F257493

General Info

Members Datasets Scaffolds Average Seq Length
170 137 340 345

Family's Representative Sequence

Representative Sequence 3300048912|Ga0496109_0067896|Ga0496109_0067896_306_1412
Length 368
Sequence MHATPATFQSQMNAMSPQIVIAGRKVGPDQPPYVIAEISGNHNGDLNRAISIIEAAKEAGADAVKLQTYTPDTITIDHDGPGFVVEGGLWHGRSLYDLYRWAQTPWEWHAALFARAREIGVTIFSSAFSESAVELLESLQAPAYKIASLEIVDLPLIRRVAATGKPVILSTGAAALGDIAEAVAVARDAGCGQLALLKCTSGYPTPPTESNLRTIPHLAAAFGTVVGLSDHTLGVAVPVTSIAFGASLIEKHVTLARADGGPDADFSLEPNELARMVKDCRTAWEALGRVTYELAPSELPASSLRRSLYAVADIAAGEVINETNVRSIRPGYGLPPKHLPSILGKVARHAIPRGRPLRWSDIDFDAPA

Samples

Sample ID Description Type Environment
1 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
2 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
3 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
4 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
5 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
6 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
7 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
8 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
9 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
10 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
11 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
12 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
13 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
14 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
15 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
16 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
17 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
18 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
19 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
20 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
21 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
22 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
23 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
24 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
25 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
26 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
27 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
28 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
29 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
30 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
31 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
32 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
33 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
34 3300030745 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 8 Metagenome Rhizosphere
35 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
36 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
37 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
38 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
39 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
40 3300031838 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM Metagenome Unclassified
41 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
42 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
43 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
44 3300034818 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_3 Metagenome Rhizosphere
45 3300034957 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_2 Metagenome Rhizosphere
46 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
47 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
48 3300035115 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_11 Metagenome Rhizosphere
49 3300035207 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 Metagenome Rhizosphere
50 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
51 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
52 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
53 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
54 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
55 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
56 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
57 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
58 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
59 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
60 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
61 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
62 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
63 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
64 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
65 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
66 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
67 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
68 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
69 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
70 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
71 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
72 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
73 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
74 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
75 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
76 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
77 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
78 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
79 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
80 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
81 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
82 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
83 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
84 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
85 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
86 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
87 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
88 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
89 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
90 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
91 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
92 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
93 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
94 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
95 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
96 3300053099 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 endosphere Metagenome Endosphere
97 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
98 3300053155 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 endosphere Metagenome Endosphere
99 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
100 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
101 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
102 2585427649 Amycolatopsis japonica MG417-CF17, DSM 44213 Isolate Unclassified
103 2643221619 Agromyces sp. Root81 Isolate Unclassified
104 2675903060 Nonomuraea wenchangensis CGMCC 4.5598 Isolate Rhizosphere
105 2772190715 Micromonospora chokoriensis NRRL B-24750 Isolate Unclassified
106 2791354901 Actinophytocola xanthii 11-183 Isolate Rhizosphere
107 2816332119 Kribbella amoyensis DSM 24683 Isolate Rhizosphere
108 2831935698 Jishengella sp. AZ1-13 Isolate Unclassified
109 2832004796 Micromonospora endophytica JCM 18317 Isolate Unclassified
110 2855670206 Micromonospora noduli Lupac 07 Isolate Nodule
111 2855676851 Micromonospora saelicesensis GAR05 Isolate Unclassified
112 2857288857 Micromonospora noduli ONO23 Isolate Unclassified
113 2858848962 Micromonospora saelicesensis GAR06 Isolate Unclassified
114 2858882152 Micromonospora noduli MED15 Isolate Nodule
115 2858888857 Micromonospora saelicesensis Lupac 06 Isolate Unclassified
116 2858895516 Micromonospora saelicesensis PSN13 Isolate Unclassified
117 2866065130 Micromonospora endophytica DSM 45430 Isolate Unclassified
118 2866612099 Amycolatopsis suaedae 8-3EHSu Isolate Unclassified
119 2867302475 Micromonospora globbae WPS1-2 Isolate Unclassified
120 2867312974 Micromonospora musae NGC1-4 Isolate Unclassified
121 2867319477 Micromonospora musae MS1-9 Isolate Unclassified
122 2867507094 Micromonospora zingiberis PLAI 1-1 Isolate Unclassified
123 2869048445 Micromonospora saelicesensis PSN01 Isolate Unclassified
124 2869061728 Micromonospora noduli ONO86 Isolate Unclassified
125 2869068681 Micromonospora noduli GUI43 Isolate Unclassified
126 2880489317 Micromonospora ureilytica DSM 101692 Isolate Unclassified
127 2880495981 Micromonospora vinacea DSM 101695 Isolate Unclassified
128 2915768154 Amycolatopsis pittospori PIP199 Isolate Unclassified
129 2917736166 Amycolatopsis dendrobii DR6-1 Isolate Unclassified
130 2929219909 Micromonospora sp. R-75348 Hybrid assembly Isolate Unclassified
131 2929226422 Micromonospora sp. R-74116 Hybrid assembly Isolate Unclassified
132 3002998708 Actinomadura barringtoniae GKU 128 Isolate Unclassified
133 8003830390 Micromonospora parastrephiae STR1_7 Isolate Rhizosphere
134 8003870546 Micromonospora tarensis STR1s_6 Isolate Rhizosphere
135 8054704163 Micromonospora trifolii NIE79 Isolate Nodule
136 8054727385 Micromonospora alfalfae MED01 Isolate Nodule
137 8054734606 Micromonospora hortensis NIE111 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 78.82
Metatranscriptomes 0
Isolates 21.18

