F261239

General Info

Members Datasets Scaffolds Average Seq Length
172 85 172 159

Family's Representative Sequence

Representative Sequence 3300044712|Ga0453684_0312415|Ga0453684_0312415_563_1129
Length 188
Sequence VVNGKDFHFDSISGYFGLYFTARRYNSGMTAPKLTHIDETGHACMVDVAGKDDTERIAIAKGEIVMKPETLALIRAGLIKKGDVLTVAQVAGIMAAKKTSELIPLCHPIPLTKVDVDLAPDESLPGVRITATAKTIGKTGVEMEALTAVSVAALTVYDMAKAAEKTMKIQNIRLVEKHGGRSGDVVNE

Samples

Sample ID Description Type Environment
1 2162886006 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v1 Metagenome Rhizosphere
2 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
3 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
4 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
5 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
6 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
7 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
8 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
9 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
10 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
11 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
12 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
13 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
14 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
15 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
16 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
17 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
18 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
19 3300006194 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 Metagenome Rhizosphere
20 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
21 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
22 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
23 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
24 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
25 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
26 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
27 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
28 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
29 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
30 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
31 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
32 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
37 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
38 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
39 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
40 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
41 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
42 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
43 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
44 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
45 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
46 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
47 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
48 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
49 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
50 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
51 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
52 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
53 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
54 3300032168 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
55 3300034817 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_1 Metagenome Rhizosphere
56 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
57 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
58 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
59 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
60 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
61 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
62 3300037588 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA Metagenome Rhizosphere
63 3300038725 Seagrass microbial communities from Seahorse Key, FL, USA - HV0818 Metagenome Unclassified
64 3300039093 Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 Metagenome Unclassified
65 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
66 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
67 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
68 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
69 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
70 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
71 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
72 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
73 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
74 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
75 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
76 3300049665 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H4_A_2_drought Metagenome Rhizosphere
77 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
78 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
79 3300049772 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E11_B_4_control Metagenome Rhizosphere
80 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
81 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
82 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
83 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
84 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
85 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.42
Metatranscriptomes 0.58
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 1.16
Rhizosphere 97.09
Stem 0
Stem Tuber 0
Unclassified 1.74

