F253881

General Info

Members Datasets Scaffolds Average Seq Length
169 121 338 323

Family's Representative Sequence

Representative Sequence 3300003373|JGI25407J50210_10001611|JGI25407J50210_100016117
Length 333
Sequence VRQGWSWKYPDAVADDLLGRVEEHIRRRGLIEPGGEVTCLVSGGADSTTLWHSLRELGYAVSALHVNHHLRGKESDEDARFCAEVFGAEVVDAPGATEADLRELRYSFATDRLRATGHTASDQVETILYRLVSSGKPGGIKAKREDGVVRPLLGVWRAETEAYCRDAGLPFRVDSSNRETKRGLIRERVLPLLRELDPRAEKNLLALAEGRPSPLDALLESAAGSARVDLGGGLQAIREYDRVWLERSPVALDGEVRWGPWRIRSDVPGLRVRGWRAGDRLAGRRKKLQDVFVDAKVPRSEREAWPLVVRGDEVVAVPGIVEAEGVHAEYVQD

Samples

Sample ID Description Type Environment
1 3300003373 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
2 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
3 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
4 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
5 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
6 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
7 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
8 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
9 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
10 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
11 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
12 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
13 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
14 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
15 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
16 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
17 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
18 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
19 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
20 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
21 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
22 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
23 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
24 3300020081 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
25 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
26 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
27 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
28 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
29 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
30 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
33 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
34 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
35 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
36 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
37 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
38 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
39 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
40 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
41 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
42 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
43 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
44 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
45 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
46 3300038996 Genetically engineered switchgrass root microbial communities from Knoxville, USA - plot19 Metagenome Rhizosphere
47 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
48 3300041453 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_6 MetaG Metagenome Rhizoplane
49 3300041460 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_12 MetaG Metagenome Rhizoplane
50 3300041496 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_4 MetaG Metagenome Unclassified
51 3300041505 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_9 MetaG Metagenome Unclassified
52 3300042530 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0530L_E14_082316_2047 Metagenome Rhizosphere
53 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
54 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
55 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
56 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
57 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
58 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
59 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
60 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
61 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
62 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
63 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
64 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
65 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
66 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
67 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
68 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
69 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
70 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
71 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
72 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
73 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
74 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
75 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
76 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
77 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
78 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
79 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
80 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
81 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
82 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
83 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
84 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
85 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
86 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
87 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
88 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
89 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
90 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
91 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
92 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
93 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
94 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
95 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
96 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
97 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
98 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
99 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
100 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
101 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
102 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
103 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
104 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
105 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
106 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
107 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
108 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
109 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
110 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
111 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
112 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
113 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
114 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
115 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
116 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
117 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
118 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
119 3300059421 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 6_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
120 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
121 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.41
Metatranscriptomes 0.59
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.55
Nodule 0
Rhizoplane 10.65
Rhizosphere 84.62
Stem 0
Stem Tuber 0
Unclassified 4.14