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 5.29
Nodule 2.94
Rhizoplane 5.29
Rhizosphere 60.59
Stem 0
Stem Tuber 0
Unclassified 3.53

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0496109_0067896 3300048912 Bacteria 3267
2 JGI25406J46586_10003464 3300003203 Bacteria 7416
3 Ga0070658_10077199 3300005327 Bacteria 2732
4 Ga0070666_10003009 3300005335 Bacteria 10223
5 Ga0070668_100001353 3300005347 Bacteria 17531
6 Ga0070711_100357847 3300005439 Bacteria 1175
7 Ga0070708_100006059 3300005445 Bacteria 9617
8 Ga0070679_100171263 3300005530 Bacteria 2144
9 Ga0070697_100001456 3300005536 Bacteria 18032
10 Ga0068853_100292307 3300005539 Bacteria 1504
11 Ga0068858_100024537 3300005842 Bacteria 5618
12 Ga0068860_100075028 3300005843 Bacteria 3217
13 Ga0081455_10170135 3300005937 Bacteria 1661
14 Ga0081540_1011518 3300005983 Bacteria 5908
15 Ga0081539_10000177 3300005985 Bacteria 149939
16 Ga0081539_10002088 3300005985 Bacteria 29851
17 Ga0081539_10004279 3300005985 Bacteria 16013
18 Ga0081539_10131705 3300005985 Bacteria 1227
19 Ga0070717_10022872 3300006028 Unclassified 4945
20 Ga0075428_100008673 3300006844 Bacteria 11275
21 Ga0068865_100011826 3300006881 Bacteria 5474
22 Ga0105245_10134225 3300009098 Bacteria 2324
23 Ga0209148_1000564 3300025254 Bacteria 34794
24 Ga0209455_1000640 3300025272 Bacteria 21474
25 Ga0207680_10043958 3300025903 Unclassified 2623
26 Ga0207650_10150040 3300025925 Bacteria 1839
27 Ga0207704_10007454 3300025938 Bacteria 5171
28 Ga0207668_10004972 3300025972 Bacteria 7822
29 Ga0207668_10013888 3300025972 Bacteria 4973
30 Ga0207658_10051988 3300025986 Bacteria 3022
31 Ga0207703_10139927 3300026035 Bacteria 2099
32 Ga0207639_10265267 3300026041 Bacteria 1504
33 Ga0207675_100215707 3300026118 Bacteria 1848
34 Ga0268264_10083380 3300028381 Bacteria 2738
35 Ga0307515_10014706 3300028794 Bacteria 14485
36 Ga0307515_10125119 3300028794 Bacteria 2879
37 Ga0265338_10001753 3300028800 Bacteria 34268
38 Ga0307512_10003327 3300030522 Bacteria 18860
39 Ga0307512_10005213 3300030522 Bacteria 13700
40 Ga0307512_10025506 3300030522 Bacteria 5235
41 Ga0316182_1192976 3300030745 Bacteria 6245
42 Ga0307513_10011076 3300031456 Bacteria 11244
43 Ga0307509_10245095 3300031507 Bacteria 1581
44 Ga0307508_10002281 3300031616 Bacteria 20405
45 Ga0307508_10003754 3300031616 Bacteria 15184
46 Ga0307508_10083329 3300031616 Bacteria 2780
47 Ga0265314_10077857 3300031711 Bacteria 2198
48 Ga0265314_10089674 3300031711 Bacteria 2005
49 Ga0307516_10000020 3300031730 Bacteria 195931
50 Ga0307516_10005848 3300031730 Bacteria 14574
51 Ga0307516_10020231 3300031730 Bacteria 6879
52 Ga0307518_10000334 3300031838 Bacteria 35392
53 Ga0307409_100062179 3300031995 Bacteria 2922
54 Ga0307416_100315692 3300032002 Bacteria 1562
55 Ga0307507_10028390 3300033179 Bacteria 5965
56 Ga0307507_10238619 3300033179 Bacteria 1193
57 Ga0373950_0001032 3300034818 Bacteria 3548