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 SwRhRL3b_contig_15384 2162886006 Bacteria 1282
2 SwRhRL2b_contig_1345736 2162886007 Bacteria 6811
3 JGI25406J46586_10001061 3300003203 Bacteria 12887
4 Ga0065707_10000514 3300005295 Bacteria 27365
5 Ga0065707_10004859 3300005295 Bacteria 3253
6 Ga0065707_10083758 3300005295 Bacteria 8309
7 Ga0070680_100249072 3300005336 Bacteria 1502
8 Ga0070680_101073732 3300005336 Unclassified 696
9 Ga0070689_100052585 3300005340 Unclassified 3151
10 Ga0070688_100867616 3300005365 Unclassified 710
11 Ga0070706_100045153 3300005467 Bacteria 4070
12 Ga0070707_100452863 3300005468 Unclassified 1244
13 Ga0070699_100004362 3300005518 Bacteria 12496
14 Ga0070695_100946565 3300005545 Bacteria 698
15 Ga0070695_101673364 3300005545 Bacteria 532
16 Ga0070696_100367906 3300005546 Bacteria 1117
17 Ga0070704_100120904 3300005549 Unclassified 2012
18 Ga0068857_100798474 3300005577 Bacteria 901
19 Ga0070702_100148629 3300005615 Bacteria 1501
20 Ga0068861_100053708 3300005719 Unclassified 3067
21 Ga0068862_100042554 3300005844 Bacteria 3869
22 Ga0068862_100881568 3300005844 Bacteria 879
23 Ga0081539_10001766 3300005985 Bacteria 34456
24 Ga0075427_10001777 3300006194 Unclassified 2815
25 Ga0075428_100096493 3300006844 Unclassified 3222
26 Ga0075430_100395054 3300006846 Unclassified 1141
27 Ga0075431_100023749 3300006847 Bacteria 6276
28 Ga0075433_10103036 3300006852 Unclassified 2528
29 Ga0075434_100013981 3300006871 Bacteria 7660
30 Ga0075429_100018406 3300006880 Bacteria 6052
31 Ga0075429_100034770 3300006880 Bacteria 4380
32 Ga0075429_100064393 3300006880 Unclassified 3193
33 Ga0075429_100080590 3300006880 Bacteria 2838
34 Ga0075429_100293053 3300006880 Bacteria 1425
35 Ga0105247_10805100 3300009101 Bacteria 717
36 Ga0114129_10040716 3300009147 Bacteria 6549
37 Ga0114129_10092979 3300009147 Unclassified 4178
38 Ga0114129_10098896 3300009147 Bacteria 4038
39 Ga0105243_10322123 3300009148 Bacteria 1409
40 Ga0105243_11615569 3300009148 Bacteria 675
41 Ga0105241_10317287 3300009174 Bacteria 1342
42 Ga0105249_10081621 3300009553 Unclassified 3006
43 Ga0157380_10376860 3300014326 Bacteria 1338
44 Ga0207684_10090930 3300025910 Bacteria 2601
45 Ga0207660_10160950 3300025917 Unclassified 1732
46 Ga0207660_11370787 3300025917 Unclassified 573
47 Ga0207646_10063435 3300025922 Bacteria 3299
48 Ga0207646_11040376 3300025922 Unclassified 722
49 Ga0207709_10792046 3300025935 Unclassified 765
50 Ga0207674_10223789 3300026116 Bacteria 1830
51 Ga0207675_100354953 3300026118 Unclassified 1437
52 Ga0268265_11289385 3300028380 Bacteria 730
53 Ga0265323_10118472 3300028653 Bacteria 864
54 Ga0265322_10051546 3300028654 Bacteria 1168
55 Ga0265339_10297530 3300031249 Bacteria 770
56 Ga0265327_10007037 3300031251 Bacteria 8817
