F265816

General Info

Members Datasets Scaffolds Average Seq Length
175 105 350 194

Family's Representative Sequence

Representative Sequence 3300005347|Ga0070668_100245612|Ga0070668_1002456122
Length 226
Sequence VAEHESSARSSPEQPSDAPSYLLPPATQPTEDAKDALRGRLLARRRALTAEQRTQAAEALRPHVLRWAGELPPGPAFAYLPVGAEPGSAALLDGLRAAGRSVLLPVVPELPGPLDWAPYLGQASLGPGPLGLREPTTDRLGPAALGGAAFVLVPALAVDREGHRLGRGGGYYDRTLGAVAPGTPLLALLHDGELLDAVPVDAHDHPVTGVAMPTPGIVVTGNNTRG

Samples

Sample ID Description Type Environment
1 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
2 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
3 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
4 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
5 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
6 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
7 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
8 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
9 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
10 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
11 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
12 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
13 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
14 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
15 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
16 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
17 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
18 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
19 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
20 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
21 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
22 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
23 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
24 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
25 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
26 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
27 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
28 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
29 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
30 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
37 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
38 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
39 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
40 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
41 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
42 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
43 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
44 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
45 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
46 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
47 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
48 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
49 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
50 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
51 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
52 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
53 3300035121 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_3 Metagenome Rhizosphere
54 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
55 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
56 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
57 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
58 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
59 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
60 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
61 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
62 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
63 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
64 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
65 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
66 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
67 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
68 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
69 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
70 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
71 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
72 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
73 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
74 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
75 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
76 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
77 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
78 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
79 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
80 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
81 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
82 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
83 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
84 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
85 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
86 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
87 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
88 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
89 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
90 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
91 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
92 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
93 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
94 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
95 3300053111 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 endosphere Metagenome Endosphere
96 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
97 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
98 3300053158 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere Metagenome Endosphere
99 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
100 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
101 2622736605 Geodermatophilus ruber DSM 45317 Isolate Rhizosphere
102 2738541274 Mycobacterium sp. YR708 Isolate Unclassified
103 2738543028 Mycobacterium sp. YR782 Isolate Unclassified
104 2902799365 Mycolicibacterium sp. P1-5 Isolate Unclassified
105 8054472261 Pseudonocardia terrae RS11V-5 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 97.14
Metatranscriptomes 0
Isolates 2.86

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 16
Nodule 0
Rhizoplane 2.86
Rhizosphere 73.14
Stem 0
Stem Tuber 0
Unclassified 1.71

