Length
175 138 350 469

Family's Representative Sequence

Representative Sequence 3300053094|Ga0500566_0002355|Ga0500566_0002355_2992_4506
Length 504
Sequence VEAEAALVNEWIDREHLDHGGSRPAAEPPKQRPPTAVPNVLAGRYASKEMAELWSPEHKVVLERRFWIAVLRAQKELGVEVPDGVLESYEAVADQVDLASIDARERVTKHDVKARLEEFAALAGEEHAHKGMTSRDLTENVEQLQLRLAVTIVRDRMVAVLARLAERAAEHEATVITGRSHNVPAQATTLGKRFATAGEELLLALERVDELLDRLPLRGVKGPVGTSQDMLDLLGSGIDQLERRVAAELGFARTLNSVGQVYPRSLDLDVVSALAQAVASPSSLCTTIRLMAGQELVTEGFAPGQVGSSAMPHKMNSRSCERVNGFMQILRGHLTMAAGLAGDQWNEGDVSDSVVRRVVLPDACFAAEGALITTLAVLDGFGAYPAVIDAELRKYLPFLATTKFLVAAVKAGTGREVAHEVIKTHAVAYALALREKPEGADDLPSRLGADARFPLSEAEVRALLSDPLDFVGDARRQTATFVSRVGDVVARHPQAATFTPEPIL

Samples

Sample ID Description Type Environment
1 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
2 3300000549 Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - LJQ_Illumina_Assembled Metagenome Rhizosphere
3 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
4 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
5 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
6 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
7 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
8 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
9 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
10 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
11 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
12 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
13 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
14 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
15 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
16 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
17 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
18 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
19 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
20 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
21 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
22 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
23 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
24 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
25 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
26 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
27 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
28 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
29 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
30 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
34 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
35 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
36 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
37 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
38 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
39 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
40 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
41 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
42 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
43 3300033442 Root nodule microbial communities collected in Santa Monica, California, United States - Edamame nodules 1 Metagenome Nodule
44 3300034816 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_3 Metagenome Rhizosphere
45 3300034817 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_1 Metagenome Rhizosphere
46 3300035084 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_1 Metagenome Rhizosphere
47 3300035085 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_2 Metagenome Rhizosphere
48 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
49 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
50 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
51 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
52 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
53 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
54 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
55 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
56 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
57 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
58 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
59 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
60 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
61 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
62 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
63 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
64 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
65 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
66 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
67 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
68 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
69 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
70 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
71 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
72 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
73 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
74 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
75 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
76 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
77 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
78 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
79 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
80 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
81 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
82 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
83 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
84 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
85 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
86 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
87 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
88 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
89 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
90 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
91 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
92 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
93 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
94 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
95 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
96 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
97 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
98 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
99 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
100 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
101 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
102 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
103 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
104 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
105 2513237096 Bradyrhizobium pachyrhizi USDA 3259 Isolate Nodule
106 2513237137 Bradyrhizobium elkanii USDA 94 Isolate Nodule
107 2513237145 Bradyrhizobium elkanii USDA 3254 Isolate Nodule
108 2517572143 Bradyrhizobium elkanii USDA 76 Isolate Nodule
109 2554235005 Streptomyces violaceusniger SPC6 Isolate Rhizosphere
110 2558860280 Kutzneria sp. 744 Isolate Unclassified
111 2643221601 Kitasatospora sp. Root187 Isolate Unclassified
112 2643221631 Kitasatospora sp. Root107 Isolate Unclassified
113 2643221961 Aeromicrobium sp. Root236 Isolate Unclassified
114 2643221962 Aeromicrobium sp. Root344 Isolate Unclassified
115 2667528175 Rhizobium tropici NFR14 Isolate Rhizoplane
116 2675903059 Asanoa hainanensis CGMCC 4.5593 Isolate Rhizosphere
117 2791355197 Bradyrhizobium sp. C9 Isolate Nodule
118 2818991472 Kitasatospora viridis DSM 44826 Isolate Rhizosphere
119 2867312974 Micromonospora musae NGC1-4 Isolate Unclassified
120 2867475112 Streptomyces sp. TM32 Isolate Unclassified
121 2867507094 Micromonospora zingiberis PLAI 1-1 Isolate Unclassified
122 2876761206 Bradyrhizobium centrolobii BR 10245 Isolate Nodule
123 2903748898 Bradyrhizobium uaiense UFLA 03-164 Isolate Nodule
124 2906610324
125 2906635258 Bradyrhizobium sp. USDA 3458 Isolate Unclassified
126 2906660503 Bradyrhizobium brasilense UFLA 03-321 Isolate Unclassified
127 2915358134 Pseudonocardia pini CAP47R Isolate Unclassified
128 2922425934
129 2935630451 Bradyrhizobium sp. I1.14.4 Isolate Nodule
130 2941507105 Bradyrhizobium sp. i1.12.3 Isolate Nodule
131 2941515067 Bradyrhizobium sp. i1.14.1 Isolate Nodule
132 2941523033 Bradyrhizobium sp. i1.8.4 Isolate Nodule
133 2941531003 Bradyrhizobium sp. LB11.1 Isolate Nodule
134 8001781756 Catellatospora tritici NEAU-YM18 Isolate Rhizosphere
135 8019555841 Bradyrhizobium sp. JR6.1 Isolate Nodule
136 8019565922 Bradyrhizobium sp. JR3.5 Isolate Nodule
137 8025413630 Streptomyces sp. CAI-17 Isolate Rhizosphere
138 8054472261 Pseudonocardia terrae RS11V-5 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 81.5
Metatranscriptomes 0
Isolates 18.5