57 Ga0265316_10507140 3300031344 Bacteria 861
58 Ga0265313_10095417 3300031595 Bacteria 1328
59 Ga0316579_10061061 3300031691 Bacteria 1774
60 Ga0316576_10065325 3300031727 Bacteria 2674
61 Ga0316576_10250088 3300031727 Bacteria 1331
62 Ga0316578_10232238 3300031728 Bacteria 1108
63 Ga0307405_10325600 3300031731 Bacteria 1176
64 Ga0316577_10075459 3300031733 Bacteria 1882
65 Ga0316577_10091278 3300031733 Unclassified 1705
66 Ga0316577_10155039 3300031733 Bacteria 1291
67 Ga0307413_10276833 3300031824 Bacteria 1260
68 Ga0307415_100037743 3300032126 Bacteria 3178
69 Ga0316583_10087834 3300032133 Bacteria 1085
70 Ga0316585_10031643 3300032137 Bacteria 1665
71 Ga0316585_10051473 3300032137 Bacteria 1323
72 Ga0316593_10002094 3300032168 Bacteria 4634
73 Ga0373948_0094397 3300034817 Bacteria 698
74 Ga0316574_0328516 3300035398 Bacteria 970
75 Ga0316582_0058406 3300036647 Bacteria 2466
76 Ga0316582_0154618 3300036647 Bacteria 1552
77 Ga0316582_0274776 3300036647 Bacteria 1156
78 Ga0316582_0342185 3300036647 Bacteria 1029
79 Ga0316584_0002952 3300036712 Bacteria 10932
80 Ga0316584_0035042 3300036712 Bacteria 3723
81 Ga0316584_0059784 3300036712 Unclassified 2854
82 Ga0316584_0917118 3300036712 Bacteria 589
83 Ga0395899_0027205 3300037312 Bacteria 4313
84 Ga0395900_0960895 3300037418 Bacteria 775
85 Ga0395905_0178410 3300037471 Bacteria 1994
86 Ga0316581_0112431 3300037588 Bacteria 839
87 Ga0400484_36571 3300038725 Unclassified 1336
88 Ga0400489_21639 3300039093 Bacteria 2309
89 Ga0400489_78890 3300039093 Bacteria 42123
90 Ga0451577_0037532 3300042876 Bacteria 4360
91 Ga0451577_0132972 3300042876 Bacteria 2232
92 Ga0451577_0195705 3300042876 Bacteria 1825
93 Ga0451577_0278305 3300042876 Bacteria 1516
94 Ga0451577_0553015 3300042876 Unclassified 1045
95 Ga0451577_1306481 3300042876 Bacteria 645
96 Ga0451577_1782058 3300042876 Bacteria 540
97 Ga0453683_0003101 3300044673 Bacteria 12420
98 Ga0453683_0012371 3300044673 Bacteria 5591
99 Ga0453683_0014478 3300044673 Bacteria 5118
100 Ga0453683_0074083 3300044673 Bacteria 2131
101 Ga0453683_0122447 3300044673 Bacteria 1637
102 Ga0453683_0206513 3300044673 Bacteria 1247
103 Ga0453683_0359558 3300044673 Bacteria 936
104 Ga0453683_0370476 3300044673 Bacteria 921
105 Ga0453683_0622030 3300044673 Bacteria 705
106 Ga0453684_0000106 3300044712 Bacteria 364365
107 Ga0453684_0000214 3300044712 Bacteria 251406
108 Ga0453684_0000430 3300044712 Bacteria 171415
109 Ga0453684_0000548 3300044712 Bacteria 142109
110 Ga0453684_0000588 3300044712 Bacteria 135201
111 Ga0453684_0004117 3300044712 Bacteria 31534
112 Ga0453684_0019832 3300044712 Bacteria 10201
113 Ga0453684_0031204 3300044712 Bacteria 7496
114 Ga0453684_0066429 3300044712 Bacteria 4592
115 Ga0453684_0074947 3300044712 Bacteria 4256