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070668_100245612 3300005347 Bacteria 1484
2 Ga0070683_100276271 3300005329 Bacteria 1598
3 Ga0070683_100294788 3300005329 Bacteria 1543
4 Ga0070680_100037046 3300005336 Bacteria 3941
5 Ga0070682_100094566 3300005337 Bacteria 1961
6 Ga0070671_100001093 3300005355 Bacteria 20090
7 Ga0070671_100318458 3300005355 Bacteria 1325
8 Ga0070659_100152986 3300005366 Bacteria 1883
9 Ga0070663_100352616 3300005455 Bacteria 1192
10 Ga0070663_100375240 3300005455 Bacteria 1157
11 Ga0070679_100154039 3300005530 Bacteria 2274
12 Ga0070679_101313333 3300005530 Bacteria 669
13 Ga0068853_100469084 3300005539 Bacteria 1186
14 Ga0070693_100398892 3300005547 Bacteria 953
15 Ga0070665_100002749 3300005548 Bacteria 19068
16 Ga0070702_100389631 3300005615 Bacteria 993
17 Ga0068864_100591213 3300005618 Bacteria 1076
18 Ga0068863_100090758 3300005841 Bacteria 2897
19 Ga0068863_100243205 3300005841 Bacteria 1737
20 Ga0068860_100009645 3300005843 Bacteria 9594
21 Ga0070717_10399309 3300006028 Bacteria 1235
22 Ga0075365_10204219 3300006038 Bacteria 1385
23 Ga0075365_10273747 3300006038 Bacteria 1188
24 Ga0075365_10600238 3300006038 Bacteria 778
25 Ga0075368_10065520 3300006042 Bacteria 1460
26 Ga0075368_10089444 3300006042 Bacteria 1259
27 Ga0075363_100163170 3300006048 Bacteria 1262
28 Ga0075363_100476102 3300006048 Bacteria 740
29 Ga0075364_10049698 3300006051 Bacteria 2736
30 Ga0075364_10116154 3300006051 Bacteria 1789
31 Ga0075364_10179435 3300006051 Bacteria 1432
32 Ga0075369_10110520 3300006186 Bacteria 1238
33 Ga0075370_10006396 3300006353 Bacteria 5920
34 Ga0075431_100016810 3300006847 Bacteria 7431
35 Ga0157369_10516139 3300013105 Bacteria 1236
36 Ga0157372_11195345 3300013307 Bacteria 879
37 Ga0163163_10465666 3300014325 Bacteria 1324
38 Ga0157379_10001442 3300014968 Bacteria 19518
39 Ga0209051_1016430 3300025303 Bacteria 3349
40 Ga0207660_10106371 3300025917 Bacteria 2104
41 Ga0207652_10689380 3300025921 Bacteria 912
42 Ga0207652_10838022 3300025921 Bacteria 815
43 Ga0207644_10000226 3300025931 Bacteria 38864
44 Ga0207690_10277777 3300025932 Bacteria 1304
45 Ga0207661_10253548 3300025944 Bacteria 1565
46 Ga0207661_10335965 3300025944 Bacteria 1361
47 Ga0207668_10363926 3300025972 Bacteria 1213
48 Ga0207678_10179938 3300026067 Bacteria 1805
49 Ga0207678_10390436 3300026067 Bacteria 1204
50 Ga0207702_10769264 3300026078 Bacteria 951
51 Ga0207641_10001255 3300026088 Bacteria 25261
52 Ga0207641_10040410 3300026088 Bacteria 3906
53 Ga0207676_10193377 3300026095 Bacteria 1792
54 Ga0268264_10010361 3300028381 Bacteria 7709
55 Ga0307408_100552606 3300031548 Bacteria 1016
56 Ga0316578_10072292 3300031728 Bacteria 2043
57 Ga0307405_10070268 3300031731 Bacteria 2248
58 Ga0307405_10102196 3300031731 Bacteria 1925
59 Ga0307405_10165666 3300031731 Bacteria 1571
60 Ga0307413_10622726 3300031824 Unclassified 886
61 Ga0307413_10862778 3300031824 Bacteria 766
62 Ga0307410_10222937 3300031852 Bacteria 1451
63 Ga0307410_10357817 3300031852 Bacteria 1168
64 Ga0307410_10594605 3300031852 Unclassified 922
65 Ga0307406_10073938 3300031901 Bacteria 2242
66 Ga0307406_10409234 3300031901 Bacteria 1077
67 Ga0307406_10501518 3300031901 Bacteria 984
68 Ga0307407_10028680 3300031903 Bacteria 2979
69 Ga0307407_10050454 3300031903 Bacteria 2381
70 Ga0307407_10173197 3300031903 Bacteria 1423
71 Ga0307407_10519583 3300031903 Bacteria 875
72 Ga0307412_10180349 3300031911 Bacteria 1588
73 Ga0307412_10329065 3300031911 Bacteria 1219
74 Ga0307409_100043055 3300031995 Bacteria 3386
75 Ga0307409_100112660 3300031995 Bacteria 2284
76 Ga0307409_100181001 3300031995 Bacteria 1866
77 Ga0307409_100700066 3300031995 Bacteria 1012
78 Ga0307409_100708853 3300031995 Unclassified 1006
79 Ga0307416_100043034 3300032002 Bacteria 3532
80 Ga0307416_100086141 3300032002 Bacteria 2677
81 Ga0307416_100162290 3300032002 Bacteria 2067
82 Ga0307416_100242141 3300032002 Bacteria 1749
83 Ga0307416_100288606 3300032002 Bacteria 1623
84 Ga0307416_100345038 3300032002 Bacteria 1504
85 Ga0307416_100432519 3300032002 Bacteria 1364
86 Ga0307416_100485544 3300032002 Bacteria 1296
