F267062

General Info

Members Datasets Scaffolds Average Seq Length
175 142 168 361

Family's Representative Sequence

Representative Sequence 3300048924|Ga0496121_0009448|Ga0496121_0009448_1743_2975
Length 410
Sequence MKRKQVQYSAACHSIKDNDHGGGFQWSGRRKGPCQGDELTSAIAERTYAAADGNSHLEAAQACIVGVGVANPATSYSQNELIDLLHITDERIRSLFLKGAIERRYLTLPPAHGDGRRYPESQAALLEKHRRFAIDMGARALHECLDGIGAELGDVSYLCCVTSTGFLVPGVSAHLIKALGLSAACTRLDVVGMGCNAGLNGLNATTSWSQANPGKLAILLCVEVCSAAYVFDDTMRSSVVNSLFGDGAAAAAIVTRSTSEGGRLGPTVLRFQSRLISSAIDGMRFDWDEGHGRFSFYLDPMVPYVVGANAPPLVDDLLKSAGLRRSAIRHWLVHSGGKKVIDAIKVNLGLSSSDLRYTSGVLRDYGNLSSGSFLFSYKRLVEEQSARPGDYGIMMTMGPGATIESALLRW

Samples

Sample ID Description Type Environment
1 2551306166 Nocardia tenerifensis NBRC 101015 Isolate Rhizosphere
2 2751185782 Actinoplanes subtropicus NRRL B-24665 Isolate Rhizosphere
3 2870721527 Saccharothrix ecbatanensis DSM 45486 Isolate Rhizosphere
4 2915768154 Amycolatopsis pittospori PIP199 Isolate Unclassified
5 2919130084 Xanthomonas sp. 1678 Isolate Rhizosphere
6 2929195423 Xanthomonas sp. R-73098 Hybrid assembly Isolate Unclassified
7 3006493962 Streptomyces grisecoloratus TRM S81-3 Isolate Rhizosphere
8 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
9 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
10 3300003752 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 Metagenome Endosphere
11 3300003756 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 Metagenome Endosphere
12 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
13 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
14 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
15 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
16 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
17 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
18 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
19 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
20 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
21 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
22 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
23 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
24 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
25 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
26 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
27 3300006948 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 Metagenome Nodule
28 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
29 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
30 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
31 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
32 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
33 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
34 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
35 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
44 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
45 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
46 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
47 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
48 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
49 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
50 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
51 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
52 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
53 3300031889 Wild Oat associated soil bacterial communities from Lone Jack Road, Encinitas, CA, USA - WO Metagenome Rhizosphere
54 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
55 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
56 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
57 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
58 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
59 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
60 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
61 3300035207 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 Metagenome Rhizosphere
62 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
63 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
64 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
65 3300041451 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_3 MetaG Metagenome Rhizoplane
66 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
67 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
68 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
69 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
70 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
71 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
72 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
73 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
74 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
75 3300046458 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co3_19_46 rhizosphere Metagenome Rhizosphere
76 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
77 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
78 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
79 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
80 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
81 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
82 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
83 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
84 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
85 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
86 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
87 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
88 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
89 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
90 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
91 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
92 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
93 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
94 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
95 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
96 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
97 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
98 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
99 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
100 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
101 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
102 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
103 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
104 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
105 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
106 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
107 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
108 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
109 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
110 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
111 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
112 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
113 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
114 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
115 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
116 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
117 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
118 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
119 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
120 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
121 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
122 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
123 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
124 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
125 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
126 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
127 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
128 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
129 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
130 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
131 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
132 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
133 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
134 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
135 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
136 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
137 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
138 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
139 3300053083 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 rhizosphere Metagenome Rhizosphere
140 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
141 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
142 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 96
Metatranscriptomes 0
Isolates 4

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 5.71
Nodule 0.57
Rhizoplane 2.86
Rhizosphere 76
Stem 0
Stem Tuber 0
Unclassified 14.86

