F257058
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 170 | 134 | 170 | 151 |
Family's Representative Sequence
| Representative Sequence | 3300031649|Ga0307514_10426273|Ga0307514_104262731 |
| Length | 177 |
| Sequence | MAAKNPAAGTAPPRSASGYDLRPLTIDERSKYAATLTPEEREVILHQGTERPFCGTLLNNKKAGVYACRLCGLPLFKADAKFESGTGWPSFYEPIDPSHVAEIVDDSHGMSRTEIRCRRCDGHLGHVFNDGPPPTRQRYCLNSLSLEFYPEGSTPVQRMSGAGFEPATGSSLSPEKS |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300005329 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG | Metagenome | Rhizosphere |
| 2 | 3300005334 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 | Metagenome | Rhizosphere |
| 3 | 3300005336 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG | Metagenome | Rhizosphere |
| 4 | 3300005339 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG | Metagenome | Rhizosphere |
| 5 | 3300005343 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG | Metagenome | Rhizosphere |
| 6 | 3300005345 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG | Metagenome | Rhizosphere |
| 7 | 3300005365 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG | Metagenome | Rhizosphere |
| 8 | 3300005366 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG | Metagenome | Rhizosphere |
| 9 | 3300005439 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG | Metagenome | Rhizosphere |
| 10 | 3300005444 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG | Metagenome | Rhizosphere |
| 11 | 3300005456 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG | Metagenome | Rhizosphere |
| 12 | 3300005458 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG | Metagenome | Rhizosphere |
| 13 | 3300005459 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 | Metagenome | Rhizosphere |
| 14 | 3300005466 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG | Metagenome | Rhizosphere |
| 15 | 3300005530 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG | Metagenome | Rhizosphere |
| 16 | 3300005539 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 | Metagenome | Rhizosphere |
| 17 | 3300005548 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG | Metagenome | Rhizosphere |
| 18 | 3300005549 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG | Metagenome | Rhizosphere |
| 19 | 3300005563 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 | Metagenome | Rhizosphere |
| 20 | 3300005564 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG | Metagenome | Rhizosphere |
| 21 | 3300005577 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 | Metagenome | Rhizosphere |
| 22 | 3300005578 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 | Metagenome | Rhizosphere |
| 23 | 3300005614 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 | Metagenome | Rhizosphere |
| 24 | 3300005618 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 | Metagenome | Rhizosphere |
| 25 | 3300005841 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 | Metagenome | Rhizosphere |
| 26 | 3300006028 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG | Metagenome | Rhizosphere |
| 27 | 3300006237 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 28 | 3300006358 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 | Metagenome | Rhizosphere |
| 29 | 3300006846 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 | Metagenome | Rhizosphere |
| 30 | 3300006880 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 | Metagenome | Rhizosphere |
| 31 | 3300009093 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG | Metagenome | Rhizosphere |
| 32 | 3300009098 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG | Metagenome | Rhizosphere |
| 33 | 3300009148 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG | Metagenome | Rhizosphere |
| 34 | 3300009174 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG | Metagenome | Rhizosphere |
| 35 | 3300009177 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG | Metagenome | Rhizosphere |
| 36 | 3300009551 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG | Metagenome | Rhizosphere |
| 37 | 3300009553 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG | Metagenome | Rhizosphere |
| 38 | 3300013100 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG | Metagenome | Rhizosphere |
| 39 | 3300013104 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG | Metagenome | Rhizosphere |
| 40 | 3300013105 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG | Metagenome | Rhizosphere |
| 41 | 3300013296 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG | Metagenome | Rhizosphere |
| 42 | 3300013297 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG | Metagenome | Rhizosphere |
| 43 | 3300013308 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG | Metagenome | Rhizosphere |
| 44 | 3300014968 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG | Metagenome | Rhizosphere |