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25407J50210_10001611 3300003373 Bacteria 5154
2 Ga0070658_10017256 3300005327 Bacteria 5777
3 Ga0070690_100306821 3300005330 Unclassified 1140
4 Ga0070682_100290930 3300005337 Unclassified 1195
5 Ga0070660_100042588 3300005339 Bacteria 3466
6 Ga0070714_100004907 3300005435 Bacteria 10160
7 Ga0081455_10024682 3300005937 Bacteria 5562
8 Ga0081455_10026587 3300005937 Bacteria 5318
9 Ga0081538_10000455 3300005981 Bacteria 45816
10 Ga0081538_10001433 3300005981 Bacteria 24526
11 Ga0081538_10079679 3300005981 Bacteria 1751
12 Ga0070717_10130352 3300006028 Bacteria 2162
13 Ga0075365_10004289 3300006038 Bacteria 7528
14 Ga0075364_10002692 3300006051 Bacteria 9980
15 Ga0075432_10002286 3300006058 Bacteria 6380
16 Ga0075432_10021218 3300006058 Bacteria 2220
17 Ga0075362_10012293 3300006177 Bacteria 3398
18 Ga0075431_100022824 3300006847 Bacteria 6396
19 Ga0075433_10001302 3300006852 Bacteria 18258
20 Ga0075433_10144590 3300006852 Bacteria 2114
21 Ga0075434_100000978 3300006871 Bacteria 23072
22 Ga0075429_100009980 3300006880 Bacteria 8229
23 Ga0075436_100144518 3300006914 Bacteria 1672
24 Ga0075435_100007065 3300007076 Bacteria 7970
25 Ga0105240_10004372 3300009093 Bacteria 21577
26 Ga0105240_10264448 3300009093 Bacteria 1983
27 Ga0111539_10016863 3300009094 Bacteria 9046
28 Ga0111539_10100796 3300009094 Bacteria 3390
29 Ga0157369_10036233 3300013105 Bacteria 5405
30 Ga0157369_10045651 3300013105 Bacteria 4763
31 Ga0157369_10189013 3300013105 Bacteria 2164
32 Ga0182008_10051409 3300014497 Unclassified 2044
33 Ga0206354_11326805 3300020081 Bacteria 1305
34 Ga0207699_10106943 3300025906 Bacteria 1786
35 Ga0207695_10260218 3300025913 Bacteria 1633
36 Ga0207693_10052149 3300025915 Bacteria 3209
37 Ga0207660_10094895 3300025917 Bacteria 2218
38 Ga0207646_10150457 3300025922 Bacteria 2099
39 Ga0207664_10088171 3300025929 Bacteria 2538
40 Ga0207664_10304729 3300025929 Bacteria 1402
41 Ga0207665_10006727 3300025939 Bacteria 7622
42 Ga0207428_10004307 3300027907 Bacteria 13589
43 Ga0265319_1028788 3300028563 Bacteria 1956
44 Ga0265336_10003969 3300028666 Bacteria 5667
45 Ga0265338_10184469 3300028800 Bacteria 1587
46 Ga0373945_0045734 3300035116 Bacteria 1595
47 Ga0373954_0137083 3300035118 Bacteria 1193
48 Ga0373935_0031718 3300035692 Bacteria 3281
49 Ga0373947_0013787 3300035725 Bacteria 4633
50 Ga0373925_0013710 3300037068 Bacteria 5868
51 Ga0395899_0001122 3300037312 Bacteria 23915
52 Ga0395899_0002410 3300037312 Bacteria 15195
53 Ga0395899_0002803 3300037312 Bacteria 14046
54 Ga0395899_0008176 3300037312 Bacteria 8059
55 Ga0395900_0014093 3300037418 Bacteria 8161
56 Ga0395900_0034012 3300037418 Bacteria 5246
57 Ga0395900_0037084 3300037418 Bacteria 5027
58 Ga0395900_0108513 3300037418 Bacteria 2851
59 Ga0395900_0171465 3300037418 Bacteria 2208
60 Ga0395900_0268263 3300037418 Bacteria 1702
61 Ga0395898_0009734 3300037466 Bacteria 10079
62 Ga0395898_0021218 3300037466 Bacteria 6589
63 Ga0395898_0077773 3300037466 Bacteria 3202
64 Ga0395905_0006711 3300037471 Bacteria 11524
65 Ga0395905_0054608 3300037471 Bacteria 3738
66 Ga0395905_0117418 3300037471 Bacteria 2500
67 Ga0395905_0146381 3300037471 Bacteria 2222
68 Ga0395901_0001102 3300038443 Bacteria 28752
69 Ga0395901_0001138 3300038443 Bacteria 28189
70 Ga0395901_0003433 3300038443 Bacteria 15969
71 Ga0395901_0017523 3300038443 Bacteria 7310
72 Ga0395901_0027153 3300038443 Bacteria 5880
73 Ga0395901_0078225 3300038443 Bacteria 3453
74 Ga0395901_0178978 3300038443 Bacteria 2224
75 Ga0242420_010265 3300038996 Bacteria 1552
76 Ga0451793_1038079 3300041452 Bacteria 2456
77 Ga0451797_0100709 3300041453 Bacteria 1891
78 Ga0451802_0229365 3300041460 Bacteria 1373
79 Ga0451839_0174904 3300041496 Bacteria 1502
80 Ga0451849_0981873 3300041505 Bacteria 1428
81 Ga0450916_001871 3300042530 Bacteria 2160
82 Ga0466965_0084744 3300044683 Bacteria 1606
83 Ga0466964_0017275 3300044706 Bacteria 2760
84 Ga0466971_0012945 3300044719 Bacteria 3659
