F258576

General Info

Members Datasets Scaffolds Average Seq Length
171 111 342 269

Family's Representative Sequence

Representative Sequence 3300006880|Ga0075429_100020736|Ga0075429_1000207362
Length 307
Sequence MTDATAVHRTVLWPGPEPPARVTSTGVRRMRDWIALVPANPDPGLVIDVAAATVRRGQAYLLRDITWRVELDERWVVLGPNGAGKTTLLNLAGGRMHPTAGTVYVLGERVGRTDLPELRTRVGLSTIALADRIPAQEIVHDVVLTASYAVVGRSFVPAGRERYEVVDEVRARGLLDQLGVAALADRPYGTLSEGERKRVQVARALMTDPELLLLDEPAAGLDLGAREDLVRRLGELAADPDAPATVLVTHHVEEIPTGFTHALLLRDGVAVAQGLITDTVTSDHLSETFGLPLRVGYADGRFTARAV

Samples

Sample ID Description Type Environment
1 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
2 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
5 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
6 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
7 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
8 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
9 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
10 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
11 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
12 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
13 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
14 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
15 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
16 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
17 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
18 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
19 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
20 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
21 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
22 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
23 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
24 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
25 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
26 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
27 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
28 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
29 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
30 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
31 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
32 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
33 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
34 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
35 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
36 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
37 3300020081 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
38 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
54 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
55 3300030745 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 8 Metagenome Rhizosphere
56 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
57 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
58 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
59 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
60 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
61 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
62 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
63 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
64 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
65 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
66 3300042004 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 Metagenome Rhizosphere
67 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
68 3300042008 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z062817_5219 Metagenome Rhizosphere
69 3300042012 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z062817_5213 Metagenome Rhizosphere
70 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
71 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
72 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
73 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
74 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
75 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
76 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
77 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
78 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
79 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
80 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
81 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
82 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
83 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
84 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
85 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
86 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
87 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
88 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
89 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
90 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
91 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
92 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
93 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
94 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
95 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
96 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
97 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
98 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
99 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
100 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
101 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
102 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
103 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
104 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
105 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
106 3300053146 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 endosphere Metagenome Endosphere
107 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
108 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
109 2857710386 Brevibacterium sp. R-73093 Isolate Unclassified
110 2946003308 Arthrobacter agilis W3I6 Isolate Rhizosphere
111 2984592036 Aeromicrobium sp. SORGH_AS981 Isolate Aerial Root