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 6.29
Nodule 8.57
Rhizoplane 3.43
Rhizosphere 67.43
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0500566_0002355 3300053094 Bacteria 11187
2 LJQas_1002210 3300000549 Bacteria 2745
3 JGI25406J46586_10006261 3300003203 Bacteria 5492
4 Ga0070668_100000934 3300005347 Bacteria 20357
5 Ga0070671_100003541 3300005355 Bacteria 12197
6 Ga0070671_100038732 3300005355 Bacteria 3956
7 Ga0068855_100017089 3300005563 Bacteria 8728
8 Ga0068855_100141685 3300005563 Bacteria 2740
9 Ga0068858_100013749 3300005842 Bacteria 7641
10 Ga0081455_10024910 3300005937 Bacteria 5531
11 Ga0081539_10001780 3300005985 Bacteria 34234
12 Ga0075365_10027886 3300006038 Bacteria 3597
13 Ga0075365_10105256 3300006038 Bacteria 1935
14 Ga0075428_100000203 3300006844 Bacteria 56882
15 Ga0075428_100002783 3300006844 Bacteria 19053
16 Ga0075428_100037947 3300006844 Bacteria 5301
17 Ga0075430_100002175 3300006846 Bacteria 16227
18 Ga0075430_100004182 3300006846 Bacteria 12179
19 Ga0075430_100168505 3300006846 Bacteria 1822
20 Ga0075431_100001708 3300006847 Bacteria 20632
21 Ga0075429_100001858 3300006880 Bacteria 17483
22 Ga0075429_100004143 3300006880 Bacteria 12407
23 Ga0105240_10246100 3300009093 Bacteria 2070
24 Ga0105245_10005243 3300009098 Bacteria 11389
25 Ga0105245_10006520 3300009098 Bacteria 10253
26 Ga0114129_10000597 3300009147 Bacteria 44562
27 Ga0105241_10074906 3300009174 Bacteria 2637
28 Ga0105242_10013180 3300009176 Bacteria 6381
29 Ga0105249_10004161 3300009553 Bacteria 12497
30 Ga0105239_10076887 3300010375 Bacteria 3672
31 Ga0157378_10124067 3300013297 Bacteria 2384
32 Ga0157379_10027697 3300014968 Bacteria 5045
33 Ga0209233_1013878 3300025261 Bacteria 2289
34 Ga0209758_1022652 3300025297 Bacteria 2870
35 Ga0207426_1000625 3300025302 Bacteria 44906
36 Ga0207643_10006763 3300025908 Bacteria 6149
37 Ga0207671_10136671 3300025914 Bacteria 1885
38 Ga0207700_10148140 3300025928 Bacteria 1937
39 Ga0207664_10070249 3300025929 Bacteria 2818
40 Ga0207667_10022065 3300025949 Bacteria 7044
41 Ga0207668_10048409 3300025972 Bacteria 2917
42 Ga0207703_10003895 3300026035 Bacteria 12394
43 Ga0265336_10009946 3300028666 Bacteria 3270
44 Ga0307517_10014988 3300028786 Bacteria 10343
45 Ga0316579_10028416 3300031691 Bacteria 2546
46 Ga0316576_10005775 3300031727 Bacteria 7619
47 Ga0316576_10019632 3300031727 Bacteria 4633
48 Ga0316578_10012188 3300031728 Bacteria 4527
49 Ga0316577_10052813 3300031733 Bacteria 2268
50 Ga0307413_10050289 3300031824 Bacteria 2504
51 Ga0307411_10017933 3300032005 Bacteria 4050
52 Ga0307415_100069330 3300032126 Bacteria 2472
53 Ga0315911_1000011 3300033442 Bacteria 264678
54 Ga0373930_0008543 3300034816 Bacteria 1794
55 Ga0373948_0000878 3300034817 Bacteria 4002
56 Ga0373928_0000923 3300035084 Bacteria 5758
57 Ga0373929_0002674 3300035085 Bacteria 3258
58 Ga0373932_0010388 3300035112 Bacteria 2252
59 Ga0316574_0038072 3300035398 Bacteria 2952
60 Ga0373931_0000006 3300035691 Bacteria 437006