85 Ga0466968_0001590 3300044735 Bacteria 8189
86 Ga0466968_0017077 3300044735 Bacteria 2896
87 Ga0466958_0069449 3300045836 Bacteria 2154
88 Ga0466958_0163098 3300045836 Bacteria 1409
89 Ga0466967_0000857 3300045976 Bacteria 16157
90 Ga0466967_0345982 3300045976 Bacteria 1438
91 Ga0495629_0004952 3300046459 Bacteria 9989
92 Ga0495629_0147776 3300046459 Bacteria 1634
93 Ga0495608_0103140 3300046511 Bacteria 1838
94 Ga0495618_0149233 3300046514 Bacteria 1494
95 Ga0495630_0015569 3300046517 Bacteria 5555
96 Ga0495630_0069860 3300046517 Bacteria 2642
97 Ga0495630_0198885 3300046517 Bacteria 1529
98 Ga0495586_0034838 3300046535 Bacteria 2704
99 Ga0495586_0062327 3300046535 Bacteria 2030
100 Ga0495587_0129948 3300046536 Bacteria 1440
101 Ga0495634_0020719 3300046642 Bacteria 4659
102 Ga0495634_0050637 3300046642 Bacteria 2787
103 Ga0495657_0019102 3300046675 Bacteria 4950
104 Ga0495658_0076072 3300046683 Bacteria 1961
105 Ga0495613_0190365 3300046689 Bacteria 1450
106 Ga0495604_0316124 3300047317 Bacteria 1045
107 Ga0495674_0146548 3300047319 Bacteria 1981
108 Ga0495675_0148517 3300047444 Bacteria 1449
109 Ga0495602_0078515 3300048088 Bacteria 2788
110 Ga0496101_0098632 3300048904 Bacteria 2183
111 Ga0496104_0162433 3300048907 Bacteria 2142
112 Ga0496106_0011810 3300048909 Bacteria 6447
113 Ga0496107_0011281 3300048910 Bacteria 6220
114 Ga0496107_0243093 3300048910 Bacteria 1339
115 Ga0496108_0003242 3300048911 Bacteria 13082
116 Ga0496108_0060428 3300048911 Bacteria 3189
117 Ga0496109_0007345 3300048912 Bacteria 9320
118 Ga0496110_0012110 3300048913 Bacteria 7086
119 Ga0496111_0006491 3300048914 Bacteria 7598
120 Ga0496111_0154520 3300048914 Bacteria 1702
121 Ga0496112_0129107 3300048915 Bacteria 2498
122 Ga0496113_0150263 3300048916 Bacteria 1837
123 Ga0496113_0304142 3300048916 Bacteria 1277
124 Ga0496114_0018481 3300048917 Bacteria 5637
125 Ga0501032_0023588 3300049569 Bacteria 4247
126 Ga0501033_0017911 3300049570 Bacteria 5348
127 Ga0501036_0015322 3300049572 Bacteria 6402
128 Ga0501037_0000692 3300049573 Bacteria 25682
129 Ga0501038_0008937 3300049574 Bacteria 9191
130 Ga0501039_0026601 3300049575 Bacteria 4445
131 Ga0501042_0024547 3300049578 Bacteria 4229
132 Ga0501043_0010720 3300049579 Bacteria 7181
133 Ga0501046_0007886 3300049580 Bacteria 9328
134 Ga0501046_0250438 3300049580 Bacteria 1304
135 Ga0501067_0006580 3300049583 Bacteria 6441
136 Ga0501068_0002777 3300049584 Bacteria 9305
137 Ga0501069_0002329 3300049585 Bacteria 9598
138 Ga0501069_0035419 3300049585 Bacteria 2750
139 Ga0501070_0012929 3300049586 Bacteria 7034
140 Ga0501071_0015288 3300049587 Bacteria 5267
141 Ga0501072_0097614 3300049588 Unclassified 2335
142 Ga0501075_0376941 3300049591 Bacteria 1081
143 Ga0501076_0214960 3300049592 Bacteria 1572
144 Ga0501079_0038147 3300049741 Bacteria 3705
145 Ga0501079_0234543 3300049741 Bacteria 1434
146 Ga0501080_0016193 3300049742 Bacteria 6883
147 Ga0501081_0040371 3300049743 Bacteria 3195
148 Ga0501035_0023436 3300049822 Bacteria 5662
149 Ga0501045_0247770 3300049824 Bacteria 1326
150 nmdc:mga03683_2148_c1 3300050489 Bacteria 6078
151 nmdc:mga00v17_2772_c1 3300050491 Bacteria 8994
152 nmdc:mga0k408_111976_c1 3300050493 Bacteria 1613
153 nmdc:mga05p37_26846_c1 3300050507 Bacteria 7006
154 nmdc:mga09592_50870_c1 3300050508 Bacteria 3495
155 nmdc:mga0qj67_11345_c1 3300050509 Bacteria 6675
156 nmdc:mga06r32_79805_c1 3300050510 Bacteria 3184
157 nmdc:mga08y16_12070_c1 3300050511 Bacteria 9078
158 nmdc:mga08y16_25275_c1 3300050511 Bacteria 6261
159 nmdc:mga0n895_1293_c1 3300050512 Bacteria 18530
160 nmdc:mga0rr50_11576_c1 3300050513 Bacteria 5655
161 nmdc:mga0rr50_45265_c1 3300050513 Bacteria 3233
162 nmdc:mga08x19_90466_c1 3300050514 Bacteria 2019
163 nmdc:mga0a205_112515_c1 3300050515 Bacteria 2622
164 nmdc:mga0a205_7474_c1 3300050515 Bacteria 9893
165 Ga0501084_0125841 3300054114 Unclassified 2156
166 Ga0590071_022090 3300059421 Unclassified 1501
167 Ga0501082_0148203 3300060353 Bacteria 2038