| 45 | 3300014969 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG | Metagenome | Rhizosphere |
| 46 | 3300021384 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 | Metagenome | Unclassified |
| 47 | 3300025909 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 48 | 3300025910 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 49 | 3300025912 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 50 | 3300025913 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 51 | 3300025918 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 52 | 3300025921 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 53 | 3300025927 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 54 | 3300025937 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 55 | 3300025942 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 56 | 3300025949 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 57 | 3300025961 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 58 | 3300026041 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 59 | 3300026078 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 60 | 3300026095 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 61 | 3300026116 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 62 | 3300026121 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 63 | 3300028379 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 64 | 3300028794 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM | Metagenome | Unclassified |
| 65 | 3300028800 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG | Metagenome | Rhizosphere |
| 66 | 3300031456 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM | Metagenome | Unclassified |
| 67 | 3300031649 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM | Metagenome | Unclassified |
| 68 | 3300031711 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG | Metagenome | Rhizosphere |
| 69 | 3300031730 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM | Metagenome | Unclassified |
| 70 | 3300031824 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 | Metagenome | Rhizosphere |
| 71 | 3300031901 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 | Metagenome | Rhizosphere |
| 72 | 3300031903 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 | Metagenome | Rhizosphere |
| 73 | 3300032005 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 | Metagenome | Rhizosphere |
| 74 | 3300032126 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 | Metagenome | Rhizosphere |
| 75 | 3300035090 | Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_2 | Metagenome | Rhizosphere |
| 76 | 3300036401 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 | Metagenome | Rhizosphere |
| 77 | 3300037312 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 | Metagenome | Rhizosphere |
| 78 | 3300037418 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 | Metagenome | Rhizosphere |
| 79 | 3300037466 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 | Metagenome | Rhizosphere |
| 80 | 3300037471 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 | Metagenome | Rhizosphere |
| 81 | 3300038443 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 | Metagenome | Rhizosphere |
| 82 | 3300039437 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 | Metagenome | Unclassified |
| 83 | 3300039450 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 | Metagenome | Unclassified |
| 84 | 3300039453 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 | Metagenome | Rhizosphere |
| 85 | 3300041507 | White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_10 MetaG | Metagenome | Unclassified |
| 86 | 3300044712 | Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED | Metagenome | Rhizosphere |
| 87 | 3300045051 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED | Metagenome | Rhizosphere |
| 88 | 3300046460 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere | Metagenome | Rhizosphere |
| 89 | 3300046462 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere | Metagenome | Rhizosphere |
| 90 | 3300046499 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere | Metagenome | Rhizosphere |
| 91 | 3300046516 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere | Metagenome | Rhizosphere |
| 92 | 3300046519 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere | Metagenome | Rhizosphere |
| 93 | 3300046809 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere | Metagenome | Rhizosphere |
| 94 | 3300047472 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere | Metagenome | Rhizosphere |
| 95 | 3300048908 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 | Metagenome | Rhizoplane |
| 96 | 3300048913 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 | Metagenome | Rhizoplane |