61 Ga0373931_0000064 3300035691 Bacteria 54140
62 Ga0373927_0022454 3300035695 Bacteria 4134
63 Ga0316584_0017038 3300036712 Bacteria 5216
64 Ga0316584_0033799 3300036712 Bacteria 3788
65 Ga0316584_0087258 3300036712 Bacteria 2335
66 Ga0395900_0010610 3300037418 Bacteria 9420
67 Ga0395900_0026504 3300037418 Bacteria 5935
68 Ga0395898_0162320 3300037466 Bacteria 2137
69 Ga0395901_0158189 3300038443 Bacteria 2379
70 Ga0439434_0011022 3300042435 Bacteria 2671
71 Ga0466972_0005570 3300044658 Bacteria 6307
72 Ga0466972_0017234 3300044658 Bacteria 3614
73 Ga0466972_0040754 3300044658 Bacteria 2262
74 Ga0466961_0067548 3300044693 Bacteria 2271
75 Ga0466961_0076373 3300044693 Bacteria 2123
76 Ga0466963_0031354 3300044694 Bacteria 3436
77 Ga0466963_0035924 3300044694 Bacteria 3229
78 Ga0466963_0051221 3300044694 Bacteria 2736
79 Ga0466971_0007893 3300044719 Bacteria 4636
80 Ga0466971_0027721 3300044719 Bacteria 2537
81 Ga0466957_0093716 3300044842 Bacteria 1885
82 Ga0466960_0140651 3300044901 Bacteria 1282
83 Ga0466959_0100286 3300045049 Bacteria 2073
84 Ga0466958_0094911 3300045836 Bacteria 1849
85 Ga0466967_0018781 3300045976 Bacteria 5538
86 Ga0466967_0058809 3300045976 Bacteria 3399
87 Ga0495634_0017886 3300046642 Bacteria 5052
88 Ga0496101_0022324 3300048904 Bacteria 4355
89 Ga0496102_0001059 3300048905 Bacteria 25490
90 Ga0496103_0000689 3300048906 Bacteria 25141
91 Ga0496105_0149352 3300048908 Bacteria 1921
92 Ga0496113_0036708 3300048916 Bacteria 3592
93 Ga0496116_0001533 3300048919 Bacteria 25622
94 Ga0496117_0000487 3300048920 Bacteria 65641
95 Ga0496118_0000192 3300048921 Bacteria 107736
96 Ga0496119_0000764 3300048922 Bacteria 43175
97 Ga0496120_0021528 3300048923 Bacteria 4074
98 Ga0496121_0002290 3300048924 Bacteria 29745
99 Ga0496121_0061189 3300048924 Bacteria 3091
100 Ga0496124_0046282 3300048927 Bacteria 3727
101 Ga0496125_0020640 3300048928 Bacteria 6178
102 Ga0496126_0002434 3300048929 Bacteria 25146
103 Ga0496126_0086419 3300048929 Bacteria 2764
104 Ga0501032_0001857 3300049569 Bacteria 16700
105 Ga0501032_0108087 3300049569 Bacteria 1842
106 Ga0501033_0000100 3300049570 Bacteria 82096
107 Ga0501034_0031250 3300049571 Bacteria 5410
108 Ga0501034_0135894 3300049571 Bacteria 2439
109 Ga0501037_0001047 3300049573 Bacteria 20439
110 Ga0501037_0014838 3300049573 Bacteria 5731
111 Ga0501037_0055124 3300049573 Bacteria 2907
112 Ga0501038_0019836 3300049574 Bacteria 6052
113 Ga0501039_0034582 3300049575 Bacteria 3900
114 Ga0501046_0032182 3300049580 Bacteria 4247
115 Ga0501070_0009213 3300049586 Bacteria 8348
116 Ga0501070_0103930 3300049586 Bacteria 2349
117 Ga0501072_0032773 3300049588 Bacteria 4069
118 Ga0501073_0004391 3300049589 Bacteria 10593
119 Ga0501073_0026065 3300049589 Bacteria 4189
120 Ga0501074_0002707 3300049590 Bacteria 12404
121 Ga0501074_0023724 3300049590 Bacteria 4459
122 Ga0501074_0023725 3300049590 Bacteria 4459
123 Ga0501080_0005836 3300049742 Bacteria 11017
124 Ga0501080_0047377 3300049742 Bacteria 4001
