F258329

General Info

Members Datasets Scaffolds Average Seq Length
171 126 342 521

Family's Representative Sequence

Representative Sequence 3300005539|Ga0068853_100055540|Ga0068853_1000555402
Length 513
Sequence MADEKIEKAPDAHPEWKPSFNPWLIAFSVMLATVMEVLDTSVANVALPHIAGNLSATPEEATWVLTSYLISNAIILPATNWISSYVGRKRFLIICIIIFTLASALCGAAPNLEILILARILQGMGGGALQPIAQSVLLESFPPAKRGAAMAVYGMGIVVAPIIGPALGGWITDNYSWRWIFYINLPIGALAAFMANAFVEDPPYVKNQKPGSIDYLGFGLMALGLGALELTLDLGQQRDWFESDLIKFTAFVSAMSIISFIFWELYVDEPIVNLRVFLNRNFAVGCALIASVGVVLYGSTALLPLFLQTLLGYSAMESGLAVSPRGVDSRYLITFGFVVLSVSIWMFTGINLYIAQGNIQIPMIISGFAMGFVFVPLTTMTMSTLPNEQIGNASGIYNLMRNTGGSVGIAVMTTLLTRNMQIHTNDLMANINDYSIAFRQTFDQIYNGYLPMFGTETARQMAFAAINGMVAAQASVLAYIDDFRILTALCILCIPAGFLFKAVRHAKPVEGAH

Samples

Sample ID Description Type Environment
1 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
2 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
3 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
4 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
5 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
6 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
7 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
8 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
9 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
10 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
11 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
12 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
13 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
14 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
15 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
16 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
17 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
18 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
19 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
20 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
21 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
22 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
23 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
24 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
25 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
26 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
27 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
28 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
29 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
30 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
31 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
32 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
33 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
34 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
35 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
36 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
37 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
38 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
39 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
40 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
41 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
42 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
43 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
44 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
45 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
46 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
47 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
48 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
49 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
50 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
51 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
52 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
53 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
54 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
55 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
56 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
57 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
58 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
59 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
60 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
61 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
62 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
63 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
64 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
65 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300027512 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
98 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
99 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
100 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
101 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
102 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
103 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
104 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
105 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
106 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
107 3300038996 Genetically engineered switchgrass root microbial communities from Knoxville, USA - plot19 Metagenome Rhizosphere
108 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
109 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
110 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
111 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
112 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
113 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
114 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
115 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
116 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
117 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
118 3300049663 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought Metagenome Rhizosphere
119 3300049668 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_B_2_drought Metagenome Rhizosphere
120 3300049707 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B5_B_2_drought Metagenome Rhizosphere
121 3300049759 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C13_A_4_drought Metagenome Rhizosphere
122 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
123 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
124 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
125 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
126 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.58
Nodule 0
Rhizoplane 2.34
Rhizosphere 94.15
Stem 0
Stem Tuber 0
Unclassified 7.02