| 97 | 3300048917 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 | Metagenome | Rhizoplane |
| 98 | 3300048918 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 | Metagenome | Rhizoplane |
| 99 | 3300049515 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F22_B_5_drought | Metagenome | Rhizosphere |
| 100 | 3300049522 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C24_B_7_control | Metagenome | Rhizosphere |
| 101 | 3300049568 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 102 | 3300049569 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 103 | 3300049572 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 104 | 3300049578 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 105 | 3300049581 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 106 | 3300049586 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 | Metagenome | Rhizosphere |
| 107 | 3300049660 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D2_B_0_control | Metagenome | Rhizosphere |
| 108 | 3300049661 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_B_0_control | Metagenome | Rhizosphere |
| 109 | 3300049665 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H4_A_2_drought | Metagenome | Rhizosphere |
| 110 | 3300049667 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G5_B_2_control | Metagenome | Rhizosphere |
| 111 | 3300049669 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_B_2_drought | Metagenome | Rhizosphere |
| 112 | 3300049705 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought | Metagenome | Rhizosphere |
| 113 | 3300049706 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J2_B_2_control | Metagenome | Rhizosphere |
| 114 | 3300050508 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation | Metagenome | Rhizosphere |
| 115 | 3300050509 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation | Metagenome | Rhizosphere |
| 116 | 3300053080 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere | Metagenome | Endosphere |
| 117 | 3300053090 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere | Metagenome | Endosphere |
| 118 | 3300053093 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere | Metagenome | Endosphere |
| 119 | 3300053094 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere | Metagenome | Endosphere |
| 120 | 3300053095 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL3_72_14 endosphere | Metagenome | Endosphere |
| 121 | 3300053102 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 endosphere | Metagenome | Endosphere |
| 122 | 3300053111 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 endosphere | Metagenome | Endosphere |
| 123 | 3300053119 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere | Metagenome | Endosphere |
| 124 | 3300053121 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 endosphere | Metagenome | Endosphere |
| 125 | 3300053123 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere | Metagenome | Endosphere |
| 126 | 3300053130 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere | Metagenome | Endosphere |
| 127 | 3300053136 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere | Metagenome | Endosphere |
| 128 | 3300053138 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 endosphere | Metagenome | Endosphere |
| 129 | 3300053144 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 endosphere | Metagenome | Endosphere |
| 130 | 3300053156 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere | Metagenome | Endosphere |
| 131 | 3300053160 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 endosphere | Metagenome | Endosphere |
| 132 | 3300053177 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere | Metagenome | Endosphere |
| 133 | 3300053178 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere | Metagenome | Endosphere |
| 134 | 3300053737 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 endosphere | Metagenome | Endosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 100 |
| Metatranscriptomes | 0 |
| Isolates | 0 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 12.35 |
| Nodule | 0 |
| Rhizoplane | 2.35 |
| Rhizosphere | 78.82 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 6.47 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | Ga0070683_100153653 | 3300005329 | Bacteria | 2182 |
| 2 | Ga0068869_100182909 | 3300005334 | Bacteria | 1644 |
| 3 | Ga0070680_100113891 | 3300005336 | Bacteria | 2253 |
| 4 | Ga0070660_100042257 | 3300005339 | Unclassified | 3479 |
| 5 | Ga0070687_100155537 | 3300005343 | Bacteria | 1347 |
| 6 | Ga0070687_100219646 | 3300005343 | Bacteria | 1163 |
| 7 | Ga0070692_11246941 | 3300005345 | Bacteria | 531 |
| 8 | Ga0070688_101115227 | 3300005365 | Bacteria | 631 |
| 9 | Ga0070659_100881009 | 3300005366 | Bacteria | 781 |
| 10 | Ga0070711_101181968 | 3300005439 | Bacteria | 661 |
| 11 | Ga0070694_100319116 | 3300005444 | Bacteria | 1195 |