Type Distribution

Type Percentage (%)
Metagenomes 97.08
Metatranscriptomes 1.17
Isolates 1.75

Biome Distribution

Category Percentage (%)
Aerial Root 0.58
Bulb 0
Endosphere 7.02
Nodule 0
Rhizoplane 1.17
Rhizosphere 90.64
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0075429_100020736 3300006880 Bacteria 5705
2 Ga0070658_10002742 3300005327 Bacteria 14660
3 Ga0070658_10006694 3300005327 Bacteria 9332
4 Ga0070658_10046566 3300005327 Bacteria 3509
5 Ga0070658_10430265 3300005327 Bacteria 1136
6 Ga0070683_100002715 3300005329 Bacteria 14132
7 Ga0070680_100003451 3300005336 Bacteria 11797
8 Ga0070680_100036620 3300005336 Bacteria 3964
9 Ga0070660_100068365 3300005339 Bacteria 2769
10 Ga0070660_100346080 3300005339 Bacteria 1224
11 Ga0070659_100000721 3300005366 Bacteria 23979
12 Ga0070713_100063475 3300005436 Bacteria 3097
13 Ga0070708_100077081 3300005445 Bacteria 3012
14 Ga0070681_10001232 3300005458 Bacteria 22253
15 Ga0070681_10010006 3300005458 Bacteria 9349
16 Ga0070681_10171584 3300005458 Bacteria 2091
17 Ga0070681_10511403 3300005458 Bacteria 1114
18 Ga0070707_100235867 3300005468 Bacteria 1781
19 Ga0070679_100002616 3300005530 Bacteria 16372
20 Ga0070679_100018278 3300005530 Bacteria 6799
21 Ga0070679_100217172 3300005530 Bacteria 1874
22 Ga0070679_100588772 3300005530 Bacteria 1056
23 Ga0070684_100457331 3300005535 Bacteria 1180
24 Ga0068855_100595221 3300005563 Bacteria 1193
25 Ga0070664_100280581 3300005564 Bacteria 1502
26 Ga0068852_100351522 3300005616 Bacteria 1439
27 Ga0068859_100074707 3300005617 Bacteria 3429
28 Ga0081455_10003095 3300005937 Bacteria 19370
29 Ga0081538_10036105 3300005981 Bacteria 3232
30 Ga0075365_10003257 3300006038 Bacteria 8319
31 Ga0075363_100006271 3300006048 Bacteria 5385
32 Ga0075428_100016121 3300006844 Bacteria 8260
33 Ga0075428_100305275 3300006844 Bacteria 1711
34 Ga0075430_100004276 3300006846 Bacteria 12054
35 Ga0075430_100066022 3300006846 Bacteria 3039
36 Ga0075430_100433400 3300006846 Bacteria 1085
37 Ga0075431_100002328 3300006847 Bacteria 18258
38 Ga0075431_100029166 3300006847 Bacteria 5676
39 Ga0075431_100088394 3300006847 Bacteria 3198
40 Ga0075429_100015661 3300006880 Bacteria 6570
41 Ga0075429_100016457 3300006880 Bacteria 6408
42 Ga0097620_100074705 3300006931 Bacteria 3429
43 Ga0114129_10001688 3300009147 Bacteria 30106
44 Ga0114129_10126728 3300009147 Bacteria 3510
45 Ga0114129_10131249 3300009147 Bacteria 3440
46 Ga0114129_10143448 3300009147 Bacteria 3272
47 Ga0114129_10171590 3300009147 Bacteria 2957
48 Ga0105248_10014545 3300009177 Bacteria 8661
49 Ga0105237_10130446 3300009545 Bacteria 2508
50 Ga0105238_10148225 3300009551 Bacteria 2322
51 Ga0157373_10169819 3300013100 Bacteria 1534
52 Ga0157370_10020509 3300013104 Bacteria 6600
53 Ga0157369_10003098 3300013105 Bacteria 19856
54 Ga0157369_10016862 3300013105 Bacteria 8207
55 Ga0157369_10213858 3300013105 Bacteria 2020
56 Ga0157369_10236566 3300013105 Bacteria 1908
57 Ga0157374_10216786 3300013296 Bacteria 1877
58 Ga0157372_10363944 3300013307 Bacteria 1685
59 Ga0157375_10060804 3300013308 Bacteria 3748
60 Ga0163161_10109663 3300017792 Bacteria 2062
61 Ga0206356_10145670 3300020070 Bacteria 1022
62 Ga0206354_10553858 3300020081 Bacteria 8474
63 Ga0207705_10002327 3300025909 Bacteria 14699
64 Ga0207705_10015705 3300025909 Bacteria 5436
65 Ga0207705_10250017 3300025909 Bacteria 1352
66 Ga0207705_10345926 3300025909 Bacteria 1145
67 Ga0207684_10375210 3300025910 Bacteria 1224
68 Ga0207707_10012255 3300025912 Bacteria 7452
69 Ga0207707_10189398 3300025912 Bacteria 1795
70 Ga0207707_10332925 3300025912 Bacteria 1310
71 Ga0207660_10005473 3300025917 Bacteria 8247
72 Ga0207660_10057504 3300025917 Bacteria 2786
73 Ga0207657_10051316 3300025919 Bacteria 3585
74 Ga0207657_10192691 3300025919 Bacteria 1643
75 Ga0207652_10005197 3300025921 Bacteria 10576
76 Ga0207652_10101488 3300025921 Bacteria 2541
77 Ga0207652_10497279 3300025921 Bacteria 1098
78 Ga0207700_10068298 3300025928 Bacteria 2724
79 Ga0207690_10000259 3300025932 Bacteria 38091
80 Ga0207711_10083767 3300025941 Bacteria 2790
81 Ga0207689_10037508 3300025942 Bacteria 4020