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH2_10071054 3300003320 Bacteria 10223
2 rootH2_10114138 3300003320 Bacteria 3564
3 rootL2_10184265 3300003322 Bacteria 2686
4 Ga0055539_1000271 3300003752 Bacteria 30634
5 Ga0055533_1000193 3300003756 Bacteria 50436
6 Ga0070658_10033158 3300005327 Bacteria 4154
7 Ga0070680_100119895 3300005336 Bacteria 2195
8 Ga0070661_100036300 3300005344 Bacteria 3583
9 Ga0070714_100000737 3300005435 Bacteria 23193
10 Ga0070714_100001204 3300005435 Bacteria 18662
11 Ga0070708_100012829 3300005445 Bacteria 6844
12 Ga0070706_100044476 3300005467 Bacteria 4102
13 Ga0070707_100061669 3300005468 Bacteria 3597
14 Ga0070698_100065489 3300005471 Bacteria 3659
15 Ga0070698_100285023 3300005471 Bacteria 1583
16 Ga0070699_100011074 3300005518 Bacteria 7798
17 Ga0070679_100013887 3300005530 Bacteria 7716
18 Ga0070684_100051948 3300005535 Bacteria 3562
19 Ga0068862_100020763 3300005844 Bacteria 5486
20 Ga0070717_10030272 3300006028 Bacteria 4348
21 Ga0075363_100012407 3300006048 Bacteria 4107
22 Ga0075363_100024085 3300006048 Bacteria 3092
23 Ga0075428_100358990 3300006844 Bacteria 1563
24 Ga0099826_10118807 3300006948 Bacteria 1561
25 Ga0105249_10022765 3300009553 Bacteria 5616
26 Ga0157369_10038058 3300013105 Bacteria 5262
27 Ga0182007_10020678 3300015262 Bacteria 2349
28 Ga0213875_10008004 3300021388 Bacteria 5431
29 Ga0209674_100230 3300025226 Bacteria 49495
30 Ga0209026_1007747 3300025250 Bacteria 2352
31 Ga0209677_100193 3300025253 Bacteria 49475
32 Ga0207705_10036497 3300025909 Bacteria 3517
33 Ga0207684_10037708 3300025910 Bacteria 4102
34 Ga0207684_10123060 3300025910 Bacteria 2225
35 Ga0207649_10170769 3300025920 Bacteria 1515
36 Ga0207652_10023859 3300025921 Bacteria 5072
37 Ga0207646_10030168 3300025922 Bacteria 4918
38 Ga0207664_10000788 3300025929 Bacteria 21396
39 Ga0207664_10003097 3300025929 Bacteria 11050
40 Ga0207670_10188693 3300025936 Bacteria 1558
41 Ga0207712_10014481 3300025961 Bacteria 5075
42 Ga0207674_10091079 3300026116 Bacteria 3040
43 Ga0265336_10008266 3300028666 Bacteria 3659
44 Ga0307515_10004232 3300028794 Bacteria 29810
45 Ga0307515_10006786 3300028794 Bacteria 22774
46 Ga0307515_10069695 3300028794 Bacteria 4800
47 Ga0265338_10015081 3300028800 Bacteria 8527
48 Ga0307512_10002119 3300030522 Bacteria 26050
49 Ga0307512_10015893 3300030522 Bacteria 6961
50 Ga0307512_10074169 3300030522 Bacteria 2501
51 Ga0307512_10115074 3300030522 Bacteria 1753
52 Ga0307513_10016267 3300031456 Bacteria 8980
53 Ga0307509_10160395 3300031507 Bacteria 2148
54 Ga0307408_100136685 3300031548 Bacteria 1919
55 Ga0307508_10035876 3300031616 Bacteria 4467
56 Ga0307516_10000456 3300031730 Bacteria 54106