| 12 | Ga0070678_100149396 | 3300005456 | Bacteria | 1880 |
| 13 | Ga0070678_100405075 | 3300005456 | Bacteria | 1186 |
| 14 | Ga0070681_10117820 | 3300005458 | Bacteria | 2592 |
| 15 | Ga0070681_11043872 | 3300005458 | Bacteria | 738 |
| 16 | Ga0068867_101141660 | 3300005459 | Bacteria | 713 |
| 17 | Ga0070685_10270373 | 3300005466 | Bacteria | 1134 |
| 18 | Ga0070679_100012506 | 3300005530 | Bacteria | 8114 |
| 19 | Ga0070679_100048314 | 3300005530 | Bacteria | 4240 |
| 20 | Ga0070679_101686559 | 3300005530 | Bacteria | 582 |
| 21 | Ga0068853_100596365 | 3300005539 | Bacteria | 1049 |
| 22 | Ga0070665_100113115 | 3300005548 | Bacteria | 2717 |
| 23 | Ga0070704_100844079 | 3300005549 | Bacteria | 821 |
| 24 | Ga0068855_100025912 | 3300005563 | Bacteria | 7014 |
| 25 | Ga0070664_100704447 | 3300005564 | Bacteria | 941 |
| 26 | Ga0068857_100232696 | 3300005577 | Unclassified | 1686 |
| 27 | Ga0068854_100025918 | 3300005578 | Bacteria | 4025 |
| 28 | Ga0068856_100034785 | 3300005614 | Bacteria | 4935 |
| 29 | Ga0068856_100195230 | 3300005614 | Bacteria | 2038 |
| 30 | Ga0068864_100070772 | 3300005618 | Bacteria | 3036 |
| 31 | Ga0068864_100209579 | 3300005618 | Bacteria | 1794 |
| 32 | Ga0068863_100042384 | 3300005841 | Bacteria | 4325 |
| 33 | Ga0070717_10117752 | 3300006028 | Bacteria | 2272 |
| 34 | Ga0097621_100642514 | 3300006237 | Bacteria | 973 |
| 35 | Ga0097621_100721552 | 3300006237 | Bacteria | 919 |
| 36 | Ga0097621_101031609 | 3300006237 | Bacteria | 770 |
| 37 | Ga0097621_101261264 | 3300006237 | Bacteria | 697 |
| 38 | Ga0097621_101466151 | 3300006237 | Bacteria | 647 |
| 39 | Ga0068871_100319470 | 3300006358 | Bacteria | 1367 |
| 40 | Ga0068871_100990913 | 3300006358 | Bacteria | 782 |
| 41 | Ga0068871_101269247 | 3300006358 | Bacteria | 692 |
| 42 | Ga0075430_100082787 | 3300006846 | Bacteria | 2689 |
| 43 | Ga0075429_100099435 | 3300006880 | Bacteria | 2538 |
| 44 | Ga0075429_100334817 | 3300006880 | Bacteria | 1325 |
| 45 | Ga0075429_100466188 | 3300006880 | Bacteria | 1107 |
| 46 | Ga0105240_10423264 | 3300009093 | Bacteria | 1496 |
| 47 | Ga0105245_10000087 | 3300009098 | Bacteria | 92249 |
| 48 | Ga0105245_10875039 | 3300009098 | Bacteria | 939 |
| 49 | Ga0105243_10318611 | 3300009148 | Bacteria | 1416 |
| 50 | Ga0105241_10155843 | 3300009174 | Bacteria | 1873 |
| 51 | Ga0105248_10745981 | 3300009177 | Unclassified | 1105 |
| 52 | Ga0105238_10754095 | 3300009551 | Bacteria | 987 |
| 53 | Ga0105249_10513291 | 3300009553 | Bacteria | 1245 |
| 54 | Ga0157373_10043771 | 3300013100 | Unclassified | 3197 |
| 55 | Ga0157370_10226182 | 3300013104 | Bacteria | 1732 |
| 56 | Ga0157369_10082470 | 3300013105 | Bacteria | 3440 |
| 57 | Ga0157374_10159097 | 3300013296 | Bacteria | 2200 |
| 58 | Ga0157378_10117783 | 3300013297 | Bacteria | 2444 |
| 59 | Ga0157378_10948664 | 3300013297 | Bacteria | 893 |
| 60 | Ga0157375_12235939 | 3300013308 | Bacteria | 652 |
| 61 | Ga0157379_10846396 | 3300014968 | Bacteria | 865 |
| 62 | Ga0157376_10100141 | 3300014969 | Bacteria | 2530 |
| 63 | Ga0157376_10393708 | 3300014969 | Bacteria | 1338 |
| 64 | Ga0157376_11475545 | 3300014969 | Bacteria | 713 |
| 65 | Ga0213876_10482728 | 3300021384 | Bacteria | 659 |
| 66 | Ga0207705_10385529 | 3300025909 | Bacteria | 1083 |
| 67 | Ga0207684_10068706 | 3300025910 | Bacteria | 3011 |
| 68 | Ga0207707_10430098 | 3300025912 | Bacteria | 1131 |
| 69 | Ga0207707_10494393 | 3300025912 | Bacteria | 1044 |
| 70 | Ga0207695_11154300 | 3300025913 | Bacteria | 655 |
| 71 | Ga0207662_10180800 | 3300025918 | Bacteria | 1357 |
| 72 | Ga0207652_10012181 | 3300025921 | Bacteria | 6949 |
| 73 | Ga0207652_10120391 | 3300025921 | Unclassified | 2335 |
| 74 | Ga0207652_10206079 | 3300025921 | Bacteria | 1770 |
| 75 | Ga0207652_10452729 | 3300025921 | Bacteria | 1157 |
| 76 | Ga0207652_10744909 | 3300025921 | Bacteria | 872 |
| 77 | Ga0207687_10000518 | 3300025927 | Bacteria | 25945 |
| 78 | Ga0207669_10028724 | 3300025937 | Bacteria | 3064 |
| 79 | Ga0207689_10185029 | 3300025942 | Bacteria | 1718 |
| 80 | Ga0207689_11166269 | 3300025942 | Bacteria | 649 |
| 81 | Ga0207667_11055836 | 3300025949 | Bacteria | 797 |
| 82 | Ga0207712_10338038 | 3300025961 | Bacteria | 1248 |
| 83 | Ga0207639_10010602 | 3300026041 | Bacteria | 6385 |
| 84 | Ga0207702_10436206 | 3300026078 | Bacteria | 1269 |
| 85 | Ga0207676_11160961 | 3300026095 | Bacteria | 765 |
| 86 | Ga0207674_11146822 | 3300026116 | Bacteria | 747 |
| 87 | Ga0207683_10096998 | 3300026121 | Bacteria | 2629 |
| 88 | Ga0268266_10007196 | 3300028379 | Bacteria | 10075 |
| 89 | Ga0307515_10164875 | 3300028794 | Bacteria | 2239 |
| 90 | Ga0307515_10559232 | 3300028794 | Bacteria | 754 |
| 91 | Ga0265338_10036968 | 3300028800 | Bacteria | 4658 |
| 92 | Ga0265338_10046820 | 3300028800 | Bacteria | 3958 |
| 93 | Ga0307513_10048488 | 3300031456 | Bacteria | 4610 |