82 Ga0207661_10156648 3300025944 Bacteria 1973
83 Ga0207679_10194072 3300025945 Bacteria 1691
84 Ga0207667_10487493 3300025949 Bacteria 1251
85 Ga0207677_10431460 3300026023 Bacteria 1125
86 Ga0207698_10784590 3300026142 Bacteria 954
87 Ga0209813_10007689 3300027866 Bacteria 2693
88 Ga0265338_10010812 3300028800 Bacteria 10640
89 Ga0316182_1042494 3300030745 Bacteria 9466
90 Ga0265340_10001507 3300031247 Bacteria 13359
91 Ga0265313_10110399 3300031595 Bacteria 1210
92 Ga0265314_10053187 3300031711 Bacteria 2810
93 Ga0307409_100031403 3300031995 Bacteria 3833
94 Ga0307415_100648379 3300032126 Bacteria 946
95 Ga0373937_0023060 3300036401 Bacteria 5601
96 Ga0395900_0209470 3300037418 Bacteria 1969
97 Ga0395898_0235316 3300037466 Bacteria 1747
98 Ga0395901_0177191 3300038443 Bacteria 2236
99 Ga0439465_0057219 3300041413 Bacteria 1286
100 Ga0439465_0080446 3300041413 Bacteria 1104
101 Ga0439445_0036715 3300042004 Bacteria 1290
102 Ga0439448_0069101 3300042005 Bacteria 1175
103 Ga0439450_020226 3300042008 Bacteria 1419
104 Ga0439455_0011968 3300042012 Bacteria 1939
105 Ga0466965_0000005 3300044683 Bacteria 185168
106 Ga0466965_0215218 3300044683 Bacteria 1022
107 Ga0466966_0126103 3300044684 Bacteria 1570
108 Ga0466961_0005733 3300044693 Bacteria 7856
109 Ga0466961_0041381 3300044693 Bacteria 2954
110 Ga0466961_0067281 3300044693 Bacteria 2276
111 Ga0466961_0203450 3300044693 Bacteria 1224
112 Ga0466963_0050112 3300044694 Bacteria 2764
113 Ga0466964_0043034 3300044706 Bacteria 1831
114 Ga0466957_0006619 3300044842 Bacteria 6553
115 Ga0466959_0232682 3300045049 Bacteria 1275
116 Ga0466958_0008949 3300045836 Bacteria 5563
117 Ga0466967_0045332 3300045976 Bacteria 3820
118 Ga0466967_0255774 3300045976 Bacteria 1674
119 Ga0496110_0108143 3300048913 Bacteria 2497
120 Ga0496110_0313695 3300048913 Bacteria 1428
121 Ga0501032_0051275 3300049569 Bacteria 2782
122 Ga0501033_0024154 3300049570 Bacteria 4586
123 Ga0501033_0092168 3300049570 Bacteria 2216
124 Ga0501034_0065183 3300049571 Bacteria 3655
125 Ga0501034_0137181 3300049571 Bacteria 2427
126 Ga0501034_0214941 3300049571 Bacteria 1877
127 Ga0501037_0050705 3300049573 Bacteria 3037
128 Ga0501038_0013602 3300049574 Bacteria 7415
129 Ga0501038_0016156 3300049574 Bacteria 6772
130 Ga0501038_0222555 3300049574 Bacteria 1505
131 Ga0501042_0267611 3300049578 Bacteria 1234
132 Ga0501043_0020614 3300049579 Bacteria 5172
133 Ga0501043_0145810 3300049579 Bacteria 1854
134 Ga0501047_0604614 3300049581 Bacteria 918
135 Ga0501067_0066647 3300049583 Bacteria 1993
136 Ga0501067_0071771 3300049583 Bacteria 1918
137 Ga0501069_0034881 3300049585 Bacteria 2770
138 Ga0501070_0002329 3300049586 Bacteria 16672
139 Ga0501070_0002449 3300049586 Bacteria 16256
140 Ga0501070_0027653 3300049586 Bacteria 4757
141 Ga0501074_0006616 3300049590 Bacteria 8379
142 Ga0501074_0059647 3300049590 Bacteria 2749
143 Ga0501079_0003333 3300049741 Bacteria 11785
144 Ga0501080_0000566 3300049742 Bacteria 29247
145 Ga0501080_0018723 3300049742 Bacteria 6408
146 Ga0501080_0227006 3300049742 Bacteria 1707
147 Ga0501044_0014817 3300049823 Bacteria 8405
148 Ga0501044_0349386 3300049823 Bacteria 1399
149 Ga0501045_0036174 3300049824 Bacteria 3585
150 nmdc:mga03683_23119_c1 3300050489 Bacteria 2418
151 nmdc:mga05p37_107467_c1 3300050507 Bacteria 3433
152 nmdc:mga05p37_131598_c1 3300050507 Bacteria 3070
153 nmdc:mga05p37_79006_c1 3300050507 Bacteria 3615
154 nmdc:mga09592_230086_c1 3300050508 Bacteria 1606
155 nmdc:mga09592_325294_c1 3300050508 Bacteria 1332
156 nmdc:mga0qj67_4530_c1 3300050509 Bacteria 10068
157 nmdc:mga0qj67_58045_c1 3300050509 Bacteria 3068
158 nmdc:mga06r32_335188_c1 3300050510 Bacteria 1498
159 nmdc:mga0sz30_7287_c1 3300050516 Bacteria 4144
160 Ga0500646_0000083 3300053090 Bacteria 26729
161 Ga0500641_0001717 3300053096 Bacteria 7788
162 Ga0500568_0002954 3300053139 Bacteria 9736
163 Ga0500573_0004515 3300053140 Bacteria 7354
164 Ga0500573_0030667 3300053140 Bacteria 3101
165 Ga0500573_0045170 3300053140 Bacteria 2539
166 Ga0500588_0000313 3300053146 Bacteria 7256
167 Ga0501082_0082515 3300060353 Bacteria 2774