58 Ga0373938_0016474 3300034957 Bacteria 1444
59 Ga0373951_0000021 3300035091 Bacteria 62834
60 Ga0373932_0024984 3300035112 Bacteria 1613
61 Ga0373941_0013019 3300035115 Bacteria 2190
62 Ga0373942_0000213 3300035207 Bacteria 15160
63 Ga0373962_0012891 3300035242 Bacteria 2110
64 Ga0373937_0000154 3300036401 Bacteria 66722
65 Ga0395900_0014504 3300037418 Bacteria 8041
66 Ga0395898_0042352 3300037466 Bacteria 4493
67 Ga0436364_1414098 3300037853 Bacteria 2008
68 Ga0395901_0079446 3300038443 Bacteria 3425
69 Ga0395901_0251759 3300038443 Bacteria 1840
70 Ga0451853_1424406 3300041512 Bacteria 1905
71 Ga0451577_0168023 3300042876 Bacteria 1976
72 Ga0466966_0158835 3300044684 Bacteria 1377
73 Ga0453684_0017023 3300044712 Bacteria 11292
74 Ga0466968_0080019 3300044735 Bacteria 1434
75 Ga0495672_0006950 3300047320 Bacteria 8612
76 Ga0495672_0144256 3300047320 Bacteria 1240
77 Ga0496104_0000829 3300048907 Bacteria 26651
78 Ga0496104_0025089 3300048907 Bacteria 5494
79 Ga0496105_0049233 3300048908 Bacteria 3479
80 Ga0496108_0000238 3300048911 Bacteria 49319
81 Ga0496112_0258115 3300048915 Bacteria 1693
82 Ga0496114_0098489 3300048917 Unclassified 2493
83 Ga0496115_0026035 3300048918 Bacteria 4561
84 Ga0496115_0040368 3300048918 Bacteria 3710
85 Ga0501031_0181268 3300049568 Bacteria 1376
86 Ga0501032_0018805 3300049569 Bacteria 4835
87 Ga0501032_0035758 3300049569 Bacteria 3394
88 Ga0501033_0007179 3300049570 Bacteria 8694
89 Ga0501033_0010327 3300049570 Bacteria 7167
90 Ga0501034_0027513 3300049571 Bacteria 5785
91 Ga0501036_0053126 3300049572 Bacteria 3432
92 Ga0501037_0018581 3300049573 Bacteria 5123
93 Ga0501037_0062085 3300049573 Bacteria 2724
94 Ga0501038_0028273 3300049574 Bacteria 4981
95 Ga0501038_0070134 3300049574 Bacteria 2976
96 Ga0501039_0010287 3300049575 Bacteria 7135
97 Ga0501039_0302587 3300049575 Bacteria 1257
98 Ga0501043_0041876 3300049579 Bacteria 3598
99 Ga0501043_0108323 3300049579 Bacteria 2182
100 Ga0501046_0100881 3300049580 Bacteria 2214
101 Ga0501046_0144430 3300049580 Bacteria 1798
102 Ga0501047_0046994 3300049581 Bacteria 4171
103 Ga0501047_0089384 3300049581 Bacteria 2957
104 Ga0501067_0149916 3300049583 Bacteria 1299
105 Ga0501068_0036575 3300049584 Bacteria 2936
106 Ga0501069_0148824 3300049585 Unclassified 1345
107 Ga0501069_0170509 3300049585 Bacteria 1255
108 Ga0501071_0085982 3300049587 Bacteria 2306
109 Ga0501073_0023094 3300049589 Bacteria 4471
110 Ga0501073_0064498 3300049589 Bacteria 2554
111 Ga0501074_0039709 3300049590 Bacteria 3408
112 Ga0501074_0212139 3300049590 Bacteria 1379
113 Ga0501076_0006658 3300049592 Bacteria 8381
114 Ga0501077_0108313 3300049593 Bacteria 1760
115 Ga0501080_0021770 3300049742 Bacteria 5938
116 Ga0501080_0070708 3300049742 Unclassified 3246
117 Ga0501083_0042842 3300049744 Bacteria 3068
118 Ga0501083_0221784 3300049744 Bacteria 1232
119 Ga0501035_0054839 3300049822 Bacteria 3560