| 94 | Ga0307514_10426273 | 3300031649 | Bacteria | 664 |
| 95 | Ga0265314_10218421 | 3300031711 | Bacteria | 1114 |
| 96 | Ga0307516_10134276 | 3300031730 | Bacteria | 2251 |
| 97 | Ga0307516_10178749 | 3300031730 | Bacteria | 1857 |
| 98 | Ga0307413_10286503 | 3300031824 | Bacteria | 1242 |
| 99 | Ga0307406_10100569 | 3300031901 | Bacteria | 1968 |
| 100 | Ga0307407_10293531 | 3300031903 | Bacteria | 1131 |
| 101 | Ga0307411_11726626 | 3300032005 | Bacteria | 580 |
| 102 | Ga0307415_100063973 | 3300032126 | Bacteria | 2558 |
| 103 | Ga0373949_0000481 | 3300035090 | Bacteria | 13641 |
| 104 | Ga0373937_0075246 | 3300036401 | Bacteria | 3117 |
| 105 | Ga0395899_0030231 | 3300037312 | Bacteria | 4074 |
| 106 | Ga0395899_0130824 | 3300037312 | Bacteria | 1792 |
| 107 | Ga0395900_0108182 | 3300037418 | Bacteria | 2856 |
| 108 | Ga0395898_0323365 | 3300037466 | Bacteria | 1471 |
| 109 | Ga0395905_0359756 | 3300037471 | Bacteria | 1348 |
| 110 | Ga0395901_0051722 | 3300038443 | Bacteria | 4271 |
| 111 | Ga0395901_0298322 | 3300038443 | Bacteria | 1671 |
| 112 | Ga0436365_0228027 | 3300039437 | Bacteria | 3210 |
| 113 | Ga0436365_1205016 | 3300039437 | Bacteria | 2752 |
| 114 | Ga0436363_0464011 | 3300039450 | Bacteria | 1721 |
| 115 | Ga0436362_0397276 | 3300039453 | Bacteria | 621 |
| 116 | Ga0451851_0007449 | 3300041507 | Bacteria | 800 |
| 117 | Ga0453684_0524226 | 3300044712 | Bacteria | 1309 |
| 118 | Ga0451576_0623810 | 3300045051 | Bacteria | 1133 |
| 119 | Ga0495638_0016191 | 3300046460 | Bacteria | 4998 |
| 120 | Ga0495638_0248719 | 3300046460 | Bacteria | 981 |
| 121 | Ga0495651_0323210 | 3300046462 | Bacteria | 1028 |
| 122 | Ga0495594_0035776 | 3300046499 | Bacteria | 2706 |
| 123 | Ga0495628_0642243 | 3300046516 | Bacteria | 754 |
| 124 | Ga0495632_0257138 | 3300046519 | Bacteria | 782 |
| 125 | Ga0495600_0179422 | 3300046809 | Bacteria | 1365 |
| 126 | Ga0495686_0013869 | 3300047472 | Bacteria | 5577 |
| 127 | Ga0495686_0041931 | 3300047472 | Bacteria | 2913 |
| 128 | Ga0496105_0675388 | 3300048908 | Bacteria | 795 |
| 129 | Ga0496110_0986090 | 3300048913 | Bacteria | 750 |
| 130 | Ga0496114_0334065 | 3300048917 | Bacteria | 1340 |
| 131 | Ga0496115_0202354 | 3300048918 | Bacteria | 1640 |
| 132 | Ga0501292_036418 | 3300049515 | Bacteria | 839 |
| 133 | Ga0501299_002885 | 3300049522 | Bacteria | 2432 |
| 134 | Ga0501031_0228349 | 3300049568 | Bacteria | 1212 |
| 135 | Ga0501032_0396733 | 3300049569 | Bacteria | 886 |
| 136 | Ga0501036_0230378 | 3300049572 | Bacteria | 1555 |
| 137 | Ga0501042_0949709 | 3300049578 | Bacteria | 626 |
| 138 | Ga0501047_0073605 | 3300049581 | Bacteria | 3289 |
| 139 | Ga0501070_0249416 | 3300049586 | Bacteria | 1452 |
| 140 | Ga0501070_0714931 | 3300049586 | Bacteria | 791 |
| 141 | Ga0501216_000263 | 3300049660 | Bacteria | 5892 |
| 142 | Ga0501217_067748 | 3300049661 | Bacteria | 966 |
| 143 | Ga0501227_007032 | 3300049665 | Bacteria | 2409 |
| 144 | Ga0501230_022148 | 3300049667 | Bacteria | 1120 |
| 145 | Ga0501235_035181 | 3300049669 | Bacteria | 1137 |
| 146 | Ga0501225_0022115 | 3300049705 | Bacteria | 1755 |
| 147 | Ga0501229_058676 | 3300049706 | Bacteria | 582 |
| 148 | nmdc:mga09592_215683_c1 | 3300050508 | Bacteria | 1663 |
| 149 | nmdc:mga0qj67_187277_c1 | 3300050509 | Bacteria | 1681 |
| 150 | Ga0500635_0164851 | 3300053080 | Bacteria | 851 |
| 151 | Ga0500646_0091949 | 3300053090 | Bacteria | 940 |
| 152 | Ga0500651_0229193 | 3300053093 | Bacteria | 1087 |
| 153 | Ga0500566_0005444 | 3300053094 | Bacteria | 7573 |
| 154 | Ga0500566_0035994 | 3300053094 | Bacteria | 2874 |
| 155 | Ga0500640_000073 | 3300053095 | Bacteria | 16592 |
| 156 | Ga0500554_000415 | 3300053102 | Bacteria | 9020 |
| 157 | Ga0500572_000280 | 3300053111 | Bacteria | 18539 |
| 158 | Ga0500595_000100 | 3300053119 | Bacteria | 58938 |
| 159 | Ga0500607_104318 | 3300053121 | Bacteria | 1402 |
| 160 | Ga0500614_000622 | 3300053123 | Bacteria | 9027 |
| 161 | Ga0500642_0005019 | 3300053130 | Bacteria | 4219 |
| 162 | Ga0500642_0073370 | 3300053130 | Bacteria | 1560 |
| 163 | Ga0500559_0003900 | 3300053136 | Bacteria | 7209 |
| 164 | Ga0500564_154434 | 3300053138 | Bacteria | 976 |
| 165 | Ga0500585_166848 | 3300053144 | Bacteria | 757 |
| 166 | Ga0500622_0130523 | 3300053156 | Bacteria | 1208 |
| 167 | Ga0500633_0139005 | 3300053160 | Bacteria | 909 |
| 168 | Ga0500636_0146223 | 3300053177 | Bacteria | 1303 |
| 169 | Ga0500637_0474396 | 3300053178 | Bacteria | 628 |
| 170 | Ga0500601_010462 | 3300053737 | Bacteria | 1039 |
Family Sequences
| Sample | Scaffold | Protein | Protein Length | |
|---|---|---|---|---|
| 1 | 3300046499 | Ga0495594_0035776 | Ga0495594_0035776_2256_2690 | 130 |
| 2 | 3300005365 | Ga0070688_101115227 | Ga0070688_1011152271 | 142 |
| 3 | 3300006880 | Ga0075429_100099435 | Ga0075429_1000994352 | 142 |