168 Ga0501082_0212975 3300060353 Bacteria 1681
169 Ga0530510_0043881 3300061734 Unclassified 3230
170 JGI25407J50210_10001611
171 Ga0070658_10017256
172 Ga0070690_100306821
173 Ga0070682_100290930
174 Ga0070660_100042588
175 Ga0070714_100004907
176 Ga0081455_10024682
177 Ga0081455_10026587
178 Ga0081538_10000455
179 Ga0081538_10001433
180 Ga0081538_10079679
181 Ga0070717_10130352
182 Ga0075365_10004289
183 Ga0075364_10002692
184 Ga0075432_10002286
185 Ga0075432_10021218
186 Ga0075362_10012293
187 Ga0075431_100022824
188 Ga0075433_10001302
189 Ga0075433_10144590
190 Ga0075434_100000978
191 Ga0075429_100009980
192 Ga0075436_100144518
193 Ga0075435_100007065
194 Ga0105240_10004372
195 Ga0105240_10264448
196 Ga0111539_10016863
197 Ga0111539_10100796
198 Ga0157369_10036233
199 Ga0157369_10045651
200 Ga0157369_10189013
201 Ga0182008_10051409
202 Ga0206354_11326805
203 Ga0207699_10106943
204 Ga0207695_10260218
205 Ga0207693_10052149
206 Ga0207660_10094895
207 Ga0207646_10150457
208 Ga0207664_10088171
209 Ga0207664_10304729
210 Ga0207665_10006727
211 Ga0207428_10004307
212 Ga0265319_1028788
213 Ga0265336_10003969
214 Ga0265338_10184469
215 Ga0373945_0045734
216 Ga0373954_0137083
217 Ga0373935_0031718
218 Ga0373947_0013787
219 Ga0373925_0013710
220 Ga0395899_0001122
221 Ga0395899_0002410
222 Ga0395899_0002803
223 Ga0395899_0008176
224 Ga0395900_0014093
225 Ga0395900_0034012
226 Ga0395900_0037084
227 Ga0395900_0108513
228 Ga0395900_0171465
229 Ga0395900_0268263
230 Ga0395898_0009734
231 Ga0395898_0021218
232 Ga0395898_0077773
233 Ga0395905_0006711
234 Ga0395905_0054608
235 Ga0395905_0117418
236 Ga0395905_0146381
237 Ga0395901_0001102
238 Ga0395901_0001138
239 Ga0395901_0003433
240 Ga0395901_0017523
241 Ga0395901_0027153
242 Ga0395901_0078225
243 Ga0395901_0178978
244 Ga0242420_010265
245 Ga0451793_1038079
246 Ga0451797_0100709
247 Ga0451802_0229365
248 Ga0451839_0174904
249 Ga0451849_0981873
250 Ga0450916_001871
251 Ga0466965_0084744
252 Ga0466964_0017275
253 Ga0466971_0012945
254 Ga0466968_0001590
255 Ga0466968_0017077
256 Ga0466958_0069449
257 Ga0466958_0163098
258 Ga0466967_0000857
259 Ga0466967_0345982
260 Ga0495629_0004952
261 Ga0495629_0147776
262 Ga0495608_0103140
263 Ga0495618_0149233
264 Ga0495630_0015569
265 Ga0495630_0069860
266 Ga0495630_0198885
267 Ga0495586_0034838
268 Ga0495586_0062327
269 Ga0495587_0129948
270 Ga0495634_0020719
271 Ga0495634_0050637
272 Ga0495657_0019102
273 Ga0495658_0076072
274 Ga0495613_0190365
275 Ga0495604_0316124
276 Ga0495674_0146548
277 Ga0495675_0148517
278 Ga0495602_0078515
279 Ga0496101_0098632
280 Ga0496104_0162433
281 Ga0496106_0011810
282 Ga0496107_0011281
283 Ga0496107_0243093
284 Ga0496108_0003242
285 Ga0496108_0060428
286 Ga0496109_0007345
287 Ga0496110_0012110
288 Ga0496111_0006491
289 Ga0496111_0154520
290 Ga0496112_0129107
291 Ga0496113_0150263
292 Ga0496113_0304142
293 Ga0496114_0018481
294 Ga0501032_0023588
295 Ga0501033_0017911
296 Ga0501036_0015322
297 Ga0501037_0000692
298 Ga0501038_0008937
299 Ga0501039_0026601
300 Ga0501042_0024547
301 Ga0501043_0010720
302 Ga0501046_0007886
303 Ga0501046_0250438
304 Ga0501067_0006580
305 Ga0501068_0002777
306 Ga0501069_0002329
307 Ga0501069_0035419
308 Ga0501070_0012929
309 Ga0501071_0015288
310 Ga0501072_0097614
311 Ga0501075_0376941
312 Ga0501076_0214960
313 Ga0501079_0038147
314 Ga0501079_0234543
315 Ga0501080_0016193
316 Ga0501081_0040371
317 Ga0501035_0023436
318 Ga0501045_0247770
319 nmdc:mga03683_2148_c1
320 nmdc:mga00v17_2772_c1
321 nmdc:mga0k408_111976_c1
322 nmdc:mga05p37_26846_c1
323 nmdc:mga09592_50870_c1
324 nmdc:mga0qj67_11345_c1
325 nmdc:mga06r32_79805_c1
326 nmdc:mga08y16_12070_c1
327 nmdc:mga08y16_25275_c1
328 nmdc:mga0n895_1293_c1
329 nmdc:mga0rr50_11576_c1
330 nmdc:mga0rr50_45265_c1
331 nmdc:mga08x19_90466_c1
332 nmdc:mga0a205_112515_c1
333 nmdc:mga0a205_7474_c1
334 Ga0501084_0125841
335 Ga0590071_022090
336 Ga0501082_0148203
337 Ga0501082_0212975
338 Ga0530510_0043881