87 Ga0307416_100676748 3300032002 Bacteria 1119
88 Ga0307416_101239178 3300032002 Bacteria 852
89 Ga0307414_10042276 3300032004 Bacteria 3095
90 Ga0307414_10292255 3300032004 Bacteria 1374
91 Ga0307414_10788030 3300032004 Bacteria 866
92 Ga0307411_10130611 3300032005 Bacteria 1835
93 Ga0307411_10164322 3300032005 Bacteria 1667
94 Ga0307411_10410732 3300032005 Bacteria 1122
95 Ga0307411_10605532 3300032005 Bacteria 943
96 Ga0307415_100078294 3300032126 Bacteria 2351
97 Ga0307415_100256352 3300032126 Bacteria 1424
98 Ga0307415_100392325 3300032126 Bacteria 1182
99 Ga0307415_100442822 3300032126 Bacteria 1121
100 Ga0373960_0366814 3300035121 Bacteria 549
101 Ga0316584_0216584 3300036712 Bacteria 1408
102 Ga0395899_0262498 3300037312 Bacteria 1181
103 Ga0395900_0060881 3300037418 Bacteria 3883
104 Ga0395898_0050175 3300037466 Bacteria 4085
105 Ga0395901_0007866 3300038443 Bacteria 10751
106 Ga0466965_0002173 3300044683 Bacteria 8248
107 Ga0466966_0076482 3300044684 Bacteria 2090
108 Ga0466961_0089668 3300044693 Bacteria 1942
109 Ga0466961_0106766 3300044693 Bacteria 1762
110 Ga0466961_0135765 3300044693 Bacteria 1541
111 Ga0466963_0032561 3300044694 Bacteria 3377
112 Ga0466963_0091097 3300044694 Bacteria 2076
113 Ga0466963_0277316 3300044694 Bacteria 1178
114 Ga0466963_0371698 3300044694 Bacteria 1007
115 Ga0466964_0041774 3300044706 Bacteria 1856
116 Ga0466971_0140011 3300044719 Bacteria 1126
117 Ga0466970_0110914 3300044765 Bacteria 1498
118 Ga0466957_0181594 3300044842 Bacteria 1374
119 Ga0466957_0223036 3300044842 Bacteria 1245
120 Ga0466960_0003977 3300044901 Bacteria 5742
121 Ga0466960_0024553 3300044901 Bacteria 2721
122 Ga0466960_0048140 3300044901 Bacteria 2048
123 Ga0466960_0481647 3300044901 Bacteria 725
124 Ga0466960_0584935 3300044901 Bacteria 661
125 Ga0466959_0098526 3300045049 Bacteria 2094
126 Ga0466959_0676049 3300045049 Bacteria 692
127 Ga0466967_0016493 3300045976 Bacteria 5828
128 Ga0466967_0018926 3300045976 Bacteria 5523
129 Ga0466967_0034218 3300045976 Bacteria 4310
130 Ga0466967_0129324 3300045976 Bacteria 2343
131 Ga0466967_0519775 3300045976 Bacteria 1170
132 Ga0466967_0628920 3300045976 Bacteria 1060
133 Ga0495638_0022641 3300046460 Bacteria 4122
134 Ga0496100_0003405 3300048903 Bacteria 8289
135 Ga0496101_0024463 3300048904 Bacteria 4180
136 Ga0496102_0000048 3300048905 Bacteria 179713
137 Ga0496103_0000018 3300048906 Bacteria 239585
138 Ga0496110_0282075 3300048913 Bacteria 1513
139 Ga0496116_0000197 3300048919 Bacteria 120256
140 Ga0496117_0000879 3300048920 Bacteria 46401
141 Ga0496117_0102360 3300048920 Bacteria 1808
142 Ga0496118_0000172 3300048921 Bacteria 116150
143 Ga0496119_0006809 3300048922 Bacteria 10476
144 Ga0496120_0004144 3300048923 Bacteria 12471
145 Ga0496121_0073350 3300048924 Bacteria 2743
146 Ga0496124_0004707 3300048927 Bacteria 15754
147 Ga0496125_0017704 3300048928 Bacteria 6782
148 Ga0496126_0001988 3300048929 Bacteria 28981
149 Ga0496126_0120027 3300048929 Bacteria 2281
150 Ga0501042_0231030 3300049578 Bacteria 1334
151 Ga0501067_0126514 3300049583 Bacteria 1422
152 Ga0501069_0238009 3300049585 Bacteria 1061
153 Ga0501073_0259830 3300049589 Bacteria 1198
154 nmdc:mga03n38_18532_c1 3300050490 Bacteria 2750
155 nmdc:mga00v17_18889_c1 3300050491 Bacteria 3924
156 nmdc:mga00v17_469741_c1 3300050491 Bacteria 816
157 nmdc:mga0yw44_261920_c1 3300050492 Bacteria 1152
158 nmdc:mga0yw44_372174_c1 3300050492 Bacteria 964
159 nmdc:mga0yw44_77680_c1 3300050492 Bacteria 2074
160 nmdc:mga07m45_36143_c1 3300050496 Bacteria 2750
161 nmdc:mga0sz30_107674_c1 3300050516 Bacteria 1220
162 nmdc:mga0sz30_23837_c1 3300050516 Bacteria 1374
163 Ga0500578_0359534 3300053086 Bacteria 849
164 Ga0500572_141083 3300053111 Bacteria 785
165 Ga0500608_051802 3300053122 Bacteria 1972
166 Ga0500652_257760 3300053131 Bacteria 688
167 Ga0500627_0001152 3300053158 Bacteria 7250
168 Ga0500645_000412 3300053730 Bacteria 29924
169 Ga0466962_0004482 3300061719 Bacteria 6693
170 Ga0466962_0046209 3300061719 Bacteria 2080
171 2623499138 2622736605 Bacteria 4992138
172 2738707028 2738541274 Bacteria 6909446