| 4 | 3300006880 | Ga0075429_100334817 | Ga0075429_1003348172 | 142 |
| 5 | 3300006880 | Ga0075429_100466188 | Ga0075429_1004661882 | 142 |
| 6 | 3300050508 | nmdc:mga09592_215683_c1 | nmdc:mga09592_215683_c1_369_797 | 142 |
| 7 | 3300005618 | Ga0068864_100070772 | Ga0068864_1000707722 | 144 |
| 8 | 3300006358 | Ga0068871_100319470 | Ga0068871_1003194702 | 147 |
| 9 | 3300021384 | Ga0213876_10482728 | Ga0213876_104827281 | 147 |
| 10 | 3300025921 | Ga0207652_10452729 | Ga0207652_104527291 | 147 |
| 11 | 3300039437 | Ga0436365_0228027 | Ga0436365_0228027_1906_2352 | 147 |
| 12 | 3300039437 | Ga0436365_1205016 | Ga0436365_1205016_1070_1513 | 147 |
| 13 | 3300005329 | Ga0070683_100153653 | Ga0070683_1001536532 | 148 |
| 14 | 3300005334 | Ga0068869_100182909 | Ga0068869_1001829092 | 148 |
| 15 | 3300005336 | Ga0070680_100113891 | Ga0070680_1001138912 | 148 |
| 16 | 3300005339 | Ga0070660_100042257 | Ga0070660_1000422574 | 148 |
| 17 | 3300005343 | Ga0070687_100155537 | Ga0070687_1001555372 | 148 |
| 18 | 3300005343 | Ga0070687_100219646 | Ga0070687_1002196462 | 148 |
| 19 | 3300005345 | Ga0070692_11246941 | Ga0070692_112469411 | 148 |
| 20 | 3300005366 | Ga0070659_100881009 | Ga0070659_1008810092 | 148 |
| 21 | 3300005439 | Ga0070711_101181968 | Ga0070711_1011819681 | 148 |
| 22 | 3300005444 | Ga0070694_100319116 | Ga0070694_1003191161 | 148 |
| 23 | 3300005456 | Ga0070678_100149396 | Ga0070678_1001493962 | 148 |
| 24 | 3300005456 | Ga0070678_100405075 | Ga0070678_1004050751 | 148 |
| 25 | 3300005458 | Ga0070681_10117820 | Ga0070681_101178202 | 148 |
| 26 | 3300005458 | Ga0070681_11043872 | Ga0070681_110438721 | 148 |
| 27 | 3300005459 | Ga0068867_101141660 | Ga0068867_1011416601 | 148 |
| 28 | 3300005466 | Ga0070685_10270373 | Ga0070685_102703732 | 148 |
| 29 | 3300005530 | Ga0070679_100012506 | Ga0070679_1000125062 | 148 |
| 30 | 3300005530 | Ga0070679_100048314 | Ga0070679_1000483145 | 148 |
| 31 | 3300005530 | Ga0070679_101686559 | Ga0070679_1016865591 | 148 |
| 32 | 3300005539 | Ga0068853_100596365 | Ga0068853_1005963652 | 148 |
| 33 | 3300005548 | Ga0070665_100113115 | Ga0070665_1001131153 | 148 |
| 34 | 3300005549 | Ga0070704_100844079 | Ga0070704_1008440791 | 148 |
| 35 | 3300005563 | Ga0068855_100025912 | Ga0068855_1000259127 | 148 |
| 36 | 3300005564 | Ga0070664_100704447 | Ga0070664_1007044472 | 148 |
| 37 | 3300005577 | Ga0068857_100232696 | Ga0068857_1002326962 | 148 |
| 38 | 3300005578 | Ga0068854_100025918 | Ga0068854_1000259183 | 148 |
| 39 | 3300005614 | Ga0068856_100034785 | Ga0068856_1000347852 | 148 |
| 40 | 3300005614 | Ga0068856_100195230 | Ga0068856_1001952304 | 148 |
| 41 | 3300005618 | Ga0068864_100209579 | Ga0068864_1002095792 | 148 |
| 42 | 3300005841 | Ga0068863_100042384 | Ga0068863_1000423843 | 148 |
| 43 | 3300006028 | Ga0070717_10117752 | Ga0070717_101177523 | 148 |
| 44 | 3300006237 | Ga0097621_100642514 | Ga0097621_1006425142 | 148 |
| 45 | 3300006237 | Ga0097621_100721552 | Ga0097621_1007215521 | 148 |
| 46 | 3300006237 | Ga0097621_101031609 | Ga0097621_1010316091 | 148 |
| 47 | 3300006237 | Ga0097621_101261264 | Ga0097621_1012612642 | 148 |
| 48 | 3300006237 | Ga0097621_101466151 | Ga0097621_1014661511 | 148 |
| 49 | 3300006358 | Ga0068871_100990913 | Ga0068871_1009909132 | 148 |
| 50 | 3300006358 | Ga0068871_101269247 | Ga0068871_1012692472 | 148 |
| 51 | 3300006846 | Ga0075430_100082787 | Ga0075430_1000827873 | 148 |
| 52 | 3300009093 | Ga0105240_10423264 | Ga0105240_104232642 | 148 |
| 53 | 3300009098 | Ga0105245_10000087 | Ga0105245_1000008766 | 148 |
| 54 | 3300009098 | Ga0105245_10875039 | Ga0105245_108750392 | 148 |
| 55 | 3300009148 | Ga0105243_10318611 | Ga0105243_103186111 | 148 |
| 56 | 3300009174 | Ga0105241_10155843 | Ga0105241_101558433 | 148 |
| 57 | 3300009177 | Ga0105248_10745981 | Ga0105248_107459811 | 148 |
| 58 | 3300009551 | Ga0105238_10754095 | Ga0105238_107540952 | 148 |
| 59 | 3300009553 | Ga0105249_10513291 | Ga0105249_105132912 | 148 |
| 60 | 3300013100 | Ga0157373_10043771 | Ga0157373_100437714 | 148 |
| 61 | 3300013104 | Ga0157370_10226182 | Ga0157370_102261822 | 148 |
| 62 | 3300013105 | Ga0157369_10082470 | Ga0157369_100824704 | 148 |
| 63 | 3300013296 | Ga0157374_10159097 | Ga0157374_101590973 | 148 |
| 64 | 3300013297 | Ga0157378_10117783 | Ga0157378_101177832 | 148 |
| 65 | 3300013297 | Ga0157378_10948664 | Ga0157378_109486642 | 148 |
| 66 | 3300013308 | Ga0157375_12235939 | Ga0157375_122359391 | 148 |
| 67 | 3300014968 | Ga0157379_10846396 | Ga0157379_108463961 | 148 |
| 68 | 3300014969 | Ga0157376_10100141 | Ga0157376_101001412 | 148 |
| 69 | 3300014969 | Ga0157376_10393708 | Ga0157376_103937082 | 148 |
| 70 | 3300014969 | Ga0157376_11475545 | Ga0157376_114755452 | 148 |
| 71 | 3300025909 | Ga0207705_10385529 | Ga0207705_103855292 | 148 |
| 72 | 3300025910 | Ga0207684_10068706 | Ga0207684_100687062 | 148 |