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0068853_100055540 3300005539 Bacteria 3413
2 Ga0065714_10064428 3300005288 Bacteria 144890
3 Ga0065712_10000115 3300005290 Bacteria 144502
4 Ga0070658_10091256 3300005327 Bacteria 2510
5 Ga0070683_100134374 3300005329 Bacteria 2342
6 Ga0070670_100032138 3300005331 Bacteria 4520
7 Ga0070670_100132959 3300005331 Bacteria 2149
8 Ga0068869_100032180 3300005334 Bacteria 3694
9 Ga0070680_100000192 3300005336 Bacteria 39491
10 Ga0070680_100045958 3300005336 Bacteria 3551
11 Ga0070682_100004462 3300005337 Bacteria 7770
12 Ga0070660_100055859 3300005339 Bacteria 3053
13 Ga0070671_100033414 3300005355 Unclassified 4254
14 Ga0070673_100026796 3300005364 Bacteria 4262
15 Ga0070667_100017707 3300005367 Bacteria 5904
16 Ga0070667_100032217 3300005367 Bacteria 4372
17 Ga0070703_10010773 3300005406 Bacteria 2579
18 Ga0070705_100006925 3300005440 Bacteria 5569
19 Ga0070694_100012377 3300005444 Bacteria 5302
20 Ga0070708_100002415 3300005445 Bacteria 14482
21 Ga0070708_100075010 3300005445 Bacteria 3052
22 Ga0070678_100041865 3300005456 Unclassified 3251
23 Ga0070662_100071573 3300005457 Bacteria 2557
24 Ga0070681_10017443 3300005458 Bacteria 7176
25 Ga0070681_10048656 3300005458 Bacteria 4236
26 Ga0070681_10075172 3300005458 Bacteria 3338
27 Ga0068867_100062773 3300005459 Bacteria 2761
28 Ga0070706_100003670 3300005467 Bacteria 15027
29 Ga0070707_100049026 3300005468 Bacteria 4047
30 Ga0070707_100227540 3300005468 Bacteria 1816
31 Ga0070698_100085661 3300005471 Bacteria 3137
32 Ga0070699_100001192 3300005518 Bacteria 24008
33 Ga0070699_100026286 3300005518 Bacteria 5021
34 Ga0070679_100000028 3300005530 Bacteria 113940
35 Ga0070679_100017195 3300005530 Bacteria 6996
36 Ga0070684_100116777 3300005535 Bacteria 2397
37 Ga0070695_100016379 3300005545 Bacteria 4484
38 Ga0070696_100088934 3300005546 Bacteria 2196
39 Ga0070693_100023738 3300005547 Bacteria 3282
40 Ga0070693_100090110 3300005547 Bacteria 1847
41 Ga0070665_100110621 3300005548 Bacteria 2750
42 Ga0068857_100002023 3300005577 Bacteria 16447
43 Ga0070702_100034227 3300005615 Bacteria 2799
44 Ga0068852_100076885 3300005616 Bacteria 2948
45 Ga0068859_100027449 3300005617 Bacteria 5709
46 Ga0068859_100264373 3300005617 Bacteria 1812
47 Ga0068864_100020440 3300005618 Bacteria 5539
48 Ga0068864_100035600 3300005618 Bacteria 4239
49 Ga0068863_100178644 3300005841 Bacteria 2037
50 Ga0068858_100048434 3300005842 Bacteria 3938
51 Ga0068858_100103282 3300005842 Unclassified 2659
52 Ga0070717_10056379 3300006028 Bacteria 3246
53 Ga0070715_10000019 3300006163 Bacteria 122990
54 Ga0068871_100036390 3300006358 Unclassified 3919
55 Ga0075433_10028603 3300006852 Bacteria 4740
56 Ga0075433_10167919 3300006852 Bacteria 1953
57 Ga0075434_100069368 3300006871 Bacteria 3515
58 Ga0075434_100193449 3300006871 Bacteria 2055
59 Ga0068865_100101907 3300006881 Bacteria 2103
60 Ga0075436_100003530 3300006914 Bacteria 10723
61 Ga0097620_100027446 3300006931 Bacteria 5709
62 Ga0097620_100264375 3300006931 Bacteria 1812
63 Ga0099794_10029473 3300007265 Unclassified 2557
64 Ga0105240_10025315 3300009093 Bacteria 7800
65 Ga0114129_10129632 3300009147 Bacteria 3466
66 Ga0105243_10005039 3300009148 Bacteria 10366
67 Ga0105242_10000911 3300009176 Bacteria 23009
68 Ga0105242_10218315 3300009176 Bacteria 1703
69 Ga0105248_10052871 3300009177 Unclassified 4558
70 Ga0105248_10226685 3300009177 Bacteria 2104
71 Ga0105237_10003576 3300009545 Bacteria 18405
72 Ga0105237_10105016 3300009545 Bacteria 2816
73 Ga0105249_10172891 3300009553 Bacteria 2096
74 Ga0105239_10072023 3300010375 Bacteria 3798
75 Ga0157373_10029184 3300013100 Bacteria 3976
76 Ga0157369_10133061 3300013105 Bacteria 2634
77 Ga0157374_10000216 3300013296 Bacteria 53208
78 Ga0163162_10001573 3300013306 Bacteria 21327
79 Ga0163162_10062611 3300013306 Bacteria 3761
80 Ga0157372_10132354 3300013307 Bacteria 2870
81 Ga0157375_10093812 3300013308 Bacteria 3068
82 Ga0163163_10003746 3300014325 Bacteria 12946
83 Ga0163163_10026229 3300014325 Bacteria 5567
84 Ga0163163_10045761 3300014325 Bacteria 4297