57 Ga0307516_10000667 3300031730 Bacteria 46363
58 Ga0326468_10000226 3300031889 Bacteria 5882
59 Ga0307406_10064951 3300031901 Bacteria 2370
60 Ga0307407_10018026 3300031903 Bacteria 3559
61 Ga0307409_100007376 3300031995 Bacteria 6572
62 Ga0307409_100097064 3300031995 Unclassified 2433
63 Ga0307416_100152239 3300032002 Unclassified 2123
64 Ga0307415_100022566 3300032126 Bacteria 3887
65 Ga0307415_100096667 3300032126 Bacteria 2153
66 Ga0307415_100213916 3300032126 Unclassified 1540
67 Ga0307507_10010699 3300033179 Bacteria 11771
68 Ga0307510_10000204 3300033180 Bacteria 51820
69 Ga0373942_0000325 3300035207 Bacteria 13005
70 Ga0373942_0002013 3300035207 Bacteria 5055
71 Ga0373925_0006685 3300037068 Bacteria 8457
72 Ga0395905_0033295 3300037471 Bacteria 4842
73 Ga0395905_0097589 3300037471 Bacteria 2759
74 Ga0436364_0996571 3300037853 Unclassified 2504
75 Ga0436364_1267834 3300037853 Bacteria 5519
76 Ga0451791_0624072 3300041451 Bacteria 3016
77 Ga0451807_2688053 3300041486 Unclassified 1765
78 Ga0451853_2951460 3300041512 Unclassified 1223
79 Ga0466969_0000780 3300044656 Bacteria 17384
80 Ga0466966_0006077 3300044684 Bacteria 7975
81 Ga0466966_0021969 3300044684 Bacteria 4189
82 Ga0466961_0005252 3300044693 Bacteria 8152
83 Ga0466961_0019402 3300044693 Bacteria 4373
84 Ga0466970_0005479 3300044765 Bacteria 6301
85 Ga0466959_0002757 3300045049 Bacteria 11308
86 Ga0466967_0221101 3300045976 Bacteria 1800
87 Ga0495590_0000029 3300046457 Bacteria 146662
88 Ga0495591_000798 3300046458 Bacteria 22323
89 Ga0495629_0009822 3300046459 Bacteria 6982
90 Ga0495605_0003249 3300046474 Bacteria 9758
91 Ga0495662_0003209 3300046476 Bacteria 8261
92 Ga0495584_0000036 3300046491 Bacteria 94785
93 Ga0495584_0000052 3300046491 Bacteria 87015
94 Ga0495584_0010731 3300046491 Bacteria 4704
95 Ga0495584_0163649 3300046491 Bacteria 1131
96 Ga0495585_0051494 3300046492 Bacteria 2281
97 Ga0495596_0013787 3300046500 Bacteria 3418
98 Ga0495607_0003151 3300046501 Bacteria 12784
99 Ga0495583_0000495 3300046506 Bacteria 57229
100 Ga0495606_0006232 3300046507 Bacteria 11077
101 Ga0495606_0007073 3300046507 Bacteria 10153
102 Ga0495616_0028387 3300046513 Bacteria 2963
103 Ga0495631_0003924 3300046518 Bacteria 8034
104 Ga0495632_0022905 3300046519 Bacteria 3343
105 Ga0495637_0000002 3300046520 Bacteria 629280
106 Ga0495644_0005445 3300046523 Bacteria 4972
107 Ga0495642_0001314 3300046528 Bacteria 11131
108 Ga0495652_0117139 3300046529 Bacteria 2132
109 Ga0495640_0023746 3300046533 Bacteria 4461
110 Ga0495633_0001637 3300046558 Bacteria 16894
111 Ga0495668_0013936 3300046616 Bacteria 4726
112 Ga0495611_0000434 3300046648 Bacteria 25748