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF11734

TilS_C

TilS substrate C-terminal domain

270

332

0.88

PF01171

ATP_bind_3

PP-loop family

36

188

0.86

Structural Annotation

Top 5 Hits

ID Description Score Start End
5ztb-assembly3.cif.gz_C structure of sulfurtransferase 0.8142 15 212
5ztb-assembly2.cif.gz_A structure of sulfurtransferase 0.8021 15 214
5mkq-assembly1.cif.gz_B ttua enzyme containing a [4fe-4s] 0.8002 15 209
5b4f-assembly1.cif.gz_A-2 sulfur transferase ttua in complex with iron sulfur cluster 0.7994 15 205
1wy5-assembly1.cif.gz_A crystal structure of isoluecyl-trna lysidine synthetase 0.799 15 222
ID Description Score Start End Superfamily
af_P9WG53_6_202_3.40.50.620 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.8526 13 195 3.40.50.620
1wy5B01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.8288 17 197 3.40.50.620
af_Q2G0R2_4_228_3.40.50.620 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.8185 30 218 3.40.50.620
af_K7LES9_77_324_3.40.50.620 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.8102 26 209 3.40.50.620
af_A0A1D8PEQ9_77_318_2.130.10.10 Mainly Beta;7 Propeller;Methylamine Dehydrogenase; Chain H;YVTN repeat-like/Quinoprotein amine dehydrogenase 0.7954 225 247 2.130.10.10
ID Description Score Start End GO Terms
AF-A0A7W0UDD7-F1-model_v4 tRNA(Ile)-lysidine synthetase (EC 6.3.4.19) 0.9767 18 212 GO:0005524
GO:0005737
GO:0006400
GO:0032267
AF-A0A7W1H244-F1-model_v4 tRNA(Ile)-lysidine synthetase (EC 6.3.4.19) 0.9646 13 159 GO:0005524
GO:0006400
GO:0016879
AF-E5X1G3-F1-model_v4 tRNA(Ile)-lysidine synthase (EC 6.3.4.19) (tRNA(Ile)-2-lysyl-cytidine synthase) (tRNA(Ile)-lysidine synthetase) 0.9164 17 209 GO:0005524
GO:0005737
GO:0006400
GO:0032267
AF-A0A7W1H244-F1-model_v4 tRNA(Ile)-lysidine synthetase (EC 6.3.4.19) 0.9157 13 159 GO:0005524
GO:0006400
GO:0016879
AF-A0A538FE34-F1-model_v4 tRNA(Ile)-lysidine synthetase (EC 6.3.4.19) 0.907 1 151 GO:0005524
GO:0006400
GO:0032267

Map