85 Ga0163163_10164453 3300014325 Bacteria 2265
86 Ga0157376_10000416 3300014969 Bacteria 27769
87 Ga0157376_10066451 3300014969 Bacteria 3048
88 Ga0157376_10093512 3300014969 Bacteria 2610
89 Ga0213876_10000017 3300021384 Bacteria 297728
90 Ga0213876_10000053 3300021384 Bacteria 142404
91 Ga0207697_10002345 3300025315 Bacteria 9863
92 Ga0207685_10000021 3300025905 Bacteria 131248
93 Ga0207645_10004999 3300025907 Bacteria 9714
94 Ga0207684_10002702 3300025910 Bacteria 17713
95 Ga0207684_10059992 3300025910 Unclassified 3230
96 Ga0207684_10099516 3300025910 Unclassified 2484
97 Ga0207707_10000014 3300025912 Bacteria 261972
98 Ga0207707_10014199 3300025912 Bacteria 6939
99 Ga0207707_10021248 3300025912 Bacteria 5673
100 Ga0207707_10043269 3300025912 Bacteria 3929
101 Ga0207707_10075894 3300025912 Bacteria 2933
102 Ga0207695_10017082 3300025913 Bacteria 8459
103 Ga0207671_10013386 3300025914 Bacteria 6534
104 Ga0207660_10002507 3300025917 Bacteria 12067
105 Ga0207660_10071188 3300025917 Bacteria 2529
106 Ga0207652_10000220 3300025921 Bacteria 60440
107 Ga0207652_10030641 3300025921 Bacteria 4506
108 Ga0207694_10003087 3300025924 Bacteria 13331
109 Ga0207650_10040940 3300025925 Bacteria 3393
110 Ga0207650_10118806 3300025925 Bacteria 2056
111 Ga0207644_10013922 3300025931 Bacteria 5374
112 Ga0207690_10019725 3300025932 Bacteria 4156
113 Ga0207709_10001999 3300025935 Bacteria 13240
114 Ga0207670_10046955 3300025936 Bacteria 2872
115 Ga0207665_10006436 3300025939 Bacteria 7791
116 Ga0207665_10061853 3300025939 Bacteria 2539
117 Ga0207691_10015091 3300025940 Bacteria 7350
118 Ga0207711_10064535 3300025941 Unclassified 3163
119 Ga0207689_10046869 3300025942 Bacteria 3571
120 Ga0207679_10039780 3300025945 Bacteria 3361
121 Ga0207658_10062264 3300025986 Bacteria 2792
122 Ga0207703_10022479 3300026035 Bacteria 4947
123 Ga0207703_10081215 3300026035 Unclassified 2702
124 Ga0207639_10018311 3300026041 Bacteria 4977
125 Ga0207708_10073705 3300026075 Bacteria 2617
126 Ga0207648_10054607 3300026089 Bacteria 3489
127 Ga0207676_10015142 3300026095 Bacteria 5562
128 Ga0207674_10002642 3300026116 Bacteria 22397
129 Ga0207675_100120517 3300026118 Bacteria 2482
130 Ga0207683_10062232 3300026121 Unclassified 3287
131 Ga0207698_10059019 3300026142 Bacteria 2977
132 Ga0209179_1001199 3300027512 Bacteria 3081
133 Ga0268264_10048356 3300028381 Bacteria 3538
134 Ga0265319_1000727 3300028563 Bacteria 21568
135 Ga0265334_10016038 3300028573 Bacteria 3102
136 Ga0265318_10016412 3300028577 Bacteria 3060
137 Ga0265336_10000493 3300028666 Bacteria 23115
138 Ga0265338_10000797 3300028800 Bacteria 53302
139 Ga0265338_10002370 3300028800 Bacteria 28416
140 Ga0265320_10000652 3300031240 Bacteria 26514
141 Ga0265320_10012023 3300031240 Bacteria 5064
142 Ga0265316_10012785 3300031344 Bacteria 7500
143 Ga0265316_10115709 3300031344 Bacteria 2027
144 Ga0373937_0054647 3300036401 Unclassified 3665
145 Ga0395905_0060314 3300037471 Bacteria 3547
146 Ga0395901_0191495 3300038443 Bacteria 2145
147 Ga0242420_013065 3300038996 Bacteria 1411
148 Ga0436365_0873465 3300039437 Bacteria 246686
149 Ga0436365_0924676 3300039437 Bacteria 448697
150 Ga0436365_1597051 3300039437 Bacteria 2755
151 Ga0451577_0125109 3300042876 Bacteria 2304
152 Ga0453684_0129927 3300044712 Bacteria 3024
153 Ga0451576_0062881 3300045051 Bacteria 3869
154 Ga0495658_0042627 3300046683 Bacteria 2535
155 Ga0495600_0044984 3300046809 Bacteria 2880
156 Ga0496102_0220844 3300048905 Bacteria 1786
157 Ga0496109_0021717 3300048912 Bacteria 5680
158 Ga0496113_0028641 3300048916 Bacteria 4009
159 Ga0496113_0110543 3300048916 Bacteria 2139
160 Ga0501047_0149152 3300049581 Bacteria 2215
161 Ga0501223_006160 3300049663 Bacteria 2490
162 Ga0501233_006382 3300049668 Bacteria 2213
163 Ga0501234_004422 3300049707 Bacteria 2211
164 Ga0501262_004126 3300049759 Bacteria 1677
165 nmdc:mga06r32_308336_c1 3300050510 Bacteria 1568
166 nmdc:mga0n895_240029_c1 3300050512 Bacteria 1839
167 nmdc:mga08x19_2693_c1 3300050514 Bacteria 10740
168 nmdc:mga0a205_174960_c1 3300050515 Bacteria 2042
169 nmdc:mga0a205_1965_c1 3300050515 Bacteria 17905