113 Ga0495661_0026604 3300046665 Bacteria 3724
114 Ga0495599_0063123 3300046678 Bacteria 2314
115 Ga0495613_0003641 3300046689 Bacteria 11543
116 Ga0495624_0049281 3300046690 Bacteria 2672
117 Ga0495670_0104703 3300046691 Bacteria 1460
118 Ga0495649_0000035 3300046694 Bacteria 134766
119 Ga0495589_0006944 3300046794 Bacteria 5943
120 Ga0495660_0002692 3300046810 Bacteria 11224
121 Ga0495581_0132822 3300047315 Bacteria 1450
122 Ga0495636_0000785 3300047318 Bacteria 11687
123 Ga0495674_0003063 3300047319 Bacteria 16241
124 Ga0495672_0000056 3300047320 Bacteria 223740
125 Ga0495683_0000058 3300047323 Bacteria 118045
126 Ga0495677_0000141 3300047445 Bacteria 34627
127 Ga0495677_0010793 3300047445 Bacteria 3347
128 Ga0495679_026820 3300047446 Bacteria 1908
129 Ga0495681_0004223 3300047470 Bacteria 9855
130 Ga0495686_0012531 3300047472 Bacteria 5927
131 Ga0495626_0009611 3300048091 Bacteria 5217
132 Ga0496102_0277484 3300048905 Bacteria 1580
133 Ga0496110_0075495 3300048913 Bacteria 2995
134 Ga0496115_0052753 3300048918 Bacteria 3263
135 Ga0496121_0009448 3300048924 Bacteria 11207
136 Ga0496125_0218287 3300048928 Bacteria 1231
137 Ga0495678_000086 3300049459 Bacteria 117150
138 Ga0495682_0004723 3300049460 Bacteria 5760
139 Ga0501031_0042483 3300049568 Bacteria 2967
140 Ga0501032_0121874 3300049569 Bacteria 1723
141 Ga0501033_0011281 3300049570 Bacteria 6841
142 Ga0501033_0204767 3300049570 Bacteria 1408
143 Ga0501034_0017438 3300049571 Bacteria 7363
144 Ga0501034_0033056 3300049571 Bacteria 5252
145 Ga0501036_0006560 3300049572 Bacteria 9450
146 Ga0501036_0121846 3300049572 Bacteria 2202
147 Ga0501037_0004875 3300049573 Bacteria 9758
148 Ga0501038_0022852 3300049574 Bacteria 5598
149 Ga0501038_0118183 3300049574 Bacteria 2189
150 Ga0501038_0146582 3300049574 Bacteria 1927
151 Ga0501039_0009708 3300049575 Bacteria 7334
152 Ga0501043_0004782 3300049579 Bacteria 10968
153 Ga0501043_0020841 3300049579 Bacteria 5142
154 Ga0501047_0007747 3300049581 Bacteria 10111
155 Ga0501069_0191262 3300049585 Bacteria 1184
156 Ga0501070_0001340 3300049586 Bacteria 22009
157 Ga0501035_0033798 3300049822 Bacteria 4648
158 Ga0501044_0031760 3300049823 Bacteria 5555
159 Ga0501044_0050518 3300049823 Bacteria 4289
160 Ga0501045_0121148 3300049824 Bacteria 1943
161 nmdc:mga00v17_162442_c1 3300050491 Bacteria 1438
162 nmdc:mga07m45_27778_c1 3300050496 Bacteria 3120
163 Ga0495601_0068394 3300053077 Bacteria 2264
164 Ga0495655_0041844 3300053083 Bacteria 1173
165 Ga0500644_0045763 3300053088 Bacteria 1476
166 Ga0500651_0144105 3300053093 Bacteria 1434
167 Ga0466962_0007007 3300061719 Bacteria 5404
168 Ga0466962_0037466 3300061719 Bacteria 2322