| 73 | 3300025912 | Ga0207707_10430098 | Ga0207707_104300981 | 148 |
| 74 | 3300025912 | Ga0207707_10494393 | Ga0207707_104943932 | 148 |
| 75 | 3300025913 | Ga0207695_11154300 | Ga0207695_111543001 | 148 |
| 76 | 3300025918 | Ga0207662_10180800 | Ga0207662_101808002 | 148 |
| 77 | 3300025921 | Ga0207652_10012181 | Ga0207652_100121816 | 148 |
| 78 | 3300025921 | Ga0207652_10120391 | Ga0207652_101203914 | 148 |
| 79 | 3300025921 | Ga0207652_10206079 | Ga0207652_102060792 | 148 |
| 80 | 3300025921 | Ga0207652_10744909 | Ga0207652_107449091 | 148 |
| 81 | 3300025927 | Ga0207687_10000518 | Ga0207687_100005184 | 148 |
| 82 | 3300025937 | Ga0207669_10028724 | Ga0207669_100287242 | 148 |
| 83 | 3300025942 | Ga0207689_10185029 | Ga0207689_101850293 | 148 |
| 84 | 3300025942 | Ga0207689_11166269 | Ga0207689_111662692 | 148 |
| 85 | 3300025949 | Ga0207667_11055836 | Ga0207667_110558361 | 148 |
| 86 | 3300025961 | Ga0207712_10338038 | Ga0207712_103380382 | 148 |
| 87 | 3300026041 | Ga0207639_10010602 | Ga0207639_100106023 | 148 |
| 88 | 3300026078 | Ga0207702_10436206 | Ga0207702_104362062 | 148 |
| 89 | 3300026095 | Ga0207676_11160961 | Ga0207676_111609611 | 148 |
| 90 | 3300026116 | Ga0207674_11146822 | Ga0207674_111468221 | 148 |
| 91 | 3300026121 | Ga0207683_10096998 | Ga0207683_100969983 | 148 |
| 92 | 3300028379 | Ga0268266_10007196 | Ga0268266_100071962 | 148 |
| 93 | 3300028794 | Ga0307515_10164875 | Ga0307515_101648752 | 148 |
| 94 | 3300028794 | Ga0307515_10559232 | Ga0307515_105592321 | 148 |
| 95 | 3300028800 | Ga0265338_10036968 | Ga0265338_100369682 | 148 |
| 96 | 3300028800 | Ga0265338_10046820 | Ga0265338_100468203 | 148 |
| 97 | 3300031456 | Ga0307513_10048488 | Ga0307513_100484882 | 148 |
| 98 | 3300031649 | Ga0307514_10426273 | Ga0307514_104262731 | 148 |
| 99 | 3300031711 | Ga0265314_10218421 | Ga0265314_102184212 | 148 |
| 100 | 3300031730 | Ga0307516_10134276 | Ga0307516_101342763 | 148 |
| 101 | 3300031730 | Ga0307516_10178749 | Ga0307516_101787492 | 148 |
| 102 | 3300031824 | Ga0307413_10286503 | Ga0307413_102865032 | 148 |
| 103 | 3300031901 | Ga0307406_10100569 | Ga0307406_101005692 | 148 |
| 104 | 3300031903 | Ga0307407_10293531 | Ga0307407_102935312 | 148 |
| 105 | 3300032005 | Ga0307411_11726626 | Ga0307411_117266261 | 148 |
| 106 | 3300032126 | Ga0307415_100063973 | Ga0307415_1000639733 | 148 |
| 107 | 3300035090 | Ga0373949_0000481 | Ga0373949_0000481_12020_12520 | 148 |
| 108 | 3300036401 | Ga0373937_0075246 | Ga0373937_0075246_2534_3007 | 148 |
| 109 | 3300037312 | Ga0395899_0030231 | Ga0395899_0030231_2130_2576 | 148 |
| 110 | 3300037312 | Ga0395899_0130824 | Ga0395899_0130824_559_1005 | 148 |
| 111 | 3300037418 | Ga0395900_0108182 | Ga0395900_0108182_263_709 | 148 |
| 112 | 3300037466 | Ga0395898_0323365 | Ga0395898_0323365_557_1003 | 148 |
| 113 | 3300037471 | Ga0395905_0359756 | Ga0395905_0359756_495_941 | 148 |
| 114 | 3300038443 | Ga0395901_0051722 | Ga0395901_0051722_647_1093 | 148 |
| 115 | 3300038443 | Ga0395901_0298322 | Ga0395901_0298322_257_703 | 148 |
| 116 | 3300039450 | Ga0436363_0464011 | Ga0436363_0464011_854_1300 | 148 |
| 117 | 3300039453 | Ga0436362_0397276 | Ga0436362_0397276_69_515 | 148 |
| 118 | 3300041507 | Ga0451851_0007449 | Ga0451851_0007449_99_572 | 148 |
| 119 | 3300044712 | Ga0453684_0524226 | Ga0453684_0524226_135_581 | 148 |
| 120 | 3300045051 | Ga0451576_0623810 | Ga0451576_0623810_178_624 | 148 |
| 121 | 3300046460 | Ga0495638_0016191 | Ga0495638_0016191_4209_4682 | 148 |
| 122 | 3300046460 | Ga0495638_0248719 | Ga0495638_0248719_101_547 | 148 |
| 123 | 3300046462 | Ga0495651_0323210 | Ga0495651_0323210_267_740 | 148 |
| 124 | 3300046516 | Ga0495628_0642243 | Ga0495628_0642243_188_661 | 148 |
| 125 | 3300046519 | Ga0495632_0257138 | Ga0495632_0257138_172_618 | 148 |
| 126 | 3300046809 | Ga0495600_0179422 | Ga0495600_0179422_749_1222 | 148 |
| 127 | 3300047472 | Ga0495686_0013869 | Ga0495686_0013869_2931_3377 | 148 |
| 128 | 3300047472 | Ga0495686_0041931 | Ga0495686_0041931_2089_2547 | 148 |
| 129 | 3300048908 | Ga0496105_0675388 | Ga0496105_0675388_218_664 | 148 |
| 130 | 3300048913 | Ga0496110_0986090 | Ga0496110_0986090_244_702 | 148 |
| 131 | 3300048917 | Ga0496114_0334065 | Ga0496114_0334065_857_1315 | 148 |
| 132 | 3300048918 | Ga0496115_0202354 | Ga0496115_0202354_80_526 | 148 |
| 133 | 3300049515 | Ga0501292_036418 | Ga0501292_036418_107_553 | 148 |
| 134 | 3300049522 | Ga0501299_002885 | Ga0501299_002885_335_781 | 148 |
| 135 | 3300049568 | Ga0501031_0228349 | Ga0501031_0228349_119_565 | 148 |
| 136 | 3300049569 | Ga0501032_0396733 | Ga0501032_0396733_152_598 | 148 |
| 137 | 3300049572 | Ga0501036_0230378 | Ga0501036_0230378_496_942 | 148 |
| 138 | 3300049578 | Ga0501042_0949709 | Ga0501042_0949709_10_474 | 148 |
| 139 | 3300049581 | Ga0501047_0073605 | Ga0501047_0073605_1727_2173 | 148 |