170 nmdc:mga0a205_21463_c1 3300050515 Bacteria 6109
171 Ga0500616_0006034 3300053153 Bacteria 8053
172 Ga0068853_100055540
173 Ga0065714_10064428
174 Ga0065712_10000115
175 Ga0070658_10091256
176 Ga0070683_100134374
177 Ga0070670_100032138
178 Ga0070670_100132959
179 Ga0068869_100032180
180 Ga0070680_100000192
181 Ga0070680_100045958
182 Ga0070682_100004462
183 Ga0070660_100055859
184 Ga0070671_100033414
185 Ga0070673_100026796
186 Ga0070667_100017707
187 Ga0070667_100032217
188 Ga0070703_10010773
189 Ga0070705_100006925
190 Ga0070694_100012377
191 Ga0070708_100002415
192 Ga0070708_100075010
193 Ga0070678_100041865
194 Ga0070662_100071573
195 Ga0070681_10017443
196 Ga0070681_10048656
197 Ga0070681_10075172
198 Ga0068867_100062773
199 Ga0070706_100003670
200 Ga0070707_100049026
201 Ga0070707_100227540
202 Ga0070698_100085661
203 Ga0070699_100001192
204 Ga0070699_100026286
205 Ga0070679_100000028
206 Ga0070679_100017195
207 Ga0070684_100116777
208 Ga0070695_100016379
209 Ga0070696_100088934
210 Ga0070693_100023738
211 Ga0070693_100090110
212 Ga0070665_100110621
213 Ga0068857_100002023
214 Ga0070702_100034227
215 Ga0068852_100076885
216 Ga0068859_100027449
217 Ga0068859_100264373
218 Ga0068864_100020440
219 Ga0068864_100035600
220 Ga0068863_100178644
221 Ga0068858_100048434
222 Ga0068858_100103282
223 Ga0070717_10056379
224 Ga0070715_10000019
225 Ga0068871_100036390
226 Ga0075433_10028603
227 Ga0075433_10167919
228 Ga0075434_100069368
229 Ga0075434_100193449
230 Ga0068865_100101907
231 Ga0075436_100003530
232 Ga0097620_100027446
233 Ga0097620_100264375
234 Ga0099794_10029473
235 Ga0105240_10025315
236 Ga0114129_10129632
237 Ga0105243_10005039
238 Ga0105242_10000911
239 Ga0105242_10218315
240 Ga0105248_10052871
241 Ga0105248_10226685
242 Ga0105237_10003576
243 Ga0105237_10105016
244 Ga0105249_10172891
245 Ga0105239_10072023
246 Ga0157373_10029184
247 Ga0157369_10133061
248 Ga0157374_10000216
249 Ga0163162_10001573
250 Ga0163162_10062611
251 Ga0157372_10132354
252 Ga0157375_10093812
253 Ga0163163_10003746
254 Ga0163163_10026229
255 Ga0163163_10045761
256 Ga0163163_10164453
257 Ga0157376_10000416
258 Ga0157376_10066451
259 Ga0157376_10093512
260 Ga0213876_10000017
261 Ga0213876_10000053
262 Ga0207697_10002345
263 Ga0207685_10000021
264 Ga0207645_10004999
265 Ga0207684_10002702
266 Ga0207684_10059992
267 Ga0207684_10099516
268 Ga0207707_10000014
269 Ga0207707_10014199
270 Ga0207707_10021248
271 Ga0207707_10043269
272 Ga0207707_10075894
273 Ga0207695_10017082
274 Ga0207671_10013386
275 Ga0207660_10002507
276 Ga0207660_10071188
277 Ga0207652_10000220
278 Ga0207652_10030641
279 Ga0207694_10003087
280 Ga0207650_10040940
281 Ga0207650_10118806
282 Ga0207644_10013922
283 Ga0207690_10019725
284 Ga0207709_10001999
285 Ga0207670_10046955
286 Ga0207665_10006436
287 Ga0207665_10061853
288 Ga0207691_10015091
289 Ga0207711_10064535
290 Ga0207689_10046869
291 Ga0207679_10039780
292 Ga0207658_10062264
293 Ga0207703_10022479
294 Ga0207703_10081215
295 Ga0207639_10018311
296 Ga0207708_10073705
297 Ga0207648_10054607
298 Ga0207676_10015142
299 Ga0207674_10002642
300 Ga0207675_100120517
301 Ga0207683_10062232
302 Ga0207698_10059019
303 Ga0209179_1001199
304 Ga0268264_10048356
305 Ga0265319_1000727
306 Ga0265334_10016038
307 Ga0265318_10016412
308 Ga0265336_10000493
309 Ga0265338_10000797
310 Ga0265338_10002370
311 Ga0265320_10000652
312 Ga0265320_10012023
313 Ga0265316_10012785
314 Ga0265316_10115709
315 Ga0373937_0054647
316 Ga0395905_0060314
317 Ga0395901_0191495
318 Ga0242420_013065
319 Ga0436365_0873465
320 Ga0436365_0924676
321 Ga0436365_1597051
322 Ga0451577_0125109
323 Ga0453684_0129927
324 Ga0451576_0062881
325 Ga0495658_0042627
326 Ga0495600_0044984
327 Ga0496102_0220844
328 Ga0496109_0021717
329 Ga0496113_0028641
330 Ga0496113_0110543
331 Ga0501047_0149152
332 Ga0501223_006160
333 Ga0501233_006382
334 Ga0501234_004422
335 Ga0501262_004126
336 nmdc:mga06r32_308336_c1
337 nmdc:mga0n895_240029_c1
338 nmdc:mga08x19_2693_c1
339 nmdc:mga0a205_174960_c1
340 nmdc:mga0a205_1965_c1
341 nmdc:mga0a205_21463_c1
342 Ga0500616_0006034