173 2739333732 2738543028 Bacteria 6917070
174 2902800513 2902799365 Bacteria 5419524
175 8054478953 8054472261 Bacteria 7464355
176 Ga0070668_100245612
177 Ga0070683_100276271
178 Ga0070683_100294788
179 Ga0070680_100037046
180 Ga0070682_100094566
181 Ga0070671_100001093
182 Ga0070671_100318458
183 Ga0070659_100152986
184 Ga0070663_100352616
185 Ga0070663_100375240
186 Ga0070679_100154039
187 Ga0070679_101313333
188 Ga0068853_100469084
189 Ga0070693_100398892
190 Ga0070665_100002749
191 Ga0070702_100389631
192 Ga0068864_100591213
193 Ga0068863_100090758
194 Ga0068863_100243205
195 Ga0068860_100009645
196 Ga0070717_10399309
197 Ga0075365_10204219
198 Ga0075365_10273747
199 Ga0075365_10600238
200 Ga0075368_10065520
201 Ga0075368_10089444
202 Ga0075363_100163170
203 Ga0075363_100476102
204 Ga0075364_10049698
205 Ga0075364_10116154
206 Ga0075364_10179435
207 Ga0075369_10110520
208 Ga0075370_10006396
209 Ga0075431_100016810
210 Ga0157369_10516139
211 Ga0157372_11195345
212 Ga0163163_10465666
213 Ga0157379_10001442
214 Ga0209051_1016430
215 Ga0207660_10106371
216 Ga0207652_10689380
217 Ga0207652_10838022
218 Ga0207644_10000226
219 Ga0207690_10277777
220 Ga0207661_10253548
221 Ga0207661_10335965
222 Ga0207668_10363926
223 Ga0207678_10179938
224 Ga0207678_10390436
225 Ga0207702_10769264
226 Ga0207641_10001255
227 Ga0207641_10040410
228 Ga0207676_10193377
229 Ga0268264_10010361
230 Ga0307408_100552606
231 Ga0316578_10072292
232 Ga0307405_10070268
233 Ga0307405_10102196
234 Ga0307405_10165666
235 Ga0307413_10622726
236 Ga0307413_10862778
237 Ga0307410_10222937
238 Ga0307410_10357817
239 Ga0307410_10594605
240 Ga0307406_10073938
241 Ga0307406_10409234
242 Ga0307406_10501518
243 Ga0307407_10028680
244 Ga0307407_10050454
245 Ga0307407_10173197
246 Ga0307407_10519583
247 Ga0307412_10180349
248 Ga0307412_10329065
249 Ga0307409_100043055
250 Ga0307409_100112660
251 Ga0307409_100181001
252 Ga0307409_100700066
253 Ga0307409_100708853
254 Ga0307416_100043034
255 Ga0307416_100086141
256 Ga0307416_100162290
257 Ga0307416_100242141
258 Ga0307416_100288606
259 Ga0307416_100345038
260 Ga0307416_100432519
261 Ga0307416_100485544
262 Ga0307416_100676748
263 Ga0307416_101239178
264 Ga0307414_10042276
265 Ga0307414_10292255
266 Ga0307414_10788030
267 Ga0307411_10130611
268 Ga0307411_10164322
269 Ga0307411_10410732
270 Ga0307411_10605532
271 Ga0307415_100078294
272 Ga0307415_100256352
273 Ga0307415_100392325
274 Ga0307415_100442822
275 Ga0373960_0366814
276 Ga0316584_0216584
277 Ga0395899_0262498
278 Ga0395900_0060881
279 Ga0395898_0050175
280 Ga0395901_0007866
281 Ga0466965_0002173
282 Ga0466966_0076482
283 Ga0466961_0089668
284 Ga0466961_0106766
285 Ga0466961_0135765
286 Ga0466963_0032561
287 Ga0466963_0091097
288 Ga0466963_0277316
289 Ga0466963_0371698
290 Ga0466964_0041774
291 Ga0466971_0140011
292 Ga0466970_0110914
293 Ga0466957_0181594
294 Ga0466957_0223036
295 Ga0466960_0003977
296 Ga0466960_0024553
297 Ga0466960_0048140
298 Ga0466960_0481647
299 Ga0466960_0584935
300 Ga0466959_0098526
301 Ga0466959_0676049
302 Ga0466967_0016493
303 Ga0466967_0018926
304 Ga0466967_0034218
305 Ga0466967_0129324
306 Ga0466967_0519775
307 Ga0466967_0628920
308 Ga0495638_0022641
309 Ga0496100_0003405
310 Ga0496101_0024463
311 Ga0496102_0000048
312 Ga0496103_0000018
313 Ga0496110_0282075
314 Ga0496116_0000197
315 Ga0496117_0000879
316 Ga0496117_0102360
317 Ga0496118_0000172
318 Ga0496119_0006809
319 Ga0496120_0004144
320 Ga0496121_0073350
321 Ga0496124_0004707
322 Ga0496125_0017704
323 Ga0496126_0001988
324 Ga0496126_0120027
325 Ga0501042_0231030
326 Ga0501067_0126514
327 Ga0501069_0238009
328 Ga0501073_0259830
329 nmdc:mga03n38_18532_c1
330 nmdc:mga00v17_18889_c1
331 nmdc:mga00v17_469741_c1
332 nmdc:mga0yw44_261920_c1
333 nmdc:mga0yw44_372174_c1
334 nmdc:mga0yw44_77680_c1
335 nmdc:mga07m45_36143_c1
336 nmdc:mga0sz30_107674_c1
337 nmdc:mga0sz30_23837_c1
338 Ga0500578_0359534
339 Ga0500572_141083
340 Ga0500608_051802
341 Ga0500652_257760
342 Ga0500627_0001152
343 Ga0500645_000412
344 Ga0466962_0004482
345 Ga0466962_0046209
346 2623499138
347 2738707028
348 2739333732
349 2902800513
350 8054478953