168 Ga0466962_0014780 3300061719 Bacteria 3762
169 2857711439 2857710386 Bacteria 3186771
170 2946004425 2946003308 Bacteria 3857229
171 2984594731 2984592036 Bacteria 3670284
172 Ga0075429_100020736
173 Ga0070658_10002742
174 Ga0070658_10006694
175 Ga0070658_10046566
176 Ga0070658_10430265
177 Ga0070683_100002715
178 Ga0070680_100003451
179 Ga0070680_100036620
180 Ga0070660_100068365
181 Ga0070660_100346080
182 Ga0070659_100000721
183 Ga0070713_100063475
184 Ga0070708_100077081
185 Ga0070681_10001232
186 Ga0070681_10010006
187 Ga0070681_10171584
188 Ga0070681_10511403
189 Ga0070707_100235867
190 Ga0070679_100002616
191 Ga0070679_100018278
192 Ga0070679_100217172
193 Ga0070679_100588772
194 Ga0070684_100457331
195 Ga0068855_100595221
196 Ga0070664_100280581
197 Ga0068852_100351522
198 Ga0068859_100074707
199 Ga0081455_10003095
200 Ga0081538_10036105
201 Ga0075365_10003257
202 Ga0075363_100006271
203 Ga0075428_100016121
204 Ga0075428_100305275
205 Ga0075430_100004276
206 Ga0075430_100066022
207 Ga0075430_100433400
208 Ga0075431_100002328
209 Ga0075431_100029166
210 Ga0075431_100088394
211 Ga0075429_100015661
212 Ga0075429_100016457
213 Ga0097620_100074705
214 Ga0114129_10001688
215 Ga0114129_10126728
216 Ga0114129_10131249
217 Ga0114129_10143448
218 Ga0114129_10171590
219 Ga0105248_10014545
220 Ga0105237_10130446
221 Ga0105238_10148225
222 Ga0157373_10169819
223 Ga0157370_10020509
224 Ga0157369_10003098
225 Ga0157369_10016862
226 Ga0157369_10213858
227 Ga0157369_10236566
228 Ga0157374_10216786
229 Ga0157372_10363944
230 Ga0157375_10060804
231 Ga0163161_10109663
232 Ga0206356_10145670
233 Ga0206354_10553858
234 Ga0207705_10002327
235 Ga0207705_10015705
236 Ga0207705_10250017
237 Ga0207705_10345926
238 Ga0207684_10375210
239 Ga0207707_10012255
240 Ga0207707_10189398
241 Ga0207707_10332925
242 Ga0207660_10005473
243 Ga0207660_10057504
244 Ga0207657_10051316
245 Ga0207657_10192691
246 Ga0207652_10005197
247 Ga0207652_10101488
248 Ga0207652_10497279
249 Ga0207700_10068298
250 Ga0207690_10000259
251 Ga0207711_10083767
252 Ga0207689_10037508
253 Ga0207661_10156648
254 Ga0207679_10194072
255 Ga0207667_10487493
256 Ga0207677_10431460
257 Ga0207698_10784590
258 Ga0209813_10007689
259 Ga0265338_10010812
260 Ga0316182_1042494
261 Ga0265340_10001507
262 Ga0265313_10110399
263 Ga0265314_10053187
264 Ga0307409_100031403
265 Ga0307415_100648379
266 Ga0373937_0023060
267 Ga0395900_0209470
268 Ga0395898_0235316
269 Ga0395901_0177191
270 Ga0439465_0057219
271 Ga0439465_0080446
272 Ga0439445_0036715
273 Ga0439448_0069101
274 Ga0439450_020226
275 Ga0439455_0011968
276 Ga0466965_0000005
277 Ga0466965_0215218
278 Ga0466966_0126103
279 Ga0466961_0005733
280 Ga0466961_0041381
281 Ga0466961_0067281
282 Ga0466961_0203450
283 Ga0466963_0050112
284 Ga0466964_0043034
285 Ga0466957_0006619
286 Ga0466959_0232682
287 Ga0466958_0008949
288 Ga0466967_0045332
289 Ga0466967_0255774
290 Ga0496110_0108143
291 Ga0496110_0313695
292 Ga0501032_0051275
293 Ga0501033_0024154
294 Ga0501033_0092168
295 Ga0501034_0065183
296 Ga0501034_0137181
297 Ga0501034_0214941
298 Ga0501037_0050705
299 Ga0501038_0013602
300 Ga0501038_0016156
301 Ga0501038_0222555
302 Ga0501042_0267611
303 Ga0501043_0020614
304 Ga0501043_0145810
305 Ga0501047_0604614
306 Ga0501067_0066647
307 Ga0501067_0071771
308 Ga0501069_0034881
309 Ga0501070_0002329
310 Ga0501070_0002449
311 Ga0501070_0027653
312 Ga0501074_0006616
313 Ga0501074_0059647
314 Ga0501079_0003333
315 Ga0501080_0000566
316 Ga0501080_0018723
317 Ga0501080_0227006
318 Ga0501044_0014817
319 Ga0501044_0349386
320 Ga0501045_0036174
321 nmdc:mga03683_23119_c1
322 nmdc:mga05p37_107467_c1
323 nmdc:mga05p37_131598_c1
324 nmdc:mga05p37_79006_c1
325 nmdc:mga09592_230086_c1
326 nmdc:mga09592_325294_c1
327 nmdc:mga0qj67_4530_c1
328 nmdc:mga0qj67_58045_c1
329 nmdc:mga06r32_335188_c1
330 nmdc:mga0sz30_7287_c1
331 Ga0500646_0000083
332 Ga0500641_0001717
333 Ga0500568_0002954
334 Ga0500573_0004515
335 Ga0500573_0030667
336 Ga0500573_0045170
337 Ga0500588_0000313
338 Ga0501082_0082515
339 Ga0466962_0014780
340 2857711439
341 2946004425
342 2984594731