| 140 | 3300049586 | Ga0501070_0249416 | Ga0501070_0249416_165_611 | 148 |
| 141 | 3300049586 | Ga0501070_0714931 | Ga0501070_0714931_303_749 | 148 |
| 142 | 3300049660 | Ga0501216_000263 | Ga0501216_000263_3827_4273 | 148 |
| 143 | 3300049661 | Ga0501217_067748 | Ga0501217_067748_262_708 | 148 |
| 144 | 3300049665 | Ga0501227_007032 | Ga0501227_007032_563_1009 | 148 |
| 145 | 3300049667 | Ga0501230_022148 | Ga0501230_022148_607_1053 | 148 |
| 146 | 3300049669 | Ga0501235_035181 | Ga0501235_035181_68_514 | 148 |
| 147 | 3300049705 | Ga0501225_0022115 | Ga0501225_0022115_969_1415 | 148 |
| 148 | 3300049706 | Ga0501229_058676 | Ga0501229_058676_42_488 | 148 |
| 149 | 3300050509 | nmdc:mga0qj67_187277_c1 | nmdc:mga0qj67_187277_c1_1218_1664 | 148 |
| 150 | 3300053080 | Ga0500635_0164851 | Ga0500635_0164851_287_733 | 148 |
| 151 | 3300053090 | Ga0500646_0091949 | Ga0500646_0091949_391_837 | 148 |
| 152 | 3300053093 | Ga0500651_0229193 | Ga0500651_0229193_11_457 | 148 |
| 153 | 3300053094 | Ga0500566_0005444 | Ga0500566_0005444_1670_2116 | 148 |
| 154 | 3300053094 | Ga0500566_0035994 | Ga0500566_0035994_1687_2133 | 148 |
| 155 | 3300053095 | Ga0500640_000073 | Ga0500640_000073_947_1393 | 148 |
| 156 | 3300053102 | Ga0500554_000415 | Ga0500554_000415_7202_7648 | 148 |
| 157 | 3300053111 | Ga0500572_000280 | Ga0500572_000280_4052_4498 | 148 |
| 158 | 3300053119 | Ga0500595_000100 | Ga0500595_000100_29928_30374 | 148 |
| 159 | 3300053121 | Ga0500607_104318 | Ga0500607_104318_208_654 | 148 |
| 160 | 3300053123 | Ga0500614_000622 | Ga0500614_000622_1098_1544 | 148 |
| 161 | 3300053130 | Ga0500642_0005019 | Ga0500642_0005019_1982_2455 | 148 |
| 162 | 3300053130 | Ga0500642_0073370 | Ga0500642_0073370_620_1066 | 148 |
| 163 | 3300053136 | Ga0500559_0003900 | Ga0500559_0003900_5576_6022 | 148 |
| 164 | 3300053138 | Ga0500564_154434 | Ga0500564_154434_38_484 | 148 |
| 165 | 3300053144 | Ga0500585_166848 | Ga0500585_166848_170_616 | 148 |
| 166 | 3300053156 | Ga0500622_0130523 | Ga0500622_0130523_333_779 | 148 |
| 167 | 3300053160 | Ga0500633_0139005 | Ga0500633_0139005_313_759 | 148 |
| 168 | 3300053177 | Ga0500636_0146223 | Ga0500636_0146223_846_1292 | 148 |
| 169 | 3300053178 | Ga0500637_0474396 | Ga0500637_0474396_134_580 | 148 |
| 170 | 3300053737 | Ga0500601_010462 | Ga0500601_010462_322_768 | 148 |
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 3hci-assembly2.cif.gz_B | structure of msrb from xanthomonas campestris (complex-like form) | 0.8262 | 8 | 144 |
| 3hcj-assembly2.cif.gz_B | structure of msrb from xanthomonas campestris (oxidized form) | 0.8151 | 8 | 144 |
| 3e0o-assembly2.cif.gz_A | crystal structure of msrb | 0.7837 | 13 | 139 |
| 7cto-assembly1.cif.gz_A | staphylococcus aureus msrb | 0.783 | 24 | 140 |
| 7cto-assembly5.cif.gz_E | staphylococcus aureus msrb | 0.7829 | 25 | 140 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| 3hcjB01 | Mainly Beta;Beta Complex;Metal Binding Protein, Guanine Nucleotide Exchange Factor; Chain A;Peptide methionine sulfoxide reductase. | 0.8033 | 14 | 144 | 2.170.150.20 |
| 3e0oC00 | Mainly Beta;Beta Complex;Metal Binding Protein, Guanine Nucleotide Exchange Factor; Chain A;Peptide methionine sulfoxide reductase. | 0.7899 | 18 | 139 | 2.170.150.20 |
| 3cezB00 | Mainly Beta;Beta Complex;Metal Binding Protein, Guanine Nucleotide Exchange Factor; Chain A;Peptide methionine sulfoxide reductase. | 0.7838 | 12 | 139 | 2.170.150.20 |
| 3maoA00 | Mainly Beta;Beta Complex;Metal Binding Protein, Guanine Nucleotide Exchange Factor; Chain A;Peptide methionine sulfoxide reductase. | 0.7773 | 48 | 145 | 2.170.150.20 |
| af_I6YA00_1_135_2.170.150.20 | Mainly Beta;Beta Complex;Metal Binding Protein, Guanine Nucleotide Exchange Factor; Chain A;Peptide methionine sulfoxide reductase. | 0.7759 | 9 | 141 | 2.170.150.20 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A371WM61-F1-model_v4 | Peptide methionine sulfoxide reductase MsrB (EC 1.8.4.12) (Peptide-methionine (R)-S-oxide reductase) | 0.8577 | 1 | 148 |
GO:0005737
GO:0006979 GO:0008270 GO:0030091 GO:0033743 |
| AF-A0A357EY38-F1-model_v4 | Peptide methionine sulfoxide reductase MsrB (EC 1.8.4.12) (Peptide-methionine (R)-S-oxide reductase) | 0.8556 | 2 | 148 |
GO:0005737
GO:0006979 GO:0008270 GO:0030091 GO:0033743 |
| AF-A0A371WM61-F1-model_v4 | Peptide methionine sulfoxide reductase MsrB (EC 1.8.4.12) (Peptide-methionine (R)-S-oxide reductase) | 0.8523 | 1 | 148 |
GO:0005737
GO:0006979 GO:0008270 GO:0030091 GO:0033743 |
| AF-A0A2L0EI60-F1-model_v4 | peptide-methionine (R)-S-oxide reductase (EC 1.8.4.12) | 0.852 | 2 | 145 |
GO:0005737
GO:0006979 GO:0030091 GO:0033743 |
| AF-A0A3D0JYU4-F1-model_v4 | peptide-methionine (R)-S-oxide reductase (EC 1.8.4.12) | 0.8496 | 2 | 145 |
GO:0005737
GO:0006979 GO:0008113 GO:0030091 GO:0033743 |
Predicted Structure (AlphaFold2)
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