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF07690

MFS_1

Major Facilitator Superfamily

29

409

0.88

PF00083

Sugar_tr

Sugar (and other) transporter

25

209

0.81

PF06609

TRI12

Fungal trichothecene efflux pump (TRI12)

10

317

0.78

Structural Annotation

Top 5 Hits

ID Description Score Start End
7y58-assembly1.cif.gz_A cryoem structure of qaca (d411n), an antibacterial efflux transporter from staphylococcus aureus 0.8201 16 525
7y58-assembly1.cif.gz_A cryoem structure of qaca (d411n), an antibacterial efflux transporter from staphylococcus aureus 0.8156 16 525
6oom-assembly2.cif.gz_A-2 protein a 0.8073 31 496
8ex4-assembly1.cif.gz_A human s1p transporter spns2 in an inward-facing open conformation (state 1) 0.807 30 518
6euq-assembly1.cif.gz_A mdfa(q131r/l339e) 0.8067 32 496
ID Description Score Start End Superfamily
af_Q04301_34_211_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9627 29 207 1.20.1250.20
af_Q04301_34_211_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9574 29 207 1.20.1250.20
af_P9WG87_21_208_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9555 35 224 1.20.1250.20
af_Q2G2W1_141_346_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9484 34 236 1.20.1250.20
af_P9WJX3_18_194_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9429 31 207 1.20.1250.20
ID Description Score Start End GO Terms
AF-A0A538CW67-F1-model_v4 MFS transporter 0.9474 30 210 GO:0016020
GO:0022857
AF-A0A7Y4YP82-F1-model_v4 MFS transporter 0.9348 31 217 GO:0005886
GO:0022857
AF-A0A529T0H6-F1-model_v4 deleted 0.9327 58 210
AF-A0A7V9D126-F1-model_v4 MFS transporter 0.9299 30 217 GO:0005886
GO:0022857
AF-A0A0F4Z2X5-F1-model_v4 Bcmfs1, multidrug efflux transporter 0.9225 31 318 GO:0005886
GO:0022857

Map