120 Ga0501035_0200739 3300049822 Bacteria 1710
121 Ga0501044_0078435 3300049823 Bacteria 3347
122 Ga0501044_0101022 3300049823 Bacteria 2902
123 Ga0501045_0029136 3300049824 Bacteria 3988
124 nmdc:mga0a205_322976_c1 3300050515 Bacteria 1414
125 Ga0500643_000303 3300053087 Bacteria 41173
126 Ga0500643_013216 3300053087 Bacteria 2924
127 Ga0500644_0049969 3300053088 Bacteria 1429
128 Ga0500651_0136982 3300053093 Bacteria 1478
129 Ga0500654_089009 3300053099 Bacteria 1388
130 Ga0500594_0006191 3300053118 Bacteria 2682
131 Ga0500620_000262 3300053155 Bacteria 10276
132 Ga0501084_0019290 3300054114 Bacteria 5681
133 Ga0501082_0160574 3300060353 Unclassified 1953
134 Ga0530510_0050903 3300061734 Bacteria 2992
135 2586057617 2585427649 Bacteria 9053857
136 2644111576 2643221619 Bacteria 4158469
137 2676494566 2675903060 Bacteria 10051191
138 2772644539 2772190715 Bacteria 6959372
139 2791912517 2791354901 Bacteria 8322202
140 2816422780 2816332119 Bacteria 8120218
141 2831940102 2831935698 Bacteria 5963223
142 2832008688 2832004796 Bacteria 6538017
143 2855674579 2855670206 Bacteria 7120389
144 2855678283 2855676851 Bacteria 7063653
145 2857291787 2857288857 Bacteria 7189066
146 2858855047 2858848962 Bacteria 6963058
147 2858885992 2858882152 Bacteria 7230291
148 2858889295 2858888857 Bacteria 7060307
149 2858900506 2858895516 Bacteria 7378898
150 2866070835 2866065130 Bacteria 6518152
151 2866612260 2866612099 Bacteria 7543886
152 2867305289 2867302475 Bacteria 7087181
153 2867318431 2867312974 Bacteria 7058875
154 2867320415 2867319477 Bacteria 7069771
155 2867507920 2867507094 Bacteria 6506033
156 2869049461 2869048445 Bacteria 6875584
157 2869067356 2869061728 Bacteria 7112407
158 2869073657 2869068681 Bacteria 7205615
159 2880492383 2880489317 Bacteria 7096270
160 2880499918 2880495981 Bacteria 7340502
161 2915771470 2915768154 Bacteria 8424322
162 2917745098 2917736166 Bacteria 9690793
163 2929221822 2929219909 Bacteria 6984360
164 2929228484 2929226422 Bacteria 7248583
165 3003001562 3002998708 Bacteria 11715108
166 8003832453 8003830390 Bacteria 6541657
167 8003875710 8003870546 Bacteria 7396674
168 8054707348 8054704163 Bacteria 7247792
169 8054728781 8054727385 Bacteria 7558670
170 8054738453 8054734606 Bacteria 6947278
171 Ga0496109_0067896
172 JGI25406J46586_10003464
173 Ga0070658_10077199
174 Ga0070666_10003009
175 Ga0070668_100001353
176 Ga0070711_100357847
177 Ga0070708_100006059
178 Ga0070679_100171263
179 Ga0070697_100001456
180 Ga0068853_100292307
181 Ga0068858_100024537
182 Ga0068860_100075028
183 Ga0081455_10170135
184 Ga0081540_1011518
185 Ga0081539_10000177
186 Ga0081539_10002088
187 Ga0081539_10004279
188 Ga0081539_10131705
189 Ga0070717_10022872
190 Ga0075428_100008673
191 Ga0068865_100011826
192 Ga0105245_10134225
193 Ga0209148_1000564
194 Ga0209455_1000640
195 Ga0207680_10043958
196 Ga0207650_10150040
197 Ga0207704_10007454
198 Ga0207668_10004972