116 Ga0453684_0101018 3300044712 Bacteria 3530
117 Ga0453684_0145911 3300044712 Bacteria 2819
118 Ga0453684_0156684 3300044712 Bacteria 2699
119 Ga0453684_0181714 3300044712 Bacteria 2469
120 Ga0453684_0205313 3300044712 Bacteria 2294
121 Ga0453684_0237478 3300044712 Bacteria 2100
122 Ga0453684_0247921 3300044712 Unclassified 2047
123 Ga0453684_0258615 3300044712 Bacteria 1995
124 Ga0453684_0260192 3300044712 Bacteria 1988
125 Ga0453684_0281616 3300044712 Bacteria 1896
126 Ga0453684_0312415 3300044712 Bacteria 1783
127 Ga0453684_0396429 3300044712 Bacteria 1547
128 Ga0453684_0461156 3300044712 Bacteria 1413
129 Ga0453684_0559736 3300044712 Bacteria 1258
130 Ga0453684_0631751 3300044712 Bacteria 1170
131 Ga0453684_0657346 3300044712 Bacteria 1143
132 Ga0453684_0677399 3300044712 Bacteria 1123
133 Ga0453684_0880764 3300044712 Bacteria 960
134 Ga0453684_0943069 3300044712 Bacteria 921
135 Ga0453684_1092759 3300044712 Bacteria 843
136 Ga0453684_1447638 3300044712 Bacteria 711
137 Ga0453684_1627451 3300044712 Bacteria 662
138 Ga0451576_0000043 3300045051 Bacteria 335666
139 Ga0451576_0021473 3300045051 Bacteria 7016
140 Ga0451576_0034323 3300045051 Bacteria 5389
141 Ga0451576_0048351 3300045051 Bacteria 4468
142 Ga0451576_0064577 3300045051 Bacteria 3813
143 Ga0451576_0075883 3300045051 Bacteria 3498
144 Ga0451576_0227017 3300045051 Bacteria 1950
145 Ga0451576_0996006 3300045051 Bacteria 878
146 Ga0496112_0884894 3300048915 Unclassified 815
147 Ga0496113_0109523 3300048916 Unclassified 2148
148 Ga0501039_0197672 3300049575 Bacteria 1581
149 Ga0501040_1242945 3300049576 Bacteria 540
150 Ga0501072_0171992 3300049588 Bacteria 1729
151 Ga0501073_0097861 3300049589 Bacteria 2038
152 Ga0501075_0370342 3300049591 Bacteria 1092
153 Ga0501227_177729 3300049665 Bacteria 597
154 Ga0501080_0817224 3300049742 Bacteria 817
155 Ga0501081_0219386 3300049743 Bacteria 1383
156 Ga0501275_069803 3300049772 Bacteria 551
157 nmdc:mga05p37_104698_c1 3300050507 Bacteria 3481
158 nmdc:mga05p37_118910_c1 3300050507 Unclassified 3246
159 nmdc:mga05p37_14061_c1 3300050507 Bacteria 9604
160 nmdc:mga05p37_49652_c1 3300050507 Bacteria 5161
161 nmdc:mga09592_16331_c1 3300050508 Bacteria 6071
162 nmdc:mga09592_198398_c1 3300050508 Unclassified 1738
163 nmdc:mga09592_28446_c1 3300050508 Unclassified 4643
164 nmdc:mga0qj67_237971_c1 3300050509 Bacteria 1477
165 nmdc:mga0qj67_412525_c1 3300050509 Unclassified 1089
166 nmdc:mga06r32_66656_c1 3300050510 Unclassified 3474
167 nmdc:mga06r32_98559_c1 3300050510 Bacteria 2865
168 nmdc:mga0n895_211426_c1 3300050512 Unclassified 1970
169 nmdc:mga0a205_100339_c1 3300050515 Bacteria 1495
170 nmdc:mga0a205_213243_c1 3300050515 Unclassified 1818
171 nmdc:mga0a205_215071_c1 3300050515 Bacteria 1809
172 nmdc:mga0a205_50369_c1 3300050515 Bacteria 4021