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300006028 Ga0070717_10030272 Ga0070717_100302722 290
2 3300046678 Ga0495599_0063123 Ga0495599_0063123_798_1901 310
3 3300031901 Ga0307406_10064951 Ga0307406_100649511 312
4 3300046491 Ga0495584_0163649 Ga0495584_0163649_20_1084 315
5 3300053083 Ga0495655_0041844 Ga0495655_0041844_13_1053 315
6 3300025250 Ga0209026_1007747 Ga0209026_10077472 317
7 3300028666 Ga0265336_10008266 Ga0265336_100082662 317
8 3300028800 Ga0265338_10015081 Ga0265338_100150815 317
9 3300037471 Ga0395905_0033295 Ga0395905_0033295_1322_2380 317
10 3300048905 Ga0496102_0277484 Ga0496102_0277484_218_1384 317
11 3300048913 Ga0496110_0075495 Ga0496110_0075495_256_1422 317
12 3300048918 Ga0496115_0052753 Ga0496115_0052753_850_2016 317
13 3300048928 Ga0496125_0218287 Ga0496125_0218287_20_1186 317
14 3300003322 rootL2_10184265 rootL2_101842652 318
15 3300035207 Ga0373942_0000325 Ga0373942_0000325_8177_9232 318
16 3300041451 Ga0451791_0624072 Ga0451791_0624072_647_1687 318
17 3300037853 Ga0436364_1267834 Ga0436364_1267834_4143_5222 319
18 3300050491 nmdc:mga00v17_162442_c1 nmdc:mga00v17_162442_c1_288_1367 319
19 3300041486 Ga0451807_2688053 Ga0451807_2688053_553_1647 320
20 3300006844 Ga0075428_100358990 Ga0075428_1003589902 321
21 3300006948 Ga0099826_10118807 Ga0099826_101188072 321
22 3300031456 Ga0307513_10016267 Ga0307513_100162676 321
23 3300046459 Ga0495629_0009822 Ga0495629_0009822_5869_6963 321
24 3300046476 Ga0495662_0003209 Ga0495662_0003209_1479_2573 321
25 3300046689 Ga0495613_0003641 Ga0495613_0003641_5912_7006 321
26 3300047315 Ga0495581_0132822 Ga0495581_0132822_157_1251 321
27 3300037068 Ga0373925_0006685 Ga0373925_0006685_6997_8085 322
28 3300005327 Ga0070658_10033158 Ga0070658_100331582 324
29 3300005336 Ga0070680_100119895 Ga0070680_1001198952 324
30 3300005344 Ga0070661_100036300 Ga0070661_1000363003 324
31 3300005530 Ga0070679_100013887 Ga0070679_1000138874 324
32 3300005535 Ga0070684_100051948 Ga0070684_1000519483 324
33 3300013105 Ga0157369_10038058 Ga0157369_100380583 324
34 3300025909 Ga0207705_10036497 Ga0207705_100364971 324
35 3300025920 Ga0207649_10170769 Ga0207649_101707691 324
36 3300025921 Ga0207652_10023859 Ga0207652_100238592 324
37 3300026116 Ga0207674_10091079 Ga0207674_100910793 324
38 3300037471 Ga0395905_0097589 Ga0395905_0097589_1068_2126 324
39 iso_pu_bacteria 3006493962 3006497845 324
40 3300005435 Ga0070714_100000737 Ga0070714_10000073712 325
41 3300025929 Ga0207664_10000788 Ga0207664_1000078815 325
42 3300045976 Ga0466967_0221101 Ga0466967_0221101_590_1687 325
43 iso_pu_bacteria 2919130084 2919133494 325
44 iso_pu_bacteria 2929195423 2929197452 325
45 3300028794 Ga0307515_10004232 Ga0307515_100042328 326
46 3300030522 Ga0307512_10002119 Ga0307512_100021192 326
47 3300031616 Ga0307508_10035876 Ga0307508_100358763 326
48 3300044684 Ga0466966_0006077 Ga0466966_0006077_1864_2931 326
49 3300044693 Ga0466961_0019402 Ga0466961_0019402_376_1443 326
50 3300053093 Ga0500651_0144105 Ga0500651_0144105_162_1295 326
51 3300061719 Ga0466962_0037466 Ga0466962_0037466_161_1228 326
52 3300049824 Ga0501045_0121148 Ga0501045_0121148_839_1933 328
53 3300003752 Ga0055539_1000271 Ga0055539_10002713 330
54 3300003756 Ga0055533_1000193 Ga0055533_10001933 330
55 3300025226 Ga0209674_100230 Ga0209674_1002303 330
56 3300025253 Ga0209677_100193 Ga0209677_1001933 330
57 3300061719 Ga0466962_0007007 Ga0466962_0007007_3602_4720 330
58 iso_pu_bacteria 2551306166 2552112509 330
59 iso_pu_bacteria 2915768154 2915769004 330
60 3300003320 rootH2_10114138 rootH2_101141382 331