125 Ga0501083_0011214 3300049744 Bacteria 6289
126 Ga0501044_0000584 3300049823 Bacteria 44238
127 Ga0501044_0002275 3300049823 Bacteria 21900
128 nmdc:mga0yw44_28225_c1 3300050492 Bacteria 3226
129 nmdc:mga0yw44_31875_c1 3300050492 Bacteria 3068
130 nmdc:mga05p37_86_c1 3300050507 Bacteria 81974
131 nmdc:mga09592_25_c1 3300050508 Bacteria 44492
132 nmdc:mga0qj67_157535_c1 3300050509 Bacteria 1843
133 nmdc:mga0qj67_164_c1 3300050509 Bacteria 44665
134 nmdc:mga0qj67_8036_c1 3300050509 Bacteria 7804
135 nmdc:mga06r32_281_c1 3300050510 Bacteria 42391
136 nmdc:mga06r32_3486_c1 3300050510 Bacteria 14041
137 Ga0495619_0038237 3300053085 Bacteria 3130
138 Ga0500651_0160581 3300053093 Bacteria 1344
139 Ga0500593_021111 3300053117 Bacteria 2865
140 Ga0500568_0000120 3300053139 Bacteria 70393
141 Ga0466962_0038089 3300061719 Bacteria 2303
142 2513661262 2513237096 Bacteria 8722461
143 2513858198 2513237137 Bacteria 9558895
144 2513922983 2513237145 Bacteria 8979722
145 2517893913 2517572143 Bacteria 9484767
146 2554259785 2554235005 Bacteria 6457341
147 2559428238 2558860280 Bacteria 11429938
148 2644015535 2643221601 Bacteria 7493239
149 2644178057 2643221631 Bacteria 8168043
150 2645722074 2643221961 Bacteria 3919167
151 2645724916 2643221962 Bacteria 3874254
152 2671122904 2667528175 Bacteria 7532676
153 2676482775 2675903059 Bacteria 8644972
154 2793072446 2791355197 Bacteria 8420563
155 2819744049 2818991472 Bacteria 10089953
156 2867319077 2867312974 Bacteria 7058875
157 2867481343 2867475112 Bacteria 6909112
158 2867510186 2867507094 Bacteria 6506033
159 2876766765 2876761206 Bacteria 10111113
160 2903751920 2903748898 Bacteria 9972761
161 2906610803
162 2906635963 2906635258 Bacteria 8601019
163 2906663939 2906660503 Bacteria 8595048
164 2915362375 2915358134 Bacteria 6050864
165 2922428524
166 2935634504 2935630451 Bacteria 8169952
167 2941508990 2941507105 Bacteria 8166816
168 2941516819 2941515067 Bacteria 8166720
169 2941525086 2941523033 Bacteria 8169134
170 2941536304 2941531003 Bacteria 7653939
171 8001789513 8001781756 Bacteria 9586736
172 8019558473 8019555841 Bacteria 9642137
173 8019566824 8019565922 Bacteria 9639779
174 8025418674 8025413630 Bacteria 7014048
175 8054478711 8054472261 Bacteria 7464355
176 Ga0500566_0002355
177 LJQas_1002210
178 JGI25406J46586_10006261
179 Ga0070668_100000934
180 Ga0070671_100003541
181 Ga0070671_100038732
182 Ga0068855_100017089
183 Ga0068855_100141685
184 Ga0068858_100013749
185 Ga0081455_10024910
186 Ga0081539_10001780
187 Ga0075365_10027886
188 Ga0075365_10105256
189 Ga0075428_100000203
190 Ga0075428_100002783
191 Ga0075428_100037947
192 Ga0075430_100002175
193 Ga0075430_100004182
194 Ga0075430_100168505
195 Ga0075431_100001708
196 Ga0075429_100001858
197 Ga0075429_100004143
198 Ga0105240_10246100
199 Ga0105245_10005243
200 Ga0105245_10006520
201 Ga0114129_10000597
202 Ga0105241_10074906
203 Ga0105242_10013180
204 Ga0105249_10004161
205 Ga0105239_10076887
206 Ga0157378_10124067