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300038725 Ga0400484_36571 Ga0400484_36571_60_593 129
2 3300036647 Ga0316582_0154618 Ga0316582_0154618_285_746 134
3 3300036712 Ga0316584_0917118 Ga0316584_0917118_46_507 134
4 3300031733 Ga0316577_10155039 Ga0316577_101550393 141
5 3300032137 Ga0316585_10031643 Ga0316585_100316433 141
6 3300032168 Ga0316593_10002094 Ga0316593_100020944 141
7 3300036647 Ga0316582_0058406 Ga0316582_0058406_14_508 141
8 3300036712 Ga0316584_0035042 Ga0316584_0035042_971_1465 141
9 3300039093 Ga0400489_21639 Ga0400489_21639_507_1052 141
10 3300037418 Ga0395900_0960895 Ga0395900_0960895_20_454 144
11 3300005545 Ga0070695_100946565 Ga0070695_1009465652 145
12 3300044712 Ga0453684_0260192 Ga0453684_0260192_281_757 145
13 3300042876 Ga0451577_0278305 Ga0451577_0278305_943_1419 148
14 3300044712 Ga0453684_0101018 Ga0453684_0101018_2726_3202 148
15 3300031691 Ga0316579_10061061 Ga0316579_100610612 149
16 3300037588 Ga0316581_0112431 Ga0316581_0112431_53_562 149
17 3300039093 Ga0400489_78890 Ga0400489_78890_6333_6899 149
18 3300050515 nmdc:mga0a205_100339_c1 nmdc:mga0a205_100339_c1_885_1361 149
19 3300044712 Ga0453684_0000588 Ga0453684_0000588_118444_119013 151
20 3300049576 Ga0501040_1242945 Ga0501040_1242945_11_490 153
21 3300031733 Ga0316577_10075459 Ga0316577_100754592 157
22 3300031249 Ga0265339_10297530 Ga0265339_102975301 158
23 3300031344 Ga0265316_10507140 Ga0265316_105071402 158
24 3300031595 Ga0265313_10095417 Ga0265313_100954172 158
25 3300031727 Ga0316576_10250088 Ga0316576_102500883 158
26 3300032133 Ga0316583_10087834 Ga0316583_100878342 158
27 3300032137 Ga0316585_10051473 Ga0316585_100514733 158
28 3300036647 Ga0316582_0274776 Ga0316582_0274776_466_942 158
29 3300037312 Ga0395899_0027205 Ga0395899_0027205_996_1472 158
30 3300037471 Ga0395905_0178410 Ga0395905_0178410_197_673 158
31 3300042876 Ga0451577_0037532 Ga0451577_0037532_2865_3341 158
32 3300042876 Ga0451577_0132972 Ga0451577_0132972_755_1231 158
33 3300042876 Ga0451577_1306481 Ga0451577_1306481_92_568 158
34 3300042876 Ga0451577_1782058 Ga0451577_1782058_17_493 158
35 3300044673 Ga0453683_0003101 Ga0453683_0003101_8585_9061 158
36 3300044673 Ga0453683_0014478 Ga0453683_0014478_1086_1562 158
37 3300044673 Ga0453683_0074083 Ga0453683_0074083_934_1410 158
38 3300044673 Ga0453683_0122447 Ga0453683_0122447_258_734 158
39 3300044673 Ga0453683_0206513 Ga0453683_0206513_230_709 158
40 3300044673 Ga0453683_0370476 Ga0453683_0370476_247_723 158
41 3300044712 Ga0453684_0000106 Ga0453684_0000106_193414_193890 158
42 3300044712 Ga0453684_0000214 Ga0453684_0000214_188620_189096 158
43 3300044712 Ga0453684_0000548 Ga0453684_0000548_49128_49604 158
44 3300044712 Ga0453684_0004117 Ga0453684_0004117_2566_3042 158
45 3300044712 Ga0453684_0019832 Ga0453684_0019832_4682_5158 158
46 3300044712 Ga0453684_0031204 Ga0453684_0031204_2569_3045 158
47 3300044712 Ga0453684_0066429 Ga0453684_0066429_3266_3742 158
48 3300044712 Ga0453684_0074947 Ga0453684_0074947_2480_2956 158
49 3300044712 Ga0453684_0156684 Ga0453684_0156684_1373_1849 158
50 3300044712 Ga0453684_0205313 Ga0453684_0205313_968_1444 158
51 3300044712 Ga0453684_0237478 Ga0453684_0237478_975_1451 158
52 3300044712 Ga0453684_0247921 Ga0453684_0247921_1290_1766 158
53 3300044712 Ga0453684_0281616 Ga0453684_0281616_1257_1733 158
54 3300044712 Ga0453684_0396429 Ga0453684_0396429_223_702 158
55 3300044712 Ga0453684_0657346 Ga0453684_0657346_369_845 158
56 3300044712 Ga0453684_0677399 Ga0453684_0677399_216_692 158
57 3300044712 Ga0453684_0943069 Ga0453684_0943069_323_802 158