61 3300005445 Ga0070708_100012829 Ga0070708_1000128294 331
62 3300005467 Ga0070706_100044476 Ga0070706_1000444762 331
63 3300005468 Ga0070707_100061669 Ga0070707_1000616692 331
64 3300005471 Ga0070698_100065489 Ga0070698_1000654892 331
65 3300005518 Ga0070699_100011074 Ga0070699_1000110745 331
66 3300005844 Ga0068862_100020763 Ga0068862_1000207634 331
67 3300006048 Ga0075363_100012407 Ga0075363_1000124075 331
68 3300009553 Ga0105249_10022765 Ga0105249_100227653 331
69 3300021388 Ga0213875_10008004 Ga0213875_100080041 331
70 3300025910 Ga0207684_10037708 Ga0207684_100377083 331
71 3300025910 Ga0207684_10123060 Ga0207684_101230601 331
72 3300025922 Ga0207646_10030168 Ga0207646_100301683 331
73 3300025936 Ga0207670_10188693 Ga0207670_101886932 331
74 3300025961 Ga0207712_10014481 Ga0207712_100144813 331
75 3300030522 Ga0307512_10015893 Ga0307512_100158934 331
76 3300030522 Ga0307512_10074169 Ga0307512_100741692 331
77 3300031548 Ga0307408_100136685 Ga0307408_1001366851 331
78 3300031889 Ga0326468_10000226 Ga0326468_100002264 331
79 3300031903 Ga0307407_10018026 Ga0307407_100180262 331
80 3300031995 Ga0307409_100007376 Ga0307409_1000073764 331
81 3300031995 Ga0307409_100097064 Ga0307409_1000970642 331
82 3300032002 Ga0307416_100152239 Ga0307416_1001522392 331
83 3300032126 Ga0307415_100096667 Ga0307415_1000966672 331
84 3300032126 Ga0307415_100213916 Ga0307415_1002139161 331
85 3300037853 Ga0436364_0996571 Ga0436364_0996571_973_2187 331
86 3300041512 Ga0451853_2951460 Ga0451853_2951460_64_1203 331
87 3300044656 Ga0466969_0000780 Ga0466969_0000780_12465_13568 331
88 3300044684 Ga0466966_0021969 Ga0466966_0021969_616_1719 331
89 3300044693 Ga0466961_0005252 Ga0466961_0005252_5176_6279 331
90 3300044765 Ga0466970_0005479 Ga0466970_0005479_5157_6260 331
91 3300045049 Ga0466959_0002757 Ga0466959_0002757_235_1338 331
92 3300046529 Ga0495652_0117139 Ga0495652_0117139_771_1937 331
93 3300046533 Ga0495640_0023746 Ga0495640_0023746_234_1400 331
94 3300046690 Ga0495624_0049281 Ga0495624_0049281_793_1959 331
95 3300047319 Ga0495674_0003063 Ga0495674_0003063_5930_7096 331
96 3300049568 Ga0501031_0042483 Ga0501031_0042483_343_1434 331
97 3300049569 Ga0501032_0121874 Ga0501032_0121874_592_1683 331
98 3300049570 Ga0501033_0204767 Ga0501033_0204767_35_1126 331
99 3300049571 Ga0501034_0033056 Ga0501034_0033056_1252_2343 331
100 3300049572 Ga0501036_0121846 Ga0501036_0121846_1024_2115 331
101 3300049574 Ga0501038_0022852 Ga0501038_0022852_404_1495 331
102 3300049579 Ga0501043_0020841 Ga0501043_0020841_3957_5048 331
103 3300049585 Ga0501069_0191262 Ga0501069_0191262_39_1130 331
104 3300049823 Ga0501044_0031760 Ga0501044_0031760_2219_3310 331
105 3300053077 Ga0495601_0068394 Ga0495601_0068394_933_2099 331
106 iso_pu_bacteria 2870721527 2870724551 331
107 3300047445 Ga0495677_0010793 Ga0495677_0010793_1751_2932 333
108 3300015262 Ga0182007_10020678 Ga0182007_100206781 334
109 3300046691 Ga0495670_0104703 Ga0495670_0104703_294_1427 334
110 3300047318 Ga0495636_0000785 Ga0495636_0000785_6512_7645 334
111 3300005435 Ga0070714_100001204 Ga0070714_10000120411 337
112 3300025929 Ga0207664_10003097 Ga0207664_100030974 337
113 3300046457 Ga0495590_0000029 Ga0495590_0000029_133976_135100 337
114 3300046458 Ga0495591_000798 Ga0495591_000798_10490_11614 337
115 3300046474 Ga0495605_0003249 Ga0495605_0003249_5948_7072 337
116 3300046491 Ga0495584_0000036 Ga0495584_0000036_85125_86249 337
117 3300046491 Ga0495584_0000052 Ga0495584_0000052_64521_65645 337
118 3300046491 Ga0495584_0010731 Ga0495584_0010731_2029_3153 337
119 3300046492 Ga0495585_0051494 Ga0495585_0051494_598_1722 337