199 Ga0207668_10013888
200 Ga0207658_10051988
201 Ga0207703_10139927
202 Ga0207639_10265267
203 Ga0207675_100215707
204 Ga0268264_10083380
205 Ga0307515_10014706
206 Ga0307515_10125119
207 Ga0265338_10001753
208 Ga0307512_10003327
209 Ga0307512_10005213
210 Ga0307512_10025506
211 Ga0316182_1192976
212 Ga0307513_10011076
213 Ga0307509_10245095
214 Ga0307508_10002281
215 Ga0307508_10003754
216 Ga0307508_10083329
217 Ga0265314_10077857
218 Ga0265314_10089674
219 Ga0307516_10000020
220 Ga0307516_10005848
221 Ga0307516_10020231
222 Ga0307518_10000334
223 Ga0307409_100062179
224 Ga0307416_100315692
225 Ga0307507_10028390
226 Ga0307507_10238619
227 Ga0373950_0001032
228 Ga0373938_0016474
229 Ga0373951_0000021
230 Ga0373932_0024984
231 Ga0373941_0013019
232 Ga0373942_0000213
233 Ga0373962_0012891
234 Ga0373937_0000154
235 Ga0395900_0014504
236 Ga0395898_0042352
237 Ga0436364_1414098
238 Ga0395901_0079446
239 Ga0395901_0251759
240 Ga0451853_1424406
241 Ga0451577_0168023
242 Ga0466966_0158835
243 Ga0453684_0017023
244 Ga0466968_0080019
245 Ga0495672_0006950
246 Ga0495672_0144256
247 Ga0496104_0000829
248 Ga0496104_0025089
249 Ga0496105_0049233
250 Ga0496108_0000238
251 Ga0496112_0258115
252 Ga0496114_0098489
253 Ga0496115_0026035
254 Ga0496115_0040368
255 Ga0501031_0181268
256 Ga0501032_0018805
257 Ga0501032_0035758
258 Ga0501033_0007179
259 Ga0501033_0010327
260 Ga0501034_0027513
261 Ga0501036_0053126
262 Ga0501037_0018581
263 Ga0501037_0062085
264 Ga0501038_0028273
265 Ga0501038_0070134
266 Ga0501039_0010287
267 Ga0501039_0302587
268 Ga0501043_0041876
269 Ga0501043_0108323
270 Ga0501046_0100881
271 Ga0501046_0144430
272 Ga0501047_0046994
273 Ga0501047_0089384
274 Ga0501067_0149916
275 Ga0501068_0036575
276 Ga0501069_0148824
277 Ga0501069_0170509
278 Ga0501071_0085982
279 Ga0501073_0023094
280 Ga0501073_0064498
281 Ga0501074_0039709
282 Ga0501074_0212139
283 Ga0501076_0006658
284 Ga0501077_0108313
285 Ga0501080_0021770
286 Ga0501080_0070708
287 Ga0501083_0042842
288 Ga0501083_0221784
289 Ga0501035_0054839
290 Ga0501035_0200739
291 Ga0501044_0078435
292 Ga0501044_0101022
293 Ga0501045_0029136
294 nmdc:mga0a205_322976_c1
295 Ga0500643_000303
296 Ga0500643_013216
297 Ga0500644_0049969
298 Ga0500651_0136982
299 Ga0500654_089009
300 Ga0500594_0006191
301 Ga0500620_000262
302 Ga0501084_0019290
303 Ga0501082_0160574
304 Ga0530510_0050903
305 2586057617
306 2644111576
307 2676494566
308 2772644539
309 2791912517
310 2816422780
311 2831940102
312 2832008688
313 2855674579
314 2855678283
315 2857291787
316 2858855047
317 2858885992
318 2858889295
319 2858900506
320 2866070835
321 2866612260
322 2867305289
323 2867318431
324 2867320415
325 2867507920
326 2869049461
327 2869067356
328 2869073657
329 2880492383
330 2880499918
331 2915771470
332 2917745098
333 2929221822
334 2929228484
335 3003001562
336 8003832453
337 8003875710
338 8054707348
339 8054728781
340 8054738453