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01812

5-FTHF_cyc-lig

5-formyltetrahydrofolate cyclo-ligase family

34

213

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
2jcb-assembly2.cif.gz_B the crystal structure of 5-formyl-tetrahydrofolate cycloligase from bacillus anthracis (ba4489) 0.8409 5 183
1wkc-assembly1.cif.gz_A crystal structure of a 5-formyltetrahydrofolate cycloligase-related protein from thermus thermophilus hb8 0.8303 11 185
1wkc-assembly1.cif.gz_A crystal structure of a 5-formyltetrahydrofolate cycloligase-related protein from thermus thermophilus hb8 0.8078 11 185
3hy6-assembly1.cif.gz_A structure of human mthfs with adp 0.7976 7 175
2jcb-assembly2.cif.gz_B the crystal structure of 5-formyl-tetrahydrofolate cycloligase from bacillus anthracis (ba4489) 0.792 5 183
ID Description Score Start End Superfamily
af_O05575_1_191_3.40.50.10420 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NagB/RpiA/CoA transferase-like 0.886 11 182 3.40.50.10420
af_Q8L539_52_266_3.40.50.10420 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NagB/RpiA/CoA transferase-like 0.8522 7 179 3.40.50.10420
2jcbB00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NagB/RpiA/CoA transferase-like 0.8409 5 183 3.40.50.10420
1wkcA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NagB/RpiA/CoA transferase-like 0.828 11 185 3.40.50.10420
1wkcA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NagB/RpiA/CoA transferase-like 0.8099 11 185 3.40.50.10420
ID Description Score Start End GO Terms
AF-A0A6J4JF20-F1-model_v4 5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2) 0.9753 51 184 GO:0005524
GO:0009396
GO:0030272
GO:0035999
GO:0046872
AF-A0A4Y9N603-F1-model_v4 5-formyltetrahydrofolate cyclo-ligase 0.9662 105 184 GO:0005524
GO:0009396
GO:0030272
GO:0035999
AF-A0A7G1I4G4-F1-model_v4 5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2) 0.9661 90 184 GO:0005524
GO:0009396
GO:0030272
GO:0035999
GO:0046872
AF-A0A6V8L6C9-F1-model_v4 5-formyltetrahydrofolate cyclo-ligase 0.9643 86 184 GO:0005524
GO:0009396
GO:0030272
GO:0035999
AF-A0A7K3WGW2-F1-model_v4 5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2) 0.9642 3 186 GO:0005524
GO:0009396
GO:0030272
GO:0035999
GO:0046872

Map