120 3300046500 Ga0495596_0013787 Ga0495596_0013787_1395_2519 337
121 3300046501 Ga0495607_0003151 Ga0495607_0003151_8053_9177 337
122 3300046506 Ga0495583_0000495 Ga0495583_0000495_7239_8363 337
123 3300046507 Ga0495606_0006232 Ga0495606_0006232_5889_7013 337
124 3300046513 Ga0495616_0028387 Ga0495616_0028387_1501_2625 337
125 3300046518 Ga0495631_0003924 Ga0495631_0003924_198_1322 337
126 3300046519 Ga0495632_0022905 Ga0495632_0022905_1384_2508 337
127 3300046520 Ga0495637_0000002 Ga0495637_0000002_578611_579735 337
128 3300046523 Ga0495644_0005445 Ga0495644_0005445_1000_2124 337
129 3300046528 Ga0495642_0001314 Ga0495642_0001314_3817_4941 337
130 3300046558 Ga0495633_0001637 Ga0495633_0001637_14747_15871 337
131 3300046616 Ga0495668_0013936 Ga0495668_0013936_898_2022 337
132 3300046648 Ga0495611_0000434 Ga0495611_0000434_12467_13591 337
133 3300046665 Ga0495661_0026604 Ga0495661_0026604_1738_2862 337
134 3300046694 Ga0495649_0000035 Ga0495649_0000035_85013_86137 337
135 3300046794 Ga0495589_0006944 Ga0495589_0006944_1130_2254 337
136 3300046810 Ga0495660_0002692 Ga0495660_0002692_5436_6560 337
137 3300047320 Ga0495672_0000056 Ga0495672_0000056_209202_210326 337
138 3300047323 Ga0495683_0000058 Ga0495683_0000058_85207_86331 337
139 3300047445 Ga0495677_0000141 Ga0495677_0000141_23517_24641 337
140 3300047446 Ga0495679_026820 Ga0495679_026820_189_1313 337
141 3300047470 Ga0495681_0004223 Ga0495681_0004223_3690_4814 337
142 3300047472 Ga0495686_0012531 Ga0495686_0012531_3839_4963 337
143 3300048091 Ga0495626_0009611 Ga0495626_0009611_1738_2862 337
144 3300049459 Ga0495678_000086 Ga0495678_000086_9422_10546 337
145 3300049460 Ga0495682_0004723 Ga0495682_0004723_277_1401 337
146 3300006048 Ga0075363_100024085 Ga0075363_1000240852 338
147 3300028794 Ga0307515_10006786 Ga0307515_100067861 338
148 3300031730 Ga0307516_10000456 Ga0307516_1000045610 338
149 3300050496 nmdc:mga07m45_27778_c1 nmdc:mga07m45_27778_c1_1784_2908 338
150 3300003320 rootH2_10071054 rootH2_100710549 339
151 3300005471 Ga0070698_100285023 Ga0070698_1002850232 339
152 3300028794 Ga0307515_10069695 Ga0307515_100696953 339
153 3300030522 Ga0307512_10115074 Ga0307512_101150742 339
154 3300031507 Ga0307509_10160395 Ga0307509_101603953 339
155 3300031730 Ga0307516_10000667 Ga0307516_1000066712 339
156 3300032126 Ga0307415_100022566 Ga0307415_1000225663 339
157 3300033179 Ga0307507_10010699 Ga0307507_100106996 339
158 3300033180 Ga0307510_10000204 Ga0307510_1000020427 339
159 3300035207 Ga0373942_0002013 Ga0373942_0002013_2861_3979 339
160 3300046507 Ga0495606_0007073 Ga0495606_0007073_4976_6124 339
161 3300048924 Ga0496121_0009448 Ga0496121_0009448_1743_2975 339
162 3300049570 Ga0501033_0011281 Ga0501033_0011281_2604_3758 339
163 3300049571 Ga0501034_0017438 Ga0501034_0017438_4388_5542 339
164 3300049572 Ga0501036_0006560 Ga0501036_0006560_6508_7662 339
165 3300049573 Ga0501037_0004875 Ga0501037_0004875_4786_5940 339
166 3300049574 Ga0501038_0118183 Ga0501038_0118183_142_1296 339
167 3300049574 Ga0501038_0146582 Ga0501038_0146582_640_1791 339
168 3300049575 Ga0501039_0009708 Ga0501039_0009708_2484_3638 339
169 3300049579 Ga0501043_0004782 Ga0501043_0004782_8741_9895 339
170 3300049581 Ga0501047_0007747 Ga0501047_0007747_4790_5944 339
171 3300049586 Ga0501070_0001340 Ga0501070_0001340_6943_8097 339
172 3300049822 Ga0501035_0033798 Ga0501035_0033798_329_1483 339
173 3300049823 Ga0501044_0050518 Ga0501044_0050518_1441_2595 339
174 3300053088 Ga0500644_0045763 Ga0500644_0045763_104_1282 339
175 iso_pu_bacteria 2751185782 2753266553 339