207 Ga0157379_10027697
208 Ga0209233_1013878
209 Ga0209758_1022652
210 Ga0207426_1000625
211 Ga0207643_10006763
212 Ga0207671_10136671
213 Ga0207700_10148140
214 Ga0207664_10070249
215 Ga0207667_10022065
216 Ga0207668_10048409
217 Ga0207703_10003895
218 Ga0265336_10009946
219 Ga0307517_10014988
220 Ga0316579_10028416
221 Ga0316576_10005775
222 Ga0316576_10019632
223 Ga0316578_10012188
224 Ga0316577_10052813
225 Ga0307413_10050289
226 Ga0307411_10017933
227 Ga0307415_100069330
228 Ga0315911_1000011
229 Ga0373930_0008543
230 Ga0373948_0000878
231 Ga0373928_0000923
232 Ga0373929_0002674
233 Ga0373932_0010388
234 Ga0316574_0038072
235 Ga0373931_0000006
236 Ga0373931_0000064
237 Ga0373927_0022454
238 Ga0316584_0017038
239 Ga0316584_0033799
240 Ga0316584_0087258
241 Ga0395900_0010610
242 Ga0395900_0026504
243 Ga0395898_0162320
244 Ga0395901_0158189
245 Ga0439434_0011022
246 Ga0466972_0005570
247 Ga0466972_0017234
248 Ga0466972_0040754
249 Ga0466961_0067548
250 Ga0466961_0076373
251 Ga0466963_0031354
252 Ga0466963_0035924
253 Ga0466963_0051221
254 Ga0466971_0007893
255 Ga0466971_0027721
256 Ga0466957_0093716
257 Ga0466960_0140651
258 Ga0466959_0100286
259 Ga0466958_0094911
260 Ga0466967_0018781
261 Ga0466967_0058809
262 Ga0495634_0017886
263 Ga0496101_0022324
264 Ga0496102_0001059
265 Ga0496103_0000689
266 Ga0496105_0149352
267 Ga0496113_0036708
268 Ga0496116_0001533
269 Ga0496117_0000487
270 Ga0496118_0000192
271 Ga0496119_0000764
272 Ga0496120_0021528
273 Ga0496121_0002290
274 Ga0496121_0061189
275 Ga0496124_0046282
276 Ga0496125_0020640
277 Ga0496126_0002434
278 Ga0496126_0086419
279 Ga0501032_0001857
280 Ga0501032_0108087
281 Ga0501033_0000100
282 Ga0501034_0031250
283 Ga0501034_0135894
284 Ga0501037_0001047
285 Ga0501037_0014838
286 Ga0501037_0055124
287 Ga0501038_0019836
288 Ga0501039_0034582
289 Ga0501046_0032182
290 Ga0501070_0009213
291 Ga0501070_0103930
292 Ga0501072_0032773
293 Ga0501073_0004391
294 Ga0501073_0026065
295 Ga0501074_0002707
296 Ga0501074_0023724
297 Ga0501074_0023725
298 Ga0501080_0005836
299 Ga0501080_0047377
300 Ga0501083_0011214
301 Ga0501044_0000584
302 Ga0501044_0002275
303 nmdc:mga0yw44_28225_c1
304 nmdc:mga0yw44_31875_c1
305 nmdc:mga05p37_86_c1
306 nmdc:mga09592_25_c1
307 nmdc:mga0qj67_157535_c1
308 nmdc:mga0qj67_164_c1
309 nmdc:mga0qj67_8036_c1
310 nmdc:mga06r32_281_c1
311 nmdc:mga06r32_3486_c1
312 Ga0495619_0038237
313 Ga0500651_0160581
314 Ga0500593_021111
315 Ga0500568_0000120
316 Ga0466962_0038089
317 2513661262
318 2513858198
319 2513922983
320 2517893913
321 2554259785
322 2559428238
323 2644015535
324 2644178057
325 2645722074
326 2645724916
327 2671122904
328 2676482775
329 2793072446
330 2819744049
331 2867319077
332 2867481343
333 2867510186
334 2876766765
335 2903751920
336 2906610803
337 2906635963
338 2906663939
339 2915362375
340 2922428524
341 2935634504
342 2941508990
343 2941516819
344 2941525086
345 2941536304
346 8001789513
347 8019558473
348 8019566824
349 8025418674
350 8054478711