58 3300045051 Ga0451576_0021473 Ga0451576_0021473_3128_3604 158
59 3300045051 Ga0451576_0064577 Ga0451576_0064577_712_1188 158
60 3300045051 Ga0451576_0075883 Ga0451576_0075883_2337_2813 158
61 3300045051 Ga0451576_0996006 Ga0451576_0996006_251_727 158
62 3300048915 Ga0496112_0884894 Ga0496112_0884894_325_801 158
63 3300048916 Ga0496113_0109523 Ga0496113_0109523_324_800 158
64 2162886006 SwRhRL3b_contig_15384 SwRhRL3b_0269.00001020 159
65 2162886007 SwRhRL2b_contig_1345736 SwRhRL2b_0519.00007820 159
66 3300003203 JGI25406J46586_10001061 JGI25406J46586_1000106113 159
67 3300005295 Ga0065707_10000514 Ga0065707_1000051419 159
68 3300005295 Ga0065707_10004859 Ga0065707_100048592 159
69 3300005295 Ga0065707_10083758 Ga0065707_100837586 159
70 3300005336 Ga0070680_100249072 Ga0070680_1002490723 159
71 3300005336 Ga0070680_101073732 Ga0070680_1010737321 159
72 3300005340 Ga0070689_100052585 Ga0070689_1000525853 159
73 3300005365 Ga0070688_100867616 Ga0070688_1008676161 159
74 3300005467 Ga0070706_100045153 Ga0070706_1000451531 159
75 3300005468 Ga0070707_100452863 Ga0070707_1004528631 159
76 3300005518 Ga0070699_100004362 Ga0070699_1000043627 159
77 3300005545 Ga0070695_101673364 Ga0070695_1016733641 159
78 3300005546 Ga0070696_100367906 Ga0070696_1003679062 159
79 3300005549 Ga0070704_100120904 Ga0070704_1001209041 159
80 3300005577 Ga0068857_100798474 Ga0068857_1007984741 159
81 3300005615 Ga0070702_100148629 Ga0070702_1001486291 159
82 3300005719 Ga0068861_100053708 Ga0068861_1000537082 159
83 3300005844 Ga0068862_100042554 Ga0068862_1000425544 159
84 3300005844 Ga0068862_100881568 Ga0068862_1008815682 159
85 3300005985 Ga0081539_10001766 Ga0081539_1000176615 159
86 3300006194 Ga0075427_10001777 Ga0075427_100017774 159
87 3300006844 Ga0075428_100096493 Ga0075428_1000964932 159
88 3300006846 Ga0075430_100395054 Ga0075430_1003950541 159
89 3300006847 Ga0075431_100023749 Ga0075431_1000237495 159
90 3300006852 Ga0075433_10103036 Ga0075433_101030363 159
91 3300006871 Ga0075434_100013981 Ga0075434_1000139817 159
92 3300006880 Ga0075429_100018406 Ga0075429_1000184062 159
93 3300006880 Ga0075429_100034770 Ga0075429_1000347702 159
94 3300006880 Ga0075429_100064393 Ga0075429_1000643933 159
95 3300006880 Ga0075429_100080590 Ga0075429_1000805904 159
96 3300006880 Ga0075429_100293053 Ga0075429_1002930531 159
97 3300009101 Ga0105247_10805100 Ga0105247_108051001 159
98 3300009147 Ga0114129_10040716 Ga0114129_100407162 159
99 3300009147 Ga0114129_10092979 Ga0114129_100929793 159
100 3300009147 Ga0114129_10098896 Ga0114129_100988961 159
101 3300009148 Ga0105243_10322123 Ga0105243_103221232 159
102 3300009148 Ga0105243_11615569 Ga0105243_116155692 159
103 3300009174 Ga0105241_10317287 Ga0105241_103172872 159
104 3300009553 Ga0105249_10081621 Ga0105249_100816213 159
105 3300014326 Ga0157380_10376860 Ga0157380_103768601 159
106 3300025910 Ga0207684_10090930 Ga0207684_100909302 159
107 3300025917 Ga0207660_10160950 Ga0207660_101609502 159
108 3300025917 Ga0207660_11370787 Ga0207660_113707871 159
109 3300025922 Ga0207646_10063435 Ga0207646_100634352 159
110 3300025922 Ga0207646_11040376 Ga0207646_110403761 159
111 3300025935 Ga0207709_10792046 Ga0207709_107920462 159
112 3300026116 Ga0207674_10223789 Ga0207674_102237893 159
113 3300026118 Ga0207675_100354953 Ga0207675_1003549532 159
114 3300028380 Ga0268265_11289385 Ga0268265_112893852 159
115 3300028653 Ga0265323_10118472 Ga0265323_101184722 159
116 3300028654 Ga0265322_10051546 Ga0265322_100515461 159
117 3300031251 Ga0265327_10007037 Ga0265327_100070376 159
118 3300031727 Ga0316576_10065325 Ga0316576_100653254 159