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03102

NeuB

NeuB family

52

292

0.98

PF08666

SAF

SAF domain

305

363

0.98

Structural Annotation

Top 5 Hits

ID Description Score Start End
6ncs-assembly1.cif.gz_B crystal structure of n-acetylneuraminic acid (sialic acid) synthetase from leptospira borgpetersenii serovar hardjo-bovis in complex with citrate 0.9378 2 289
8h2c-assembly2.cif.gz_C crystal structure of the pseudaminic acid synthase psei from campylobacter jejuni 0.9104 5 349
8h2c-assembly1.cif.gz_B crystal structure of the pseudaminic acid synthase psei from campylobacter jejuni 0.9064 5 349
1wvo-assembly1.cif.gz_A solution structure of rsgi ruh-029, an antifreeze protein like domain in human n-acetylneuraminic acid phosphate synthase gene. 0.9055 294 348
8h2c-assembly2.cif.gz_C crystal structure of the pseudaminic acid synthase psei from campylobacter jejuni 0.9054 5 349
ID Description Score Start End Superfamily
af_Q58465_3_262_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.951 4 276 3.20.20.70
af_Q58465_3_262_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9367 4 276 3.20.20.70
af_Q99J77_9_276_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9159 8 277 3.20.20.70
2wqpA01 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9121 5 283 3.20.20.70
af_Q99J77_9_276_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9094 8 277 3.20.20.70
ID Description Score Start End GO Terms
AF-A0A4Y7U3F0-F1-model_v4 Pseudaminic acid synthase 0.9984 105 193 GO:0016051
GO:0047444
GO:0070085
AF-A0A4R7VN12-F1-model_v4 N-acetylneuraminate synthase 0.9961 1 349 GO:0016051
GO:0047444
GO:0070085
AF-X1J4S4-F1-model_v4 N-acetylneuraminic acid synthase N-terminal domain-containing protein 0.995 129 191 GO:0016051
GO:0047444
GO:0070085
AF-A0A562IF79-F1-model_v4 Pseudaminic acid synthase 0.9919 2 349 GO:0016051
GO:0047444
GO:0070085
AF-A0A4R9BDC9-F1-model_v4 Pseudaminic acid synthase (EC 2.5.1.97) 0.9904 5 349 GO:0016051
GO:0047444
GO:0070085

Map