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF08541

ACP_syn_III_C

3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal

318

410

0.96

PF02797

Chal_sti_synt_C

Chalcone and stilbene synthases, C-terminal domain

288

410

0.91

PF08392

FAE1_CUT1_RppA

FAE1/Type III polyketide synthase-like protein

105

264

0.83

PF00195

Chal_sti_synt_N

Chalcone and stilbene synthases, N-terminal domain

51

257

0.77

Structural Annotation

Top 5 Hits

ID Description Score Start End
1u0m-assembly1.cif.gz_B crystal structure of 1,3,6,8-tetrahydroxynaphthalene synthase (thns) from streptomyces coelicolor a3(2): a bacterial type iii polyketide synthase (pks) provides insights into enzymatic control of reactive polyketide intermediates 0.8914 21 339
4jap-assembly2.cif.gz_A crystal structure of mycobacterium tuberculosis pks11 reveals intermediates in the synthesis of methyl-branched alkylpyrones 0.8902 19 339
5wx5-assembly3.cif.gz_F alkylquinolone synthase y215v mutant from evodia rutaecarpa 0.8835 18 338
4b0n-assembly1.cif.gz_B crystal structure of pks-i from the brown algae ectocarpus siliculosus 0.88 14 338
7ffi-assembly1.cif.gz_A diarylpentanoid-producing polyketide synthase (f340w mutant) 0.8771 19 338
ID Description Score Start End Superfamily
af_A0A1D6EMK3_278_426_3.40.47.10 Alpha Beta;3-Layer(aba) Sandwich;Peroxisomal Thiolase; Chain A, domain 1;Thiolase/Chalcone synthase 0.9198 295 339 3.40.47.10
4b0nB01 Alpha Beta;3-Layer(aba) Sandwich;Peroxisomal Thiolase; Chain A, domain 1;Thiolase/Chalcone synthase 0.8846 14 220 3.40.47.10
af_I1MDK4_98_235_3.40.47.10 Alpha Beta;3-Layer(aba) Sandwich;Peroxisomal Thiolase; Chain A, domain 1;Thiolase/Chalcone synthase 0.8724 84 212 3.40.47.10
1u0mB01 Alpha Beta;3-Layer(aba) Sandwich;Peroxisomal Thiolase; Chain A, domain 1;Thiolase/Chalcone synthase 0.8683 22 215 3.40.47.10
1tedA02 Alpha Beta;3-Layer(aba) Sandwich;Peroxisomal Thiolase; Chain A, domain 1;Thiolase/Chalcone synthase 0.865 220 337 3.40.47.10
ID Description Score Start End GO Terms
AF-A0A1A6BKY1-F1-model_v4 Stilbene synthase 0.9559 19 339 GO:0006633
GO:0016747
GO:0030639
AF-A0A849W6G5-F1-model_v4 Type III polyketide synthase 0.955 18 339 GO:0006633
GO:0016020
GO:0016747
GO:0030639
AF-A0A176S767-F1-model_v4 Chalcone and stilbene synthase domain protein 0.9495 21 162 GO:0006633
GO:0016020
GO:0016747
AF-A0A1D8U0H3-F1-model_v4 Type III polyketide synthase 0.9477 53 339 GO:0006633
GO:0016020
GO:0016747
GO:0030639
AF-A0A285QV04-F1-model_v4 (3,5-dihydroxycyclohex-3-enyl)acetyl-CoA synthase 0.9436 1 339 GO:0016747
GO:0030639

Feature Viewer

pLDDT pTM Quality
88.56 0.88 High
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Predicted Structure (AlphaFold2)

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