119 3300031728 Ga0316578_10232238 Ga0316578_102322383 159
120 3300031731 Ga0307405_10325600 Ga0307405_103256002 159
121 3300031733 Ga0316577_10091278 Ga0316577_100912782 159
122 3300031824 Ga0307413_10276833 Ga0307413_102768332 159
123 3300032126 Ga0307415_100037743 Ga0307415_1000377432 159
124 3300034817 Ga0373948_0094397 Ga0373948_0094397_204_683 159
125 3300035398 Ga0316574_0328516 Ga0316574_0328516_475_957 159
126 3300036647 Ga0316582_0342185 Ga0316582_0342185_136_618 159
127 3300036712 Ga0316584_0002952 Ga0316584_0002952_2937_3416 159
128 3300036712 Ga0316584_0059784 Ga0316584_0059784_2229_2711 159
129 3300042876 Ga0451577_0195705 Ga0451577_0195705_601_1080 159
130 3300042876 Ga0451577_0553015 Ga0451577_0553015_273_755 159
131 3300044673 Ga0453683_0012371 Ga0453683_0012371_4633_5115 159
132 3300044673 Ga0453683_0359558 Ga0453683_0359558_426_920 159
133 3300044673 Ga0453683_0622030 Ga0453683_0622030_189_668 159
134 3300044712 Ga0453684_0000430 Ga0453684_0000430_117460_117942 159
135 3300044712 Ga0453684_0145911 Ga0453684_0145911_1809_2291 159
136 3300044712 Ga0453684_0181714 Ga0453684_0181714_1710_2192 159
137 3300044712 Ga0453684_0258615 Ga0453684_0258615_648_1136 159
138 3300044712 Ga0453684_0312415 Ga0453684_0312415_563_1129 159
139 3300044712 Ga0453684_0461156 Ga0453684_0461156_804_1283 159
140 3300044712 Ga0453684_0559736 Ga0453684_0559736_663_1142 159
141 3300044712 Ga0453684_0631751 Ga0453684_0631751_241_729 159
142 3300044712 Ga0453684_0880764 Ga0453684_0880764_281_760 159
143 3300044712 Ga0453684_1092759 Ga0453684_1092759_255_737 159
144 3300044712 Ga0453684_1447638 Ga0453684_1447638_204_692 159
145 3300044712 Ga0453684_1627451 Ga0453684_1627451_150_632 159
146 3300045051 Ga0451576_0000043 Ga0451576_0000043_313425_313907 159
147 3300045051 Ga0451576_0034323 Ga0451576_0034323_3225_3704 159
148 3300045051 Ga0451576_0048351 Ga0451576_0048351_2759_3238 159
149 3300045051 Ga0451576_0227017 Ga0451576_0227017_458_937 159
150 3300049575 Ga0501039_0197672 Ga0501039_0197672_198_677 159
151 3300049588 Ga0501072_0171992 Ga0501072_0171992_199_684 159
152 3300049589 Ga0501073_0097861 Ga0501073_0097861_1219_1719 159
153 3300049591 Ga0501075_0370342 Ga0501075_0370342_47_526 159
154 3300049665 Ga0501227_177729 Ga0501227_177729_90_569 159
155 3300049742 Ga0501080_0817224 Ga0501080_0817224_13_492 159
156 3300049743 Ga0501081_0219386 Ga0501081_0219386_268_747 159
157 3300049772 Ga0501275_069803 Ga0501275_069803_45_524 159
158 3300050507 nmdc:mga05p37_104698_c1 nmdc:mga05p37_104698_c1_2124_2603 159
159 3300050507 nmdc:mga05p37_118910_c1 nmdc:mga05p37_118910_c1_1215_1694 159
160 3300050507 nmdc:mga05p37_14061_c1 nmdc:mga05p37_14061_c1_2102_2581 159
161 3300050507 nmdc:mga05p37_49652_c1 nmdc:mga05p37_49652_c1_3809_4288 159
162 3300050508 nmdc:mga09592_16331_c1 nmdc:mga09592_16331_c1_5246_5725 159
163 3300050508 nmdc:mga09592_198398_c1 nmdc:mga09592_198398_c1_280_759 159
164 3300050508 nmdc:mga09592_28446_c1 nmdc:mga09592_28446_c1_592_1071 159
165 3300050509 nmdc:mga0qj67_237971_c1 nmdc:mga0qj67_237971_c1_218_697 159
166 3300050509 nmdc:mga0qj67_412525_c1 nmdc:mga0qj67_412525_c1_79_558 159
167 3300050510 nmdc:mga06r32_66656_c1 nmdc:mga06r32_66656_c1_2339_2818 159
168 3300050510 nmdc:mga06r32_98559_c1 nmdc:mga06r32_98559_c1_1121_1600 159
169 3300050512 nmdc:mga0n895_211426_c1 nmdc:mga0n895_211426_c1_703_1182 159
170 3300050515 nmdc:mga0a205_213243_c1 nmdc:mga0a205_213243_c1_1120_1599 159
171 3300050515 nmdc:mga0a205_215071_c1 nmdc:mga0a205_215071_c1_1183_1662 159
172 3300050515 nmdc:mga0a205_50369_c1 nmdc:mga0a205_50369_c1_2557_3036 159