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00005

ABC_tran

ABC transporter

62

219

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
2ihy-assembly1.cif.gz_B structure of the staphylococcus aureus putative atpase subunit of an atp-binding cassette (abc) transporter 0.876 12 255
2ihy-assembly1.cif.gz_A structure of the staphylococcus aureus putative atpase subunit of an atp-binding cassette (abc) transporter 0.852 12 255
4yer-assembly1.cif.gz_B crystal structure of an abc transporter atp-binding protein (tm_1403) from thermotoga maritima msb8 at 2.35 a resolution 0.8489 12 227
5x40-assembly1.cif.gz_B structure of a cbio dimer bound with amppcp 0.8422 19 236
5x41-assembly2.cif.gz_D 3.5a resolution structure of a cobalt energy-coupling factor transporter using lcp method-cbimqo 0.8392 19 236
ID Description Score Start End Superfamily
af_I6YF11_12_276_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9128 9 253 3.40.50.300
af_Q2FWA1_1_260_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.8768 9 254 3.40.50.300
af_A0A1D6KPM2_510_779_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.8731 19 232 3.40.50.300
af_P33360_1_239_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.8709 19 229 3.40.50.300
af_Q2FW34_4_263_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.8635 19 235 3.40.50.300
ID Description Score Start End GO Terms
AF-A0A7X7JY88-F1-model_v4 ABC transporter ATP-binding protein 0.9846 150 255 GO:0005524
AF-A0A7X7JY88-F1-model_v4 ABC transporter ATP-binding protein 0.9665 150 255 GO:0005524
AF-A0A0D8HIP8-F1-model_v4 Putative ABC transporter ATP-binding protein YlmA (EC 3.6.3.-) 0.9387 7 256 GO:0005524
GO:0016887
AF-A0A1P8NG10-F1-model_v4 ABC transporter ATP-binding protein 0.9387 161 259
AF-A0A5M3XXF9-F1-model_v4 Iron ABC transporter ATP-binding protein 0.9383 9 255 GO:0005524
GO:0016887

Map