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF10397

ADSL_C

Adenylosuccinate lyase C-terminus

397

481

0.94

PF00206

Lyase_1

Lyase

47

332

0.86

Structural Annotation

Top 5 Hits

ID Description Score Start End
4nle-assembly1.cif.gz_A-2 crystal structure of apo adenylosuccinate lyase from mycobacterium smegmatis 0.896 2 458
4nle-assembly1.cif.gz_A-2 crystal structure of apo adenylosuccinate lyase from mycobacterium smegmatis 0.8869 2 458
4nle-assembly1.cif.gz_B-2 crystal structure of apo adenylosuccinate lyase from mycobacterium smegmatis 0.8819 2 458
4nle-assembly1.cif.gz_B-2 crystal structure of apo adenylosuccinate lyase from mycobacterium smegmatis 0.88 2 458
5eyt-assembly1.cif.gz_A crystal structure of adenylosuccinate lyase from schistosoma mansoni in complex with amp 0.8722 4 461
ID Description Score Start End Superfamily
af_I6XWA1_12_93_1.10.275.10 Mainly Alpha;Orthogonal Bundle;Fumarase C; Chain B, domain 1;Fumarase/aspartase (N-terminal domain) 0.9667 12 93 1.10.275.10
af_I6XWA1_12_93_1.10.275.10 Mainly Alpha;Orthogonal Bundle;Fumarase C; Chain B, domain 1;Fumarase/aspartase (N-terminal domain) 0.9554 12 93 1.10.275.10
4nleB03 Mainly Alpha;Orthogonal Bundle;Ribonucleotide Reductase Protein R1; domain 1;Fumarase/aspartase (C-terminal domain) 0.9461 352 426 1.10.40.30
4flcA01 Mainly Alpha;Orthogonal Bundle;Fumarase C; Chain B, domain 1;Fumarase/aspartase (N-terminal domain) 0.9289 5 90 1.10.275.10
2j84C01 Mainly Alpha;Orthogonal Bundle;Fumarase C; Chain B, domain 1;Fumarase/aspartase (N-terminal domain) 0.9257 5 90 1.10.275.10
ID Description Score Start End GO Terms
AF-A0A6L7QH63-F1-model_v4 Adenylosuccinate lyase 0.9651 1 98 GO:0004018
GO:0005829
GO:0044208
GO:0070626
AF-A0A3D5JAJ1-F1-model_v4 Adenylosuccinate lyase 0.9616 1 124 GO:0004018
GO:0005829
GO:0044208
GO:0070626
AF-A0A109S6L6-F1-model_v4 deleted 0.9574 1 96
AF-A0A7K2JXV5-F1-model_v4 Adenylosuccinate lyase 0.9532 1 110 GO:0004018
GO:0005829
GO:0044208
GO:0070626
AF-A0A3C1P5H1-F1-model_v4 Adenylosuccinate lyase 0.9519 19 124 GO:0004018
GO:0005829
GO:0044208
GO:0070626

Map