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01967

MoaC

MoaC family

45

180

1

Structural Annotation

Top 5 Hits

ID Description Score Start End
1ekr-assembly1.cif.gz_A moac protein from e. coli 0.9892 12 148
4pyd-assembly1.cif.gz_A moac in complex with cpmp crystallized in space group p212121 0.9876 16 158
4pyd-assembly1.cif.gz_D moac in complex with cpmp crystallized in space group p212121 0.9824 6 152
4fdf-assembly1.cif.gz_B structural insights into putative molybdenum cofactor biosynthesis protein c (moac2) from mycobacterium tuberculosis h37rv 0.9777 14 151
3jqk-assembly1.cif.gz_A crystal structure of the molybdenum cofactor biosynthesis protein c (ttha1789) from thermus theromophilus hb8 (h32 form) 0.975 13 158
ID Description Score Start End Superfamily
af_B4FJH5_64_220_3.30.70.640 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Molybdopterin cofactor biosynthesis C (MoaC) domain 0.9899 5 159 3.30.70.640
1ekrA00 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Molybdopterin cofactor biosynthesis C (MoaC) domain 0.9892 12 148 3.30.70.640
af_P9WJR7_13_167_3.30.70.640 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Molybdopterin cofactor biosynthesis C (MoaC) domain 0.9838 4 159 3.30.70.640
4fdfA00 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Molybdopterin cofactor biosynthesis C (MoaC) domain 0.9744 12 148 3.30.70.640
2ohdB00 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Molybdopterin cofactor biosynthesis C (MoaC) domain 0.9731 14 146 3.30.70.640
ID Description Score Start End GO Terms
AF-A0A3S1F2I2-F1-model_v4 cyclic pyranopterin monophosphate synthase (EC 4.6.1.17) 0.9999 36 157 GO:0006777
GO:0061798
GO:0061799
AF-A0A3T1CI46-F1-model_v4 cyclic pyranopterin monophosphate synthase (EC 4.6.1.17) 0.9997 16 159 GO:0006777
GO:0061799
AF-A0A7X4CJ77-F1-model_v4 Cyclic pyranopterin monophosphate synthase MoaC (EC 4.6.1.17) 0.9997 38 159 GO:0006777
GO:0061799
AF-A0A537PYN5-F1-model_v4 cyclic pyranopterin monophosphate synthase (EC 4.6.1.17) 0.9996 16 159 GO:0006777
GO:0061799
AF-A0A7Y3IVP3-F1-model_v4 cyclic pyranopterin monophosphate synthase (EC 4.6.1.17) 0.9995 16 141 GO:0006777
GO:0061799

Feature Viewer

pLDDT pTM Quality
92.79 0.87 High
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Predicted Structure (AlphaFold2)

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